BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042809
(241 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 101/197 (51%), Gaps = 17/197 (8%)
Query: 48 IFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGILHC------DLKCNNVLLGS 101
I MEY+ GGS LD+ E G LD I +EIL G LH D+K NVLL
Sbjct: 102 IIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE 159
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCM 161
HG+VKL D G A ++ D + N + GT WMAPEV++ D DIWSLG
Sbjct: 160 HGEVKLADFGVAGQLTDTQIKRN------TFVGTPFWMAPEVIKQSAYDSKADIWSLGIT 213
Query: 162 VIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSA 221
IE+A G PP + +L + N P + K + +F+ CL ++P R +A
Sbjct: 214 AIELARGEPPHSEL---HPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTA 270
Query: 222 EELLNHTFISGNAKKNS 238
+ELL H FI NAKK S
Sbjct: 271 KELLKHKFILRNAKKTS 287
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 101/197 (51%), Gaps = 17/197 (8%)
Query: 48 IFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGILHC------DLKCNNVLLGS 101
I MEY+ GGS LD+ E G LD I +EIL G LH D+K NVLL
Sbjct: 82 IIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE 139
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCM 161
HG+VKL D G A ++ D + N + GT WMAPEV++ D DIWSLG
Sbjct: 140 HGEVKLADFGVAGQLTDTQIKRN------TFVGTPFWMAPEVIKQSAYDSKADIWSLGIT 193
Query: 162 VIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSA 221
IE+A G PP + +L + N P + K + +F+ CL ++P R +A
Sbjct: 194 AIELARGEPPHSEL---HPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTA 250
Query: 222 EELLNHTFISGNAKKNS 238
+ELL H FI NAKK S
Sbjct: 251 KELLKHKFILRNAKKTS 267
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 128 bits (321), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 100/197 (50%), Gaps = 17/197 (8%)
Query: 48 IFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGILHC------DLKCNNVLLGS 101
I MEY+ GGS LD+ E G LD I +EIL G LH D+K NVLL
Sbjct: 97 IIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE 154
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCM 161
HG+VKL D G A ++ D + N GT WMAPEV++ D DIWSLG
Sbjct: 155 HGEVKLADFGVAGQLTDTQIKRN------XFVGTPFWMAPEVIKQSAYDSKADIWSLGIT 208
Query: 162 VIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSA 221
IE+A G PP + +L + N P + K + +F+ CL ++P R +A
Sbjct: 209 AIELARGEPPHSEL---HPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTA 265
Query: 222 EELLNHTFISGNAKKNS 238
+ELL H FI NAKK S
Sbjct: 266 KELLKHKFILRNAKKTS 282
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 127 bits (320), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 100/197 (50%), Gaps = 17/197 (8%)
Query: 48 IFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGILHC------DLKCNNVLLGS 101
I MEY+ GGS LD+ E G LD I +EIL G LH D+K NVLL
Sbjct: 82 IIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE 139
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCM 161
HG+VKL D G A ++ D + N GT WMAPEV++ D DIWSLG
Sbjct: 140 HGEVKLADFGVAGQLTDTQIKRN------XFVGTPFWMAPEVIKQSAYDSKADIWSLGIT 193
Query: 162 VIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSA 221
IE+A G PP + +L + N P + K + +F+ CL ++P R +A
Sbjct: 194 AIELARGEPPHSEL---HPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTA 250
Query: 222 EELLNHTFISGNAKKNS 238
+ELL H FI NAKK S
Sbjct: 251 KELLKHKFILRNAKKTS 267
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 96/197 (48%), Gaps = 17/197 (8%)
Query: 48 IFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGILHC------DLKCNNVLLGS 101
I MEY+ GGS LD+ G D I KEIL G LH D+K NVLL
Sbjct: 98 IIMEYLGGGSALDLLR--AGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSE 155
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCM 161
GDVKL D G A ++ D + N + GT WMAPEV++ D DIWSLG
Sbjct: 156 QGDVKLADFGVAGQLTDTQIKRN------TFVGTPFWMAPEVIQQSAYDSKADIWSLGIT 209
Query: 162 VIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSA 221
IE+A G PP D +L + N P F K +F+ CL + P R +A
Sbjct: 210 AIELAKGEPPNSDM---HPMRVLFLIPKNNPPTLVGDFTKSFKEFIDACLNKDPSFRPTA 266
Query: 222 EELLNHTFISGNAKKNS 238
+ELL H FI N+KK S
Sbjct: 267 KELLKHKFIVKNSKKTS 283
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 106/226 (46%), Gaps = 22/226 (9%)
Query: 24 RNEAEIRQSLNSPNIGRNGEKTVN-----IFMEYMAGGSLLDVAEKFGGTLDAGVIRLYT 78
+ E + +SP I R + I MEY+ GGS LD+ + G L+ I
Sbjct: 65 QQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKP--GPLEETYIATIL 122
Query: 79 KEILHGNGILHC------DLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSI 132
+EIL G LH D+K NVLL GDVKL D G A ++ D + N
Sbjct: 123 REILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN------XF 176
Query: 133 GGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEK 192
GT WMAPEV++ DF DIWSLG IE+A G PP D +L + N
Sbjct: 177 VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDL---HPMRVLFLIPKNSP 233
Query: 193 PHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNS 238
P Q K +F+ CL + P R +A+ELL H FI+ KK S
Sbjct: 234 PTLEGQHSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTKKTS 279
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 120/243 (49%), Gaps = 22/243 (9%)
Query: 1 MNKGTGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGRN-GEKTVN----IFMEYMAG 55
++K TG + +K E+ +Q + E I Q +SP++ + G N I MEY
Sbjct: 49 IHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGA 108
Query: 56 GSLLDVAEKFGGTLD----AGVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPD 109
GS+ D+ TL A +++ K E LH +H D+K N+LL + G KL D
Sbjct: 109 GSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLAD 168
Query: 110 LGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGR 169
G A ++ D N + GT WMAPEV++ G + DIWSLG IEMA G+
Sbjct: 169 FGVAGQLTDXMAKRN------XVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
Query: 170 PPWGDKISNAAATLLKIACSNEKPHF--PTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227
PP+ D A ++ +N P F P + DF+ +CL + PE+R +A +LL H
Sbjct: 223 PPYADIHPMRAIFMIP---TNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279
Query: 228 TFI 230
F+
Sbjct: 280 PFV 282
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 124/255 (48%), Gaps = 28/255 (10%)
Query: 2 NKGTGALFVVK--SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMA 54
NK T L K +SE ++ E +I S + PNI + E + I +E+ A
Sbjct: 31 NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 90
Query: 55 GGSLLDVAEKFGGTLDAGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLP 108
GG++ V + L I++ K+ LH N I+H DLK N+L GD+KL
Sbjct: 91 GGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLA 150
Query: 109 DLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-----RNEGLDFATDIWSLGCMVI 163
D G + KN Q S GT WMAPEV+ ++ D+ D+WSLG +I
Sbjct: 151 DFGVSA-----KNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLI 205
Query: 164 EMATGRPPWGDKISNAAATLLKIACSNEKPHF--PTQFFKKVLDFLAKCLERKPEKRWSA 221
EMA PP + N LLKIA S E P P+++ DFL KCLE+ + RW+
Sbjct: 206 EMAEIEPPHHE--LNPMRVLLKIAKS-EPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTT 262
Query: 222 EELLNHTFISGNAKK 236
+LL H F++ ++ K
Sbjct: 263 SQLLQHPFVTVDSNK 277
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 121 bits (303), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 124/255 (48%), Gaps = 29/255 (11%)
Query: 2 NKGTGALFVVK--SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMA 54
NK T L K +SE ++ E +I S + PNI + E + I +E+ A
Sbjct: 58 NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 117
Query: 55 GGSLLDVAEKFGGTLDAGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLP 108
GG++ V + L I++ K+ LH N I+H DLK N+L GD+KL
Sbjct: 118 GGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLA 177
Query: 109 DLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-----RNEGLDFATDIWSLGCMVI 163
D G + + N Q S GT WMAPEV+ ++ D+ D+WSLG +I
Sbjct: 178 DFGVSAK------NTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLI 231
Query: 164 EMATGRPPWGDKISNAAATLLKIACSNEKPHF--PTQFFKKVLDFLAKCLERKPEKRWSA 221
EMA PP + N LLKIA S E P P+++ DFL KCLE+ + RW+
Sbjct: 232 EMAEIEPPHHE--LNPMRVLLKIAKS-EPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTT 288
Query: 222 EELLNHTFISGNAKK 236
+LL H F++ ++ K
Sbjct: 289 SQLLQHPFVTVDSNK 303
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 120 bits (302), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 124/255 (48%), Gaps = 29/255 (11%)
Query: 2 NKGTGALFVVK--SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMA 54
NK T L K +SE ++ E +I S + PNI + E + I +E+ A
Sbjct: 58 NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 117
Query: 55 GGSLLDVAEKFGGTLDAGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLP 108
GG++ V + L I++ K+ LH N I+H DLK N+L GD+KL
Sbjct: 118 GGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLA 177
Query: 109 DLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-----RNEGLDFATDIWSLGCMVI 163
D G + + N Q S GT WMAPEV+ ++ D+ D+WSLG +I
Sbjct: 178 DFGVSAK------NTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLI 231
Query: 164 EMATGRPPWGDKISNAAATLLKIACSNEKPHF--PTQFFKKVLDFLAKCLERKPEKRWSA 221
EMA PP + N LLKIA S E P P+++ DFL KCLE+ + RW+
Sbjct: 232 EMAEIEPPHHE--LNPMRVLLKIAKS-EPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTT 288
Query: 222 EELLNHTFISGNAKK 236
+LL H F++ ++ K
Sbjct: 289 SQLLQHPFVTVDSNK 303
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 120 bits (300), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 102/192 (53%), Gaps = 21/192 (10%)
Query: 48 IFMEYMAGGSLLDVAEKFGGTLDAGVIR------LYTKEILHGNGILHCDLKCNNVLLGS 101
+ MEY+AGGSL DV + +D G I L E LH N ++H D+K +N+LLG
Sbjct: 94 VVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM 151
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQS-IGGTQLWMAPEVLRNEGLDFATDIWSLGC 160
G VKL D G ++ +QS +S + GT WMAPEV+ + DIWSLG
Sbjct: 152 DGSVKLTDFGFCAQITP-------EQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 161 MVIEMATGRPPWGDKISNAAATLLKIACSNEKPHF--PTQFFKKVLDFLAKCLERKPEKR 218
M IEM G PP+ ++ N L IA +N P P + DFL +CLE EKR
Sbjct: 205 MAIEMIEGEPPYLNE--NPLRALYLIA-TNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR 261
Query: 219 WSAEELLNHTFI 230
SA+ELL H F+
Sbjct: 262 GSAKELLQHQFL 273
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 123/255 (48%), Gaps = 29/255 (11%)
Query: 2 NKGTGALFVVK--SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMA 54
NK T L K +SE ++ E +I S + PNI + E + I +E+ A
Sbjct: 58 NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 117
Query: 55 GGSLLDVAEKFGGTLDAGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLP 108
GG++ V + L I++ K+ LH N I+H DLK N+L GD+KL
Sbjct: 118 GGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLA 177
Query: 109 DLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-----RNEGLDFATDIWSLGCMVI 163
D G + + N Q GT WMAPEV+ ++ D+ D+WSLG +I
Sbjct: 178 DFGVSAK------NTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLI 231
Query: 164 EMATGRPPWGDKISNAAATLLKIACSNEKPHF--PTQFFKKVLDFLAKCLERKPEKRWSA 221
EMA PP + N LLKIA S E P P+++ DFL KCLE+ + RW+
Sbjct: 232 EMAEIEPPHHE--LNPMRVLLKIAKS-EPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTT 288
Query: 222 EELLNHTFISGNAKK 236
+LL H F++ ++ K
Sbjct: 289 SQLLQHPFVTVDSNK 303
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 102/192 (53%), Gaps = 21/192 (10%)
Query: 48 IFMEYMAGGSLLDVAEKFGGTLDAGVIR------LYTKEILHGNGILHCDLKCNNVLLGS 101
+ MEY+AGGSL DV + +D G I L E LH N ++H D+K +N+LLG
Sbjct: 95 VVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM 152
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQS-IGGTQLWMAPEVLRNEGLDFATDIWSLGC 160
G VKL D G ++ +QS +S + GT WMAPEV+ + DIWSLG
Sbjct: 153 DGSVKLTDFGFCAQITP-------EQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 205
Query: 161 MVIEMATGRPPWGDKISNAAATLLKIACSNEKPHF--PTQFFKKVLDFLAKCLERKPEKR 218
M IEM G PP+ ++ N L IA +N P P + DFL +CLE EKR
Sbjct: 206 MAIEMIEGEPPYLNE--NPLRALYLIA-TNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR 262
Query: 219 WSAEELLNHTFI 230
SA+EL+ H F+
Sbjct: 263 GSAKELIQHQFL 274
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 102/192 (53%), Gaps = 21/192 (10%)
Query: 48 IFMEYMAGGSLLDVAEKFGGTLDAGVIR------LYTKEILHGNGILHCDLKCNNVLLGS 101
+ MEY+AGGSL DV + +D G I L E LH N ++H D+K +N+LLG
Sbjct: 94 VVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM 151
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQS-IGGTQLWMAPEVLRNEGLDFATDIWSLGC 160
G VKL D G ++ +QS +S + GT WMAPEV+ + DIWSLG
Sbjct: 152 DGSVKLTDFGFCAQITP-------EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 161 MVIEMATGRPPWGDKISNAAATLLKIACSNEKPHF--PTQFFKKVLDFLAKCLERKPEKR 218
M IEM G PP+ ++ N L IA +N P P + DFL +CL+ EKR
Sbjct: 205 MAIEMIEGEPPYLNE--NPLRALYLIA-TNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR 261
Query: 219 WSAEELLNHTFI 230
SA+ELL H F+
Sbjct: 262 GSAKELLQHQFL 273
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 102/192 (53%), Gaps = 21/192 (10%)
Query: 48 IFMEYMAGGSLLDVAEKFGGTLDAGVIR------LYTKEILHGNGILHCDLKCNNVLLGS 101
+ MEY+AGGSL DV + +D G I L E LH N ++H D+K +N+LLG
Sbjct: 94 VVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM 151
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQS-IGGTQLWMAPEVLRNEGLDFATDIWSLGC 160
G VKL D G ++ +QS +S + GT WMAPEV+ + DIWSLG
Sbjct: 152 DGSVKLTDFGFCAQITP-------EQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 161 MVIEMATGRPPWGDKISNAAATLLKIACSNEKPHF--PTQFFKKVLDFLAKCLERKPEKR 218
M IEM G PP+ ++ N L IA +N P P + DFL +CL+ EKR
Sbjct: 205 MAIEMIEGEPPYLNE--NPLRALYLIA-TNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR 261
Query: 219 WSAEELLNHTFI 230
SA+ELL H F+
Sbjct: 262 GSAKELLQHQFL 273
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 117 bits (293), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 118/238 (49%), Gaps = 27/238 (11%)
Query: 21 QALRNEAEIRQSLNSPNI-------GRNGEKTVNIFMEYMAGGSLLDVAEKFGGTL--DA 71
Q L E + + L NI NG + IFME + GGSL + G L +
Sbjct: 64 QPLHEEIALHKHLKHKNIVQYLGSFSENG--FIKIFMEQVPGGSLSALLRSKWGPLKDNE 121
Query: 72 GVIRLYTKEIL------HGNGILHCDLKCNNVLLGSH-GDVKLPDLGCARRVNDLKNNGN 124
I YTK+IL H N I+H D+K +NVL+ ++ G +K+ D G ++R+
Sbjct: 122 QTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL------AG 175
Query: 125 LKQSWQSIGGTQLWMAPEVLRN--EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAAT 182
+ ++ GT +MAPE++ G A DIWSLGC +IEMATG+PP+ + + A
Sbjct: 176 INPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE-LGEPQAA 234
Query: 183 LLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTE 240
+ K+ P P + F+ KC E P+KR A +LL F+ ++KK T+
Sbjct: 235 MFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKKKKTQ 292
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 117 bits (292), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 102/192 (53%), Gaps = 21/192 (10%)
Query: 48 IFMEYMAGGSLLDVAEKFGGTLDAGVIR------LYTKEILHGNGILHCDLKCNNVLLGS 101
+ MEY+AGGSL DV + +D G I L E LH N ++H ++K +N+LLG
Sbjct: 95 VVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLGM 152
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQS-IGGTQLWMAPEVLRNEGLDFATDIWSLGC 160
G VKL D G ++ +QS +S + GT WMAPEV+ + DIWSLG
Sbjct: 153 DGSVKLTDFGFCAQITP-------EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 205
Query: 161 MVIEMATGRPPWGDKISNAAATLLKIACSNEKPHF--PTQFFKKVLDFLAKCLERKPEKR 218
M IEM G PP+ ++ N L IA +N P P + DFL +CLE EKR
Sbjct: 206 MAIEMIEGEPPYLNE--NPLRALYLIA-TNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR 262
Query: 219 WSAEELLNHTFI 230
SA+EL+ H F+
Sbjct: 263 GSAKELIQHQFL 274
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 112/228 (49%), Gaps = 27/228 (11%)
Query: 21 QALRNEAEIRQSLNSPNI-------GRNGEKTVNIFMEYMAGGSLLDVAEKFGGTL--DA 71
Q L E + + L NI NG + IFME + GGSL + G L +
Sbjct: 50 QPLHEEIALHKHLKHKNIVQYLGSFSENG--FIKIFMEQVPGGSLSALLRSKWGPLKDNE 107
Query: 72 GVIRLYTKEIL------HGNGILHCDLKCNNVLLGSH-GDVKLPDLGCARRVNDLKNNGN 124
I YTK+IL H N I+H D+K +NVL+ ++ G +K+ D G ++R+
Sbjct: 108 QTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL------AG 161
Query: 125 LKQSWQSIGGTQLWMAPEVLRN--EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAAT 182
+ ++ GT +MAPE++ G A DIWSLGC +IEMATG+PP+ + + A
Sbjct: 162 INPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE-LGEPQAA 220
Query: 183 LLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
+ K+ P P + F+ KC E P+KR A +LL F+
Sbjct: 221 MFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFL 268
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 125/261 (47%), Gaps = 31/261 (11%)
Query: 2 NKGTGALFVVKSAE--SEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMA 54
NK TGAL K E SE ++ E EI + + P I + + + I +E+
Sbjct: 32 NKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCP 91
Query: 55 GGSLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLP 108
GG++ + + L I++ +++L H I+H DLK NVL+ GD++L
Sbjct: 92 GGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLA 151
Query: 109 DLGCARRVNDLKNNGNLK--QSWQSIGGTQLWMAPEV-----LRNEGLDFATDIWSLGCM 161
D G + + NLK Q S GT WMAPEV +++ D+ DIWSLG
Sbjct: 152 DFGVSAK--------NLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGIT 203
Query: 162 VIEMATGRPPWGDKISNAAATLLKIACSNEKPHF-PTQFFKKVLDFLAKCLERKPEKRWS 220
+IEMA PP + N LLKIA S+ P+++ + DFL L++ PE R S
Sbjct: 204 LIEMAQIEPPHHE--LNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPS 261
Query: 221 AEELLNHTFISGNAKKNSTEE 241
A +LL H F+S + E
Sbjct: 262 AAQLLEHPFVSSITSNKALRE 282
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 123/252 (48%), Gaps = 31/252 (12%)
Query: 2 NKGTGALFVVKSAE--SEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMA 54
NK TGAL K E SE ++ E EI + + P I + + + I +E+
Sbjct: 40 NKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCP 99
Query: 55 GGSLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLP 108
GG++ + + L I++ +++L H I+H DLK NVL+ GD++L
Sbjct: 100 GGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLA 159
Query: 109 DLGCARRVNDLKNNGNLK--QSWQSIGGTQLWMAPEV-----LRNEGLDFATDIWSLGCM 161
D G + + NLK Q S GT WMAPEV +++ D+ DIWSLG
Sbjct: 160 DFGVSAK--------NLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGIT 211
Query: 162 VIEMATGRPPWGDKISNAAATLLKIACSNEKPHF-PTQFFKKVLDFLAKCLERKPEKRWS 220
+IEMA PP + N LLKIA S+ P+++ + DFL L++ PE R S
Sbjct: 212 LIEMAQIEPPHHE--LNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPS 269
Query: 221 AEELLNHTFISG 232
A +LL H F+S
Sbjct: 270 AAQLLEHPFVSS 281
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 104/219 (47%), Gaps = 31/219 (14%)
Query: 48 IFMEYMAGGSLLDV-------AEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKC 94
+ M+ ++GGS+LD+ E G LD I +E+L H NG +H D+K
Sbjct: 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKA 149
Query: 95 NNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQS--WQSIGGTQLWMAPEVLRN-EGLDF 151
N+LLG G V++ D G + L G++ ++ ++ GT WMAPEV+ G DF
Sbjct: 150 GNILLGEDGSVQIADFGVSAF---LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDF 206
Query: 152 ATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPT---------QFFKK 202
DIWS G IE+ATG P+ +L + N+ P T ++ K
Sbjct: 207 KADIWSFGITAIELATGAAPYH---KYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKS 263
Query: 203 VLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
++ CL++ PEKR +A ELL H F K +E
Sbjct: 264 FRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEFLQE 302
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 101/208 (48%), Gaps = 31/208 (14%)
Query: 48 IFMEYMAGGSLLDV-------AEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKC 94
+ M+ ++GGS+LD+ E G LD I +E+L H NG +H D+K
Sbjct: 85 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKA 144
Query: 95 NNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQS--WQSIGGTQLWMAPEVLRN-EGLDF 151
N+LLG G V++ D G + L G++ ++ ++ GT WMAPEV+ G DF
Sbjct: 145 GNILLGEDGSVQIADFGVSAF---LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDF 201
Query: 152 ATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPT---------QFFKK 202
DIWS G IE+ATG P+ +L + N+ P T ++ K
Sbjct: 202 KADIWSFGITAIELATGAAPYH---KYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKS 258
Query: 203 VLDFLAKCLERKPEKRWSAEELLNHTFI 230
++ CL++ PEKR +A ELL H F
Sbjct: 259 FRKMISLCLQKDPEKRPTAAELLRHKFF 286
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 98/192 (51%), Gaps = 21/192 (10%)
Query: 48 IFMEYMAGGSLLDVA------EKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGS 101
+ ME++ GG+L D+ E+ T+ V++ LH G++H D+K +++LL
Sbjct: 119 VLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALA--YLHAQGVIHRDIKSDSILLTL 176
Query: 102 HGDVKLPDLG-CARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGC 160
G VKL D G CA+ D+ L GT WMAPEV+ DIWSLG
Sbjct: 177 DGRVKLSDFGFCAQISKDVPKRKXLV-------GTPYWMAPEVISRSLYATEVDIWSLGI 229
Query: 161 MVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP-TQFFKKVL-DFLAKCLERKPEKR 218
MVIEM G PP+ S++ +K + P + VL DFL + L R P++R
Sbjct: 230 MVIEMVDGEPPY---FSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQER 286
Query: 219 WSAEELLNHTFI 230
+A+ELL+H F+
Sbjct: 287 ATAQELLDHPFL 298
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 121/240 (50%), Gaps = 35/240 (14%)
Query: 22 ALRN----EAEIRQSLNSPNI-GRNG----EKTVNIFMEYMAGGSLLDVAEKFG------ 66
A+RN E ++ NSP I G G + ++I ME+M GGSL V +K G
Sbjct: 65 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI 124
Query: 67 -GTLDAGVIR--LYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNG 123
G + VI+ Y +E + I+H D+K +N+L+ S G++KL D G + ++ D N
Sbjct: 125 LGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN- 180
Query: 124 NLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKI-SNAAAT 182
S GT+ +M+PE L+ +DIWS+G ++EMA GR P G S A
Sbjct: 181 -------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFE 233
Query: 183 LLKIACSNEKPHFPTQFFK-KVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
LL + P P+ F + DF+ KCL + P +R ++L+ H FI K++ EE
Sbjct: 234 LLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI----KRSDAEE 289
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 119/239 (49%), Gaps = 37/239 (15%)
Query: 22 ALRN----EAEIRQSLNSPNI-GRNG----EKTVNIFMEYMAGGSLLDVAEKFG------ 66
A+RN E ++ NSP I G G + ++I ME+M GGSL V +K G
Sbjct: 49 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI 108
Query: 67 -GTLDAGVIR--LYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNG 123
G + VI+ Y +E + I+H D+K +N+L+ S G++KL D G + ++ D N
Sbjct: 109 LGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMAN- 164
Query: 124 NLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATL 183
GT+ +M+PE L+ +DIWS+G ++EMA GR P + A L
Sbjct: 165 -------EFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP---RPPMAIFEL 214
Query: 184 LKIACSNEKPHFPTQFFK-KVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
L + P P+ F + DF+ KCL + P +R ++L+ H FI K++ EE
Sbjct: 215 LDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI----KRSDAEE 269
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 122/246 (49%), Gaps = 41/246 (16%)
Query: 22 ALRN----EAEIRQSLNSPNI-GRNG----EKTVNIFMEYMAGGSLLDVAEKFG------ 66
A+RN E ++ NSP I G G + ++I ME+M GGSL V +K G
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI 105
Query: 67 -GTLDAGVIR--LYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNG 123
G + VI+ Y +E + I+H D+K +N+L+ S G++KL D G + ++ D N
Sbjct: 106 LGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN- 161
Query: 124 NLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGR----PPWGDKISN- 178
S GT+ +M+PE L+ +DIWS+G ++EMA GR PP + S
Sbjct: 162 -------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRP 214
Query: 179 --AAATLLKIACSNEKPHFPTQFFK-KVLDFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
A LL + P P+ F + DF+ KCL + P +R ++L+ H FI K
Sbjct: 215 PMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI----K 270
Query: 236 KNSTEE 241
++ EE
Sbjct: 271 RSDAEE 276
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 98/192 (51%), Gaps = 21/192 (10%)
Query: 48 IFMEYMAGGSLLDVA------EKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGS 101
+ ME++ GG+L D+ E+ T+ V+R + LH G++H D+K +++LL S
Sbjct: 119 VVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALS--YLHNQGVIHRDIKSDSILLTS 176
Query: 102 HGDVKLPDLG-CARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGC 160
G +KL D G CA+ ++ L GT WMAPEV+ DIWSLG
Sbjct: 177 DGRIKLSDFGFCAQVSKEVPKRKXLV-------GTPYWMAPEVISRLPYGTEVDIWSLGI 229
Query: 161 MVIEMATGRPPWGDKISNAAATLLK--IACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
MVIEM G PP+ ++ A ++ + + H + + LD + L R+P +R
Sbjct: 230 MVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLM---LVREPSQR 286
Query: 219 WSAEELLNHTFI 230
+A+ELL H F+
Sbjct: 287 ATAQELLGHPFL 298
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 93/194 (47%), Gaps = 23/194 (11%)
Query: 48 IFMEYMAGGSLLDVA-------EKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLG 100
+ ME++ GG+L D+ E+ A L +LH G++H D+K +++LL
Sbjct: 225 VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAV---LQALSVLHAQGVIHRDIKSDSILLT 281
Query: 101 SHGDVKLPDLG-CARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLG 159
G VKL D G CA+ ++ L GT WMAPE++ DIWSLG
Sbjct: 282 HDGRVKLSDFGFCAQVSKEVPRRKXLV-------GTPYWMAPELISRLPYGPEVDIWSLG 334
Query: 160 CMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPT--QFFKKVLDFLAKCLERKPEK 217
MVIEM G PP+ ++ A +++ N P + + FL + L R P +
Sbjct: 335 IMVIEMVDGEPPYFNEPPLKAMKMIR---DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQ 391
Query: 218 RWSAEELLNHTFIS 231
R +A ELL H F++
Sbjct: 392 RATAAELLKHPFLA 405
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 93/194 (47%), Gaps = 23/194 (11%)
Query: 48 IFMEYMAGGSLLDVA-------EKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLG 100
+ ME++ GG+L D+ E+ A L +LH G++H D+K +++LL
Sbjct: 103 VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAV---LQALSVLHAQGVIHRDIKSDSILLT 159
Query: 101 SHGDVKLPDLG-CARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLG 159
G VKL D G CA+ ++ L GT WMAPE++ DIWSLG
Sbjct: 160 HDGRVKLSDFGFCAQVSKEVPRRKXLV-------GTPYWMAPELISRLPYGPEVDIWSLG 212
Query: 160 CMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPT--QFFKKVLDFLAKCLERKPEK 217
MVIEM G PP+ ++ A +++ N P + + FL + L R P +
Sbjct: 213 IMVIEMVDGEPPYFNEPPLKAMKMIR---DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQ 269
Query: 218 RWSAEELLNHTFIS 231
R +A ELL H F++
Sbjct: 270 RATAAELLKHPFLA 283
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 93/194 (47%), Gaps = 23/194 (11%)
Query: 48 IFMEYMAGGSLLDVA-------EKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLG 100
+ ME++ GG+L D+ E+ A L +LH G++H D+K +++LL
Sbjct: 105 VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAV---LQALSVLHAQGVIHRDIKSDSILLT 161
Query: 101 SHGDVKLPDLG-CARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLG 159
G VKL D G CA+ ++ L GT WMAPE++ DIWSLG
Sbjct: 162 HDGRVKLSDFGFCAQVSKEVPRRKXLV-------GTPYWMAPELISRLPYGPEVDIWSLG 214
Query: 160 CMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPT--QFFKKVLDFLAKCLERKPEK 217
MVIEM G PP+ ++ A +++ N P + + FL + L R P +
Sbjct: 215 IMVIEMVDGEPPYFNEPPLKAMKMIR---DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQ 271
Query: 218 RWSAEELLNHTFIS 231
R +A ELL H F++
Sbjct: 272 RATAAELLKHPFLA 285
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 93/194 (47%), Gaps = 23/194 (11%)
Query: 48 IFMEYMAGGSLLDVA-------EKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLG 100
+ ME++ GG+L D+ E+ A L +LH G++H D+K +++LL
Sbjct: 148 VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAV---LQALSVLHAQGVIHRDIKSDSILLT 204
Query: 101 SHGDVKLPDLG-CARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLG 159
G VKL D G CA+ ++ L GT WMAPE++ DIWSLG
Sbjct: 205 HDGRVKLSDFGFCAQVSKEVPRRKXLV-------GTPYWMAPELISRLPYGPEVDIWSLG 257
Query: 160 CMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPT--QFFKKVLDFLAKCLERKPEK 217
MVIEM G PP+ ++ A +++ N P + + FL + L R P +
Sbjct: 258 IMVIEMVDGEPPYFNEPPLKAMKMIR---DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQ 314
Query: 218 RWSAEELLNHTFIS 231
R +A ELL H F++
Sbjct: 315 RATAAELLKHPFLA 328
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 93/194 (47%), Gaps = 23/194 (11%)
Query: 48 IFMEYMAGGSLLDVA-------EKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLG 100
+ ME++ GG+L D+ E+ A L +LH G++H D+K +++LL
Sbjct: 94 VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAV---LQALSVLHAQGVIHRDIKSDSILLT 150
Query: 101 SHGDVKLPDLG-CARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLG 159
G VKL D G CA+ ++ L GT WMAPE++ DIWSLG
Sbjct: 151 HDGRVKLSDFGFCAQVSKEVPRRKXLV-------GTPYWMAPELISRLPYGPEVDIWSLG 203
Query: 160 CMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPT--QFFKKVLDFLAKCLERKPEK 217
MVIEM G PP+ ++ A +++ N P + + FL + L R P +
Sbjct: 204 IMVIEMVDGEPPYFNEPPLKAMKMIR---DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQ 260
Query: 218 RWSAEELLNHTFIS 231
R +A ELL H F++
Sbjct: 261 RATAAELLKHPFLA 274
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 93/194 (47%), Gaps = 23/194 (11%)
Query: 48 IFMEYMAGGSLLDVA-------EKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLG 100
+ ME++ GG+L D+ E+ A L +LH G++H D+K +++LL
Sbjct: 98 VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAV---LQALSVLHAQGVIHRDIKSDSILLT 154
Query: 101 SHGDVKLPDLG-CARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLG 159
G VKL D G CA+ ++ L GT WMAPE++ DIWSLG
Sbjct: 155 HDGRVKLSDFGFCAQVSKEVPRRKXLV-------GTPYWMAPELISRLPYGPEVDIWSLG 207
Query: 160 CMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPT--QFFKKVLDFLAKCLERKPEK 217
MVIEM G PP+ ++ A +++ N P + + FL + L R P +
Sbjct: 208 IMVIEMVDGEPPYFNEPPLKAMKMIR---DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQ 264
Query: 218 RWSAEELLNHTFIS 231
R +A ELL H F++
Sbjct: 265 RATAAELLKHPFLA 278
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 95/196 (48%), Gaps = 22/196 (11%)
Query: 48 IFMEYMAGGSLLDVAEKF-GGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLG 100
+ ME+ GS+ D+ + G TL I +EIL H + ++H D+K NVLL
Sbjct: 104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT 163
Query: 101 SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR-----NEGLDFATDI 155
+ +VKL D G + +++ N + GT WMAPEV+ + DF +D+
Sbjct: 164 ENAEVKLVDFGVSAQLDRTVGRRN------TFIGTPYWMAPEVIACDENPDATYDFKSDL 217
Query: 156 WSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPT-QFFKKVLDFLAKCLERK 214
WSLG IEMA G PP D A L+ N P + ++ KK F+ CL +
Sbjct: 218 WSLGITAIEMAEGAPPLCDMHPMRALFLIP---RNPAPRLKSKKWSKKFQSFIESCLVKN 274
Query: 215 PEKRWSAEELLNHTFI 230
+R + E+L+ H FI
Sbjct: 275 HSQRPATEQLMKHPFI 290
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 108/227 (47%), Gaps = 33/227 (14%)
Query: 21 QALRNEAEIRQSLNSPN-IGRNG----EKTVNIFMEYMAGGS--LLDVAEKFGGTLDAGV 73
Q + E Q L PN I G E T + MEY G + LL+V +K ++
Sbjct: 60 QDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA 119
Query: 74 IR---LYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQ 130
+ L LH + ++H D+K N+LL G VKL D G A ++
Sbjct: 120 VTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSA----------SIMAPAN 169
Query: 131 SIGGTQLWMAPEVL--RNEG-LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIA 187
GT WMAPEV+ +EG D D+WSLG IE+A +PP + NA + L IA
Sbjct: 170 XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN--MNAMSALYHIA 227
Query: 188 CSNEKPHFP----TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
NE P +++F+ +F+ CL++ P+ R ++E LL H F+
Sbjct: 228 -QNESPALQSGHWSEYFR---NFVDSCLQKIPQDRPTSEVLLKHRFV 270
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 20/219 (9%)
Query: 17 EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71
E V + E ++ L+ P + ++ + + Y G LL K G + D
Sbjct: 73 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIG-SFDE 131
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNL 125
R YT EI LHG GI+H DLK N+LL +++ D G A+ ++
Sbjct: 132 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 126 KQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLK 185
S GT +++PE+L + ++D+W+LGC++ ++ G PP+ + N K
Sbjct: 192 ----NSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQK 245
Query: 186 IACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
I + FP +FF K D + K L KR EE+
Sbjct: 246 II--KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEM 282
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 108/227 (47%), Gaps = 33/227 (14%)
Query: 21 QALRNEAEIRQSLNSPN-IGRNG----EKTVNIFMEYMAGGS--LLDVAEKFGGTLDAGV 73
Q + E Q L PN I G E T + MEY G + LL+V +K ++
Sbjct: 99 QDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA 158
Query: 74 IR---LYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQ 130
+ L LH + ++H D+K N+LL G VKL D G A ++
Sbjct: 159 VTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSA----------SIMAPAN 208
Query: 131 SIGGTQLWMAPEVL--RNEG-LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIA 187
GT WMAPEV+ +EG D D+WSLG IE+A +PP + NA + L IA
Sbjct: 209 XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN--MNAMSALYHIA 266
Query: 188 CSNEKPHFP----TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
NE P +++F+ +F+ CL++ P+ R ++E LL H F+
Sbjct: 267 -QNESPALQSGHWSEYFR---NFVDSCLQKIPQDRPTSEVLLKHRFV 309
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 111/243 (45%), Gaps = 24/243 (9%)
Query: 12 KSAESEAG-VQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF 65
K A +AG VQ ++NE +I L P+I V + +E G + +
Sbjct: 46 KKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNR 105
Query: 66 GGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDL 119
R + +I LH +GILH DL +N+LL + ++K+ D G A ++
Sbjct: 106 VKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLK-- 163
Query: 120 KNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWG-DKISN 178
+ ++ GT +++PE+ +D+WSLGCM + GRPP+ D + N
Sbjct: 164 ----MPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN 219
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNS 238
TL K+ ++ + P+ + D + + L R P R S +L+H F+S N+ S
Sbjct: 220 ---TLNKVVLADYE--MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSSTKS 274
Query: 239 TEE 241
+E
Sbjct: 275 KDE 277
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 20/219 (9%)
Query: 17 EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71
E V + E ++ L+ P + ++ + + Y G LL K G + D
Sbjct: 70 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDE 128
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNL 125
R YT EI LHG GI+H DLK N+LL +++ D G A+ ++
Sbjct: 129 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 188
Query: 126 KQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLK 185
S GT +++PE+L + ++D+W+LGC++ ++ G PP+ + N K
Sbjct: 189 ----NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQK 242
Query: 186 IACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
I + FP +FF K D + K L KR EE+
Sbjct: 243 II--KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEM 279
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 20/219 (9%)
Query: 17 EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71
E V + E ++ L+ P + ++ + + Y G LL K G + D
Sbjct: 74 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDE 132
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNL 125
R YT EI LHG GI+H DLK N+LL +++ D G A+ ++
Sbjct: 133 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 192
Query: 126 KQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLK 185
S GT +++PE+L + ++D+W+LGC++ ++ G PP+ + N K
Sbjct: 193 ----NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQK 246
Query: 186 IACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
I + FP +FF K D + K L KR EE+
Sbjct: 247 II--KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEM 283
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 125/278 (44%), Gaps = 73/278 (26%)
Query: 22 ALRN----EAEIRQSLNSPNI-GRNG----EKTVNIFMEYMAGGSLLDVAEKFG------ 66
A+RN E ++ NSP I G G + ++I ME+M GGSL V +K G
Sbjct: 108 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI 167
Query: 67 -GTLDAGVIR--LYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNG 123
G + VI+ Y +E + I+H D+K +N+L+ S G++KL D G + ++ D N
Sbjct: 168 LGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN- 223
Query: 124 NLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGR---PP--------- 171
S GT+ +M+PE L+ +DIWS+G ++EMA GR PP
Sbjct: 224 -------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 276
Query: 172 WGDKISNAAA---------------------------TLLKIACSNEKPHFPTQFFK-KV 203
+G ++ AA LL + P P+ F +
Sbjct: 277 FGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSAVFSLEF 336
Query: 204 LDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
DF+ KCL + P +R ++L+ H FI K++ EE
Sbjct: 337 QDFVNKCLIKNPAERADLKQLMVHAFI----KRSDAEE 370
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 124/278 (44%), Gaps = 73/278 (26%)
Query: 22 ALRN----EAEIRQSLNSPNI-GRNG----EKTVNIFMEYMAGGSLLDVAEKFG------ 66
A+RN E ++ NSP I G G + ++I ME+M GGSL V +K G
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI 105
Query: 67 -GTLDAGVIR--LYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNG 123
G + VI+ Y +E + I+H D+K +N+L+ S G++KL D G + ++ D N
Sbjct: 106 LGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN- 161
Query: 124 NLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPP------------ 171
S GT+ +M+PE L+ +DIWS+G ++EMA GR P
Sbjct: 162 -------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 214
Query: 172 WGDKISNAAA---------------------------TLLKIACSNEKPHFPTQFFK-KV 203
+G ++ AA LL + P P+ F +
Sbjct: 215 FGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEF 274
Query: 204 LDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
DF+ KCL + P +R ++L+ H FI K++ EE
Sbjct: 275 QDFVNKCLIKNPAERADLKQLMVHAFI----KRSDAEE 308
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 15/181 (8%)
Query: 50 MEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHG 103
+ Y G LL K G + D R YT EI LHG GI+H DLK N+LL
Sbjct: 111 LSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM 169
Query: 104 DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVI 163
+++ D G A+ ++ GT +++PE+L + ++D+W+LGC++
Sbjct: 170 HIQITDFGTAKVLSPESKQARA----NXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIY 225
Query: 164 EMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEE 223
++ G PP+ + N KI + FP +FF K D + K L KR EE
Sbjct: 226 QLVAGLPPF--RAGNEGLIFAKII--KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEE 281
Query: 224 L 224
+
Sbjct: 282 M 282
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 124/278 (44%), Gaps = 73/278 (26%)
Query: 22 ALRN----EAEIRQSLNSPNI-GRNG----EKTVNIFMEYMAGGSLLDVAEKFG------ 66
A+RN E ++ NSP I G G + ++I ME+M GGSL V +K G
Sbjct: 73 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI 132
Query: 67 -GTLDAGVIR--LYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNG 123
G + VI+ Y +E + I+H D+K +N+L+ S G++KL D G + ++ D N
Sbjct: 133 LGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN- 188
Query: 124 NLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPP------------ 171
S GT+ +M+PE L+ +DIWS+G ++EMA GR P
Sbjct: 189 -------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 241
Query: 172 WGDKISNAAA---------------------------TLLKIACSNEKPHFPTQFFK-KV 203
+G ++ AA LL + P P+ F +
Sbjct: 242 FGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEF 301
Query: 204 LDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
DF+ KCL + P +R ++L+ H FI K++ EE
Sbjct: 302 QDFVNKCLIKNPAERADLKQLMVHAFI----KRSDAEE 335
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 124/278 (44%), Gaps = 73/278 (26%)
Query: 22 ALRN----EAEIRQSLNSPNI-GRNG----EKTVNIFMEYMAGGSLLDVAEKFG------ 66
A+RN E ++ NSP I G G + ++I ME+M GGSL V +K G
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI 105
Query: 67 -GTLDAGVIR--LYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNG 123
G + VI+ Y +E + I+H D+K +N+L+ S G++KL D G + ++ D N
Sbjct: 106 LGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN- 161
Query: 124 NLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPP------------ 171
S GT+ +M+PE L+ +DIWS+G ++EMA GR P
Sbjct: 162 -------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 214
Query: 172 WGDKISNAAA---------------------------TLLKIACSNEKPHFPTQFFK-KV 203
+G ++ AA LL + P P+ F +
Sbjct: 215 FGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEF 274
Query: 204 LDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
DF+ KCL + P +R ++L+ H FI K++ EE
Sbjct: 275 QDFVNKCLIKNPAERADLKQLMVHAFI----KRSDAEE 308
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 114/248 (45%), Gaps = 26/248 (10%)
Query: 7 ALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY G++
Sbjct: 38 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 97
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+K D Y E+ H ++H D+K N+LLGS G++K+ D G +
Sbjct: 98 RELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 156
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWG 173
+ ++ GT ++ PE++ D D+WSLG + E G+PP+
Sbjct: 157 CHAPSSRRT--------TLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF- 207
Query: 174 DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
+ + T +I S + FP + D +++ L+ P +R E+L H +I+ N
Sbjct: 208 -EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 264
Query: 234 AKKNSTEE 241
+ K S +
Sbjct: 265 SSKPSNSQ 272
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 124/278 (44%), Gaps = 73/278 (26%)
Query: 22 ALRN----EAEIRQSLNSPNI-GRNG----EKTVNIFMEYMAGGSLLDVAEKFG------ 66
A+RN E ++ NSP I G G + ++I ME+M GGSL V +K G
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI 105
Query: 67 -GTLDAGVIR--LYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNG 123
G + VI+ Y +E + I+H D+K +N+L+ S G++KL D G + ++ D N
Sbjct: 106 LGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN- 161
Query: 124 NLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPP------------ 171
S GT+ +M+PE L+ +DIWS+G ++EMA GR P
Sbjct: 162 -------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 214
Query: 172 WGDKISNAAA---------------------------TLLKIACSNEKPHFPTQFFK-KV 203
+G ++ AA LL + P P+ F +
Sbjct: 215 FGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEF 274
Query: 204 LDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
DF+ KCL + P +R ++L+ H FI K++ EE
Sbjct: 275 QDFVNKCLIKNPAERADLKQLMVHAFI----KRSDAEE 308
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 124/278 (44%), Gaps = 73/278 (26%)
Query: 22 ALRN----EAEIRQSLNSPNI-GRNG----EKTVNIFMEYMAGGSLLDVAEKFG------ 66
A+RN E ++ NSP I G G + ++I ME+M GGSL V +K G
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI 105
Query: 67 -GTLDAGVIR--LYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNG 123
G + VI+ Y +E + I+H D+K +N+L+ S G++KL D G + ++ D N
Sbjct: 106 LGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN- 161
Query: 124 NLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPP------------ 171
S GT+ +M+PE L+ +DIWS+G ++EMA GR P
Sbjct: 162 -------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 214
Query: 172 WGDKISNAAA---------------------------TLLKIACSNEKPHFPTQFFK-KV 203
+G ++ AA LL + P P+ F +
Sbjct: 215 FGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEF 274
Query: 204 LDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
DF+ KCL + P +R ++L+ H FI K++ EE
Sbjct: 275 QDFVNKCLIKNPAERADLKQLMVHAFI----KRSDAEE 308
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 102/216 (47%), Gaps = 27/216 (12%)
Query: 23 LRNEAEIRQSLNSPNI---GRNGEKTVN------IFMEYMAGGSLLDVAEKFGGTLDAGV 73
R EA+ +LN P I GE I MEY+ G +L D+ G
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 74 IRLYTKE-----ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQS 128
I + H NGI+H D+K N+L+ + VK+ D G AR + D +GN
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIAD---SGNSVXQ 175
Query: 129 WQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIA 187
++ GT +++PE R + +D +D++SLGC++ E+ TG PP+ GD + A ++
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR-- 233
Query: 188 CSNEKPHFPTQFFKKV---LDFLA-KCLERKPEKRW 219
E P P+ + + LD + K L + PE R+
Sbjct: 234 ---EDPIPPSARHEGLSADLDAVVLKALAKNPENRY 266
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 26/245 (10%)
Query: 7 ALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY G++
Sbjct: 38 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 97
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+K D Y E+ H ++H D+K N+LLGS G++K+ D G +
Sbjct: 98 RELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 156
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWG 173
+ + ++ GT ++ PE++ D D+WSLG + E G+PP+
Sbjct: 157 VHAPSSRRD--------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF- 207
Query: 174 DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
+ + T +I S + FP + D +++ L+ P +R E+L H +I+ N
Sbjct: 208 -EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 264
Query: 234 AKKNS 238
+ K S
Sbjct: 265 SSKPS 269
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 26/245 (10%)
Query: 7 ALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY G +
Sbjct: 42 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVY 101
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+K D Y E+ H ++H D+K N+LLGS G++K+ D G +
Sbjct: 102 KELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWG 173
+ ++ GT ++ PE++ D D+WSLG + E G+PP+
Sbjct: 161 VHAPSSRRT--------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF- 211
Query: 174 DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
+ + T +I S + FP + D +++ L+ P +R E+L H +I+ N
Sbjct: 212 -EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 268
Query: 234 AKKNS 238
+ K S
Sbjct: 269 SSKPS 273
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 26/245 (10%)
Query: 7 ALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY G++
Sbjct: 42 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 101
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+K D Y E+ H ++H D+K N+LLGS G++K+ D G +
Sbjct: 102 RELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWG 173
+ ++ GT ++ PE++ D D+WSLG + E G+PP+
Sbjct: 161 VHAPSSRRT--------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF- 211
Query: 174 DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
+ + T +I S + FP + D +++ L+ P +R E+L H +I+ N
Sbjct: 212 -EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 268
Query: 234 AKKNS 238
+ K S
Sbjct: 269 SSKPS 273
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 86.7 bits (213), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 26/245 (10%)
Query: 7 ALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY G++
Sbjct: 40 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 99
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+K D Y E+ H ++H D+K N+LLGS G++K+ D G +
Sbjct: 100 RELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWG 173
+ ++ GT ++ PE++ D D+WSLG + E G+PP+
Sbjct: 159 VHAPSSRRT--------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF- 209
Query: 174 DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
+ + T +I S + FP + D +++ L+ P +R E+L H +I+ N
Sbjct: 210 -EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 266
Query: 234 AKKNS 238
+ K S
Sbjct: 267 SSKPS 271
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 86.7 bits (213), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 27/216 (12%)
Query: 23 LRNEAEIRQSLNSPNI---GRNGEKTVN------IFMEYMAGGSLLDVAEKFGGTLDAGV 73
R EA+ +LN P I GE I MEY+ G +L D+ G
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 74 IRLYTKE-----ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQS 128
I + H NGI+H D+K N+++ + VK+ D G AR + D +GN
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD---SGNSVTQ 175
Query: 129 WQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIA 187
++ GT +++PE R + +D +D++SLGC++ E+ TG PP+ GD + A ++
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVR-- 233
Query: 188 CSNEKPHFPTQFFKKV---LDFLA-KCLERKPEKRW 219
E P P+ + + LD + K L + PE R+
Sbjct: 234 ---EDPIPPSARHEGLSADLDAVVLKALAKNPENRY 266
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 26/245 (10%)
Query: 7 ALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY G++
Sbjct: 42 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 101
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+K D Y E+ H ++H D+K N+LLGS G++K+ D G +
Sbjct: 102 RELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWG 173
+ ++ GT ++ PE + D D+WSLG + E G+PP+
Sbjct: 161 VHAPSSRRT--------TLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPF- 211
Query: 174 DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
+ + T +I S + FP + D +++ L+ P +R E+L H +I+ N
Sbjct: 212 -EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPXLREVLEHPWITAN 268
Query: 234 AKKNS 238
+ K S
Sbjct: 269 SSKPS 273
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 26/245 (10%)
Query: 7 ALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY G++
Sbjct: 63 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 122
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+K D Y E+ H ++H D+K N+LLGS G++K+ D G +
Sbjct: 123 RELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 181
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWG 173
+ ++ GT ++ PE++ D D+WSLG + E G+PP+
Sbjct: 182 VHAPSSRRT--------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF- 232
Query: 174 DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
+ + T +I S + FP + D +++ L+ P +R E+L H +I+ N
Sbjct: 233 -EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 289
Query: 234 AKKNS 238
+ K S
Sbjct: 290 SSKPS 294
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 20/219 (9%)
Query: 17 EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71
E V + E ++ L+ P + ++ + + Y G LL K G + D
Sbjct: 71 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDE 129
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNL 125
R YT EI LHG GI+H DLK N+LL +++ D G A+ ++
Sbjct: 130 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 189
Query: 126 KQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLK 185
+ GT +++PE+L + ++D+W+LGC++ ++ G PP+ + N K
Sbjct: 190 ----NAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQK 243
Query: 186 IACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
I + FP +FF K D + K L KR EE+
Sbjct: 244 II--KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEM 280
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 26/245 (10%)
Query: 7 ALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY G++
Sbjct: 54 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 113
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+K D Y E+ H ++H D+K N+LLGS G++K+ D G +
Sbjct: 114 RELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 172
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWG 173
+ ++ GT ++ PE++ D D+WSLG + E G+PP+
Sbjct: 173 VHAPSSRRT--------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF- 223
Query: 174 DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
+ + T +I S + FP + D +++ L+ P +R E+L H +I+ N
Sbjct: 224 -EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 280
Query: 234 AKKNS 238
+ K S
Sbjct: 281 SSKPS 285
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 26/245 (10%)
Query: 7 ALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY G++
Sbjct: 37 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 96
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+K D Y E+ H ++H D+K N+LLGS G++K+ D G +
Sbjct: 97 RELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWG 173
+ ++ GT ++ PE++ D D+WSLG + E G+PP+
Sbjct: 156 VHAPSSRRT--------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF- 206
Query: 174 DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
+ + T +I S + FP + D +++ L+ P +R E+L H +I+ N
Sbjct: 207 -EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 263
Query: 234 AKKNS 238
+ K S
Sbjct: 264 SSKPS 268
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 26/245 (10%)
Query: 7 ALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY G++
Sbjct: 41 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 100
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+K D Y E+ H ++H D+K N+LLGS G++K+ D G +
Sbjct: 101 RELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 159
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWG 173
+ ++ GT ++ PE++ D D+WSLG + E G+PP+
Sbjct: 160 VHAPSSRRT--------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF- 210
Query: 174 DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
+ + T +I S + FP + D +++ L+ P +R E+L H +I+ N
Sbjct: 211 -EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 267
Query: 234 AKKNS 238
+ K S
Sbjct: 268 SSKPS 272
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 26/245 (10%)
Query: 7 ALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY G++
Sbjct: 36 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 95
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+K D Y E+ H ++H D+K N+LLGS G++K+ D G +
Sbjct: 96 RELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 154
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWG 173
+ ++ GT ++ PE++ D D+WSLG + E G+PP+
Sbjct: 155 VHAPSSRRT--------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF- 205
Query: 174 DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
+ + T +I S + FP + D +++ L+ P +R E+L H +I+ N
Sbjct: 206 -EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 262
Query: 234 AKKNS 238
+ K S
Sbjct: 263 SSKPS 267
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+AGG + + G + R Y
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV ++W +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTW-XLA 199
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 255
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 256 RFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 27/216 (12%)
Query: 23 LRNEAEIRQSLNSPNI---GRNGEKTVN------IFMEYMAGGSLLDVAEKFGGTLDAGV 73
R EA+ +LN P I GE I MEY+ G +L D+ G
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 74 IRLYTKE-----ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQS 128
I + H NGI+H D+K N+++ + VK+ D G AR + D +GN
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD---SGNSVTQ 175
Query: 129 WQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIA 187
++ GT +++PE R + +D +D++SLGC++ E+ TG PP+ GD + A ++
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR-- 233
Query: 188 CSNEKPHFPTQFFKKV---LDFLA-KCLERKPEKRW 219
E P P+ + + LD + K L + PE R+
Sbjct: 234 ---EDPIPPSARHEGLSADLDAVVLKALAKNPENRY 266
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 20/219 (9%)
Query: 17 EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71
E V + E ++ L+ P + ++ + + Y G LL K G + D
Sbjct: 73 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDE 131
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNL 125
R YT EI LHG GI+H DLK N+LL +++ D G A+ ++
Sbjct: 132 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 126 KQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLK 185
GT +++PE+L + ++D+W+LGC++ ++ G PP+ + N K
Sbjct: 192 ----NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEGLIFAK 245
Query: 186 IACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
I + FP +FF K D + K L KR EE+
Sbjct: 246 II--KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEM 282
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 111/245 (45%), Gaps = 26/245 (10%)
Query: 7 ALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY G +
Sbjct: 42 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVY 101
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+K D Y E+ H ++H D+K N+LLGS G++K+ D G +
Sbjct: 102 KELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWG 173
+ + GT ++ PE++ D D+WSLG + E G+PP+
Sbjct: 161 VHAPSSRRX--------XLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF- 211
Query: 174 DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
+ + T +I S + FP + D +++ L+ P +R E+L H +I+ N
Sbjct: 212 -EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 268
Query: 234 AKKNS 238
+ K S
Sbjct: 269 SSKPS 273
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 26/245 (10%)
Query: 7 ALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY G++
Sbjct: 40 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 99
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+K D Y E+ H ++H D+K N+LLGS G++K+ D G +
Sbjct: 100 RELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWG 173
+ + + GT ++ PE++ D D+WSLG + E G+PP+
Sbjct: 159 VHAPSSRRD--------DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF- 209
Query: 174 DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
+ + T +I S + FP + D +++ L+ P +R E+L H +I+ N
Sbjct: 210 -EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 266
Query: 234 AKKNS 238
+ K S
Sbjct: 267 SSKPS 271
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 112/246 (45%), Gaps = 28/246 (11%)
Query: 7 ALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY G++
Sbjct: 37 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVY 96
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+K D Y E+ H ++H D+K N+LLGS G++K+ D G +
Sbjct: 97 RELQKLS-KFDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWS 155
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPW- 172
+ ++ GT ++ PE++ D D+WSLG + E G+PP+
Sbjct: 156 VHAPSSRR--------AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
Query: 173 GDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISG 232
+ + + ++ + FP + D +++ L+ P +R E+L H +I+
Sbjct: 208 ANTYQDTYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
Query: 233 NAKKNS 238
N+ K S
Sbjct: 263 NSSKPS 268
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEYM GG + + G + R Y
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHA-RFYAA 148
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +K+ D G A+RV ++W +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG--------RTW-XLC 199
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 255
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 256 RFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 26/245 (10%)
Query: 7 ALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY G++
Sbjct: 63 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 122
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+K D Y E+ H ++H D+K N+LLGS G++K+ D G +
Sbjct: 123 RELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 181
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWG 173
+ + + GT ++ PE++ D D+WSLG + E G+PP+
Sbjct: 182 VHAPSSRRD--------DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF- 232
Query: 174 DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
+ + T +I S + FP + D +++ L+ P +R E+L H +I+ N
Sbjct: 233 -EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 289
Query: 234 AKKNS 238
+ K S
Sbjct: 290 SSKPS 294
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 27/216 (12%)
Query: 23 LRNEAEIRQSLNSPNI---GRNGEKTVN------IFMEYMAGGSLLDVAEKFGGTLDAGV 73
R EA+ +LN P I GE I MEY+ G +L D+ G
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 74 IRLYTKE-----ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQS 128
I + H NGI+H D+K N+++ + VK+ D G AR + D +GN
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD---SGNSVTQ 175
Query: 129 WQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIA 187
++ GT +++PE R + +D +D++SLGC++ E+ TG PP+ GD + A ++
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR-- 233
Query: 188 CSNEKPHFPTQFFKKV---LDFLA-KCLERKPEKRW 219
E P P+ + + LD + K L + PE R+
Sbjct: 234 ---EDPIPPSARHEGLSADLDAVVLKALAKNPENRY 266
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 26/245 (10%)
Query: 7 ALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY G++
Sbjct: 37 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 96
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+K D Y E+ H ++H D+K N+LLGS G++K+ D G +
Sbjct: 97 RELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWG 173
+ + GT ++ PE++ D D+WSLG + E G+PP+
Sbjct: 156 VHAPSSRRT--------DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF- 206
Query: 174 DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
+ + T +I S + FP + D +++ L+ P +R E+L H +I+ N
Sbjct: 207 -EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 263
Query: 234 AKKNS 238
+ K S
Sbjct: 264 SSKPS 268
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 26/245 (10%)
Query: 7 ALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY G++
Sbjct: 42 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 101
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+K D Y E+ H ++H D+K N+LLGS G++K+ D G +
Sbjct: 102 RELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWG 173
+ + GT ++ PE++ D D+WSLG + E G+PP+
Sbjct: 161 VHAPSSRRT--------DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF- 211
Query: 174 DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
+ + T +I S + FP + D +++ L+ P +R E+L H +I+ N
Sbjct: 212 -EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 268
Query: 234 AKKNS 238
+ K S
Sbjct: 269 SSKPS 273
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 20/219 (9%)
Query: 17 EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71
E V + E ++ L+ P + ++ + + Y G LL K G + D
Sbjct: 70 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDE 128
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNL 125
R YT EI LHG GI+H DLK N+LL +++ D G A+ ++
Sbjct: 129 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 188
Query: 126 KQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLK 185
GT +++PE+L + ++D+W+LGC++ ++ G PP+ + N K
Sbjct: 189 ----NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQK 242
Query: 186 IACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
I + FP +FF K D + K L KR EE+
Sbjct: 243 II--KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEM 279
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 20/219 (9%)
Query: 17 EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71
E V + E ++ L+ P + ++ + + Y G LL K G + D
Sbjct: 74 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDE 132
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNL 125
R YT EI LHG GI+H DLK N+LL +++ D G A+ ++
Sbjct: 133 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 192
Query: 126 KQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLK 185
GT +++PE+L + ++D+W+LGC++ ++ G PP+ + N K
Sbjct: 193 ----NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQK 246
Query: 186 IACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
I + FP +FF K D + K L KR EE+
Sbjct: 247 II--KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEM 283
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEYM GG + + G + R Y
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHA-RFYAA 148
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +K+ D G A+RV ++W +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG--------RTW-XLC 199
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 255
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 256 RFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 20/219 (9%)
Query: 17 EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71
E V + E ++ L+ P + ++ + + Y G LL K G + D
Sbjct: 71 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDE 129
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNL 125
R YT EI LHG GI+H DLK N+LL +++ D G A+ ++
Sbjct: 130 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 189
Query: 126 KQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLK 185
GT +++PE+L + ++D+W+LGC++ ++ G PP+ + N K
Sbjct: 190 ----NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQK 243
Query: 186 IACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
I + FP +FF K D + K L KR EE+
Sbjct: 244 II--KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEM 280
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 27/216 (12%)
Query: 23 LRNEAEIRQSLNSPNI---GRNGEKTVN------IFMEYMAGGSLLDVAEKFGGTLDAGV 73
R EA+ +LN P I GE I MEY+ G +L D+ G
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 74 IRLYTKE-----ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQS 128
I + H NGI+H D+K N+++ + VK+ D G AR + D +GN
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD---SGNSVTQ 175
Query: 129 WQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIA 187
++ GT +++PE R + +D +D++SLGC++ E+ TG PP+ GD + A ++
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR-- 233
Query: 188 CSNEKPHFPTQFFKKV---LDFLA-KCLERKPEKRW 219
E P P+ + + LD + K L + PE R+
Sbjct: 234 ---EDPIPPSARHEGLSADLDAVVLKALAKNPENRY 266
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 20/219 (9%)
Query: 17 EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71
E V + E ++ L+ P + ++ + + Y G LL K G + D
Sbjct: 71 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDE 129
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNL 125
R YT EI LHG GI+H DLK N+LL +++ D G A+ ++
Sbjct: 130 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 189
Query: 126 KQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLK 185
GT +++PE+L + ++D+W+LGC++ ++ G PP+ + N K
Sbjct: 190 ----NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQK 243
Query: 186 IACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
I + FP +FF K D + K L KR EE+
Sbjct: 244 II--KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEM 280
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 20/219 (9%)
Query: 17 EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71
E V + E ++ L+ P + ++ + + Y G LL K G + D
Sbjct: 71 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDE 129
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNL 125
R YT EI LHG GI+H DLK N+LL +++ D G A+ ++
Sbjct: 130 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 189
Query: 126 KQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLK 185
GT +++PE+L + ++D+W+LGC++ ++ G PP+ + N K
Sbjct: 190 ----NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQK 243
Query: 186 IACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
I + FP +FF K D + K L KR EE+
Sbjct: 244 II--KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEM 280
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 20/219 (9%)
Query: 17 EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71
E V + E ++ L+ P + ++ + + Y G LL K G + D
Sbjct: 55 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDE 113
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNL 125
R YT EI LHG GI+H DLK N+LL +++ D G A+ ++
Sbjct: 114 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 173
Query: 126 KQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLK 185
GT +++PE+L + ++D+W+LGC++ ++ G PP+ + N K
Sbjct: 174 ----NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQK 227
Query: 186 IACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
I + FP +FF K D + K L KR EE+
Sbjct: 228 II--KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEM 264
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 26/245 (10%)
Query: 7 ALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY G++
Sbjct: 37 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 96
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+K D Y E+ H ++H D+K N+LLGS G++K+ D G +
Sbjct: 97 RELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWG 173
+ + GT ++ PE++ D D+WSLG + E G+PP+
Sbjct: 156 VHAPSSRRT--------ELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF- 206
Query: 174 DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
+ + T +I S + FP + D +++ L+ P +R E+L H +I+ N
Sbjct: 207 -EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 263
Query: 234 AKKNS 238
+ K S
Sbjct: 264 SSKPS 268
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 20/219 (9%)
Query: 17 EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71
E V + E ++ L+ P + ++ + + Y G LL K G + D
Sbjct: 73 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDE 131
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNL 125
R YT EI LHG GI+H DLK N+LL +++ D G A+ ++
Sbjct: 132 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 126 KQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLK 185
GT +++PE+L + ++D+W+LGC++ ++ G PP+ + N K
Sbjct: 192 ----NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQK 245
Query: 186 IACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
I + FP +FF K D + K L KR EE+
Sbjct: 246 II--KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEM 282
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 20/219 (9%)
Query: 17 EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71
E V + E ++ L+ P + ++ + + Y G LL K G + D
Sbjct: 73 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDE 131
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNL 125
R YT EI LHG GI+H DLK N+LL +++ D G A+ ++
Sbjct: 132 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 126 KQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLK 185
GT +++PE+L + ++D+W+LGC++ ++ G PP+ + N K
Sbjct: 192 ----NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQK 245
Query: 186 IACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
I + FP +FF K D + K L KR EE+
Sbjct: 246 II--KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEM 282
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 20/219 (9%)
Query: 17 EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71
E V + E ++ L+ P + ++ + + Y G LL K G + D
Sbjct: 48 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDE 106
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNL 125
R YT EI LHG GI+H DLK N+LL +++ D G A+ ++
Sbjct: 107 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 166
Query: 126 KQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLK 185
GT +++PE+L + ++D+W+LGC++ ++ G PP+ + N K
Sbjct: 167 ----NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQK 220
Query: 186 IACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
I + FP +FF K D + K L KR EE+
Sbjct: 221 II--KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEM 257
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 20/219 (9%)
Query: 17 EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71
E V + E ++ L+ P + ++ + + Y G LL K G + D
Sbjct: 78 ENKVPYVTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDE 136
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNL 125
R YT EI LHG GI+H DLK N+LL +++ D G A+ ++
Sbjct: 137 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 196
Query: 126 KQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLK 185
GT +++PE+L + ++D+W+LGC++ ++ G PP+ + N K
Sbjct: 197 ----NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQK 250
Query: 186 IACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
I + FP +FF K D + K L KR EE+
Sbjct: 251 II--KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEM 287
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 20/219 (9%)
Query: 17 EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71
E V + E ++ L+ P + ++ + + Y G LL K G + D
Sbjct: 49 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDE 107
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNL 125
R YT EI LHG GI+H DLK N+LL +++ D G A+ ++
Sbjct: 108 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 167
Query: 126 KQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLK 185
GT +++PE+L + ++D+W+LGC++ ++ G PP+ + N K
Sbjct: 168 ----NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQK 221
Query: 186 IACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
I + FP +FF K D + K L KR EE+
Sbjct: 222 II--KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEM 258
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 20/219 (9%)
Query: 17 EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71
E V + E ++ L+ P + ++ + + Y G LL K G + D
Sbjct: 73 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDE 131
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNL 125
R YT EI LHG GI+H DLK N+LL +++ D G A+ ++
Sbjct: 132 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 126 KQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLK 185
GT +++PE+L + ++D+W+LGC++ ++ G PP+ + N K
Sbjct: 192 ----NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQK 245
Query: 186 IACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
I + FP +FF K D + K L KR EE+
Sbjct: 246 II--KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEM 282
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 26/245 (10%)
Query: 7 ALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY G++
Sbjct: 40 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 99
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+K D Y E+ H ++H D+K N+LLGS G++K+ D G +
Sbjct: 100 RELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWG 173
+ ++ GT ++ PE++ D D+WSLG + E G+PP+
Sbjct: 159 VHAPSSRR--------AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF- 209
Query: 174 DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
+ + T +I S + FP + D +++ L+ P +R E+L H +I+ N
Sbjct: 210 -EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 266
Query: 234 AKKNS 238
+ K S
Sbjct: 267 SSKPS 271
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 26/245 (10%)
Query: 7 ALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY G++
Sbjct: 37 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 96
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+K D Y E+ H ++H D+K N+LLGS G++K+ D G +
Sbjct: 97 RELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWG 173
+ + GT ++ PE++ D D+WSLG + E G+PP+
Sbjct: 156 VHAPSSRRT--------DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF- 206
Query: 174 DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
+ + T +I S + FP + D +++ L+ P +R E+L H +I+ N
Sbjct: 207 -EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 263
Query: 234 AKKNS 238
+ K S
Sbjct: 264 SSKPS 268
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 20/219 (9%)
Query: 17 EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71
E V + E ++ L+ P + ++ + + Y G LL K G + D
Sbjct: 50 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDE 108
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNL 125
R YT EI LHG GI+H DLK N+LL +++ D G A+ ++
Sbjct: 109 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 168
Query: 126 KQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLK 185
GT +++PE+L + ++D+W+LGC++ ++ G PP+ + N K
Sbjct: 169 ----NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQK 222
Query: 186 IACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
I + FP +FF K D + K L KR EE+
Sbjct: 223 II--KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEM 259
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 20/219 (9%)
Query: 17 EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71
E V + E ++ L+ P + ++ + + Y G LL K G + D
Sbjct: 51 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDE 109
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNL 125
R YT EI LHG GI+H DLK N+LL +++ D G A+ ++
Sbjct: 110 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 169
Query: 126 KQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLK 185
GT +++PE+L + ++D+W+LGC++ ++ G PP+ + N K
Sbjct: 170 ----NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQK 223
Query: 186 IACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
I + FP +FF K D + K L KR EE+
Sbjct: 224 II--KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEM 260
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 26/245 (10%)
Query: 7 ALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY G++
Sbjct: 38 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 97
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+K D Y E+ H ++H D+K N+LLGS G++K+ D G +
Sbjct: 98 RELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 156
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWG 173
+ + GT ++ PE++ D D+WSLG + E G+PP+
Sbjct: 157 VHAPSSRRT--------DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF- 207
Query: 174 DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
+ + T +I S + FP + D +++ L+ P +R E+L H +I+ N
Sbjct: 208 -EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 264
Query: 234 AKKNS 238
+ K S
Sbjct: 265 SSKPS 269
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+AGG + + G + R Y
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV ++W +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTW-XLX 199
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 255
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 256 RFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 112/243 (46%), Gaps = 26/243 (10%)
Query: 7 ALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY G++
Sbjct: 40 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 99
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+K D Y E+ H ++H D+K N+LLGS G++K+ D G +
Sbjct: 100 RELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWG 173
+ ++ GT ++ PE++ D D+WSLG + E G+PP+
Sbjct: 159 VHAPSSRRT--------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF- 209
Query: 174 DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
+ + T +I S + FP + D +++ L+ P +R E+L H +I+ N
Sbjct: 210 -EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 266
Query: 234 AKK 236
+ K
Sbjct: 267 SSK 269
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 26/245 (10%)
Query: 7 ALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY G++
Sbjct: 37 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 96
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+K D Y E+ H ++H D+K N+LLGS G++K+ D G +
Sbjct: 97 RELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWG 173
+ + GT ++ PE++ D D+WSLG + E G+PP+
Sbjct: 156 VHAPSSRRT--------XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF- 206
Query: 174 DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
+ + T +I S + FP + D +++ L+ P +R E+L H +I+ N
Sbjct: 207 -EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 263
Query: 234 AKKNS 238
+ K S
Sbjct: 264 SSKPS 268
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 115/250 (46%), Gaps = 26/250 (10%)
Query: 2 NKGTGALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMA 54
+K AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY
Sbjct: 32 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 91
Query: 55 GGSLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLP 108
G++ +K D Y E+ H ++H D+K N+LLGS G++K+
Sbjct: 92 LGTVYRELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 150
Query: 109 DLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATG 168
D G + + ++ GT ++ PE++ D D+WSLG + E G
Sbjct: 151 DFGWSVHAPSSRR--------AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
Query: 169 RPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHT 228
+PP+ + + T +I S + FP + D +++ L+ P +R E+L H
Sbjct: 203 KPPF--EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 258
Query: 229 FISGNAKKNS 238
+I+ N+ K S
Sbjct: 259 WITANSSKPS 268
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 27/216 (12%)
Query: 23 LRNEAEIRQSLNSPNI---GRNGEKTVN------IFMEYMAGGSLLDVAEKFGGTLDAGV 73
R EA+ +LN P I GE I MEY+ G +L D+ G
Sbjct: 76 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 135
Query: 74 IRLYTKE-----ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQS 128
I + H NGI+H D+K N+++ + VK+ D G AR + D +GN
Sbjct: 136 IEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD---SGNSVTQ 192
Query: 129 WQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIA 187
++ GT +++PE R + +D +D++SLGC++ E+ TG PP+ GD + A ++
Sbjct: 193 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR-- 250
Query: 188 CSNEKPHFPTQFFKKV---LD-FLAKCLERKPEKRW 219
E P P+ + + LD + K L + PE R+
Sbjct: 251 ---EDPIPPSARHEGLSADLDAVVLKALAKNPENRY 283
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+AGG + + G + R Y
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHA-RFYAA 148
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV ++W +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTW-XLC 199
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 255
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 256 RFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+AGG + + G + R Y
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHA-RFYAA 148
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV ++W +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTW-XLC 199
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 255
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 256 RFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+AGG + + G + R Y
Sbjct: 85 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHA-RFYAA 143
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV ++W +
Sbjct: 144 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTW-XLC 194
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 195 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 250
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 251 RFPSHFSSDLKDLLRNLLQVDLTKRF 276
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+AGG + + G + R Y
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHA-RFYAA 169
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV ++W +
Sbjct: 170 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTW-XLC 220
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 276
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 277 RFPSHFSSDLKDLLRNLLQVDLTKRF 302
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 26/245 (10%)
Query: 7 ALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY G++
Sbjct: 39 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 98
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+K D Y E+ H ++H D+K N+LLGS G++K+ D G +
Sbjct: 99 RELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 157
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWG 173
+ + GT ++ PE++ D D+WSLG + E G+PP+
Sbjct: 158 VHAPSSRRX--------XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF- 208
Query: 174 DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
+ + T +I S + FP + D +++ L+ P +R E+L H +I+ N
Sbjct: 209 -EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 265
Query: 234 AKKNS 238
+ K S
Sbjct: 266 SSKPS 270
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 26/245 (10%)
Query: 7 ALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY G++
Sbjct: 37 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 96
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+K D Y E+ H ++H D+K N+LLGS G++K+ D G +
Sbjct: 97 RELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWG 173
+ + GT ++ PE++ D D+WSLG + E G+PP+
Sbjct: 156 VHAPSSRRX--------XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF- 206
Query: 174 DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
+ + T +I S + FP + D +++ L+ P +R E+L H +I+ N
Sbjct: 207 -EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 263
Query: 234 AKKNS 238
+ K S
Sbjct: 264 SSKPS 268
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 96/219 (43%), Gaps = 20/219 (9%)
Query: 17 EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71
E V + E ++ L+ P + ++ + + Y G LL K G + D
Sbjct: 76 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDE 134
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNL 125
R YT EI LHG GI+H DLK N+LL +++ D G A+ ++
Sbjct: 135 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 194
Query: 126 KQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLK 185
GT +++PE+L + ++D+W+LGC++ ++ G PP+ + N K
Sbjct: 195 ----NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQK 248
Query: 186 IACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
I + FP FF K D + K L KR EE+
Sbjct: 249 II--KLEYDFPAAFFPKARDLVEKLLVLDATKRLGCEEM 285
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+AGG + + G + R Y
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHA-RFYAA 148
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV ++W +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTW-XLC 199
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 255
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 256 RFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+AGG + + G + R Y
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHA-RFYAA 148
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV ++W +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTW-XLC 199
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 255
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 256 RFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+AGG + + G + R Y
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV ++W +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTW-XLC 199
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 255
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 256 RFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+AGG + + G + R Y
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 149
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV ++W +
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTW-XLC 200
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 256
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 257 RFPSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+AGG + + G + R Y
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV ++W +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTW-XLC 199
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 255
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 256 RFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+AGG + + G + R Y
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV ++W +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTW-XLC 199
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 255
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 256 RFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+AGG + + G + R Y
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV ++W +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTW-XLC 199
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 255
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 256 RFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 110/226 (48%), Gaps = 31/226 (13%)
Query: 10 VVKSAESEAGVQALRNEAEIRQSLNSPNI------GRNGEKTVNIFMEYMAGGSLLDVAE 63
+V++A+ A +A RN I + + P I + G K + + +EY++GG L E
Sbjct: 58 IVRNAKDTAHTKAERN---ILEEVKHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLE 113
Query: 64 KFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLG-CARRV 116
+ G ++ Y EI LH GI++ DLK N++L G VKL D G C +
Sbjct: 114 REGIFMEDTAC-FYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172
Query: 117 NDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKI 176
+D G + ++ GT +MAPE+L G + A D WSLG ++ +M TG PP+ +
Sbjct: 173 HD----GTVTHTF---CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGE- 224
Query: 177 SNAAATLLKI-ACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSA 221
N T+ KI C P + TQ + D L K L+R R A
Sbjct: 225 -NRKKTIDKILKCKLNLPPYLTQ---EARDLLKKLLKRNAASRLGA 266
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+AGG + + G + R Y
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 169
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV +W ++
Sbjct: 170 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------ATW-TLC 220
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 276
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 277 RFPSHFSSDLKDLLRNLLQVDLTKRF 302
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+AGG + + G + R Y
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV ++W +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTW-XLC 199
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADEPIQIYEKIVSG-KV 255
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 256 RFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+AGG + + G + R Y
Sbjct: 77 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 135
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV ++W +
Sbjct: 136 QIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG--------RTW-XLC 186
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 187 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 242
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 243 RFPSHFSSDLKDLLRNLLQVDLTKRF 268
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 113/234 (48%), Gaps = 30/234 (12%)
Query: 2 NKGTGALFVVKSAESEAGVQALR-----NEAEIRQSLNSPNIGR---NGEKTVNIFM--E 51
+K TG + +K + + V+ + NE I+Q++N P + + + + N++M E
Sbjct: 63 HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLE 122
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLY------TKEILHGNGILHCDLKCNNVLLGSHGDV 105
Y GG + + G + R Y T E LH +++ DLK N+L+ G +
Sbjct: 123 YAPGGEMFSHLRRIGRFSEPHA-RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 181
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
K+ D G A+RV ++W + GT ++APE++ ++G + A D W+LG ++ EM
Sbjct: 182 KVADFGFAKRVKG--------RTW-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 166 ATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
A G PP+ ++ + + S K FP+ F + D L L+ KR+
Sbjct: 233 AAGYPPF---FADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 26/245 (10%)
Query: 7 ALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY G++
Sbjct: 39 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 98
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+K D Y E+ H ++H D+K N+LLGS G++K+ + G +
Sbjct: 99 RELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS 157
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWG 173
+ ++ GT ++ PE++ D D+WSLG + E G+PP+
Sbjct: 158 VHAPSSRRT--------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF- 208
Query: 174 DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
+ + T +I S + FP + D +++ L+ P +R E+L H +I+ N
Sbjct: 209 -EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 265
Query: 234 AKKNS 238
+ K S
Sbjct: 266 SSKPS 270
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 26/245 (10%)
Query: 7 ALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY G++
Sbjct: 40 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 99
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+K D Y E+ H ++H D+K N+LLGS G++K+ + G +
Sbjct: 100 RELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS 158
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWG 173
+ ++ GT ++ PE++ D D+WSLG + E G+PP+
Sbjct: 159 VHAPSSRRT--------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF- 209
Query: 174 DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
+ + T +I S + FP + D +++ L+ P +R E+L H +I+ N
Sbjct: 210 -EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 266
Query: 234 AKKNS 238
+ K S
Sbjct: 267 SSKPS 271
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 30/234 (12%)
Query: 2 NKGTGALFVVKSAESEAGVQALR-----NEAEIRQSLNSPNIGR-----NGEKTVNIFME 51
+K TG F +K + + V+ + NE I Q++N P + + + + ME
Sbjct: 62 HKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVME 121
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLY------TKEILHGNGILHCDLKCNNVLLGSHGDV 105
Y+ GG + + G + R Y T E LH +++ DLK N+L+ G +
Sbjct: 122 YVPGGEMFSHLRRIGRFSEPHA-RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 180
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
++ D G A+RV ++W + GT ++APE++ ++G + A D W+LG ++ EM
Sbjct: 181 QVTDFGFAKRVKG--------RTW-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 166 ATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
A G PP+ ++ + + S K FP+ F + D L L+ KR+
Sbjct: 232 AAGYPPF---FADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 30/234 (12%)
Query: 2 NKGTGALFVVKSAESEAGVQALR-----NEAEIRQSLNSPNIGR-----NGEKTVNIFME 51
+K TG F +K + + V+ + NE I Q++N P + + + + ME
Sbjct: 62 HKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVME 121
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLY------TKEILHGNGILHCDLKCNNVLLGSHGDV 105
Y+ GG + + G + R Y T E LH +++ DLK N+L+ G +
Sbjct: 122 YVPGGEMFSHLRRIGRFSEPHA-RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 180
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
++ D G A+RV ++W + GT ++APE++ ++G + A D W+LG ++ EM
Sbjct: 181 QVTDFGFAKRVKG--------RTW-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 166 ATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
A G PP+ ++ + + S K FP+ F + D L L+ KR+
Sbjct: 232 AAGYPPF---FADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 30/234 (12%)
Query: 2 NKGTGALFVVKSAESEAGVQALR-----NEAEIRQSLNSPNIGR-----NGEKTVNIFME 51
+K TG F +K + + V+ + NE I Q++N P + + + + ME
Sbjct: 62 HKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVME 121
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLY------TKEILHGNGILHCDLKCNNVLLGSHGDV 105
Y+ GG + + G + R Y T E LH +++ DLK N+L+ G +
Sbjct: 122 YVPGGEMFSHLRRIGRFSEPHA-RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 180
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
++ D G A+RV ++W + GT ++APE++ ++G + A D W+LG ++ EM
Sbjct: 181 QVTDFGFAKRVKG--------RTW-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 166 ATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
A G PP+ ++ + + S K FP+ F + D L L+ KR+
Sbjct: 232 AAGYPPF---FADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+ GG + + G + R Y
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +K+ D G A+RV ++W +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG--------RTW-XLC 199
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 255
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 256 RFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 113/248 (45%), Gaps = 26/248 (10%)
Query: 2 NKGTGALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMA 54
+K AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY
Sbjct: 35 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 94
Query: 55 GGSLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLP 108
G++ +K D Y E+ H ++H D+K N+LLGS G++K+
Sbjct: 95 LGTVYRELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 153
Query: 109 DLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATG 168
D G + + + GT ++ PE++ D D+WSLG + E G
Sbjct: 154 DFGWSVHAPSSRRX--------XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 205
Query: 169 RPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHT 228
+PP+ + + T +I S + FP + D +++ L+ P +R E+L H
Sbjct: 206 KPPF--EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 261
Query: 229 FISGNAKK 236
+I+ N+ K
Sbjct: 262 WITANSSK 269
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 26/241 (10%)
Query: 7 ALFVVKSAESE-AGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ A+ E AGV+ LR E EI+ L PNI R + V + +EY G++
Sbjct: 34 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 93
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+K D Y E+ H ++H D+K N+LLGS G++K+ D G +
Sbjct: 94 RELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 152
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWG 173
+ ++ GT ++ PE++ D D+WSLG + E G+PP+
Sbjct: 153 VHAPSSRRT--------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF- 203
Query: 174 DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
+ + T +I S + FP + D +++ L+ P +R E+L H +I+ N
Sbjct: 204 -EANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 260
Query: 234 A 234
+
Sbjct: 261 S 261
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 109/226 (48%), Gaps = 31/226 (13%)
Query: 10 VVKSAESEAGVQALRNEAEIRQSLNSPNI------GRNGEKTVNIFMEYMAGGSLLDVAE 63
+V++A+ A +A RN I + + P I + G K + + +EY++GG L E
Sbjct: 58 IVRNAKDTAHTKAERN---ILEEVKHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLE 113
Query: 64 KFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLG-CARRV 116
+ G ++ Y EI LH GI++ DLK N++L G VKL D G C +
Sbjct: 114 REGIFMEDTAC-FYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172
Query: 117 NDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKI 176
+D G + + GT +MAPE+L G + A D WSLG ++ +M TG PP+ +
Sbjct: 173 HD----GTVTHXF---CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGE- 224
Query: 177 SNAAATLLKI-ACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSA 221
N T+ KI C P + TQ + D L K L+R R A
Sbjct: 225 -NRKKTIDKILKCKLNLPPYLTQ---EARDLLKKLLKRNAASRLGA 266
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 110/234 (47%), Gaps = 30/234 (12%)
Query: 2 NKGTGALFVVKSAESEAGVQALR-----NEAEIRQSLNSPNIGR-----NGEKTVNIFME 51
+K TG + +K + + V+ + NE I Q++N P + + + + ME
Sbjct: 55 HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 114
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLY------TKEILHGNGILHCDLKCNNVLLGSHGDV 105
Y+ GG + + G + R Y T E LH +++ DLK N+L+ G +
Sbjct: 115 YVPGGEMFSHLRRIGRFXEPHA-RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 173
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
++ D G A+RV ++W + GT ++APE++ ++G + A D W+LG ++ EM
Sbjct: 174 QVTDFGFAKRVKG--------RTW-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 224
Query: 166 ATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
A G PP+ ++ + + S K FP+ F + D L L+ KR+
Sbjct: 225 AAGYPPF---FADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRF 274
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+AGG + + G + R Y
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+++ G +++ D G A+RV ++W +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG--------RTW-XLC 199
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 200 GTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 255
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 256 RFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+AGG + + G + R Y
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV ++W +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTW-XLC 199
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ +MA G PP+ ++ + + S K
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPF---FADQPIQIYEKIVSG-KV 255
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 256 RFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+ GG + + G + R Y
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAA 149
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV ++W ++
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTW-TLC 200
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 256
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 257 RFPSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+ GG + + G + R Y
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHA-RFYAA 148
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV ++W +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTW-XLC 199
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 255
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 256 RFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 25/241 (10%)
Query: 10 VVKSAESEAGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAE 63
+ K+ +AGV+ LR E EI+ L PNI R + V + +EY G++ +
Sbjct: 45 LFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 104
Query: 64 KFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN 117
K D Y E+ H ++H D+K N+LLGS+G++K+ D G +
Sbjct: 105 KLS-RFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAP 163
Query: 118 DLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKIS 177
+ + ++ GT ++ PE++ D D+WSLG + E G PP+ +
Sbjct: 164 SSRRD--------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF--EAH 213
Query: 178 NAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKN 237
T +I S + FP + D +++ L+ +R + E+L H +I N+ K
Sbjct: 214 TYQETYRRI--SRVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKANSSKP 271
Query: 238 S 238
S
Sbjct: 272 S 272
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY GG + + G + R Y
Sbjct: 91 NEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHA-RFYAA 149
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+++ G +K+ D G A+RV ++W +
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG--------RTW-XLC 200
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 256
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 257 RFPSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+ GG + + G + R Y
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHA-RFYAA 148
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV ++W +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTW-XLC 199
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 255
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 256 RFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+ GG + + G + R Y
Sbjct: 76 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAA 134
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV ++W ++
Sbjct: 135 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTW-TLC 185
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 186 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 241
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 242 RFPSHFSSDLKDLLRNLLQVDLTKRF 267
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+ GG + + G + R Y
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHA-RFYAA 149
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV ++W +
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTW-XLC 200
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 256
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 257 RFPSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 25/199 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+AGG + + G + R Y
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV ++W +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTW-XLC 199
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 255
Query: 194 HFPTQFFKKVLDFLAKCLE 212
FP+ F + D L L+
Sbjct: 256 RFPSHFSSDLKDLLRNLLQ 274
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 110/234 (47%), Gaps = 30/234 (12%)
Query: 2 NKGTGALFVVKSAESEAGVQALR-----NEAEIRQSLNSPNIGR-----NGEKTVNIFME 51
+K TG + +K + + V+ + NE I Q++N P + + + + ME
Sbjct: 55 HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 114
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLY------TKEILHGNGILHCDLKCNNVLLGSHGDV 105
Y+ GG + + G + R Y T E LH +++ DLK N+L+ G +
Sbjct: 115 YVPGGEMFSHLRRIGRFSEPHA-RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 173
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
++ D G A+RV ++W + GT ++APE++ ++G + A D W+LG ++ EM
Sbjct: 174 QVTDFGFAKRVKG--------RTW-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 224
Query: 166 ATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
A G PP+ ++ + + S K FP+ F + D L L+ KR+
Sbjct: 225 AAGYPPF---FADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRF 274
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 29/221 (13%)
Query: 10 VVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEK 64
VVK E E + NE I Q++N P + + + + MEY GG + +
Sbjct: 79 VVKLKEIEHTL----NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR 134
Query: 65 FGGTLDAGVIRLY------TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVND 118
G + R Y T E LH +++ DLK N+++ G +K+ D G A+RV
Sbjct: 135 IGRFSEPHA-RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG 193
Query: 119 LKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISN 178
++W + GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++
Sbjct: 194 --------RTW-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FAD 241
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
+ + S K FP+ F + D L L+ KR+
Sbjct: 242 QPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 110/234 (47%), Gaps = 30/234 (12%)
Query: 2 NKGTGALFVVKSAESEAGVQALR-----NEAEIRQSLNSPNIGR-----NGEKTVNIFME 51
+K TG + +K + + V+ + NE I Q++N P + + + + ME
Sbjct: 63 HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 122
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLY------TKEILHGNGILHCDLKCNNVLLGSHGDV 105
Y+ GG + + G + R Y T E LH +++ DLK N+L+ G +
Sbjct: 123 YVPGGEMFSHLRRIGRFSEPHA-RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 181
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
++ D G A+RV ++W + GT ++APE++ ++G + A D W+LG ++ EM
Sbjct: 182 QVTDFGFAKRVKG--------RTW-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 166 ATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
A G PP+ ++ + + S K FP+ F + D L L+ KR+
Sbjct: 233 AAGYPPF---FADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 110/234 (47%), Gaps = 30/234 (12%)
Query: 2 NKGTGALFVVKSAESEAGVQALR-----NEAEIRQSLNSPNIGR-----NGEKTVNIFME 51
+K TG + +K + + V+ + NE I Q++N P + + + + ME
Sbjct: 63 HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 122
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLY------TKEILHGNGILHCDLKCNNVLLGSHGDV 105
Y+ GG + + G + R Y T E LH +++ DLK N+L+ G +
Sbjct: 123 YVPGGEMFSHLRRIGRFSEPHA-RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 181
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
++ D G A+RV ++W + GT ++APE++ ++G + A D W+LG ++ EM
Sbjct: 182 QVTDFGFAKRVKG--------RTW-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 166 ATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
A G PP+ ++ + + S K FP+ F + D L L+ KR+
Sbjct: 233 AAGYPPF---FADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 110/234 (47%), Gaps = 30/234 (12%)
Query: 2 NKGTGALFVVKSAESEAGVQALR-----NEAEIRQSLNSPNIGR-----NGEKTVNIFME 51
+K TG + +K + + V+ + NE I Q++N P + + + + ME
Sbjct: 63 HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 122
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLY------TKEILHGNGILHCDLKCNNVLLGSHGDV 105
Y+ GG + + G + R Y T E LH +++ DLK N+L+ G +
Sbjct: 123 YVPGGEMFSHLRRIGRFSEPHA-RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 181
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
++ D G A+RV ++W + GT ++APE++ ++G + A D W+LG ++ EM
Sbjct: 182 QVTDFGFAKRVKG--------RTW-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 166 ATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
A G PP+ ++ + + S K FP+ F + D L L+ KR+
Sbjct: 233 AAGYPPF---FADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY GG + + G + R Y
Sbjct: 91 NEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA-RFYAA 149
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+++ G +K+ D G A+RV ++W +
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG--------RTW-XLC 200
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 256
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 257 RFPSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY GG + + G + R Y
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHA-RFYAA 148
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+++ G +K+ D G A+RV ++W +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG--------RTW-XLC 199
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 255
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 256 RFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 108/241 (44%), Gaps = 25/241 (10%)
Query: 10 VVKSAESEAGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAE 63
+ K+ +AGV+ LR E EI+ L PNI R + V + +EY G++ +
Sbjct: 45 LFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 104
Query: 64 KFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN 117
K D Y E+ H ++H D+K N+LLGS+G++K+ D G +
Sbjct: 105 KLS-RFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAP 163
Query: 118 DLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKIS 177
+ ++ GT ++ PE++ D D+WSLG + E G PP+ +
Sbjct: 164 SSRRT--------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF--EAH 213
Query: 178 NAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKN 237
T +I S + FP + D +++ L+ +R + E+L H +I N+ K
Sbjct: 214 TYQETYRRI--SRVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKANSSKP 271
Query: 238 S 238
S
Sbjct: 272 S 272
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY GG + + G + R Y
Sbjct: 91 NEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA-RFYAA 149
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+++ G +K+ D G A+RV ++W +
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG--------RTW-XLC 200
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 256
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 257 RFPSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+ GG + + G + R Y
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV ++W +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTW-XLC 199
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 255
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 256 RFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 110/234 (47%), Gaps = 30/234 (12%)
Query: 2 NKGTGALFVVKSAESEAGVQALR-----NEAEIRQSLNSPNIGR-----NGEKTVNIFME 51
+K TG + +K + + V+ + NE I Q++N P + + + + ME
Sbjct: 83 HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 142
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLY------TKEILHGNGILHCDLKCNNVLLGSHGDV 105
Y+ GG + + G + R Y T E LH +++ DLK N+L+ G +
Sbjct: 143 YVPGGEMFSHLRRIGRFSEPHA-RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI 201
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
++ D G A+RV ++W + GT ++APE++ ++G + A D W+LG ++ EM
Sbjct: 202 QVTDFGFAKRVKG--------RTW-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 252
Query: 166 ATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
A G PP+ ++ + + S K FP+ F + D L L+ KR+
Sbjct: 253 AAGYPPF---FADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRF 302
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+ GG + + G + R Y
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAA 149
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV ++W +
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTW-XLC 200
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 256
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 257 RFPSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+ GG + + G + R Y
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV ++W +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTW-XLC 199
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 255
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 256 RFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 109/234 (46%), Gaps = 30/234 (12%)
Query: 2 NKGTGALFVVKSAESEAGVQALR-----NEAEIRQSLNSPNIGR-----NGEKTVNIFME 51
+K TG + +K + + V+ + NE I Q++N P + + + + ME
Sbjct: 63 HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 122
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLY------TKEILHGNGILHCDLKCNNVLLGSHGDV 105
Y GG + + G + R Y T E LH +++ DLK N+++ G +
Sbjct: 123 YAPGGEMFSHLRRIGRFSEPHA-RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYI 181
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
K+ D G A+RV ++W + GT ++APE++ ++G + A D W+LG ++ EM
Sbjct: 182 KVTDFGFAKRVKG--------RTW-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 166 ATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
A G PP+ ++ + + S K FP+ F + D L L+ KR+
Sbjct: 233 AAGYPPF---FADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 117/254 (46%), Gaps = 33/254 (12%)
Query: 9 FVVKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEK 64
F + SA + E EI + LN P I + + I +E M GG L D K
Sbjct: 48 FAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFD---K 104
Query: 65 FGGT--LDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRV 116
G L +LY ++L H NGI+H DLK NVLL S + C ++
Sbjct: 105 VVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE------DCLIKI 158
Query: 117 NDLKNNGNLKQS--WQSIGGTQLWMAPEVLRN---EGLDFATDIWSLGCMVIEMATGRPP 171
D ++ L ++ +++ GT ++APEVL + G + A D WSLG ++ +G PP
Sbjct: 159 TDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
Query: 172 WGDKISNAAATLLKIACSNEKPHFPTQFF----KKVLDFLAKCLERKPEKRWSAEELLNH 227
+ + + + LK ++ K +F + + +K LD + K L P+ R++ EE L H
Sbjct: 219 FSEHRTQVS---LKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275
Query: 228 TFISGNAKKNSTEE 241
++ K ++
Sbjct: 276 PWLQDEDMKRKFQD 289
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 117/254 (46%), Gaps = 33/254 (12%)
Query: 9 FVVKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEK 64
F + SA + E EI + LN P I + + I +E M GG L D K
Sbjct: 48 FAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFD---K 104
Query: 65 FGGT--LDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRV 116
G L +LY ++L H NGI+H DLK NVLL S + C ++
Sbjct: 105 VVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE------DCLIKI 158
Query: 117 NDLKNNGNLKQS--WQSIGGTQLWMAPEVLRN---EGLDFATDIWSLGCMVIEMATGRPP 171
D ++ L ++ +++ GT ++APEVL + G + A D WSLG ++ +G PP
Sbjct: 159 TDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
Query: 172 WGDKISNAAATLLKIACSNEKPHFPTQFF----KKVLDFLAKCLERKPEKRWSAEELLNH 227
+ + + + LK ++ K +F + + +K LD + K L P+ R++ EE L H
Sbjct: 219 FSEHRTQVS---LKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275
Query: 228 TFISGNAKKNSTEE 241
++ K ++
Sbjct: 276 PWLQDEDMKRKFQD 289
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 21 QALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLD--VAEKFGGTLDAG- 72
Q L EA I + L PNI R + E + + + GG L + VA ++ DA
Sbjct: 66 QKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASH 125
Query: 73 VIRLYTKEILHGN--GILHCDLKCNNVLLGSH---GDVKLPDLGCARRVNDLKNNGNLKQ 127
I+ + +LH + G++H DLK N+LL S VKL D G A V +Q
Sbjct: 126 CIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVE------GEQQ 179
Query: 128 SWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIA 187
+W GT +++PEVLR + D+W+ G ++ + G PP+ D+ + +K
Sbjct: 180 AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAG 239
Query: 188 CSNEKPHFPTQFFKKVL----DFLAKCLERKPEKRWSAEELLNHTFIS 231
+ FP+ + V D + K L P KR +A E L H +IS
Sbjct: 240 AYD----FPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWIS 283
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+ GG + + G + R Y
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV ++W +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTW-XLC 199
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 255
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 256 RFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 117/254 (46%), Gaps = 33/254 (12%)
Query: 9 FVVKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEK 64
F + SA + E EI + LN P I + + I +E M GG L D K
Sbjct: 47 FAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFD---K 103
Query: 65 FGGT--LDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRV 116
G L +LY ++L H NGI+H DLK NVLL S + C ++
Sbjct: 104 VVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE------DCLIKI 157
Query: 117 NDLKNNGNLKQS--WQSIGGTQLWMAPEVLRN---EGLDFATDIWSLGCMVIEMATGRPP 171
D ++ L ++ +++ GT ++APEVL + G + A D WSLG ++ +G PP
Sbjct: 158 TDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 217
Query: 172 WGDKISNAAATLLKIACSNEKPHFPTQFF----KKVLDFLAKCLERKPEKRWSAEELLNH 227
+ + + + LK ++ K +F + + +K LD + K L P+ R++ EE L H
Sbjct: 218 FSEHRTQVS---LKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 274
Query: 228 TFISGNAKKNSTEE 241
++ K ++
Sbjct: 275 PWLQDEDMKRKFQD 288
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 117/254 (46%), Gaps = 33/254 (12%)
Query: 9 FVVKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEK 64
F + SA + E EI + LN P I + + I +E M GG L D K
Sbjct: 48 FAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFD---K 104
Query: 65 FGGT--LDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRV 116
G L +LY ++L H NGI+H DLK NVLL S + C ++
Sbjct: 105 VVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE------DCLIKI 158
Query: 117 NDLKNNGNLKQS--WQSIGGTQLWMAPEVLRN---EGLDFATDIWSLGCMVIEMATGRPP 171
D ++ L ++ +++ GT ++APEVL + G + A D WSLG ++ +G PP
Sbjct: 159 TDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
Query: 172 WGDKISNAAATLLKIACSNEKPHFPTQFF----KKVLDFLAKCLERKPEKRWSAEELLNH 227
+ + + + LK ++ K +F + + +K LD + K L P+ R++ EE L H
Sbjct: 219 FSEHRTQVS---LKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275
Query: 228 TFISGNAKKNSTEE 241
++ K ++
Sbjct: 276 PWLQDEDMKRKFQD 289
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 117/254 (46%), Gaps = 33/254 (12%)
Query: 9 FVVKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEK 64
F + SA + E EI + LN P I + + I +E M GG L D K
Sbjct: 54 FAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFD---K 110
Query: 65 FGGT--LDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRV 116
G L +LY ++L H NGI+H DLK NVLL S + C ++
Sbjct: 111 VVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE------DCLIKI 164
Query: 117 NDLKNNGNLKQS--WQSIGGTQLWMAPEVLRN---EGLDFATDIWSLGCMVIEMATGRPP 171
D ++ L ++ +++ GT ++APEVL + G + A D WSLG ++ +G PP
Sbjct: 165 TDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 224
Query: 172 WGDKISNAAATLLKIACSNEKPHFPTQFF----KKVLDFLAKCLERKPEKRWSAEELLNH 227
+ + + + LK ++ K +F + + +K LD + K L P+ R++ EE L H
Sbjct: 225 FSEHRTQVS---LKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 281
Query: 228 TFISGNAKKNSTEE 241
++ K ++
Sbjct: 282 PWLQDEDMKRKFQD 295
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY GG + + G + R Y
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+++ G +K+ D G A+RV ++W +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG--------RTW-XLC 199
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 255
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 256 RFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+AGG + + G + R Y
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV ++W +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTW-XLC 199
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT +APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 200 GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 255
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 256 RFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY+AGG + + G + R Y
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+L+ G +++ D G A+RV ++W +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--------RTW-XLC 199
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++AP ++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 200 GTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 255
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 256 RFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 111/232 (47%), Gaps = 32/232 (13%)
Query: 16 SEAGVQALRNEAEIRQSLNSPNIGRNGE-----KTVNIFMEYMAGGSLLD---VAEKFGG 67
S+ ++ + E E+ +SL+ PNI + E + I ME GG LL+ A+ G
Sbjct: 60 SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGK 119
Query: 68 TLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLL---GSHGDVKLPDLGCARRVND 118
L G + K+++ H ++H DLK N+L H +K+ D G A
Sbjct: 120 ALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS 179
Query: 119 LKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISN 178
+++ N GT L+MAPEV + + + F DIWS G ++ + TG P+ +
Sbjct: 180 DEHSTN-------AAGTALYMAPEVFKRD-VTFKCDIWSAGVVMYFLLTGCLPF----TG 227
Query: 179 AAATLLKIACSNEKPHFPTQ---FFKKVLDFLAKCLERKPEKRWSAEELLNH 227
+ ++ + ++P++ + + +D L + L + PE+R SA ++L+H
Sbjct: 228 TSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 117/254 (46%), Gaps = 33/254 (12%)
Query: 9 FVVKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEK 64
F + SA + E EI + LN P I + + I +E M GG L D K
Sbjct: 187 FAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFD---K 243
Query: 65 FGGT--LDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRV 116
G L +LY ++L H NGI+H DLK NVLL S + C ++
Sbjct: 244 VVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE------DCLIKI 297
Query: 117 NDLKNNGNLKQS--WQSIGGTQLWMAPEVLRN---EGLDFATDIWSLGCMVIEMATGRPP 171
D ++ L ++ +++ GT ++APEVL + G + A D WSLG ++ +G PP
Sbjct: 298 TDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 357
Query: 172 WGDKISNAAATLLKIACSNEKPHFPTQFF----KKVLDFLAKCLERKPEKRWSAEELLNH 227
+ + + + LK ++ K +F + + +K LD + K L P+ R++ EE L H
Sbjct: 358 FSEHRTQVS---LKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 414
Query: 228 TFISGNAKKNSTEE 241
++ K ++
Sbjct: 415 PWLQDEDMKRKFQD 428
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 117/254 (46%), Gaps = 33/254 (12%)
Query: 9 FVVKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEK 64
F + SA + E EI + LN P I + + I +E M GG L D K
Sbjct: 173 FAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFD---K 229
Query: 65 FGGT--LDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRV 116
G L +LY ++L H NGI+H DLK NVLL S + C ++
Sbjct: 230 VVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE------DCLIKI 283
Query: 117 NDLKNNGNLKQS--WQSIGGTQLWMAPEVLRN---EGLDFATDIWSLGCMVIEMATGRPP 171
D ++ L ++ +++ GT ++APEVL + G + A D WSLG ++ +G PP
Sbjct: 284 TDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
Query: 172 WGDKISNAAATLLKIACSNEKPHFPTQFF----KKVLDFLAKCLERKPEKRWSAEELLNH 227
+ + + + LK ++ K +F + + +K LD + K L P+ R++ EE L H
Sbjct: 344 FSEHRTQVS---LKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400
Query: 228 TFISGNAKKNSTEE 241
++ K ++
Sbjct: 401 PWLQDEDMKRKFQD 414
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 29/229 (12%)
Query: 21 QALRNEAEIRQSLNSPNIGR---------NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71
Q + EAE + L PNI R G+K + + E G+L ++F
Sbjct: 70 QRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFK-VXKI 128
Query: 72 GVIRLYTKEILHG--------NGILHCDLKCNNVLL-GSHGDVKLPDLGCARRVNDLKNN 122
V+R + ++IL G I+H DLKC+N+ + G G VK+ DLG A LK
Sbjct: 129 KVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA----TLKRA 184
Query: 123 GNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAAT 182
K ++ GT + APE E D + D+++ G +E AT P+ + NAA
Sbjct: 185 SFAK----AVIGTPEFXAPEXY-EEKYDESVDVYAFGXCXLEXATSEYPYSE-CQNAAQI 238
Query: 183 LLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFIS 231
++ + F +V + + C+ + ++R+S ++LLNH F
Sbjct: 239 YRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 287
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 29/221 (13%)
Query: 10 VVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEK 64
VVK E E + NE I Q++N P + + + + MEY GG + +
Sbjct: 79 VVKLKEIEHTL----NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR 134
Query: 65 FGGTLDAGVIRLY------TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVND 118
G + R Y T E LH +++ DLK N+++ G +++ D G A+RV
Sbjct: 135 IGRFSEPHA-RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG 193
Query: 119 LKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISN 178
++W + GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++
Sbjct: 194 --------RTW-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FAD 241
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
+ + S K FP+ F + D L L+ KR+
Sbjct: 242 QPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 117/258 (45%), Gaps = 28/258 (10%)
Query: 2 NKGTGALFVVK-----SAESEAGVQALRNEAEIRQSLNSPNIGRNGE-----KTVNIFME 51
+K TGA +K S + + AL +E + + L+ PNI + E + + ME
Sbjct: 25 DKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVME 84
Query: 52 YMAGGSLLD---VAEKFGGTLDAGVIR---LYTKEILHGNGILHCDLKCNNVLLGSHGD- 104
GG L D + +KF +DA VI L LH + I+H DLK N+LL S
Sbjct: 85 VYRGGELFDEIILRQKFS-EVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRD 143
Query: 105 --VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMV 162
+K+ D G + + G +K+ GT ++APEVLR + D D+WS G ++
Sbjct: 144 ALIKIVDFGLSAH---FEVGGKMKERL----GTAYYIAPEVLRKK-YDEKCDVWSCGVIL 195
Query: 163 IEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAE 222
+ G PP+G + ++ + P TQ + + L +P KR SAE
Sbjct: 196 YILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAE 255
Query: 223 ELLNHTFISGNAKKNSTE 240
E LNH +I + T+
Sbjct: 256 EALNHPWIVKFCSQKHTD 273
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 114/248 (45%), Gaps = 28/248 (11%)
Query: 2 NKGTGALFVVK-----SAESEAGVQALRNEAEIRQSLNSPNIGRNGE-----KTVNIFME 51
+K TGA +K S + + AL +E + + L+ PNI + E + + ME
Sbjct: 42 DKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVME 101
Query: 52 YMAGGSLLD---VAEKFGGTLDAGVIR---LYTKEILHGNGILHCDLKCNNVLLGSHGD- 104
GG L D + +KF +DA VI L LH + I+H DLK N+LL S
Sbjct: 102 VYRGGELFDEIILRQKFS-EVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRD 160
Query: 105 --VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMV 162
+K+ D G + + G +K+ GT ++APEVLR + D D+WS G ++
Sbjct: 161 ALIKIVDFGLSAH---FEVGGKMKERL----GTAYYIAPEVLRKK-YDEKCDVWSCGVIL 212
Query: 163 IEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAE 222
+ G PP+G + ++ + P TQ + + L +P KR SAE
Sbjct: 213 YILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAE 272
Query: 223 ELLNHTFI 230
E LNH +I
Sbjct: 273 EALNHPWI 280
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 115/242 (47%), Gaps = 30/242 (12%)
Query: 10 VVKSAESEAGVQALRNEAE-IRQS--LNSPNIGRNGEKTVNIFMEYMAGGSL---LDVAE 63
+V+ A++ + R E IRQS L + + E +++ ++Y+ GG L L E
Sbjct: 95 IVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE 154
Query: 64 KFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN 117
+F +++Y EI LH GI++ D+K N+LL S+G V L D G ++
Sbjct: 155 RFT----EHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF- 209
Query: 118 DLKNNGNLKQSWQSIGGTQLWMAPEVLR--NEGLDFATDIWSLGCMVIEMATGRPPWG-D 174
+ + GT +MAP+++R + G D A D WSLG ++ E+ TG P+ D
Sbjct: 210 ----VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD 265
Query: 175 KISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW-----SAEELLNHTF 229
N+ A + + +E P +P + D + + L + P+KR A+E+ H F
Sbjct: 266 GEKNSQAEISRRILKSEPP-YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF 324
Query: 230 IS 231
Sbjct: 325 FQ 326
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 110/251 (43%), Gaps = 32/251 (12%)
Query: 1 MNKGTGALFVVKSAE----SEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFME 51
++K TG F K S Q L EA I + L PNI R E + +
Sbjct: 26 VHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 85
Query: 52 YMAGGSLLD--VAEKFGGTLDAG-VIRLYTKEI--LHGNGILHCDLKCNNVLLGSHGD-- 104
+ GG L + VA +F DA I+ + I H NGI+H +LK N+LL S
Sbjct: 86 LVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 145
Query: 105 -VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVI 163
VKL D G A VND ++W GT +++PEVL+ + DIW+ G ++
Sbjct: 146 AVKLADFGLAIEVND-------SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILY 198
Query: 164 EMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVL----DFLAKCLERKPEKRW 219
+ G PP+ D+ + +K + +P+ + V + L P+KR
Sbjct: 199 ILLVGYPPFWDEDQHRLYAQIKAGAYD----YPSPEWDTVTPEAKSLIDSMLTVNPKKRI 254
Query: 220 SAEELLNHTFI 230
+A++ L +I
Sbjct: 255 TADQALKVPWI 265
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 20/181 (11%)
Query: 44 KTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNV 97
+ + + M+Y+ GG L + K V + Y E+ LH I++ DLK N+
Sbjct: 79 QQIFMIMDYIEGGELFSLLRK-SQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENI 137
Query: 98 LLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWS 157
LL +G +K+ D G A+ V D+ + GT ++APEV+ + + + D WS
Sbjct: 138 LLDKNGHIKITDFGFAKYVPDVT---------YXLCGTPDYIAPEVVSTKPYNKSIDWWS 188
Query: 158 LGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEK 217
G ++ EM G P+ D SN T KI N + FP F + V D L++ + R +
Sbjct: 189 FGILIYEMLAGYTPFYD--SNTMKTYEKIL--NAELRFPPFFNEDVKDLLSRLITRDLSQ 244
Query: 218 R 218
R
Sbjct: 245 R 245
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 109/248 (43%), Gaps = 26/248 (10%)
Query: 1 MNKGTGALFVVKSAE----SEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFME 51
++K TG F K S Q L EA I + L PNI R E + +
Sbjct: 49 VHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 108
Query: 52 YMAGGSLLD--VAEKFGGTLDAG-VIRLYTKEI--LHGNGILHCDLKCNNVLLGSHGD-- 104
+ GG L + VA +F DA I+ + I H NGI+H +LK N+LL S
Sbjct: 109 LVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 168
Query: 105 -VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVI 163
VKL D G A VND ++W GT +++PEVL+ + DIW+ G ++
Sbjct: 169 AVKLADFGLAIEVND-------SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILY 221
Query: 164 EMATGRPPWGDKISNAAATLLKI-ACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAE 222
+ G PP+ D+ + +K A P + T + + L P+KR +A+
Sbjct: 222 ILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT-VTPEAKSLIDSMLTVNPKKRITAD 280
Query: 223 ELLNHTFI 230
+ L +I
Sbjct: 281 QALKVPWI 288
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 105/227 (46%), Gaps = 27/227 (11%)
Query: 21 QALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLD--VAEKFGGTLDAG- 72
Q L EA I + L PNI R + E + + + GG L + VA ++ DA
Sbjct: 48 QKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH 107
Query: 73 VIRLYTKEI--LHGNGILHCDLKCNNVLLGSHGD---VKLPDLGCARRVNDLKNNGNLKQ 127
I+ + + H NGI+H DLK N+LL S VKL D G A V G+ +Q
Sbjct: 108 CIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQ-----GD-QQ 161
Query: 128 SWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIA 187
+W GT +++PEVLR + D+W+ G ++ + G PP+ D+ + +K
Sbjct: 162 AWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAG 221
Query: 188 CSNEKPHFPTQFFKKVL----DFLAKCLERKPEKRWSAEELLNHTFI 230
+ FP+ + V D + K L P KR +A E L H +I
Sbjct: 222 AYD----FPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 112/260 (43%), Gaps = 32/260 (12%)
Query: 1 MNKGTGALFVVKSAE----SEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFME 51
++K TG F K S Q L EA I + L PNI R E + +
Sbjct: 25 VHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 84
Query: 52 YMAGGSLLD--VAEKFGGTLDAG-VIRLYTKEI--LHGNGILHCDLKCNNVLLGSHGD-- 104
+ GG L + VA +F DA I+ + I H NGI+H +LK N+LL S
Sbjct: 85 LVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 144
Query: 105 -VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVI 163
VKL D G A VND ++W GT +++PEVL+ + DIW+ G ++
Sbjct: 145 AVKLADFGLAIEVND-------SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILY 197
Query: 164 EMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVL----DFLAKCLERKPEKRW 219
+ G PP+ D+ + +K + +P+ + V + L P+KR
Sbjct: 198 ILLVGYPPFWDEDQHRLYAQIKAGAYD----YPSPEWDTVTPEAKSLIDSMLTVNPKKRI 253
Query: 220 SAEELLNHTFISGNAKKNST 239
+A++ L +I + S
Sbjct: 254 TADQALKVPWICNRERVASA 273
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 112/260 (43%), Gaps = 32/260 (12%)
Query: 1 MNKGTGALFVVKSAE----SEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFME 51
++K TG F K S Q L EA I + L PNI R E + +
Sbjct: 26 VHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 85
Query: 52 YMAGGSLLD--VAEKFGGTLDAG-VIRLYTKEI--LHGNGILHCDLKCNNVLLGSHGD-- 104
+ GG L + VA +F DA I+ + I H NGI+H +LK N+LL S
Sbjct: 86 LVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 145
Query: 105 -VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVI 163
VKL D G A VND ++W GT +++PEVL+ + DIW+ G ++
Sbjct: 146 AVKLADFGLAIEVND-------SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILY 198
Query: 164 EMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVL----DFLAKCLERKPEKRW 219
+ G PP+ D+ + +K + +P+ + V + L P+KR
Sbjct: 199 ILLVGYPPFWDEDQHRLYAQIKAGAYD----YPSPEWDTVTPEAKSLIDSMLTVNPKKRI 254
Query: 220 SAEELLNHTFISGNAKKNST 239
+A++ L +I + S
Sbjct: 255 TADQALKVPWICNRERVASA 274
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 25/206 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY-- 77
NE I Q++N P + + + + MEY GG + + G + R Y
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 78 ----TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
T E LH +++ DLK N+++ G +++ D G A+RV ++W +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG--------RTW-XLC 199
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT ++APE++ ++G + A D W+LG ++ EMA G PP+ ++ + + S K
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF---FADQPIQIYEKIVSG-KV 255
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRW 219
FP+ F + D L L+ KR+
Sbjct: 256 RFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 120/282 (42%), Gaps = 77/282 (27%)
Query: 22 ALRN----EAEIRQSLNSPNI-GRNG----EKTVNIFMEYMAGGSLLDV-------AEKF 65
A+RN E ++ NSP I G G + ++I ME+M GGSL V E+
Sbjct: 56 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEI 115
Query: 66 GGTLDAGVIR--LYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNG 123
G + V+R Y +E + I+H D+K +N+L+ S G++KL D G + ++ D N
Sbjct: 116 LGKVSIAVLRGLAYLRE---KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN- 171
Query: 124 NLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPP------------ 171
S GT+ +MAPE L+ +DIWS+G ++E+A GR P
Sbjct: 172 -------SFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAI 224
Query: 172 WGDKISN-------------------------------AAATLLKIACSNEKPHFPTQFF 200
+G + + A LL + P P F
Sbjct: 225 FGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVF 284
Query: 201 KKVL-DFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+F+ KCL + P +R + L NHTFI K++ EE
Sbjct: 285 TPDFQEFVNKCLIKNPAERADLKMLTNHTFI----KRSEVEE 322
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 105/227 (46%), Gaps = 27/227 (11%)
Query: 21 QALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLD--VAEKFGGTLDAG- 72
Q L EA I + L PNI R + E + + + GG L + VA ++ DA
Sbjct: 48 QKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH 107
Query: 73 VIRLYTKEI--LHGNGILHCDLKCNNVLLGSHGD---VKLPDLGCARRVNDLKNNGNLKQ 127
I+ + + H NGI+H DLK N+LL S VKL D G A V G+ +Q
Sbjct: 108 CIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQ-----GD-QQ 161
Query: 128 SWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIA 187
+W GT +++PEVLR + D+W+ G ++ + G PP+ D+ + +K
Sbjct: 162 AWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAG 221
Query: 188 CSNEKPHFPTQFFKKVL----DFLAKCLERKPEKRWSAEELLNHTFI 230
+ FP+ + V D + K L P KR +A E L H +I
Sbjct: 222 AYD----FPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 114/255 (44%), Gaps = 38/255 (14%)
Query: 3 KGTGALFVVKSAE----SEAGVQALRNEAEIRQSLNSPNIGRNGEK-------TVNIFME 51
K G + V K + +EA Q L +E + + L PNI R ++ T+ I ME
Sbjct: 28 KSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVME 87
Query: 52 YMAGGSLLDVAEKFGGT-----LDAG-VIRLYTKEILH----------GNGILHCDLKCN 95
Y GG L V K GT LD V+R+ T+ L G+ +LH DLK
Sbjct: 88 YCEGGDLASVITK--GTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPA 145
Query: 96 NVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDI 155
NV L +VKL D G AR +N ++ + GT +M+PE + + +DI
Sbjct: 146 NVFLDGKQNVKLGDFGLARILNHDEDFA------KEFVGTPYYMSPEQMNRMSYNEKSDI 199
Query: 156 WSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKP 215
WSLGC++ E+ PP+ A ++ + P ++ ++ + + + L K
Sbjct: 200 WSLGCLLYELCALMPPFTAFSQKELAGKIR---EGKFRRIPYRYSDELNEIITRMLNLKD 256
Query: 216 EKRWSAEELLNHTFI 230
R S EE+L + I
Sbjct: 257 YHRPSVEEILENPLI 271
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 117/255 (45%), Gaps = 38/255 (14%)
Query: 3 KGTGALFVVKSAE----SEAGVQALRNEAEIRQSLNSPNIGRNGEK-------TVNIFME 51
K G + V K + +EA Q L +E + + L PNI R ++ T+ I ME
Sbjct: 28 KSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVME 87
Query: 52 YMAGGSLLDVAEKFGGT-----LDAG-VIRLYTKEILH----------GNGILHCDLKCN 95
Y GG L V K GT LD V+R+ T+ L G+ +LH DLK
Sbjct: 88 YCEGGDLASVITK--GTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPA 145
Query: 96 NVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDI 155
NV L +VKL D G AR +N ++ + +++ GT +M+PE + + +DI
Sbjct: 146 NVFLDGKQNVKLGDFGLARILN---HDTSFAKTFV---GTPYYMSPEQMNRMSYNEKSDI 199
Query: 156 WSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKP 215
WSLGC++ E+ PP+ A ++ + P ++ ++ + + + L K
Sbjct: 200 WSLGCLLYELCALMPPFTAFSQKELAGKIR---EGKFRRIPYRYSDELNEIITRMLNLKD 256
Query: 216 EKRWSAEELLNHTFI 230
R S EE+L + I
Sbjct: 257 YHRPSVEEILENPLI 271
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 21 QALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLD--VAEKFGGTLDAG- 72
Q L EA I + L PNI R + E + + + GG L + VA ++ DA
Sbjct: 55 QKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASH 114
Query: 73 VIRLYTKEILHGN--GILHCDLKCNNVLLGSH---GDVKLPDLGCARRVNDLKNNGNLKQ 127
I+ + +LH + G++H +LK N+LL S VKL D G A V +Q
Sbjct: 115 CIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE------GEQQ 168
Query: 128 SWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIA 187
+W GT +++PEVLR + D+W+ G ++ + G PP+ D+ + +K
Sbjct: 169 AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAG 228
Query: 188 CSNEKPHFPTQFFKKVL----DFLAKCLERKPEKRWSAEELLNHTFIS 231
+ FP+ + V D + K L P KR +A E L H +IS
Sbjct: 229 AYD----FPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWIS 272
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 117/255 (45%), Gaps = 38/255 (14%)
Query: 3 KGTGALFVVKSAE----SEAGVQALRNEAEIRQSLNSPNIGRNGEK-------TVNIFME 51
K G + V K + +EA Q L +E + + L PNI R ++ T+ I ME
Sbjct: 28 KSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVME 87
Query: 52 YMAGGSLLDVAEKFGGT-----LDAG-VIRLYTKEILH----------GNGILHCDLKCN 95
Y GG L V K GT LD V+R+ T+ L G+ +LH DLK
Sbjct: 88 YCEGGDLASVITK--GTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPA 145
Query: 96 NVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDI 155
NV L +VKL D G AR +N ++ + +++ GT +M+PE + + +DI
Sbjct: 146 NVFLDGKQNVKLGDFGLARILN---HDTSFAKAFV---GTPYYMSPEQMNRMSYNEKSDI 199
Query: 156 WSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKP 215
WSLGC++ E+ PP+ A ++ + P ++ ++ + + + L K
Sbjct: 200 WSLGCLLYELCALMPPFTAFSQKELAGKIR---EGKFRRIPYRYSDELNEIITRMLNLKD 256
Query: 216 EKRWSAEELLNHTFI 230
R S EE+L + I
Sbjct: 257 YHRPSVEEILENPLI 271
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 22/208 (10%)
Query: 26 EAEIRQSLNSPNIGRNG-----EKTVNIFMEYMAGGSLLDVAEKFGG----TLDAGVIRL 76
E ++ + LN PN+ + + +NI +E G L + + F + V +
Sbjct: 82 EIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKY 141
Query: 77 YTK-----EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQS 131
+ + E +H ++H D+K NV + + G VKL DLG R + + S
Sbjct: 142 FVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAH------S 195
Query: 132 IGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPP-WGDKISNAAATLLKIACSN 190
+ GT +M+PE + G +F +DIWSLGC++ EMA + P +GDK+ N + KI +
Sbjct: 196 LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-NLYSLCKKIEQCD 254
Query: 191 EKPHFPTQFFKKVLDFLAKCLERKPEKR 218
P + +++ + C+ PEKR
Sbjct: 255 YPPLPSDHYSEELRQLVNMCINPDPEKR 282
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 17/193 (8%)
Query: 46 VNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLL 99
V + +E SLL++ ++ L R Y ++I LH N ++H DLK N+ L
Sbjct: 96 VFVVLELCRRRSLLELHKR-RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL 154
Query: 100 GSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLG 159
+VK+ D G A +V + +G K++ + GT ++APEVL +G F D+WS+G
Sbjct: 155 NEDLEVKIGDFGLATKV---EYDGERKKT---LCGTPNYIAPEVLSKKGHSFEVDVWSIG 208
Query: 160 CMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
C++ + G+PP+ + S T L+I NE P + K L+ P R
Sbjct: 209 CIMYTLLVGKPPF--ETSCLKETYLRIK-KNEY-SIPKHINPVAASLIQKMLQTDPTARP 264
Query: 220 SAEELLNHTFISG 232
+ ELLN F +
Sbjct: 265 TINELLNDEFFTS 277
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 17/193 (8%)
Query: 46 VNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLL 99
V + +E SLL++ ++ L R Y ++I LH N ++H DLK N+ L
Sbjct: 92 VFVVLELCRRRSLLELHKR-RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL 150
Query: 100 GSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLG 159
+VK+ D G A +V + +G K++ + GT ++APEVL +G F D+WS+G
Sbjct: 151 NEDLEVKIGDFGLATKV---EYDGERKKT---LCGTPNYIAPEVLSKKGHSFEVDVWSIG 204
Query: 160 CMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
C++ + G+PP+ + S T L+I NE P + K L+ P R
Sbjct: 205 CIMYTLLVGKPPF--ETSCLKETYLRIK-KNEY-SIPKHINPVAASLIQKMLQTDPTARP 260
Query: 220 SAEELLNHTFISG 232
+ ELLN F +
Sbjct: 261 TINELLNDEFFTS 273
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 17/193 (8%)
Query: 46 VNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLL 99
V + +E SLL++ ++ L R Y ++I LH N ++H DLK N+ L
Sbjct: 92 VFVVLELCRRRSLLELHKR-RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL 150
Query: 100 GSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLG 159
+VK+ D G A +V + +G K++ + GT ++APEVL +G F D+WS+G
Sbjct: 151 NEDLEVKIGDFGLATKV---EYDGERKKT---LCGTPNYIAPEVLSKKGHSFEVDVWSIG 204
Query: 160 CMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
C++ + G+PP+ + S T L+I NE P + K L+ P R
Sbjct: 205 CIMYTLLVGKPPF--ETSCLKETYLRIK-KNEY-SIPKHINPVAASLIQKMLQTDPTARP 260
Query: 220 SAEELLNHTFISG 232
+ ELLN F +
Sbjct: 261 TINELLNDEFFTS 273
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 108/225 (48%), Gaps = 21/225 (9%)
Query: 21 QALRNEAEIRQSLNSPNI-GRNG----EKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIR 75
+ + E I +SL++P++ G +G + V + +E SLL++ ++ +
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 76 LYTKEI-----LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQ 130
+ I LH N ++H DLK N+ L DVK+ D G A ++ + +G K++
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI---EFDGERKKT-- 201
Query: 131 SIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN 190
+ GT ++APEVL +G F DIWSLGC++ + G+PP+ + S T ++I N
Sbjct: 202 -LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF--ETSCLKETYIRIK-KN 257
Query: 191 EKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL-NHTFISGNA 234
E P + + L P R S ELL + F SG A
Sbjct: 258 EY-SVPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYA 301
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 121/257 (47%), Gaps = 41/257 (15%)
Query: 1 MNKGTGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGRNGEKTVNI------------ 48
++K TG + K + Q R AEI + + ++ + +N+
Sbjct: 49 ISKSTGQEYAAKFLKKRRRGQDCR--AEILHEIAVLELAKSCPRVINLHEVYENTSEIIL 106
Query: 49 FMEYMAGGSLLDVA--EKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLG 100
+EY AGG + + E + VIRL K+IL H N I+H DLK N+LL
Sbjct: 107 ILEYAAGGEIFSLCLPELAEMVSENDVIRL-IKQILEGVYYLHQNNIVHLDLKPQNILLS 165
Query: 101 S---HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWS 157
S GD+K+ D G +R++ + L++ I GT ++APE+L + + ATD+W+
Sbjct: 166 SIYPLGDIKIVDFGMSRKIG---HACELRE----IMGTPEYLAPEILNYDPITTATDMWN 218
Query: 158 LGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKV----LDFLAKCLER 213
+G + + T P+ + + T L I+ N + + F V DF+ L +
Sbjct: 219 IGIIAYMLLTHTSPFVGE--DNQETYLNISQVNVD--YSEETFSSVSQLATDFIQSLLVK 274
Query: 214 KPEKRWSAEELLNHTFI 230
PEKR +AE L+H+++
Sbjct: 275 NPEKRPTAEICLSHSWL 291
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 107/225 (47%), Gaps = 21/225 (9%)
Query: 21 QALRNEAEIRQSLNSPNI-GRNG----EKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIR 75
+ + E I +SL++P++ G +G + V + +E SLL++ ++ +
Sbjct: 71 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY 130
Query: 76 LYTKEI-----LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQ 130
+ I LH N ++H DLK N+ L DVK+ D G A ++ + +G K+
Sbjct: 131 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI---EFDGERKKD-- 185
Query: 131 SIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN 190
+ GT ++APEVL +G F DIWSLGC++ + G+PP+ + S T ++I N
Sbjct: 186 -LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF--ETSCLKETYIRIK-KN 241
Query: 191 EKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL-NHTFISGNA 234
E P + + L P R S ELL + F SG A
Sbjct: 242 EY-SVPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYA 285
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 97/209 (46%), Gaps = 23/209 (11%)
Query: 1 MNKGTGALFVVKSAESEAGVQA--LRNEAEIRQSLNSPNIGRN-------GEKTVNIFME 51
+ TGAL VK + Q + E +I ++L+S I + G +++ + ME
Sbjct: 35 LGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVME 94
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDV 105
Y+ G L D ++ LDA + LY+ +I G L H DL N+L+ S V
Sbjct: 95 YLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHV 154
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
K+ D G A+ + K+ +++ QS W APE L + +D+WS G ++ E+
Sbjct: 155 KIADFGLAKLLPLDKDYYVVREPGQS---PIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 211
Query: 166 ATGRPPWGDKISNAAATLLK-IACSNEKP 193
T + DK + +A L+ + C + P
Sbjct: 212 FT----YCDKSCSPSAEFLRMMGCERDVP 236
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 107/225 (47%), Gaps = 21/225 (9%)
Query: 21 QALRNEAEIRQSLNSPNI-GRNG----EKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIR 75
+ + E I +SL++P++ G +G + V + +E SLL++ ++ +
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 76 LYTKEI-----LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQ 130
+ I LH N ++H DLK N+ L DVK+ D G A ++ + +G K+
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI---EFDGERKKD-- 201
Query: 131 SIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN 190
+ GT ++APEVL +G F DIWSLGC++ + G+PP+ + S T ++I N
Sbjct: 202 -LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF--ETSCLKETYIRIK-KN 257
Query: 191 EKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL-NHTFISGNA 234
E P + + L P R S ELL + F SG A
Sbjct: 258 EY-SVPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYA 301
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 97/209 (46%), Gaps = 23/209 (11%)
Query: 1 MNKGTGALFVVKSAESEAGVQA--LRNEAEIRQSLNSPNIGRN-------GEKTVNIFME 51
+ TGAL VK + Q + E +I ++L+S I + G +++ + ME
Sbjct: 47 LGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVME 106
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDV 105
Y+ G L D ++ LDA + LY+ +I G L H DL N+L+ S V
Sbjct: 107 YLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHV 166
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
K+ D G A+ + K+ +++ QS W APE L + +D+WS G ++ E+
Sbjct: 167 KIADFGLAKLLPLDKDYYVVREPGQS---PIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 223
Query: 166 ATGRPPWGDKISNAAATLLK-IACSNEKP 193
T + DK + +A L+ + C + P
Sbjct: 224 FT----YCDKSCSPSAEFLRMMGCERDVP 248
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 17/193 (8%)
Query: 46 VNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLL 99
V + +E SLL++ ++ L R Y ++I LH N ++H DLK N+ L
Sbjct: 114 VFVVLELCRRRSLLELHKR-RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL 172
Query: 100 GSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLG 159
+VK+ D G A +V + +G K+ + GT ++APEVL +G F D+WS+G
Sbjct: 173 NEDLEVKIGDFGLATKV---EYDGERKKV---LCGTPNYIAPEVLSKKGHSFEVDVWSIG 226
Query: 160 CMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
C++ + G+PP+ + S T L+I NE P + K L+ P R
Sbjct: 227 CIMYTLLVGKPPF--ETSCLKETYLRIK-KNEY-SIPKHINPVAASLIQKMLQTDPTARP 282
Query: 220 SAEELLNHTFISG 232
+ ELLN F +
Sbjct: 283 TINELLNDEFFTS 295
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 107/225 (47%), Gaps = 21/225 (9%)
Query: 21 QALRNEAEIRQSLNSPNI-GRNG----EKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIR 75
+ + E I +SL++P++ G +G + V + +E SLL++ ++ +
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 76 LYTKEI-----LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQ 130
+ I LH N ++H DLK N+ L DVK+ D G A ++ + +G K+
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI---EFDGERKKX-- 201
Query: 131 SIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN 190
+ GT ++APEVL +G F DIWSLGC++ + G+PP+ + S T ++I N
Sbjct: 202 -LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF--ETSCLKETYIRIK-KN 257
Query: 191 EKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL-NHTFISGNA 234
E P + + L P R S ELL + F SG A
Sbjct: 258 EY-SVPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYA 301
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 17/193 (8%)
Query: 46 VNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLL 99
V + +E SLL++ ++ L R Y ++I LH N ++H DLK N+ L
Sbjct: 116 VFVVLELCRRRSLLELHKR-RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL 174
Query: 100 GSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLG 159
+VK+ D G A +V + +G K+ + GT ++APEVL +G F D+WS+G
Sbjct: 175 NEDLEVKIGDFGLATKV---EYDGERKKV---LCGTPNYIAPEVLSKKGHSFEVDVWSIG 228
Query: 160 CMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
C++ + G+PP+ + S T L+I NE P + K L+ P R
Sbjct: 229 CIMYTLLVGKPPF--ETSCLKETYLRIK-KNEY-SIPKHINPVAASLIQKMLQTDPTARP 284
Query: 220 SAEELLNHTFISG 232
+ ELLN F +
Sbjct: 285 TINELLNDEFFTS 297
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 110/248 (44%), Gaps = 26/248 (10%)
Query: 2 NKGTGALFVV-KSAESEAGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMA 54
NK AL V+ KS + GV+ LR E EI+ L PNI R + K + + +E+
Sbjct: 39 NKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAP 98
Query: 55 GGSLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLP 108
G L +K G D + +E+ H ++H D+K N+L+G G++K+
Sbjct: 99 RGELYKELQK-HGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIA 157
Query: 109 DLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATG 168
D G + L+ + + GT ++ PE++ + D D+W G + E G
Sbjct: 158 DFGWSVHAPSLRR--------RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
Query: 169 RPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHT 228
PP+ + T +I + K FP D ++K L P +R + ++ H
Sbjct: 210 MPPFDS--PSHTETHRRIVNVDLK--FPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHP 265
Query: 229 FISGNAKK 236
++ N+++
Sbjct: 266 WVKANSRR 273
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 17/193 (8%)
Query: 46 VNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLL 99
V + +E SLL++ ++ L R Y ++I LH N ++H DLK N+ L
Sbjct: 90 VFVVLELCRRRSLLELHKR-RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL 148
Query: 100 GSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLG 159
+VK+ D G A +V + +G K+ + GT ++APEVL +G F D+WS+G
Sbjct: 149 NEDLEVKIGDFGLATKV---EYDGERKKV---LCGTPNYIAPEVLSKKGHSFEVDVWSIG 202
Query: 160 CMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
C++ + G+PP+ + S T L+I NE P + K L+ P R
Sbjct: 203 CIMYTLLVGKPPF--ETSCLKETYLRIK-KNEY-SIPKHINPVAASLIQKMLQTDPTARP 258
Query: 220 SAEELLNHTFISG 232
+ ELLN F +
Sbjct: 259 TINELLNDEFFTS 271
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 110/248 (44%), Gaps = 26/248 (10%)
Query: 2 NKGTGALFVV-KSAESEAGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMA 54
NK AL V+ KS + GV+ LR E EI+ L PNI R + K + + +E+
Sbjct: 38 NKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAP 97
Query: 55 GGSLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLP 108
G L +K G D + +E+ H ++H D+K N+L+G G++K+
Sbjct: 98 RGELYKELQK-HGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIA 156
Query: 109 DLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATG 168
D G + L+ + + GT ++ PE++ + D D+W G + E G
Sbjct: 157 DFGWSVHAPSLRR--------RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
Query: 169 RPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHT 228
PP+ + T +I + K FP D ++K L P +R + ++ H
Sbjct: 209 MPPFDS--PSHTETHRRIVNVDLK--FPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHP 264
Query: 229 FISGNAKK 236
++ N+++
Sbjct: 265 WVKANSRR 272
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 110/248 (44%), Gaps = 26/248 (10%)
Query: 2 NKGTGALFVV-KSAESEAGVQ-ALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMA 54
NK AL V+ KS + GV+ LR E EI+ L PNI R + K + + +E+
Sbjct: 38 NKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAP 97
Query: 55 GGSLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLP 108
G L +K G D + +E+ H ++H D+K N+L+G G++K+
Sbjct: 98 RGELYKELQK-HGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIA 156
Query: 109 DLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATG 168
D G + L+ + + GT ++ PE++ + D D+W G + E G
Sbjct: 157 DFGWSVHAPSLRR--------RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
Query: 169 RPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHT 228
PP+ + T +I + K FP D ++K L P +R + ++ H
Sbjct: 209 MPPFDS--PSHTETHRRIVNVDLK--FPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHP 264
Query: 229 FISGNAKK 236
++ N+++
Sbjct: 265 WVKANSRR 272
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 114/245 (46%), Gaps = 23/245 (9%)
Query: 5 TGALFVVKSAESEAGVQ--ALRNEAEIRQSLNSPNIGR---NGEKTVNIF--MEYMAGGS 57
TG LF +K + + +L NE + + + NI E T + + M+ ++GG
Sbjct: 33 TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGE 92
Query: 58 LLDVAEKFGGTL--DAGVI---RLYTKEILHGNGILHCDLKCNNVLLGS---HGDVKLPD 109
L D + G DA ++ L + LH NGI+H DLK N+L + + + + D
Sbjct: 93 LFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITD 152
Query: 110 LGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGR 169
G ++ ++ NG + + GT ++APEVL + A D WS+G + + G
Sbjct: 153 FGLSK----MEQNGIMSTA----CGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGY 204
Query: 170 PPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTF 229
PP+ ++ + +K + F + DF+ LE+ P +R++ E+ L+H +
Sbjct: 205 PPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPW 264
Query: 230 ISGNA 234
I GN
Sbjct: 265 IDGNT 269
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 22/201 (10%)
Query: 1 MNKGTGALFVVKSAESEAGVQA--LRNEAEIRQSLNSPNIGRN-------GEKTVNIFME 51
+ TGAL VK + Q + E +I ++L+S I + G +++ + ME
Sbjct: 34 LGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVME 93
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDV 105
Y+ G L D ++ LDA + LY+ +I G L H DL N+L+ S V
Sbjct: 94 YLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHV 153
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
K+ D G A+ + K+ +++ QS W APE L + +D+WS G ++ E+
Sbjct: 154 KIADFGLAKLLPLDKDYYVVREPGQS---PIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 210
Query: 166 ATGRPPWGDKISNAAATLLKI 186
T + DK + +A L++
Sbjct: 211 FT----YCDKSCSPSAEFLRM 227
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 25/252 (9%)
Query: 3 KGTGALFVVKSAESEA---GVQALRNEAEIRQSLNSPNIG-----RNGEKTVNIFMEYMA 54
K TG LF VK +A ++ NE + + + NI + + M+ ++
Sbjct: 44 KATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVS 103
Query: 55 GGSLLD-VAEK-FGGTLDAG-VIRLYTKEI--LHGNGILHCDLKCNNVLLGSHGD---VK 106
GG L D + EK F DA +IR + LH GI+H DLK N+L S + +
Sbjct: 104 GGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIM 163
Query: 107 LPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMA 166
+ D G ++ ++ G++ + GT ++APEVL + A D WS+G + +
Sbjct: 164 ISDFGLSK----MEGKGDV---MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 216
Query: 167 TGRPPWGDK-ISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
G PP+ D+ S +LK + P++ DF+ +E+ P KR++ E+
Sbjct: 217 CGYPPFYDENDSKLFEQILKAEYEFDSPYW-DDISDSAKDFIRNLMEKDPNKRYTCEQAA 275
Query: 226 NHTFISGNAKKN 237
H +I+G+ N
Sbjct: 276 RHPWIAGDTALN 287
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 84/182 (46%), Gaps = 23/182 (12%)
Query: 47 NIF--MEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVL 98
N+F MEY+ GG L+ + D Y EI LH GI++ DLK +N+L
Sbjct: 93 NLFFVMEYLNGGDLMYHIQS-CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNIL 151
Query: 99 LGSHGDVKLPDLGCARR--VNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIW 156
L G +K+ D G + + D K N GT ++APE+L + + + D W
Sbjct: 152 LDKDGHIKIADFGMCKENMLGDAKTN--------EFCGTPDYIAPEILLGQKYNHSVDWW 203
Query: 157 SLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPE 216
S G ++ EM G+ P+ + +++ + P +P K+ D L K R+PE
Sbjct: 204 SFGVLLYEMLIGQSPFHGQDEEELFHSIRM----DNPFYPRWLEKEAKDLLVKLFVREPE 259
Query: 217 KR 218
KR
Sbjct: 260 KR 261
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 23/209 (11%)
Query: 1 MNKGTGALFVVKSAESEAGVQA--LRNEAEIRQSLNSPNIGRN-------GEKTVNIFME 51
+ TGAL VK + Q + E +I ++L+S I + G + + ME
Sbjct: 31 LGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVME 90
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDV 105
Y+ G L D ++ LDA + LY+ +I G L H DL N+L+ S V
Sbjct: 91 YLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHV 150
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
K+ D G A+ + K+ +++ QS W APE L + +D+WS G ++ E+
Sbjct: 151 KIADFGLAKLLPLDKDXXVVREPGQS---PIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 207
Query: 166 ATGRPPWGDKISNAAATLLK-IACSNEKP 193
T + DK + +A L+ + C + P
Sbjct: 208 FT----YCDKSCSPSAEFLRMMGCERDVP 232
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 95/200 (47%), Gaps = 20/200 (10%)
Query: 44 KTVNIFMEYMAGGSLLD--VAEKFGGTLDAGVIRLY---TKEILHGNGILHCDLKCNNVL 98
K V + E M GG LLD + +KF +A + T E LH G++H DLK +N+L
Sbjct: 89 KYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNIL 148
Query: 99 L----GSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATD 154
G+ +++ D G A+++ NG L + ++APEVL +G D A D
Sbjct: 149 YVDESGNPESIRICDFGFAKQLR--AENGLLMTPCYTAN----FVAPEVLERQGYDAACD 202
Query: 155 IWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVL----DFLAKC 210
IWSLG ++ M TG P+ + + +L S K ++ V D ++K
Sbjct: 203 IWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSG-KFSLSGGYWNSVSDTAKDLVSKM 261
Query: 211 LERKPEKRWSAEELLNHTFI 230
L P +R +A +L H +I
Sbjct: 262 LHVDPHQRLTAALVLRHPWI 281
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 84/182 (46%), Gaps = 23/182 (12%)
Query: 47 NIF--MEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVL 98
N+F MEY+ GG L+ + D Y EI LH GI++ DLK +N+L
Sbjct: 92 NLFFVMEYLNGGDLMYHIQS-CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNIL 150
Query: 99 LGSHGDVKLPDLGCARR--VNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIW 156
L G +K+ D G + + D K N GT ++APE+L + + + D W
Sbjct: 151 LDKDGHIKIADFGMCKENMLGDAKTN--------XFCGTPDYIAPEILLGQKYNHSVDWW 202
Query: 157 SLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPE 216
S G ++ EM G+ P+ + +++ + P +P K+ D L K R+PE
Sbjct: 203 SFGVLLYEMLIGQSPFHGQDEEELFHSIRM----DNPFYPRWLEKEAKDLLVKLFVREPE 258
Query: 217 KR 218
KR
Sbjct: 259 KR 260
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 27/227 (11%)
Query: 21 QALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLD--VAEKFGGTLDAG- 72
Q L EA I + L NI R + E + + + GG L + VA ++ DA
Sbjct: 48 QKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH 107
Query: 73 VIRLYTKEILHGN--GILHCDLKCNNVLLGSH---GDVKLPDLGCARRVNDLKNNGNLKQ 127
I+ + +LH + G++H DLK N+LL S VKL D G A V G+ +Q
Sbjct: 108 CIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ-----GD-QQ 161
Query: 128 SWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIA 187
+W GT +++PEVLR E DIW+ G ++ + G PP+ D+ + +K
Sbjct: 162 AWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAG 221
Query: 188 CSNEKPHFPTQFFKKVL----DFLAKCLERKPEKRWSAEELLNHTFI 230
+ FP+ + V + + + L P KR +A E L H ++
Sbjct: 222 AYD----FPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWV 264
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 118/249 (47%), Gaps = 25/249 (10%)
Query: 2 NKGTGALFVVKSAESEA--GVQ-ALRNEAEIRQSLNSPNIGRNGEKT-----VNIFMEYM 53
+K T L +K EA G + ++ NE + + PNI + + + M+ +
Sbjct: 39 DKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLV 98
Query: 54 AGGSLLD-VAEK-FGGTLDAGVI---RLYTKEILHGNGILHCDLKCNNVL---LGSHGDV 105
+GG L D + EK F DA + L + LH GI+H DLK N+L L +
Sbjct: 99 SGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKI 158
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
+ D G ++ +++ G++ + GT ++APEVL + A D WS+G + +
Sbjct: 159 MISDFGLSK----MEDPGSV---LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYIL 211
Query: 166 ATGRPPWGDK-ISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
G PP+ D+ + +LK + P++ DF+ +E+ PEKR++ E+
Sbjct: 212 LCGYPPFYDENDAKLFEQILKAEYEFDSPYW-DDISDSAKDFIRHLMEKDPEKRFTCEQA 270
Query: 225 LNHTFISGN 233
L H +I+G+
Sbjct: 271 LQHPWIAGD 279
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 118/249 (47%), Gaps = 25/249 (10%)
Query: 2 NKGTGALFVVKSAESEA--GVQ-ALRNEAEIRQSLNSPNIGRNGEKT-----VNIFMEYM 53
+K T L +K EA G + ++ NE + + PNI + + + M+ +
Sbjct: 39 DKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLV 98
Query: 54 AGGSLLD-VAEK-FGGTLDAGVI---RLYTKEILHGNGILHCDLKCNNVL---LGSHGDV 105
+GG L D + EK F DA + L + LH GI+H DLK N+L L +
Sbjct: 99 SGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKI 158
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
+ D G ++ +++ G++ + GT ++APEVL + A D WS+G + +
Sbjct: 159 MISDFGLSK----MEDPGSV---LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYIL 211
Query: 166 ATGRPPWGDK-ISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
G PP+ D+ + +LK + P++ DF+ +E+ PEKR++ E+
Sbjct: 212 LCGYPPFYDENDAKLFEQILKAEYEFDSPYW-DDISDSAKDFIRHLMEKDPEKRFTCEQA 270
Query: 225 LNHTFISGN 233
L H +I+G+
Sbjct: 271 LQHPWIAGD 279
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 118/249 (47%), Gaps = 25/249 (10%)
Query: 2 NKGTGALFVVKSAESEA--GVQ-ALRNEAEIRQSLNSPNIGRNGEKT-----VNIFMEYM 53
+K T L +K EA G + ++ NE + + PNI + + + M+ +
Sbjct: 39 DKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLV 98
Query: 54 AGGSLLD-VAEK-FGGTLDAGVI---RLYTKEILHGNGILHCDLKCNNVL---LGSHGDV 105
+GG L D + EK F DA + L + LH GI+H DLK N+L L +
Sbjct: 99 SGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKI 158
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
+ D G ++ +++ G++ + GT ++APEVL + A D WS+G + +
Sbjct: 159 MISDFGLSK----MEDPGSV---LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYIL 211
Query: 166 ATGRPPWGDK-ISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
G PP+ D+ + +LK + P++ DF+ +E+ PEKR++ E+
Sbjct: 212 LCGYPPFYDENDAKLFEQILKAEYEFDSPYW-DDISDSAKDFIRHLMEKDPEKRFTCEQA 270
Query: 225 LNHTFISGN 233
L H +I+G+
Sbjct: 271 LQHPWIAGD 279
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 120/264 (45%), Gaps = 41/264 (15%)
Query: 2 NKGTG----ALFVVKS--AESEAGV--QALRNEAEIRQSLNSPNIGR-----NGEKTVNI 48
KGTG A F+ K + S GV + + E I + + PNI + V +
Sbjct: 26 QKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL 85
Query: 49 FMEYMAGGSLLD-VAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGS 101
+E ++GG L D +AEK T D + K+IL H I H DLK N++L
Sbjct: 86 ILELVSGGELFDFLAEKESLTEDEAT--QFLKQILDGVHYLHSKRIAHFDLKPENIMLLD 143
Query: 102 HG----DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWS 157
+KL D G A ++ GN +++I GT ++APE++ E L D+WS
Sbjct: 144 KNVPNPRIKLIDFGIAHKIE----AGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWS 196
Query: 158 LGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKV----LDFLAKCLER 213
+G + + +G P+ + TL I+ N F ++F DF+ + L +
Sbjct: 197 IGVITYILLSGASPFLGE--TKQETLTNISAVNYD--FDEEYFSNTSELAKDFIRRLLVK 252
Query: 214 KPEKRWSAEELLNHTFISGNAKKN 237
P++R + + L H++I ++N
Sbjct: 253 DPKRRMTIAQSLEHSWIKAIRRRN 276
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 108/226 (47%), Gaps = 22/226 (9%)
Query: 22 ALRNEAEIRQSLNSPNIGRNGEKT-----VNIFMEYMAGGSLLD-VAEK-FGGTLDAGVI 74
++ NE + + PNI + + + M+ ++GG L D + EK F DA +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 75 ---RLYTKEILHGNGILHCDLKCNNVL---LGSHGDVKLPDLGCARRVNDLKNNGNLKQS 128
L + LH GI+H DLK N+L L + + D G ++ +++ G++
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK----MEDPGSV--- 174
Query: 129 WQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDK-ISNAAATLLKIA 187
+ GT ++APEVL + A D WS+G + + G PP+ D+ + +LK
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE 234
Query: 188 CSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
+ P++ DF+ +E+ PEKR++ E+ L H +I+G+
Sbjct: 235 YEFDSPYW-DDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD 279
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 111/229 (48%), Gaps = 21/229 (9%)
Query: 13 SAESEAGVQALRNEAEIRQSLNSPNI----GRNGEKTVNIFMEYMAGGSL---LDVAE-K 64
+A + +QA +NE + + NI G + + + I ++ G SL L +E K
Sbjct: 45 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETK 104
Query: 65 FGGTLDAGVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
F + R + + LH I+H DLK NN+ L VK+ D G A +K+
Sbjct: 105 FEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA----TVKSR 160
Query: 123 GNLKQSWQSIGGTQLWMAPEVLRNEG---LDFATDIWSLGCMVIEMATGRPPWGDKISNA 179
+ ++ + G+ LWMAPEV+R + F +D+++ G ++ E+ TG+ P+ + I+N
Sbjct: 161 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN-INNR 219
Query: 180 AATLLKIACSNEKPHFP---TQFFKKVLDFLAKCLERKPEKRWSAEELL 225
+ + + P + K++ +A+CL++K ++R S +L
Sbjct: 220 DQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 268
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 27/227 (11%)
Query: 21 QALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLD--VAEKFGGTLDAG- 72
Q L EA I + L PNI R + E + + + GG L + VA ++ DA
Sbjct: 75 QKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH 134
Query: 73 VIRLYTKEI--LHGNGILHCDLKCNNVLLGSH---GDVKLPDLGCARRVNDLKNNGNLKQ 127
I + + +H + I+H DLK N+LL S VKL D G A V +Q
Sbjct: 135 CIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ------GEQQ 188
Query: 128 SWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIA 187
+W GT +++PEVLR + DIW+ G ++ + G PP+ D+ + +K
Sbjct: 189 AWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAG 248
Query: 188 CSNEKPHFPTQFFKKVL----DFLAKCLERKPEKRWSAEELLNHTFI 230
+ FP+ + V + + + L P KR +A++ L H ++
Sbjct: 249 AYD----FPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWV 291
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 81/187 (43%), Gaps = 18/187 (9%)
Query: 43 EKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNN 96
E + +EY+ GG L+ ++ L R Y+ EI LH GI++ DLK +N
Sbjct: 125 ESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDN 183
Query: 97 VLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIW 156
VLL S G +KL D G K + + GT ++APE+LR E F+ D W
Sbjct: 184 VLLDSEGHIKLTDYGMC------KEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWW 237
Query: 157 SLGCMVIEMATGRPPW-----GDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCL 211
+LG ++ EM GR P+ D L ++ P K L L
Sbjct: 238 ALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFL 297
Query: 212 ERKPEKR 218
+ P++R
Sbjct: 298 NKDPKER 304
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 117/264 (44%), Gaps = 41/264 (15%)
Query: 2 NKGTGALFVVKSAE------SEAGV--QALRNEAEIRQSLNSPNIGR-----NGEKTVNI 48
KGTG + K + S GV + + E I + + PNI + V +
Sbjct: 47 QKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL 106
Query: 49 FMEYMAGGSLLD-VAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGS 101
+E ++GG L D +AEK T D + K+IL H I H DLK N++L
Sbjct: 107 ILELVSGGELFDFLAEKESLTEDEAT--QFLKQILDGVHYLHSKRIAHFDLKPENIMLLD 164
Query: 102 HG----DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWS 157
+KL D G A ++ GN +++I GT ++APE++ E L D+WS
Sbjct: 165 KNVPNPRIKLIDFGIAHKIE----AGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWS 217
Query: 158 LGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKV----LDFLAKCLER 213
+G + + +G P+ + TL I+ N F ++F DF+ + L +
Sbjct: 218 IGVITYILLSGASPFLGE--TKQETLTNISAVNYD--FDEEYFSNTSELAKDFIRRLLVK 273
Query: 214 KPEKRWSAEELLNHTFISGNAKKN 237
P++R + L H++I ++N
Sbjct: 274 DPKRRMXIAQSLEHSWIKAIRRRN 297
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 98/224 (43%), Gaps = 27/224 (12%)
Query: 24 RNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYT 78
+ E +I +N P + + E + + ++++ GG L K + V + Y
Sbjct: 78 KMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV-KFYL 136
Query: 79 KEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSI 132
E+ LH GI++ DLK N+LL G +KL D G ++ D + K+++ S
Sbjct: 137 AELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAID-----HEKKAY-SF 190
Query: 133 GGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEK 192
GT +MAPEV+ +G + D WS G ++ EM TG P+ K TL+ A K
Sbjct: 191 CGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKA----K 246
Query: 193 PHFPTQFFKKVLDFLAKCLERKPEKRW-----SAEELLNHTFIS 231
P + L +R P R AEE+ H F S
Sbjct: 247 LGMPQFLSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHVFYS 290
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 74/152 (48%), Gaps = 18/152 (11%)
Query: 76 LYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSW 129
YT +I LH I++ DLK NVLL G+V++ DLG A + G K
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK----AGQTKT-- 346
Query: 130 QSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPW---GDKISNAAATLLKI 186
+ GT +MAPE+L E DF+ D ++LG + EM R P+ G+K+ N LK
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE---LKQ 403
Query: 187 ACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
+ +P +F DF L++ PEKR
Sbjct: 404 RVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 74/152 (48%), Gaps = 18/152 (11%)
Query: 76 LYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSW 129
YT +I LH I++ DLK NVLL G+V++ DLG A + G K
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK----AGQTKT-- 346
Query: 130 QSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPW---GDKISNAAATLLKI 186
+ GT +MAPE+L E DF+ D ++LG + EM R P+ G+K+ N LK
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE---LKQ 403
Query: 187 ACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
+ +P +F DF L++ PEKR
Sbjct: 404 RVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 74/152 (48%), Gaps = 18/152 (11%)
Query: 76 LYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSW 129
YT +I LH I++ DLK NVLL G+V++ DLG A + G K
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK----AGQTKT-- 346
Query: 130 QSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPW---GDKISNAAATLLKI 186
+ GT +MAPE+L E DF+ D ++LG + EM R P+ G+K+ N LK
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE---LKQ 403
Query: 187 ACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
+ +P +F DF L++ PEKR
Sbjct: 404 RVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 21/229 (9%)
Query: 13 SAESEAGVQALRNEAEIRQSLNSPNI----GRNGEKTVNIFMEYMAGGSL---LDVAE-K 64
+A + +QA +NE + + NI G + + + I ++ G SL L +E K
Sbjct: 57 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETK 116
Query: 65 FGGTLDAGVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
F + R + + LH I+H DLK NN+ L VK+ D G A K+
Sbjct: 117 FEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATE----KSR 172
Query: 123 GNLKQSWQSIGGTQLWMAPEVLRNEG---LDFATDIWSLGCMVIEMATGRPPWGDKISNA 179
+ ++ + G+ LWMAPEV+R + F +D+++ G ++ E+ TG+ P+ + I+N
Sbjct: 173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN-INNR 231
Query: 180 AATLLKIACSNEKPHFP---TQFFKKVLDFLAKCLERKPEKRWSAEELL 225
+ + + P + K++ +A+CL++K ++R S +L
Sbjct: 232 DQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 280
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 67/136 (49%), Gaps = 13/136 (9%)
Query: 43 EKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNN 96
E + +EY+ GG L+ ++ L R Y+ EI LH GI++ DLK +N
Sbjct: 93 ESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDN 151
Query: 97 VLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIW 156
VLL S G +KL D G K + GT ++APE+LR E F+ D W
Sbjct: 152 VLLDSEGHIKLTDYGMC------KEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWW 205
Query: 157 SLGCMVIEMATGRPPW 172
+LG ++ EM GR P+
Sbjct: 206 ALGVLMFEMMAGRSPF 221
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 74/152 (48%), Gaps = 18/152 (11%)
Query: 76 LYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSW 129
YT +I LH I++ DLK NVLL G+V++ DLG A + G K
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK----AGQTKT-- 346
Query: 130 QSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPW---GDKISNAAATLLKI 186
+ GT +MAPE+L E DF+ D ++LG + EM R P+ G+K+ N LK
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE---LKQ 403
Query: 187 ACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
+ +P +F DF L++ PEKR
Sbjct: 404 RVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 67/136 (49%), Gaps = 13/136 (9%)
Query: 43 EKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNN 96
E + +EY+ GG L+ ++ L R Y+ EI LH GI++ DLK +N
Sbjct: 78 ESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDN 136
Query: 97 VLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIW 156
VLL S G +KL D G K + GT ++APE+LR E F+ D W
Sbjct: 137 VLLDSEGHIKLTDYGMC------KEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWW 190
Query: 157 SLGCMVIEMATGRPPW 172
+LG ++ EM GR P+
Sbjct: 191 ALGVLMFEMMAGRSPF 206
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 24/207 (11%)
Query: 44 KTVNIFMEYMAGGSLLD--VAEKFGGTLDAGVIRLY---TKEILHGNGILHCDLKCNNVL 98
K V + E M GG LLD + +KF +A + T E LH G++H DLK +N+L
Sbjct: 94 KHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNIL 153
Query: 99 L----GSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATD 154
G+ +++ D G A+++ NG L + ++APEVL+ +G D D
Sbjct: 154 YVDESGNPECLRICDFGFAKQLR--AENGLLMTPCYTAN----FVAPEVLKRQGYDEGCD 207
Query: 155 IWSLGCMVIEMATGRPPWGDKISNAAATLL------KIACSNEKPHFPTQFFKKVLDFLA 208
IWSLG ++ M G P+ + S+ +L K S + ++ K D ++
Sbjct: 208 IWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAK---DLVS 264
Query: 209 KCLERKPEKRWSAEELLNHTFISGNAK 235
K L P +R +A+++L H +++ K
Sbjct: 265 KMLHVDPHQRLTAKQVLQHPWVTQKDK 291
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 90/188 (47%), Gaps = 25/188 (13%)
Query: 61 VAEKFGGTLDAGVIRLYTKEILHGN-GILHCDLKCNNVLLGSHGDVKLPDLGCA-RRVND 118
+ E G + +++ E LH ++H D+K +NVL+ + G VK+ D G + V+D
Sbjct: 106 IPEDILGKIAVSIVK--ALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD 163
Query: 119 LKNNGNLKQSWQSIGGTQLWMAPEVLRNE----GLDFATDIWSLGCMVIEMATGRPP--- 171
+ + + G + +MAPE + E G +DIWSLG +IE+A R P
Sbjct: 164 VAKDID--------AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 215
Query: 172 WGDKISNAAATLLKIACSNEKPHFPT-QFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
WG LK P P +F + +DF ++CL++ ++R + EL+ H F
Sbjct: 216 WGTPFQQ-----LKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 270
Query: 231 SGNAKKNS 238
+ + K +
Sbjct: 271 TLHESKGT 278
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 115/279 (41%), Gaps = 55/279 (19%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 26 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 85
Query: 53 MAGGSLLDVAEKFGGTLDAGV----IRLYTKEIL------HGNGILHCDLKCNNVLLGSH 102
++ +D+ + + G+ I+ Y ++L H + +LH DLK N+L+ +
Sbjct: 86 LS----MDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE 141
Query: 103 GDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCM 161
G +KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 142 GAIKLADFGLARAF------GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 195
Query: 162 VIEMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 196 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 255
Query: 205 --------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 256 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 97/224 (43%), Gaps = 27/224 (12%)
Query: 24 RNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYT 78
+ E +I +N P I + E + + ++++ GG L K + V + Y
Sbjct: 75 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV-KFYL 133
Query: 79 KEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSI 132
E+ LH GI++ DLK N+LL G +KL D G ++ D + S
Sbjct: 134 AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA------YSF 187
Query: 133 GGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEK 192
GT +MAPEV+ G + D WS G ++ EM TG P+ K T++ +
Sbjct: 188 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI-LKAKLGM 246
Query: 193 PHFPTQFFKKVLDFLAKCLERKPEKRWSA-----EELLNHTFIS 231
P F + + +L L K R P R A EE+ H+F S
Sbjct: 247 PQFLSPEAQSLLRMLFK---RNPANRLGAGPDGVEEIKRHSFFS 287
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 111/237 (46%), Gaps = 29/237 (12%)
Query: 12 KSAESEAGVQALRNEAEIRQSLNSPNIGRNGE----KT-VNIFMEYMAGGSLLD-VAEKF 65
KS+ + + E I + + PN+ E KT V + +E +AGG L D +AEK
Sbjct: 50 KSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE 109
Query: 66 GGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHG----DVKLPDLGCARR 115
T + + K+IL H I H DLK N++L +K+ D G A +
Sbjct: 110 SLTEEEAT--EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 116 VNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPW-GD 174
++ GN +++I GT ++APE++ E L D+WS+G + + +G P+ GD
Sbjct: 168 ID----FGN---EFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 175 KISNAAATLLKIACSNEKPHFP-TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
A + + E +F T K DF+ + L + P+KR + ++ L H +I
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAK--DFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 109/229 (47%), Gaps = 21/229 (9%)
Query: 13 SAESEAGVQALRNEAEIRQSLNSPNI----GRNGEKTVNIFMEYMAGGSL---LDVAE-K 64
+A + +QA +NE + + NI G + + I ++ G SL L +E K
Sbjct: 57 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETK 116
Query: 65 FGGTLDAGVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
F + R + + LH I+H DLK NN+ L VK+ D G A K+
Sbjct: 117 FEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATE----KSR 172
Query: 123 GNLKQSWQSIGGTQLWMAPEVLRNEG---LDFATDIWSLGCMVIEMATGRPPWGDKISNA 179
+ ++ + G+ LWMAPEV+R + F +D+++ G ++ E+ TG+ P+ + I+N
Sbjct: 173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN-INNR 231
Query: 180 AATLLKIACSNEKPHFP---TQFFKKVLDFLAKCLERKPEKRWSAEELL 225
+ + + P + K++ +A+CL++K ++R S +L
Sbjct: 232 DQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 280
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 24/207 (11%)
Query: 44 KTVNIFMEYMAGGSLLD--VAEKFGGTLDAGVIRLY---TKEILHGNGILHCDLKCNNVL 98
K V + E M GG LLD + +KF +A + T E LH G++H DLK +N+L
Sbjct: 94 KHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNIL 153
Query: 99 L----GSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATD 154
G+ +++ D G A+++ NG L T ++APEVL+ +G D D
Sbjct: 154 YVDESGNPECLRICDFGFAKQLR--AENGLLMTPCY----TANFVAPEVLKRQGYDEGCD 207
Query: 155 IWSLGCMVIEMATGRPPWGDKISNAAATLL------KIACSNEKPHFPTQFFKKVLDFLA 208
IWSLG ++ M G P+ + S+ +L K S + ++ K D ++
Sbjct: 208 IWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAK---DLVS 264
Query: 209 KCLERKPEKRWSAEELLNHTFISGNAK 235
K L P +R +A+++L H +++ K
Sbjct: 265 KMLHVDPHQRLTAKQVLQHPWVTQKDK 291
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 115/279 (41%), Gaps = 55/279 (19%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 27 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 86
Query: 53 MAGGSLLDVAEKFGGTLDAGV----IRLYTKEIL------HGNGILHCDLKCNNVLLGSH 102
++ +D+ + + G+ I+ Y ++L H + +LH DLK N+L+ +
Sbjct: 87 LS----MDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE 142
Query: 103 GDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCM 161
G +KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 143 GAIKLADFGLARAF------GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 196
Query: 162 VIEMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 197 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 256
Query: 205 --------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 257 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 27/224 (12%)
Query: 24 RNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYT 78
+ E +I +N P I + E + + ++++ GG L K + V + Y
Sbjct: 74 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV-KFYL 132
Query: 79 KEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSI 132
E+ LH GI++ DLK N+LL G +KL D G ++ D + K+++ S
Sbjct: 133 AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID-----HEKKAY-SF 186
Query: 133 GGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEK 192
GT +MAPEV+ G + D WS G ++ EM TG P+ K T++ +
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI-LKAKLGM 245
Query: 193 PHFPTQFFKKVLDFLAKCLERKPEKRWSA-----EELLNHTFIS 231
P F + + +L L K R P R A EE+ H+F S
Sbjct: 246 PQFLSPEAQSLLRMLFK---RNPANRLGAGPDGVEEIKRHSFFS 286
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 67/136 (49%), Gaps = 13/136 (9%)
Query: 43 EKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNN 96
E + +EY+ GG L+ ++ L R Y+ EI LH GI++ DLK +N
Sbjct: 82 ESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDN 140
Query: 97 VLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIW 156
VLL S G +KL D G K + GT ++APE+LR E F+ D W
Sbjct: 141 VLLDSEGHIKLTDYGMC------KEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWW 194
Query: 157 SLGCMVIEMATGRPPW 172
+LG ++ EM GR P+
Sbjct: 195 ALGVLMFEMMAGRSPF 210
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 27/224 (12%)
Query: 24 RNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYT 78
+ E +I +N P I + E + + ++++ GG L K + V + Y
Sbjct: 74 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV-KFYL 132
Query: 79 KEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSI 132
E+ LH GI++ DLK N+LL G +KL D G ++ D + K+++ S
Sbjct: 133 AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID-----HEKKAY-SF 186
Query: 133 GGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEK 192
GT +MAPEV+ G + D WS G ++ EM TG P+ K T++ +
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI-LKAKLGM 245
Query: 193 PHFPTQFFKKVLDFLAKCLERKPEKRWSA-----EELLNHTFIS 231
P F + + +L L K R P R A EE+ H+F S
Sbjct: 246 PQFLSPEAQSLLRMLFK---RNPANRLGAGPDGVEEIKRHSFFS 286
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 102/225 (45%), Gaps = 21/225 (9%)
Query: 24 RNEAEIRQSLNSPNIGRNGEK-----TVNIFMEYMAGGSLLDVAEKFGGTL--DAGVIRL 76
R E + ++ PNI + E ++ I M+Y GG L G L + ++
Sbjct: 71 RREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW 130
Query: 77 YTKEIL-----HGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQS 131
+ + L H ILH D+K N+ L G V+L D G AR +N + + ++
Sbjct: 131 FVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN------STVELARA 184
Query: 132 IGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNE 191
GT +++PE+ N+ + +DIW+LGC++ E+ T + + + + +LKI S
Sbjct: 185 CIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAF--EAGSMKNLVLKI-ISGS 241
Query: 192 KPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKK 236
P + + +++ +R P R S +L FI+ +K
Sbjct: 242 FPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEK 286
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 21/182 (11%)
Query: 2 NKGTGALFVVKSAESEAGVQ---ALRNEAEIRQSLNSPNIGR-------NGEKTVNIFME 51
N GTG + VK+ +++ G Q + E +I ++L +I + GEK++ + ME
Sbjct: 39 NDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVME 98
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDV 105
Y+ GSL D + ++ + L+ ++I LH +H +L NVLL + V
Sbjct: 99 YVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLV 156
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
K+ D G A+ V + +++ S W APE L+ +A+D+WS G + E+
Sbjct: 157 KIGDFGLAKAVPEGHEYYRVREDGDS---PVFWYAPECLKEYKFYYASDVWSFGVTLYEL 213
Query: 166 AT 167
T
Sbjct: 214 LT 215
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 114/277 (41%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 27 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 86
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ + +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 87 LHQDLKTFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 144
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 145 IKLADFGLARAF------GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 198
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 199 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 258
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 259 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 111/237 (46%), Gaps = 29/237 (12%)
Query: 12 KSAESEAGVQALRNEAEIRQSLNSPNIGRNGE----KT-VNIFMEYMAGGSLLD-VAEKF 65
KS+ + + E I + + PN+ E KT V + +E +AGG L D +AEK
Sbjct: 50 KSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE 109
Query: 66 GGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHG----DVKLPDLGCARR 115
T + + K+IL H I H DLK N++L +K+ D G A +
Sbjct: 110 SLTEEEAT--EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 116 VNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPW-GD 174
++ GN +++I GT ++APE++ E L D+WS+G + + +G P+ GD
Sbjct: 168 ID----FGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 175 KISNAAATLLKIACSNEKPHFP-TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
A + + E +F T K DF+ + L + P+KR + ++ L H +I
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAK--DFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H +GI+H DLK N L+ G +KL D G A ++ + ++ + Q GT +M P
Sbjct: 171 IHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQ--PDTTSVVKDSQV--GTVNYMPP 225
Query: 142 EVLRN-----------EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN 190
E +++ + +D+WSLGC++ M G+ P+ +I N + L I N
Sbjct: 226 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPN 284
Query: 191 EKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
+ FP K + D L CL+R P++R S ELL H ++
Sbjct: 285 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 111/237 (46%), Gaps = 29/237 (12%)
Query: 12 KSAESEAGVQALRNEAEIRQSLNSPNIGRNGE----KT-VNIFMEYMAGGSLLD-VAEKF 65
KS+ + + E I + + PN+ E KT V + +E +AGG L D +AEK
Sbjct: 50 KSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE 109
Query: 66 GGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHG----DVKLPDLGCARR 115
T + + K+IL H I H DLK N++L +K+ D G A +
Sbjct: 110 SLTEEEAT--EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 116 VNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPW-GD 174
++ GN +++I GT ++APE++ E L D+WS+G + + +G P+ GD
Sbjct: 168 ID----FGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 175 KISNAAATLLKIACSNEKPHFP-TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
A + + E +F T K DF+ + L + P+KR + ++ L H +I
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAK--DFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 101/231 (43%), Gaps = 27/231 (11%)
Query: 21 QALRNEAEIRQSLNSPNI----GRNGEKTVNIFMEYMAGGSL---LDVAE-KFGGTLDAG 72
QA RNE + + NI G + + I ++ G SL L V E KF
Sbjct: 77 QAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLID 136
Query: 73 VIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQ 130
+ R + + LH I+H D+K NN+ L VK+ D G A +K+ + Q +
Sbjct: 137 IARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLA----TVKSRWSGSQQVE 192
Query: 131 SIGGTQLWMAPEVLR---NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIA 187
G+ LWMAPEV+R N F +D++S G ++ E+ TG P+ I+N + +
Sbjct: 193 QPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYS-HINNRDQIIFMVG 251
Query: 188 CSNEKPHF-------PTQFFKKVLDFLAKCLERKP--EKRWSAEELLNHTF 229
P P + V D + K E +P + S+ ELL H+
Sbjct: 252 RGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 111/237 (46%), Gaps = 29/237 (12%)
Query: 12 KSAESEAGVQALRNEAEIRQSLNSPNIGRNGE----KT-VNIFMEYMAGGSLLD-VAEKF 65
KS+ + + E I + + PN+ E KT V + +E +AGG L D +AEK
Sbjct: 50 KSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE 109
Query: 66 GGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHG----DVKLPDLGCARR 115
T + + K+IL H I H DLK N++L +K+ D G A +
Sbjct: 110 SLTEEEAT--EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 116 VNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPW-GD 174
++ GN +++I GT ++APE++ E L D+WS+G + + +G P+ GD
Sbjct: 168 ID----FGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 175 KISNAAATLLKIACSNEKPHFP-TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
A + + E +F T K DF+ + L + P+KR + ++ L H +I
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAK--DFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 111/237 (46%), Gaps = 29/237 (12%)
Query: 12 KSAESEAGVQALRNEAEIRQSLNSPNIGRNGE----KT-VNIFMEYMAGGSLLD-VAEKF 65
KS+ + + E I + + PN+ E KT V + +E +AGG L D +AEK
Sbjct: 50 KSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE 109
Query: 66 GGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHG----DVKLPDLGCARR 115
T + + K+IL H I H DLK N++L +K+ D G A +
Sbjct: 110 SLTEEEAT--EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 116 VNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPW-GD 174
++ GN +++I GT ++APE++ E L D+WS+G + + +G P+ GD
Sbjct: 168 ID----FGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 175 KISNAAATLLKIACSNEKPHFP-TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
A + + E +F T K DF+ + L + P+KR + ++ L H +I
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAK--DFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 28/230 (12%)
Query: 21 QALRNEAEIRQSLNSPNI-----GRNGEKTVNIFMEYMAGGSLLD--VAEKFGGT-LDAG 72
+ ++NE + L+ N+ + + + MEY+ GG L D + E + T LD
Sbjct: 131 EEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDT- 189
Query: 73 VIRLYTKEI------LHGNGILHCDLKCNNVLLGSHG--DVKLPDLGCARRVNDLKNNGN 124
L+ K+I +H ILH DLK N+L + +K+ D G ARR K
Sbjct: 190 --ILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARR---YKPREK 244
Query: 125 LKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPW-GDKISNAAATL 183
LK ++ GT ++APEV+ + + F TD+WS+G + + +G P+ GD + +
Sbjct: 245 LKVNF----GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNI 300
Query: 184 LKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233
L E F ++ +F++K L ++ R SA E L H ++S +
Sbjct: 301 LACRWDLEDEEF-QDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 86/177 (48%), Gaps = 23/177 (12%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H +GI+H DLK N L+ G +KL D G A ++ + ++ + Q GT +M P
Sbjct: 143 IHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQ--PDTTSVVKDSQV--GTVNYMPP 197
Query: 142 EVLRNEG-----------LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN 190
E +++ + +D+WSLGC++ M G+ P+ +I N + L I N
Sbjct: 198 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPN 256
Query: 191 EKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFIS------GNAKKNSTEE 241
+ FP K + D L CL+R P++R S ELL H ++ K +TEE
Sbjct: 257 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEE 313
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 21/182 (11%)
Query: 2 NKGTGALFVVKSAESEAGVQ---ALRNEAEIRQSLNSPNIGR-------NGEKTVNIFME 51
N GTG + VK+ +++ G Q + E +I ++L +I + GEK++ + ME
Sbjct: 39 NDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVME 98
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDV 105
Y+ GSL D + ++ + L+ ++I LH +H +L NVLL + V
Sbjct: 99 YVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLV 156
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
K+ D G A+ V + +++ S W APE L+ +A+D+WS G + E+
Sbjct: 157 KIGDFGLAKAVPEGHEYYRVREDGDS---PVFWYAPECLKEYKFYYASDVWSFGVTLYEL 213
Query: 166 AT 167
T
Sbjct: 214 LT 215
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 86/177 (48%), Gaps = 23/177 (12%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H +GI+H DLK N L+ G +KL D G A ++ + ++ + Q GT +M P
Sbjct: 123 IHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQ--PDTTSVVKDSQV--GTVNYMPP 177
Query: 142 EVLRNEG-----------LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN 190
E +++ + +D+WSLGC++ M G+ P+ +I N + L I N
Sbjct: 178 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPN 236
Query: 191 EKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFIS------GNAKKNSTEE 241
+ FP K + D L CL+R P++R S ELL H ++ K +TEE
Sbjct: 237 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEE 293
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 111/237 (46%), Gaps = 29/237 (12%)
Query: 12 KSAESEAGVQALRNEAEIRQSLNSPNIGRNGE----KT-VNIFMEYMAGGSLLD-VAEKF 65
KS+ + + E I + + PN+ E KT V + +E +AGG L D +AEK
Sbjct: 50 KSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE 109
Query: 66 GGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHG----DVKLPDLGCARR 115
T + + K+IL H I H DLK N++L +K+ D G A +
Sbjct: 110 SLTEEEAT--EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 116 VNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPW-GD 174
++ GN +++I GT ++APE++ E L D+WS+G + + +G P+ GD
Sbjct: 168 ID----FGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 175 KISNAAATLLKIACSNEKPHFP-TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
A + + E +F T K DF+ + L + P+KR + ++ L H +I
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAK--DFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 111/237 (46%), Gaps = 29/237 (12%)
Query: 12 KSAESEAGVQALRNEAEIRQSLNSPNIGRNGE----KT-VNIFMEYMAGGSLLD-VAEKF 65
KS+ + + E I + + PN+ E KT V + +E +AGG L D +AEK
Sbjct: 50 KSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE 109
Query: 66 GGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHG----DVKLPDLGCARR 115
T + + K+IL H I H DLK N++L +K+ D G A +
Sbjct: 110 SLTEEEAT--EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 116 VNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPW-GD 174
++ GN +++I GT ++APE++ E L D+WS+G + + +G P+ GD
Sbjct: 168 ID----FGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 175 KISNAAATLLKIACSNEKPHFP-TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
A + + E +F T K DF+ + L + P+KR + ++ L H +I
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAK--DFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 114/277 (41%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 25 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 84
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
++ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 85 LSMDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGA 142
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 143 IKLADFGLARAF------GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 196
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 197 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 256
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 257 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 114/277 (41%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 27 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 86
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
++ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 87 LSMDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGA 144
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 145 IKLADFGLARAF------GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 198
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 199 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 258
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 259 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H +GI+H DLK N L+ G +KL D G A ++ + ++ + Q GT +M P
Sbjct: 171 IHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQ--PDTTSVVKDSQV--GTVNYMPP 225
Query: 142 EVLRN-----------EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN 190
E +++ + +D+WSLGC++ M G+ P+ +I N + L I N
Sbjct: 226 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPN 284
Query: 191 EKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
+ FP K + D L CL+R P++R S ELL H ++
Sbjct: 285 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 111/237 (46%), Gaps = 29/237 (12%)
Query: 12 KSAESEAGVQALRNEAEIRQSLNSPNIGRNGE----KT-VNIFMEYMAGGSLLD-VAEKF 65
KS+ + + E I + + PN+ E KT V + +E +AGG L D +AEK
Sbjct: 50 KSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE 109
Query: 66 GGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHG----DVKLPDLGCARR 115
T + + K+IL H I H DLK N++L +K+ D G A +
Sbjct: 110 SLTEEEAT--EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 116 VNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPW-GD 174
++ GN +++I GT ++APE++ E L D+WS+G + + +G P+ GD
Sbjct: 168 ID----FGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 175 KISNAAATLLKIACSNEKPHFP-TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
A + + E +F T K DF+ + L + P+KR + ++ L H +I
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAK--DFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 111/237 (46%), Gaps = 29/237 (12%)
Query: 12 KSAESEAGVQALRNEAEIRQSLNSPNIGRNGE----KT-VNIFMEYMAGGSLLD-VAEKF 65
KS+ + + E I + + PN+ E KT V + +E +AGG L D +AEK
Sbjct: 49 KSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE 108
Query: 66 GGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHG----DVKLPDLGCARR 115
T + + K+IL H I H DLK N++L +K+ D G A +
Sbjct: 109 SLTEEEAT--EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 166
Query: 116 VNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPW-GD 174
++ GN +++I GT ++APE++ E L D+WS+G + + +G P+ GD
Sbjct: 167 ID----FGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 219
Query: 175 KISNAAATLLKIACSNEKPHFP-TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
A + + E +F T K DF+ + L + P+KR + ++ L H +I
Sbjct: 220 TKQETLANVSAVNYEFEDEYFSNTSALAK--DFIRRLLVKDPKKRMTIQDSLQHPWI 274
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H +GI+H DLK N L+ G +KL D G A ++ + ++ + Q GT +M P
Sbjct: 124 IHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQ--PDTTSVVKDSQV--GTVNYMPP 178
Query: 142 EVLRNEG-----------LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN 190
E +++ + +D+WSLGC++ M G+ P+ +I N + L I N
Sbjct: 179 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPN 237
Query: 191 EKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
+ FP K + D L CL+R P++R S ELL H ++
Sbjct: 238 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 277
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 86/177 (48%), Gaps = 23/177 (12%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H +GI+H DLK N L+ G +KL D G A ++ + ++ + Q GT +M P
Sbjct: 127 IHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQ--PDTTSVVKDSQV--GTVNYMPP 181
Query: 142 EVLRNEG-----------LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN 190
E +++ + +D+WSLGC++ M G+ P+ +I N + L I N
Sbjct: 182 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPN 240
Query: 191 EKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFIS------GNAKKNSTEE 241
+ FP K + D L CL+R P++R S ELL H ++ K +TEE
Sbjct: 241 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEE 297
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 111/237 (46%), Gaps = 29/237 (12%)
Query: 12 KSAESEAGVQALRNEAEIRQSLNSPNIGRNGE----KT-VNIFMEYMAGGSLLD-VAEKF 65
KS+ + + E I + + PN+ E KT V + +E +AGG L D +AEK
Sbjct: 50 KSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE 109
Query: 66 GGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHG----DVKLPDLGCARR 115
T + + K+IL H I H DLK N++L +K+ D G A +
Sbjct: 110 SLTEEEAT--EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 116 VNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPW-GD 174
++ GN +++I GT ++APE++ E L D+WS+G + + +G P+ GD
Sbjct: 168 ID----FGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 175 KISNAAATLLKIACSNEKPHFP-TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
A + + E +F T K DF+ + L + P+KR + ++ L H +I
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAK--DFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 104/222 (46%), Gaps = 21/222 (9%)
Query: 13 SAESEAGVQALRNEAEIRQSLNSPNI----GRNGEKTVNIFMEYMAGGSLLD----VAEK 64
+A + +QA +NE + + NI G + + + I ++ G SL + K
Sbjct: 43 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK 102
Query: 65 FGGTLDAGVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
F + R + + LH I+H DLK NN+ L VK+ D G A +K+
Sbjct: 103 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA----TVKSR 158
Query: 123 GNLKQSWQSIGGTQLWMAPEVLRNEG---LDFATDIWSLGCMVIEMATGRPPWGDKISNA 179
+ ++ + G+ LWMAPEV+R + F +D+++ G ++ E+ TG+ P+ + I+N
Sbjct: 159 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN-INNR 217
Query: 180 AATLLKIACSNEKPHFP---TQFFKKVLDFLAKCLERKPEKR 218
+ + P + K + +A+CL++K ++R
Sbjct: 218 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 259
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 104/222 (46%), Gaps = 21/222 (9%)
Query: 13 SAESEAGVQALRNEAEIRQSLNSPNI----GRNGEKTVNIFMEYMAGGSLLD----VAEK 64
+A + +QA +NE + + NI G + + + I ++ G SL + K
Sbjct: 68 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK 127
Query: 65 FGGTLDAGVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
F + R + + LH I+H DLK NN+ L VK+ D G A +K+
Sbjct: 128 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA----TVKSR 183
Query: 123 GNLKQSWQSIGGTQLWMAPEVLRNEG---LDFATDIWSLGCMVIEMATGRPPWGDKISNA 179
+ ++ + G+ LWMAPEV+R + F +D+++ G ++ E+ TG+ P+ + I+N
Sbjct: 184 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN-INNR 242
Query: 180 AATLLKIACSNEKPHFP---TQFFKKVLDFLAKCLERKPEKR 218
+ + P + K + +A+CL++K ++R
Sbjct: 243 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 284
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 111/237 (46%), Gaps = 29/237 (12%)
Query: 12 KSAESEAGVQALRNEAEIRQSLNSPNIGRNGE----KT-VNIFMEYMAGGSLLD-VAEKF 65
KS+ + + E I + + PN+ E KT V + +E +AGG L D +AEK
Sbjct: 50 KSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE 109
Query: 66 GGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHG----DVKLPDLGCARR 115
T + + K+IL H I H DLK N++L +K+ D G A +
Sbjct: 110 SLTEEEAT--EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 116 VNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPW-GD 174
++ GN +++I GT ++APE++ E L D+WS+G + + +G P+ GD
Sbjct: 168 ID----FGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 175 KISNAAATLLKIACSNEKPHFP-TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
A + + E +F T K DF+ + L + P+KR + ++ L H +I
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAK--DFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 113/277 (40%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 24 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 83
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 84 LHQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 141
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR-NEGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 142 IKLADFGLARAF------GVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFA 195
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 196 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 255
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 256 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 111/237 (46%), Gaps = 29/237 (12%)
Query: 12 KSAESEAGVQALRNEAEIRQSLNSPNIGRNGE----KT-VNIFMEYMAGGSLLD-VAEKF 65
KS+ + + E I + + PN+ E KT V + +E +AGG L D +AEK
Sbjct: 49 KSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE 108
Query: 66 GGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHG----DVKLPDLGCARR 115
T + + K+IL H I H DLK N++L +K+ D G A +
Sbjct: 109 SLTEEEAT--EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 166
Query: 116 VNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPW-GD 174
++ GN +++I GT ++APE++ E L D+WS+G + + +G P+ GD
Sbjct: 167 ID----FGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 219
Query: 175 KISNAAATLLKIACSNEKPHFP-TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
A + + E +F T K DF+ + L + P+KR + ++ L H +I
Sbjct: 220 TKQETLANVSAVNYEFEDEYFSNTSALAK--DFIRRLLVKDPKKRMTIQDSLQHPWI 274
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 104/222 (46%), Gaps = 21/222 (9%)
Query: 13 SAESEAGVQALRNEAEIRQSLNSPNI----GRNGEKTVNIFMEYMAGGSLLD----VAEK 64
+A + +QA +NE + + NI G + + + I ++ G SL + K
Sbjct: 46 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK 105
Query: 65 FGGTLDAGVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
F + R + + LH I+H DLK NN+ L VK+ D G A +K+
Sbjct: 106 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA----TVKSR 161
Query: 123 GNLKQSWQSIGGTQLWMAPEVLRNEG---LDFATDIWSLGCMVIEMATGRPPWGDKISNA 179
+ ++ + G+ LWMAPEV+R + F +D+++ G ++ E+ TG+ P+ + I+N
Sbjct: 162 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN-INNR 220
Query: 180 AATLLKIACSNEKPHFP---TQFFKKVLDFLAKCLERKPEKR 218
+ + P + K + +A+CL++K ++R
Sbjct: 221 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 262
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 104/222 (46%), Gaps = 21/222 (9%)
Query: 13 SAESEAGVQALRNEAEIRQSLNSPNI----GRNGEKTVNIFMEYMAGGSLLD----VAEK 64
+A + +QA +NE + + NI G + + + I ++ G SL + K
Sbjct: 69 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK 128
Query: 65 FGGTLDAGVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
F + R + + LH I+H DLK NN+ L VK+ D G A +K+
Sbjct: 129 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA----TVKSR 184
Query: 123 GNLKQSWQSIGGTQLWMAPEVLRNEG---LDFATDIWSLGCMVIEMATGRPPWGDKISNA 179
+ ++ + G+ LWMAPEV+R + F +D+++ G ++ E+ TG+ P+ + I+N
Sbjct: 185 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN-INNR 243
Query: 180 AATLLKIACSNEKPHFP---TQFFKKVLDFLAKCLERKPEKR 218
+ + P + K + +A+CL++K ++R
Sbjct: 244 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 285
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 113/277 (40%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 24 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 83
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 84 LHQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGA 141
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 142 IKLADFGLARAF------GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 195
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 196 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 255
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 256 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 104/222 (46%), Gaps = 21/222 (9%)
Query: 13 SAESEAGVQALRNEAEIRQSLNSPNI----GRNGEKTVNIFMEYMAGGSLLD----VAEK 64
+A + +QA +NE + + NI G + + + I ++ G SL + K
Sbjct: 41 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK 100
Query: 65 FGGTLDAGVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
F + R + + LH I+H DLK NN+ L VK+ D G A +K+
Sbjct: 101 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA----TVKSR 156
Query: 123 GNLKQSWQSIGGTQLWMAPEVLRNEG---LDFATDIWSLGCMVIEMATGRPPWGDKISNA 179
+ ++ + G+ LWMAPEV+R + F +D+++ G ++ E+ TG+ P+ + I+N
Sbjct: 157 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN-INNR 215
Query: 180 AATLLKIACSNEKPHFP---TQFFKKVLDFLAKCLERKPEKR 218
+ + P + K + +A+CL++K ++R
Sbjct: 216 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 257
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 113/277 (40%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 23 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 82
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 83 LHQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 140
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 141 IKLADFGLARAF------GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 194
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 195 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 254
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 255 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 113/277 (40%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 23 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 82
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 83 LHQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 140
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 141 IKLADFGLARAF------GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 194
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 195 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 254
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 255 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 109/237 (45%), Gaps = 29/237 (12%)
Query: 12 KSAESEAGVQALRNEAEIRQSLNSPNI-----GRNGEKTVNIFMEYMAGGSLLD-VAEKF 65
KS+ + + E I + + PN+ + V + +E +AGG L D +AEK
Sbjct: 50 KSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE 109
Query: 66 GGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHG----DVKLPDLGCARR 115
T + + K+IL H I H DLK N++L +K+ D G A +
Sbjct: 110 SLTEEEAT--EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 116 VNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPW-GD 174
++ GN +++I GT ++APE++ E L D+WS+G + + +G P+ GD
Sbjct: 168 ID----FGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 175 KISNAAATLLKIACSNEKPHFP-TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
A + + E +F T K DF+ + L + P+KR + ++ L H +I
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAK--DFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 116/259 (44%), Gaps = 41/259 (15%)
Query: 2 NKGTG----ALFVVKS--AESEAGV--QALRNEAEIRQSLNSPNIGR-----NGEKTVNI 48
KGTG A F+ K + S GV + + E I + + PNI + V +
Sbjct: 33 QKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL 92
Query: 49 FMEYMAGGSLLD-VAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGS 101
+E ++GG L D +AEK T D + K+IL H I H DLK N++L
Sbjct: 93 ILELVSGGELFDFLAEKESLTEDEAT--QFLKQILDGVHYLHSKRIAHFDLKPENIMLLD 150
Query: 102 HG----DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWS 157
+KL D G A ++ GN +++I GT ++APE++ E L D+WS
Sbjct: 151 KNVPNPRIKLIDFGIAHKIE----AGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWS 203
Query: 158 LGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKV----LDFLAKCLER 213
+G + + +G P+ + TL I+ N F ++F DF+ + L +
Sbjct: 204 IGVITYILLSGASPFLGE--TKQETLTNISAVNYD--FDEEYFSNTSELAKDFIRRLLVK 259
Query: 214 KPEKRWSAEELLNHTFISG 232
P++R + L H++I
Sbjct: 260 DPKRRMXIAQSLEHSWIKA 278
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 113/277 (40%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 28 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 87
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 88 LHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 145
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 146 IKLADFGLARAF------GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 199
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 200 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 259
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 260 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 296
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 113/277 (40%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 24 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 83
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 84 LHQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 141
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 142 IKLADFGLARAF------GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 195
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 196 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 255
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 256 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 113/277 (40%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 23 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 82
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 83 LHQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 140
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 141 IKLADFGLARAF------GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 194
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 195 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 254
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 255 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 113/277 (40%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 24 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 83
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 84 LHQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 141
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 142 IKLADFGLARAF------GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 195
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 196 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 255
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 256 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 113/277 (40%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 24 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 83
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 84 LHQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 141
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 142 IKLADFGLARAF------GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 195
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 196 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 255
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 256 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 113/277 (40%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 31 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 90
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 91 LHQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 148
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR-NEGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 149 IKLADFGLARAF------GVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFA 202
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 203 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 262
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 263 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 299
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 104/222 (46%), Gaps = 21/222 (9%)
Query: 13 SAESEAGVQALRNEAEIRQSLNSPNI----GRNGEKTVNIFMEYMAGGSLLD----VAEK 64
+A + +QA +NE + + NI G + + + I ++ G SL + K
Sbjct: 46 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK 105
Query: 65 FGGTLDAGVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
F + R + + LH I+H DLK NN+ L VK+ D G A +K+
Sbjct: 106 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA----TVKSR 161
Query: 123 GNLKQSWQSIGGTQLWMAPEVLRNEG---LDFATDIWSLGCMVIEMATGRPPWGDKISNA 179
+ ++ + G+ LWMAPEV+R + F +D+++ G ++ E+ TG+ P+ + I+N
Sbjct: 162 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN-INNR 220
Query: 180 AATLLKIACSNEKPHFP---TQFFKKVLDFLAKCLERKPEKR 218
+ + P + K + +A+CL++K ++R
Sbjct: 221 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 262
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 113/277 (40%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 26 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 85
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 86 LHQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 143
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 144 IKLADFGLARAF------GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 197
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 198 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 257
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 258 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 113/277 (40%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 27 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 86
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 87 LHQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 144
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 145 IKLADFGLARAF------GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 198
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 199 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 258
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 259 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 113/277 (40%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 26 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 85
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 86 LHQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 143
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 144 IKLADFGLARAF------GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 197
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 198 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 257
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 258 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 113/277 (40%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 24 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 83
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 84 LHQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 141
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 142 IKLADFGLARAF------GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 195
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 196 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 255
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 256 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 113/277 (40%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 31 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 90
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 91 LHQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 148
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 149 IKLADFGLARAF------GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 202
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 203 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 262
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 263 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 299
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 113/277 (40%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 23 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 82
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 83 LHQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 140
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 141 IKLADFGLARAF------GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 194
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 195 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 254
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 255 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 113/277 (40%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 25 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 84
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 85 LHQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 142
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 143 IKLADFGLARAF------GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 196
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 197 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 256
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 257 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 113/277 (40%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 25 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 84
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 85 LHQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 142
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 143 IKLADFGLARAF------GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 196
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 197 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 256
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 257 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 113/277 (40%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 24 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 83
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 84 LHQDLKDFMDASALTGIPL--PLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGA 141
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 142 IKLADFGLARAF------GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 195
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 196 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 255
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 256 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 113/277 (40%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 25 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 84
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 85 LHQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 142
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 143 IKLADFGLARAF------GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 196
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 197 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 256
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 257 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 21/182 (11%)
Query: 2 NKGTGALFVVKSAESEAGVQ---ALRNEAEIRQSLNSPNIGRN-------GEKTVNIFME 51
N GTG + VK+ +++AG Q + E +I ++L +I + G ++ + ME
Sbjct: 56 NDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVME 115
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDV 105
Y+ GSL D + ++ + L+ ++I LH +H DL NVLL + V
Sbjct: 116 YVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLV 173
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
K+ D G A+ V + +++ S W APE L+ +A+D+WS G + E+
Sbjct: 174 KIGDFGLAKAVPEGHEXYRVREDGDS---PVFWYAPECLKEYKFYYASDVWSFGVTLYEL 230
Query: 166 AT 167
T
Sbjct: 231 LT 232
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 113/277 (40%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 24 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 83
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 84 LHQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 141
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 142 IKLADFGLARAF------GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 195
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 196 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 255
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 256 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 113/277 (40%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 28 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 87
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 88 LHQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 145
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 146 IKLADFGLARAF------GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 199
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 200 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 259
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 260 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 296
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 113/277 (40%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 27 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 86
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 87 LHQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 144
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 145 IKLADFGLARAF------GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 198
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 199 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 258
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 259 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 114/277 (41%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 23 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEH 82
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ + +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 83 VHQDLKTFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 140
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 141 IKLADFGLARAF------GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 194
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 195 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 254
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 255 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 113/277 (40%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 25 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 84
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 85 LHQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGA 142
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 143 IKLADFGLARAF------GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 196
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 197 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 256
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 257 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 113/277 (40%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 26 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 85
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 86 LHQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGA 143
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 144 IKLADFGLARAF------GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 197
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 198 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 257
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 258 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 21/179 (11%)
Query: 61 VAEKFGGTLDAGVIR--LYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVND 118
+ E+ G + +++ Y KE +G++H D+K +N+LL G +KL D G + R+ D
Sbjct: 121 IPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177
Query: 119 LKNNGNLKQSWQSIGGTQLWMAPEVL-----RNEGLDFATDIWSLGCMVIEMATGRPPWG 173
K + G +MAPE + D D+WSLG ++E+ATG+ P+
Sbjct: 178 DK-------AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPY- 229
Query: 174 DKISNAAATLLKIACSNEKPHFPTQ--FFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
K +L E P P F F+ CL + KR +LL H+FI
Sbjct: 230 -KNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFI 287
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 18/182 (9%)
Query: 1 MNKGTGALFVVKSAE--SEAGVQALRNEAEIRQSLNSPNIGRN-------GEKTVNIFME 51
+ TG + VK + +E ++ E EI +SL NI + G + + + ME
Sbjct: 38 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 97
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDV 105
Y+ GSL D +K +D + YT +I G L H DL N+L+ + V
Sbjct: 98 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV 157
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
K+ D G + + K +K+ +S W APE L A+D+WS G ++ E+
Sbjct: 158 KIGDFGLTKVLPQDKEXXKVKEPGES---PIFWYAPESLTESKFSVASDVWSFGVVLYEL 214
Query: 166 AT 167
T
Sbjct: 215 FT 216
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 23/177 (12%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H +GI+H DLK N L+ G +KL D G A ++ + + + Q GT +M P
Sbjct: 143 IHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQ--PDXXXVVKDSQV--GTVNYMPP 197
Query: 142 EVLRNEG-----------LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN 190
E +++ + +D+WSLGC++ M G+ P+ +I N + L I N
Sbjct: 198 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPN 256
Query: 191 EKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFIS------GNAKKNSTEE 241
+ FP K + D L CL+R P++R S ELL H ++ K +TEE
Sbjct: 257 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEE 313
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 18/182 (9%)
Query: 1 MNKGTGALFVVKSAE--SEAGVQALRNEAEIRQSLNSPNIGRN-------GEKTVNIFME 51
+ TG + VK + +E ++ E EI +SL NI + G + + + ME
Sbjct: 33 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 92
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDV 105
Y+ GSL D +K +D + YT +I G L H DL N+L+ + V
Sbjct: 93 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV 152
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
K+ D G + + K +K+ +S W APE L A+D+WS G ++ E+
Sbjct: 153 KIGDFGLTKVLPQDKEXXKVKEPGES---PIFWYAPESLTESKFSVASDVWSFGVVLYEL 209
Query: 166 AT 167
T
Sbjct: 210 FT 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 18/182 (9%)
Query: 1 MNKGTGALFVVKSAE--SEAGVQALRNEAEIRQSLNSPNIGRN-------GEKTVNIFME 51
+ TG + VK + +E ++ E EI +SL NI + G + + + ME
Sbjct: 32 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 91
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDV 105
Y+ GSL D +K +D + YT +I G L H DL N+L+ + V
Sbjct: 92 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV 151
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
K+ D G + + K +K+ +S W APE L A+D+WS G ++ E+
Sbjct: 152 KIGDFGLTKVLPQDKEXXKVKEPGES---PIFWYAPESLTESKFSVASDVWSFGVVLYEL 208
Query: 166 AT 167
T
Sbjct: 209 FT 210
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 21/222 (9%)
Query: 13 SAESEAGVQALRNEAEIRQSLNSPNI----GRNGEKTVNIFMEYMAGGSLLD----VAEK 64
+A + +QA +NE + + NI G + + I ++ G SL + K
Sbjct: 41 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETK 100
Query: 65 FGGTLDAGVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
F + R + + LH I+H DLK NN+ L VK+ D G A +K+
Sbjct: 101 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA----TVKSR 156
Query: 123 GNLKQSWQSIGGTQLWMAPEVLRNEG---LDFATDIWSLGCMVIEMATGRPPWGDKISNA 179
+ ++ + G+ LWMAPEV+R + F +D+++ G ++ E+ TG+ P+ + I+N
Sbjct: 157 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN-INNR 215
Query: 180 AATLLKIACSNEKPHFP---TQFFKKVLDFLAKCLERKPEKR 218
+ + P + K + +A+CL++K ++R
Sbjct: 216 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 257
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 21/222 (9%)
Query: 13 SAESEAGVQALRNEAEIRQSLNSPNI----GRNGEKTVNIFMEYMAGGSLLD----VAEK 64
+A + +QA +NE + + NI G + + + I ++ G SL + K
Sbjct: 61 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK 120
Query: 65 FGGTLDAGVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
F + R + + LH I+H DLK NN+ L VK+ D G A K+
Sbjct: 121 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATE----KSR 176
Query: 123 GNLKQSWQSIGGTQLWMAPEVLRNEG---LDFATDIWSLGCMVIEMATGRPPWGDKISNA 179
+ ++ + G+ LWMAPEV+R + F +D+++ G ++ E+ TG+ P+ + I+N
Sbjct: 177 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN-INNR 235
Query: 180 AATLLKIACSNEKPHFP---TQFFKKVLDFLAKCLERKPEKR 218
+ + P + K + +A+CL++K ++R
Sbjct: 236 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 277
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 93/200 (46%), Gaps = 20/200 (10%)
Query: 44 KTVNIFMEYMAGGSLLD--VAEKFGGTLDAGVIRLY---TKEILHGNGILHCDLKCNNVL 98
K V + E GG LLD + +KF +A + T E LH G++H DLK +N+L
Sbjct: 89 KYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNIL 148
Query: 99 L----GSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATD 154
G+ +++ D G A+++ NG L T ++APEVL +G D A D
Sbjct: 149 YVDESGNPESIRICDFGFAKQLR--AENGLLXTPCY----TANFVAPEVLERQGYDAACD 202
Query: 155 IWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVL----DFLAKC 210
IWSLG ++ TG P+ + + +L S K ++ V D ++K
Sbjct: 203 IWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSG-KFSLSGGYWNSVSDTAKDLVSKX 261
Query: 211 LERKPEKRWSAEELLNHTFI 230
L P +R +A +L H +I
Sbjct: 262 LHVDPHQRLTAALVLRHPWI 281
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 18/182 (9%)
Query: 1 MNKGTGALFVVKSAE--SEAGVQALRNEAEIRQSLNSPNIGRN-------GEKTVNIFME 51
+ TG + VK + +E ++ E EI +SL NI + G + + + ME
Sbjct: 37 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 96
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDV 105
Y+ GSL D +K +D + YT +I G L H DL N+L+ + V
Sbjct: 97 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV 156
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
K+ D G + + K +K+ +S W APE L A+D+WS G ++ E+
Sbjct: 157 KIGDFGLTKVLPQDKEXXKVKEPGES---PIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
Query: 166 AT 167
T
Sbjct: 214 FT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 18/182 (9%)
Query: 1 MNKGTGALFVVKSAE--SEAGVQALRNEAEIRQSLNSPNIGRN-------GEKTVNIFME 51
+ TG + VK + +E ++ E EI +SL NI + G + + + ME
Sbjct: 39 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 98
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDV 105
Y+ GSL D +K +D + YT +I G L H DL N+L+ + V
Sbjct: 99 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV 158
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
K+ D G + + K +K+ +S W APE L A+D+WS G ++ E+
Sbjct: 159 KIGDFGLTKVLPQDKEXXKVKEPGES---PIFWYAPESLTESKFSVASDVWSFGVVLYEL 215
Query: 166 AT 167
T
Sbjct: 216 FT 217
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 18/182 (9%)
Query: 1 MNKGTGALFVVKSAE--SEAGVQALRNEAEIRQSLNSPNIGRN-------GEKTVNIFME 51
+ TG + VK + +E ++ E EI +SL NI + G + + + ME
Sbjct: 65 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 124
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDV 105
Y+ GSL D +K +D + YT +I G L H DL N+L+ + V
Sbjct: 125 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV 184
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
K+ D G + + K +K+ +S W APE L A+D+WS G ++ E+
Sbjct: 185 KIGDFGLTKVLPQDKEXXKVKEPGES---PIFWYAPESLTESKFSVASDVWSFGVVLYEL 241
Query: 166 AT 167
T
Sbjct: 242 FT 243
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 112/272 (41%), Gaps = 51/272 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 24 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 83
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 84 LHQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 141
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 142 IKLADFGLARAF------GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 195
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 196 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 255
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFI 230
L++ L P KR SA+ L H F
Sbjct: 256 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H +GI+H DLK N L+ G +KL D G A N ++ + +G +M P
Sbjct: 171 IHQHGIVHSDLKPANFLIVD-GMLKLIDFGIA---NQMQPDTTSVVKDSQVGAVN-YMPP 225
Query: 142 EVLRN-----------EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN 190
E +++ + +D+WSLGC++ M G+ P+ +I N + L I N
Sbjct: 226 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPN 284
Query: 191 EKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
+ FP K + D L CL+R P++R S ELL H ++
Sbjct: 285 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 18/182 (9%)
Query: 1 MNKGTGALFVVKSAE--SEAGVQALRNEAEIRQSLNSPNIGRN-------GEKTVNIFME 51
+ TG + VK + +E ++ E EI +SL NI + G + + + ME
Sbjct: 40 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 99
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDV 105
Y+ GSL D +K +D + YT +I G L H DL N+L+ + V
Sbjct: 100 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV 159
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
K+ D G + + K +K+ +S W APE L A+D+WS G ++ E+
Sbjct: 160 KIGDFGLTKVLPQDKEXXKVKEPGES---PIFWYAPESLTESKFSVASDVWSFGVVLYEL 216
Query: 166 AT 167
T
Sbjct: 217 FT 218
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 23/222 (10%)
Query: 20 VQALRNEAEIRQSLNSPNI-----GRNGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI 74
V E I + L PNI ++I EY++ GSL + K G
Sbjct: 78 VNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDER 137
Query: 75 RLYTK--------EILHGNG--ILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGN 124
R + LH I+H +LK N+L+ VK+ D G +R LK +
Sbjct: 138 RRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR----LKASTF 193
Query: 125 LKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLL 184
L S +S GT WMAPEVLR+E + +D++S G ++ E+AT + PWG+ N A +
Sbjct: 194 L--SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGN--LNPAQVVA 249
Query: 185 KIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226
+ ++ P +V + C +P KR S +++
Sbjct: 250 AVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMD 291
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 18/182 (9%)
Query: 1 MNKGTGALFVVKSAE--SEAGVQALRNEAEIRQSLNSPNIGRN-------GEKTVNIFME 51
+ TG + VK + +E ++ E EI +SL NI + G + + + ME
Sbjct: 34 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 93
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDV 105
Y+ GSL D +K +D + YT +I G L H DL N+L+ + V
Sbjct: 94 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV 153
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
K+ D G + + K +K+ +S W APE L A+D+WS G ++ E+
Sbjct: 154 KIGDFGLTKVLPQDKEXXKVKEPGES---PIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
Query: 166 AT 167
T
Sbjct: 211 FT 212
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 21/222 (9%)
Query: 13 SAESEAGVQALRNEAEIRQSLNSPNI----GRNGEKTVNIFMEYMAGGSLLD----VAEK 64
+A + +QA +NE + + NI G + + + I ++ G SL + K
Sbjct: 41 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK 100
Query: 65 FGGTLDAGVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
F + R + + LH I+H DLK NN+ L VK+ D G A K+
Sbjct: 101 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATE----KSR 156
Query: 123 GNLKQSWQSIGGTQLWMAPEVLRNEG---LDFATDIWSLGCMVIEMATGRPPWGDKISNA 179
+ ++ + G+ LWMAPEV+R + F +D+++ G ++ E+ TG+ P+ + I+N
Sbjct: 157 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN-INNR 215
Query: 180 AATLLKIACSNEKPHFP---TQFFKKVLDFLAKCLERKPEKR 218
+ + P + K + +A+CL++K ++R
Sbjct: 216 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 257
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 18/182 (9%)
Query: 1 MNKGTGALFVVKSAE--SEAGVQALRNEAEIRQSLNSPNIGRN-------GEKTVNIFME 51
+ TG + VK + +E ++ E EI +SL NI + G + + + ME
Sbjct: 41 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 100
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDV 105
Y+ GSL D +K +D + YT +I G L H DL N+L+ + V
Sbjct: 101 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV 160
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
K+ D G + + K +K+ +S W APE L A+D+WS G ++ E+
Sbjct: 161 KIGDFGLTKVLPQDKEXXKVKEPGES---PIFWYAPESLTESKFSVASDVWSFGVVLYEL 217
Query: 166 AT 167
T
Sbjct: 218 FT 219
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 18/182 (9%)
Query: 1 MNKGTGALFVVKSAE--SEAGVQALRNEAEIRQSLNSPNIGRN-------GEKTVNIFME 51
+ TG + VK + +E ++ E EI +SL NI + G + + + ME
Sbjct: 34 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 93
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDV 105
Y+ GSL D +K +D + YT +I G L H DL N+L+ + V
Sbjct: 94 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV 153
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
K+ D G + + K +K+ +S W APE L A+D+WS G ++ E+
Sbjct: 154 KIGDFGLTKVLPQDKEXXKVKEPGES---PIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
Query: 166 AT 167
T
Sbjct: 211 FT 212
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 21/222 (9%)
Query: 13 SAESEAGVQALRNEAEIRQSLNSPNI----GRNGEKTVNIFMEYMAGGSLLD----VAEK 64
+A + +QA +NE + + NI G + + + I ++ G SL + K
Sbjct: 69 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK 128
Query: 65 FGGTLDAGVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
F + R + + LH I+H DLK NN+ L VK+ D G A K+
Sbjct: 129 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATE----KSR 184
Query: 123 GNLKQSWQSIGGTQLWMAPEVLRNEG---LDFATDIWSLGCMVIEMATGRPPWGDKISNA 179
+ ++ + G+ LWMAPEV+R + F +D+++ G ++ E+ TG+ P+ + I+N
Sbjct: 185 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN-INNR 243
Query: 180 AATLLKIACSNEKPHFP---TQFFKKVLDFLAKCLERKPEKR 218
+ + P + K + +A+CL++K ++R
Sbjct: 244 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 285
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 96/222 (43%), Gaps = 23/222 (10%)
Query: 20 VQALRNEAEIRQSLNSPNI-----GRNGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI 74
V E I + L PNI ++I EY++ GSL + K G
Sbjct: 78 VNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDER 137
Query: 75 RLYTK--------EILHGNG--ILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGN 124
R + LH I+H DLK N+L+ VK+ D G +R LK +
Sbjct: 138 RRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR----LKASXF 193
Query: 125 LKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLL 184
L + GT WMAPEVLR+E + +D++S G ++ E+AT + PWG+ N A +
Sbjct: 194 LXS--KXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGN--LNPAQVVA 249
Query: 185 KIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226
+ ++ P +V + C +P KR S +++
Sbjct: 250 AVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMD 291
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 23/187 (12%)
Query: 61 VAEKFGGTLDAGVIRLYTKEILHGN-GILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDL 119
+ E G + +++ E LH ++H D+K +NVL+ + G VK+ D G + + D
Sbjct: 150 IPEDILGKIAVSIVKAL--EHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD- 206
Query: 120 KNNGNLKQSWQSIGGTQLWMAPEVLRNE----GLDFATDIWSLGCMVIEMATGRPP---W 172
++ ++ + G + +MAPE + E G +DIWSLG +IE+A R P W
Sbjct: 207 ----SVAKTIDA--GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW 260
Query: 173 GDKISNAAATLLKIACSNEKPHFPT-QFFKKVLDFLAKCLERKPEKRWSAEELLNHTFIS 231
G LK P P +F + +DF ++CL++ ++R + EL+ H F +
Sbjct: 261 GTPFQQ-----LKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFT 315
Query: 232 GNAKKNS 238
+ K +
Sbjct: 316 LHESKGT 322
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 18/182 (9%)
Query: 1 MNKGTGALFVVKSAE--SEAGVQALRNEAEIRQSLNSPNIGRN-------GEKTVNIFME 51
+ TG + VK + +E ++ E EI +SL NI + G + + + ME
Sbjct: 52 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 111
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDV 105
Y+ GSL D +K +D + YT +I G L H DL N+L+ + V
Sbjct: 112 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV 171
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
K+ D G + + K +K+ +S W APE L A+D+WS G ++ E+
Sbjct: 172 KIGDFGLTKVLPQDKEXXKVKEPGES---PIFWYAPESLTESKFSVASDVWSFGVVLYEL 228
Query: 166 AT 167
T
Sbjct: 229 FT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 18/182 (9%)
Query: 1 MNKGTGALFVVKSAE--SEAGVQALRNEAEIRQSLNSPNIGRN-------GEKTVNIFME 51
+ TG + VK + +E ++ E EI +SL NI + G + + + ME
Sbjct: 52 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 111
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDV 105
Y+ GSL D +K +D + YT +I G L H DL N+L+ + V
Sbjct: 112 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV 171
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
K+ D G + + K +K+ +S W APE L A+D+WS G ++ E+
Sbjct: 172 KIGDFGLTKVLPQDKEXXKVKEPGES---PIFWYAPESLTESKFSVASDVWSFGVVLYEL 228
Query: 166 AT 167
T
Sbjct: 229 FT 230
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 96/220 (43%), Gaps = 42/220 (19%)
Query: 57 SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDL 110
++LD E F LD V++ Y +I+ H + I+H D+K N+L+ G VKL D
Sbjct: 109 TILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDF 168
Query: 111 GCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNE-GLDFATDIWSLGCMVIEMATGR 169
G AR L G + + T+ + APE+L + A D+W++GC+V EM G
Sbjct: 169 GFART---LAAPGEV---YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
Query: 170 P--PWGDKISNAAATLLKIA--------CSNEKPHFP-----------------TQFFKK 202
P P I ++ + N+ P F + +
Sbjct: 223 PLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEV 282
Query: 203 VLDFLAKCLERKPEKRWSAEELLNHTF--ISGNAKKNSTE 240
V+D KCL P+KR ELL+H F + G A++ S E
Sbjct: 283 VIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAERFSQE 322
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWM 139
E LH I++ DLK N+LL HG +++ DLG A V + Q+ + GT +M
Sbjct: 300 EDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE-------GQTIKGRVGTVGYM 352
Query: 140 APEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQF 199
APEV++NE F+ D W+LGC++ EM G+ P+ + ++ + +F
Sbjct: 353 APEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERF 412
Query: 200 FKKVLDFLAKCLERKPEKRW-----SAEELLNHTFI 230
+ ++ L + P +R SA E+ H
Sbjct: 413 SPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLF 448
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 113/254 (44%), Gaps = 35/254 (13%)
Query: 3 KGTGALFVVK------SAESEAGV--QALRNEAEIRQSLNSPNI-----GRNGEKTVNIF 49
K TG + K S S GV + + E I + + PNI V +
Sbjct: 34 KSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLI 93
Query: 50 MEYMAGGSLLD-VAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSH 102
+E ++GG L D +A+K +L + K+IL H I H DLK N++L
Sbjct: 94 LELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDK 151
Query: 103 G----DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSL 158
+KL D G A + D +++I GT ++APE++ E L D+WS+
Sbjct: 152 NIPIPHIKLIDFGLAHEIED-------GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 204
Query: 159 GCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEK 217
G + + +G P+ GD A + ++ ++ F +Q + DF+ K L ++ K
Sbjct: 205 GVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFF-SQTSELAKDFIRKLLVKETRK 263
Query: 218 RWSAEELLNHTFIS 231
R + +E L H +I+
Sbjct: 264 RLTIQEALRHPWIT 277
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 17/177 (9%)
Query: 48 IFMEYMAGGSLLDVAEKFGG-TLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLG 100
+ MEY+ G +L + E G ++D + +T +IL H I+H D+K N+L+
Sbjct: 88 LVMEYIEGPTLSEYIESHGPLSVDTAI--NFTNQILDGIKHAHDMRIVHRDIKPQNILID 145
Query: 101 SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGC 160
S+ +K+ D G A+ +++ +L Q+ +G Q + +PE + E D TDI+S+G
Sbjct: 146 SNKTLKIFDFGIAKALSE----TSLTQTNHVLGTVQ-YFSPEQAKGEATDECTDIYSIGI 200
Query: 161 MVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEK 217
++ EM G PP+ A ++ + P+ T K + L+ + R EK
Sbjct: 201 VLYEMLVGEPPFN---GETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEK 254
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 113/277 (40%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + +K E+E E + + LN PNI + + E + + E+
Sbjct: 27 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEH 86
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 87 VDQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 144
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 145 IKLADFGLARAF------GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 198
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 199 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 258
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 259 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWM 139
E LH I++ DLK N+LL HG +++ DLG A V + Q+ + GT +M
Sbjct: 300 EDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE-------GQTIKGRVGTVGYM 352
Query: 140 APEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQF 199
APEV++NE F+ D W+LGC++ EM G+ P+ + ++ + +F
Sbjct: 353 APEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERF 412
Query: 200 FKKVLDFLAKCLERKPEKRW-----SAEELLNHTFI 230
+ ++ L + P +R SA E+ H
Sbjct: 413 SPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLF 448
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 29/237 (12%)
Query: 12 KSAESEAGVQALRNEAEIRQSLNSPNIGRNGE----KTVNIFM-EYMAGGSLLD-VAEKF 65
KS+ + + E I + + PN+ E KT I + E +AGG L D +AEK
Sbjct: 50 KSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKE 109
Query: 66 GGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHG----DVKLPDLGCARR 115
T + + K+IL H I H DLK N++L +K+ D G A +
Sbjct: 110 SLTEEEAT--EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 116 VNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPW-GD 174
++ GN +++I GT ++APE++ E L D+WS+G + + +G P+ GD
Sbjct: 168 ID----FGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 175 KISNAAATLLKIACSNEKPHFP-TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
A + + E +F T K DF+ + L + P+KR + ++ L H +I
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAK--DFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 18/182 (9%)
Query: 1 MNKGTGALFVVKSAE--SEAGVQALRNEAEIRQSLNSPNIGRN-------GEKTVNIFME 51
+ TG + VK + +E ++ E EI +SL NI + G + + + ME
Sbjct: 34 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 93
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDV 105
Y+ GSL D +K +D + YT +I G L H DL N+L+ + V
Sbjct: 94 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV 153
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
K+ D G + + K +K+ +S W APE L A+D+WS G ++ E+
Sbjct: 154 KIGDFGLTKVLPQDKEFFKVKEPGES---PIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
Query: 166 AT 167
T
Sbjct: 211 FT 212
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 112/277 (40%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + + E+E E + + LN PNI + + E + + E+
Sbjct: 24 NKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 83
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 84 LHQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 141
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 142 IKLADFGLARAF------GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 195
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 196 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 255
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 256 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 112/277 (40%), Gaps = 51/277 (18%)
Query: 2 NKGTGALFVVK----SAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEY 52
NK TG + + E+E E + + LN PNI + + E + + E+
Sbjct: 23 NKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 82
Query: 53 MAGG--SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGD 104
+ +D + G L +I+ Y ++L H + +LH DLK N+L+ + G
Sbjct: 83 LHQDLKKFMDASALTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 140
Query: 105 VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVI 163
+KL D G AR G +++ T + APE+L + A DIWSLGC+
Sbjct: 141 IKLADFGLARAF------GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 194
Query: 164 EMATGRP--PWGDKISNAAATLLKIACSNE------------KPHFPT---QFFKKVL-- 204
EM T R P +I + +E KP FP Q F KV+
Sbjct: 195 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 254
Query: 205 ------DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
L++ L P KR SA+ L H F K
Sbjct: 255 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 18/182 (9%)
Query: 1 MNKGTGALFVVKSAE--SEAGVQALRNEAEIRQSLNSPNIGRN-------GEKTVNIFME 51
+ TG + VK + +E ++ E EI +SL NI + G + + + ME
Sbjct: 37 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 96
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDV 105
Y+ GSL D + +D + YT +I G L H DL N+L+ + V
Sbjct: 97 YLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV 156
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
K+ D G + + K +K+ +S W APE L A+D+WS G ++ E+
Sbjct: 157 KIGDFGLTKVLPQDKEXXKVKEPGES---PIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
Query: 166 AT 167
T
Sbjct: 214 FT 215
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 109/237 (45%), Gaps = 32/237 (13%)
Query: 5 TGALFVVKSAESEAGVQ--ALRN---EAEIRQSLNSP---NIGRNGEKTVNIFM--EYMA 54
T ++ +K + V+ +RN E +I Q L P N+ + + ++FM + +
Sbjct: 39 TKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLL 98
Query: 55 GGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLP 108
GG L ++ ++L+ E+ L I+H D+K +N+LL HG V +
Sbjct: 99 GGDLRYHLQQ-NVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHIT 157
Query: 109 DLGCARRVNDLKNNGNLKQSWQ--SIGGTQLWMAPEVLRNE---GLDFATDIWSLGCMVI 163
D A L + Q ++ GT+ +MAPE+ + G FA D WSLG
Sbjct: 158 DFNIA---------AMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAY 208
Query: 164 EMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWS 220
E+ GR P+ + S ++ ++ +P+ + ++++ L K LE P++R+S
Sbjct: 209 ELLRGRRPYHIRSSTSSKEIVH-TFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFS 264
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 21/182 (11%)
Query: 2 NKGTGALFVVKSAESEAGVQ---ALRNEAEIRQSLNSPNIGR-------NGEKTVNIFME 51
N GTG + VK+ + G Q + E EI ++L +I + GEK+V + ME
Sbjct: 34 NDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVME 93
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDV 105
Y+ GSL D + + + L+ ++I LH +H L NVLL + V
Sbjct: 94 YVPLGSLRDYLPRH--CVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLV 151
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
K+ D G A+ V + +++ S W APE L+ +A+D+WS G + E+
Sbjct: 152 KIGDFGLAKAVPEGHEYYRVREDGDS---PVFWYAPECLKECKFYYASDVWSFGVTLYEL 208
Query: 166 AT 167
T
Sbjct: 209 LT 210
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 46 VNIFMEYMAGGSLLD-VAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVL 98
V + +E ++GG L D +A+K +L + K+IL H I H DLK N++
Sbjct: 90 VVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIM 147
Query: 99 LGSHG----DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATD 154
L +KL D G A + D +++I GT ++APE++ E L D
Sbjct: 148 LLDKNIPIPHIKLIDFGLAHEIED-------GVEFKNIFGTPEFVAPEIVNYEPLGLEAD 200
Query: 155 IWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLER 213
+WS+G + + +G P+ GD A + ++ ++ F +Q + DF+ K L +
Sbjct: 201 MWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFF-SQTSELAKDFIRKLLVK 259
Query: 214 KPEKRWSAEELLNHTFIS 231
+ KR + +E L H +I+
Sbjct: 260 ETRKRLTIQEALRHPWIT 277
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 83/188 (44%), Gaps = 14/188 (7%)
Query: 46 VNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTK-----EILHGNGILHCDLKCNNVLLG 100
VNIFME + GGSL + ++ G + + + E LH ILH D+K +NVLL
Sbjct: 160 VNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLS 219
Query: 101 SHGD-VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLG 159
S G L D G A + G + I GT+ MAPEV+ D D+WS
Sbjct: 220 SDGSHAALCDFGHAVCLQP-DGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSC 278
Query: 160 CMVIEMATGRPPWGDKISNAAATLLKIACSNEKP---HFPTQFFKKVLDFLAKCLERKPE 216
CM++ M G PW LKIA +E P P + + L ++P
Sbjct: 279 CMMLHMLNGCHPWTQFFRGPLC--LKIA--SEPPPVREIPPSCAPLTAQAIQEGLRKEPI 334
Query: 217 KRWSAEEL 224
R SA EL
Sbjct: 335 HRVSAAEL 342
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 21/182 (11%)
Query: 2 NKGTGALFVVKSAESEAGVQ---ALRNEAEIRQSLNSPNIGR-------NGEKTVNIFME 51
N GTG + VK+ + G Q + E EI ++L +I + GEK+V + ME
Sbjct: 33 NDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVME 92
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDV 105
Y+ GSL D + + + L+ ++I LH +H L NVLL + V
Sbjct: 93 YVPLGSLRDYLPRH--CVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLV 150
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
K+ D G A+ V + +++ S W APE L+ +A+D+WS G + E+
Sbjct: 151 KIGDFGLAKAVPEGHEYYRVREDGDS---PVFWYAPECLKECKFYYASDVWSFGVTLYEL 207
Query: 166 AT 167
T
Sbjct: 208 LT 209
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 46 VNIFMEYMAGGSLLD-VAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVL 98
V + +E ++GG L D +A+K +L + K+IL H I H DLK N++
Sbjct: 90 VVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIM 147
Query: 99 LGSHG----DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATD 154
L +KL D G A + D +++I GT ++APE++ E L D
Sbjct: 148 LLDKNIPIPHIKLIDFGLAHEIED-------GVEFKNIFGTPEFVAPEIVNYEPLGLEAD 200
Query: 155 IWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLER 213
+WS+G + + +G P+ GD A + ++ ++ F +Q + DF+ K L +
Sbjct: 201 MWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFF-SQTSELAKDFIRKLLVK 259
Query: 214 KPEKRWSAEELLNHTFIS 231
+ KR + +E L H +I+
Sbjct: 260 ETRKRLTIQEALRHPWIT 277
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 86/190 (45%), Gaps = 18/190 (9%)
Query: 46 VNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTK-----EILHGNGILHCDLKCNNVLLG 100
VNIFME + GGSL + ++ G + + + E LH ILH D+K +NVLL
Sbjct: 141 VNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLS 200
Query: 101 SHGD-VKLPDLGCARRVNDLKNNGNLKQ--SWQSIGGTQLWMAPEVLRNEGLDFATDIWS 157
S G L D G A L+ +G K + I GT+ MAPEV+ D D+WS
Sbjct: 201 SDGSHAALCDFGHA---VCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWS 257
Query: 158 LGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP---HFPTQFFKKVLDFLAKCLERK 214
CM++ M G PW LKIA +E P P + + L ++
Sbjct: 258 SCCMMLHMLNGCHPWTQFFRGPLC--LKIA--SEPPPVREIPPSCAPLTAQAIQEGLRKE 313
Query: 215 PEKRWSAEEL 224
P R SA EL
Sbjct: 314 PIHRVSAAEL 323
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 1 MNKGTGALFVVKSAESEAGV---QALRNEAEIRQSLNSPNI----GRNGEKTVN-IFMEY 52
+N+ T VK + + V + ++ E I + LN N+ G E + +F+EY
Sbjct: 26 VNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 53 MAGGSLLDV-----------AEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGS 101
+GG L D A++F L AGV+ LHG GI H D+K N+LL
Sbjct: 86 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV------YLHGIGITHRDIKPENLLLDE 139
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-RNEGLDFATDIWSLGC 160
++K+ D G A + N ++ + GT ++APE+L R E D+WS G
Sbjct: 140 RDNLKISDFGLA----TVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 161 MVIEMATGRPPW 172
++ M G PW
Sbjct: 196 VLTAMLAGELPW 207
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 18/182 (9%)
Query: 1 MNKGTGALFVVKSAE--SEAGVQALRNEAEIRQSLNSPNIGRN-------GEKTVNIFME 51
+ TG + VK + +E ++ E EI +SL NI + G + + + ME
Sbjct: 35 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 94
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDV 105
Y+ GSL D +K +D + YT +I G L H +L N+L+ + V
Sbjct: 95 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRV 154
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
K+ D G + + K +K+ +S W APE L A+D+WS G ++ E+
Sbjct: 155 KIGDFGLTKVLPQDKEYYKVKEPGES---PIFWYAPESLTESKFSVASDVWSFGVVLYEL 211
Query: 166 AT 167
T
Sbjct: 212 FT 213
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 30/202 (14%)
Query: 46 VNIFMEYMAGGSLLD-VAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVL 98
V + +E ++GG L D +A+K +L + K+IL H I H DLK N++
Sbjct: 90 VVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIM 147
Query: 99 LGSHG----DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATD 154
L +KL D G A + D +++I GT ++APE++ E L D
Sbjct: 148 LLDKNIPIPHIKLIDFGLAHEIED-------GVEFKNIFGTPEFVAPEIVNYEPLGLEAD 200
Query: 155 IWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQFFKKV----LDFLAK 209
+WS+G + + +G P+ GD A + ++ F +FF DF+ K
Sbjct: 201 MWSIGVITYILLSGASPFLGDTKQETLANITSVSYD-----FDEEFFSHTSELAKDFIRK 255
Query: 210 CLERKPEKRWSAEELLNHTFIS 231
L ++ KR + +E L H +I+
Sbjct: 256 LLVKETRKRLTIQEALRHPWIT 277
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 1 MNKGTGALFVVKSAESEAGV---QALRNEAEIRQSLNSPNI----GRNGEKTVN-IFMEY 52
+N+ T VK + + V + ++ E I + LN N+ G E + +F+EY
Sbjct: 27 VNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 53 MAGGSLLDV-----------AEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGS 101
+GG L D A++F L AGV+ LHG GI H D+K N+LL
Sbjct: 87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV------YLHGIGITHRDIKPENLLLDE 140
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-RNEGLDFATDIWSLGC 160
++K+ D G A + N ++ + GT ++APE+L R E D+WS G
Sbjct: 141 RDNLKISDFGLA----TVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 161 MVIEMATGRPPW 172
++ M G PW
Sbjct: 197 VLTAMLAGELPW 208
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 30/238 (12%)
Query: 3 KGTGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGS 57
K + K+ + + +Q L E I + LN PNI + EKT+ + MEY +GG
Sbjct: 40 KEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 58 LLD--VAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPD 109
+ D VA G + R ++I+ H I+H DLK N+LL + ++K+ D
Sbjct: 100 VFDYLVAH---GRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIAD 156
Query: 110 LGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFA-TDIWSLGCMVIEMATG 168
G + N + G+ + APE+ + + D D+WSLG ++ + +G
Sbjct: 157 FGFS-------NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Query: 169 RPPW-GDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
P+ G + +L+ K P + L K L P KR + E+++
Sbjct: 210 SLPFDGQNLKELRERVLR-----GKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 30/202 (14%)
Query: 46 VNIFMEYMAGGSLLD-VAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVL 98
V + +E ++GG L D +A+K +L + K+IL H I H DLK N++
Sbjct: 90 VVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIM 147
Query: 99 LGSHG----DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATD 154
L +KL D G A + D +++I GT ++APE++ E L D
Sbjct: 148 LLDKNIPIPHIKLIDFGLAHEIED-------GVEFKNIFGTPEFVAPEIVNYEPLGLEAD 200
Query: 155 IWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQFFKKV----LDFLAK 209
+WS+G + + +G P+ GD A + ++ F +FF DF+ K
Sbjct: 201 MWSIGVITYILLSGASPFLGDTKQETLANITSVSYD-----FDEEFFSHTSELAKDFIRK 255
Query: 210 CLERKPEKRWSAEELLNHTFIS 231
L ++ KR + +E L H +I+
Sbjct: 256 LLVKETRKRLTIQEALRHPWIT 277
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 30/238 (12%)
Query: 3 KGTGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGS 57
K + K+ + + +Q L E I + LN PNI + EKT+ + MEY +GG
Sbjct: 40 KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 58 LLD--VAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPD 109
+ D VA G + R ++I+ H I+H DLK N+LL + ++K+ D
Sbjct: 100 VFDYLVAH---GRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIAD 156
Query: 110 LGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFA-TDIWSLGCMVIEMATG 168
G + N + G+ + APE+ + + D D+WSLG ++ + +G
Sbjct: 157 FGFS-------NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Query: 169 RPPW-GDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
P+ G + +L+ K P + L K L P KR + E+++
Sbjct: 210 SLPFDGQNLKELRERVLR-----GKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 100/233 (42%), Gaps = 31/233 (13%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGRNGEKTVN---IFMEYMAGGSLLDV---AEK 64
+K ESE+ +A E +N PNI + +N + MEY GGSL +V AE
Sbjct: 37 IKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLHGAEP 96
Query: 65 FGGTLDA-----------GVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDV-KLPDLGC 112
A GV L++ + ++H DLK N+LL + G V K+ D G
Sbjct: 97 LPYYTAAHAMSWCLQCSQGVAYLHS---MQPKALIHRDLKPPNLLLVAGGTVLKICDFGT 153
Query: 113 ARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPW 172
A + N G+ WMAPEV D++S G ++ E+ T R P+
Sbjct: 154 ACDIQTHMTNNK---------GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 204
Query: 173 GDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
D+I A ++ + +P K + + +C + P +R S EE++
Sbjct: 205 -DEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIV 256
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 30/202 (14%)
Query: 46 VNIFMEYMAGGSLLD-VAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVL 98
V + +E ++GG L D +A+K +L + K+IL H I H DLK N++
Sbjct: 90 VVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIM 147
Query: 99 LGSHG----DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATD 154
L +KL D G A + D +++I GT ++APE++ E L D
Sbjct: 148 LLDKNIPIPHIKLIDFGLAHEIED-------GVEFKNIFGTPEFVAPEIVNYEPLGLEAD 200
Query: 155 IWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQFFKKV----LDFLAK 209
+WS+G + + +G P+ GD A + ++ F +FF DF+ K
Sbjct: 201 MWSIGVITYILLSGASPFLGDTKQETLANITSVSYD-----FDEEFFSHTSELAKDFIRK 255
Query: 210 CLERKPEKRWSAEELLNHTFIS 231
L ++ KR + +E L H +I+
Sbjct: 256 LLVKETRKRLTIQEALRHPWIT 277
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 100/233 (42%), Gaps = 31/233 (13%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGRNGEKTVN---IFMEYMAGGSLLDV---AEK 64
+K ESE+ +A E +N PNI + +N + MEY GGSL +V AE
Sbjct: 36 IKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLHGAEP 95
Query: 65 FGGTLDA-----------GVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDV-KLPDLGC 112
A GV L++ + ++H DLK N+LL + G V K+ D G
Sbjct: 96 LPYYTAAHAMSWCLQCSQGVAYLHS---MQPKALIHRDLKPPNLLLVAGGTVLKICDFGT 152
Query: 113 ARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPW 172
A + N G+ WMAPEV D++S G ++ E+ T R P+
Sbjct: 153 ACDIQTHMTNNK---------GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 203
Query: 173 GDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
D+I A ++ + +P K + + +C + P +R S EE++
Sbjct: 204 -DEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIV 255
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 30/238 (12%)
Query: 3 KGTGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGS 57
K + K+ + + +Q L E I + LN PNI + EKT+ + MEY +GG
Sbjct: 40 KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 58 LLD--VAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPD 109
+ D VA G + R ++I+ H I+H DLK N+LL + ++K+ D
Sbjct: 100 VFDYLVAH---GRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIAD 156
Query: 110 LGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFA-TDIWSLGCMVIEMATG 168
G + N + G+ + APE+ + + D D+WSLG ++ + +G
Sbjct: 157 FGFS-------NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Query: 169 RPPW-GDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
P+ G + +L+ K P + L K L P KR + E+++
Sbjct: 210 SLPFDGQNLKELRERVLR-----GKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 1 MNKGTGALFVVKSAESEAGV---QALRNEAEIRQSLNSPNI----GRNGEKTVN-IFMEY 52
+N+ T VK + + V + ++ E I + LN N+ G E + +F+EY
Sbjct: 26 VNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 53 MAGGSLLDV-----------AEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGS 101
+GG L D A++F L AGV+ LHG GI H D+K N+LL
Sbjct: 86 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV------YLHGIGITHRDIKPENLLLDE 139
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-RNEGLDFATDIWSLGC 160
++K+ D G A + N ++ + GT ++APE+L R E D+WS G
Sbjct: 140 RDNLKISDFGLA----TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 161 MVIEMATGRPPW 172
++ M G PW
Sbjct: 196 VLTAMLAGELPW 207
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 22/162 (13%)
Query: 26 EAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL------DVAEKFGGTLDAGVI 74
E +I NSP + + +K + + MEYM GG L+ DV EK+ A V+
Sbjct: 125 ERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVV 184
Query: 75 RLYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGG 134
+ +H G++H D+K +N+LL HG +KL D G ++++ G + + G
Sbjct: 185 --LALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE---TGMV--HCDTAVG 237
Query: 135 TQLWMAPEVLRNEGLD----FATDIWSLGCMVIEMATGRPPW 172
T +++PEVL+++G D D WS+G + EM G P+
Sbjct: 238 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 117/255 (45%), Gaps = 36/255 (14%)
Query: 1 MNKGTGALFVVKSAESEAGVQ--ALRNEAEIRQSLNSPNI-----GRNGEKTVNIFMEYM 53
+ K TG +FV K + + ++NE I L+ P + + + + +E++
Sbjct: 71 VEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 130
Query: 54 AGGSLLD--VAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSH--G 103
+GG L D AE + + +A VI Y ++ +H + I+H D+K N++ +
Sbjct: 131 SGGELFDRIAAEDYKMS-EAEVIN-YMRQACEGLKHMHEHSIVHLDIKPENIMCETKKAS 188
Query: 104 DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVI 163
VK+ D G A ++N + + T + APE++ E + F TD+W++G +
Sbjct: 189 SVKIIDFGLATKLNP-------DEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGY 241
Query: 164 EMATGRPPWGDKISNAAATLLKIA-CSNEKPHFPTQFFKKV----LDFLAKCLERKPEKR 218
+ +G P+ + + TL + C E F F V DF+ L+++P KR
Sbjct: 242 VLLSGLSPFAGE--DDLETLQNVKRCDWE---FDEDAFSSVSPEAKDFIKNLLQKEPRKR 296
Query: 219 WSAEELLNHTFISGN 233
+ + L H ++ G+
Sbjct: 297 LTVHDALEHPWLKGD 311
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 104/237 (43%), Gaps = 32/237 (13%)
Query: 20 VQALRNEAEI-----RQSLNSPNIGRNGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI 74
V R E ++ R+ + + E + + MEY GG LL + KFG + A +
Sbjct: 105 VSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMA 164
Query: 75 RLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQS 128
R Y EI +H G +H D+K +N+LL G ++L D G + L+ +G ++ S
Sbjct: 165 RFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLK---LRADGTVR-S 220
Query: 129 WQSIGGTQLWMAPEVLRNEGLDFAT-------DIWSLGCMVIEMATGRPPWGDKISNAAA 181
++ GT +++PE+L+ G T D W+LG EM G+ P+ + A
Sbjct: 221 LVAV-GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF--YADSTAE 277
Query: 182 TLLKIACSNEKPHFPTQ---FFKKVLDFLAKCLERKPEKRW---SAEELLNHTFISG 232
T KI E P ++ DF+ + L PE R A + H F G
Sbjct: 278 TYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLL-CPPETRLGRGGAGDFRTHPFFFG 333
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 81/182 (44%), Gaps = 18/182 (9%)
Query: 1 MNKGTGALFVVKSAE--SEAGVQALRNEAEIRQSLNSPNIGRN-------GEKTVNIFME 51
+ TG + VK + +E ++ E EI +SL NI + G + + + ME
Sbjct: 37 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 96
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDV 105
++ GSL + +K +D + YT +I G L H DL N+L+ + V
Sbjct: 97 FLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV 156
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
K+ D G + + K +K+ +S W APE L A+D+WS G ++ E+
Sbjct: 157 KIGDFGLTKVLPQDKEXXKVKEPGES---PIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
Query: 166 AT 167
T
Sbjct: 214 FT 215
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 102/238 (42%), Gaps = 30/238 (12%)
Query: 3 KGTGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGS 57
K + K+ + + +Q L E I + LN PNI + EKT+ + MEY +GG
Sbjct: 40 KEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 58 LLD--VAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPD 109
+ D VA G + R ++I+ H I+H DLK N+LL + ++K+ D
Sbjct: 100 VFDYLVAH---GRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIAD 156
Query: 110 LGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFA-TDIWSLGCMVIEMATG 168
G + N G+ + APE+ + + D D+WSLG ++ + +G
Sbjct: 157 FGFS-------NEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Query: 169 RPPW-GDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
P+ G + +L+ K P + L K L P KR + E+++
Sbjct: 210 SLPFDGQNLKELRERVLR-----GKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 46 VNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTK-----EILHGNGILHCDLKCNNVLLG 100
VNIFME + GGSL + ++ G + + + E LH ILH D+K +NVLL
Sbjct: 141 VNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLS 200
Query: 101 SHGD-VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLG 159
S G L D G A + G + I GT+ MAPEV+ + D DIWS
Sbjct: 201 SDGSRAALCDFGHALCLQP-DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSC 259
Query: 160 CMVIEMATGRPPW 172
CM++ M G PW
Sbjct: 260 CMMLHMLNGCHPW 272
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN-DLKNNGNLKQSWQSIGGTQLWMA 140
+H +LH DLK +N+LL + D+K+ D G AR + D + G L + T+ + A
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEY----VATRWYRA 195
Query: 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDK-----------------------I 176
PE++ N +G + DIWS+GC++ EM + RP + K I
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXI 255
Query: 177 SNAAA--TLLKIACSNEKP---HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
N A LL + N+ P FP K LD L K L P KR E+ L H ++
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 107/255 (41%), Gaps = 45/255 (17%)
Query: 14 AESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGT 68
AE E E + + L+ PNI + E+ + + E+M L V ++
Sbjct: 57 AEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTG 115
Query: 69 LDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
L I++Y ++L H + ILH DLK N+L+ S G +KL D G AR
Sbjct: 116 LQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAF------ 169
Query: 123 GNLKQSWQSIGGTQLWMAPEVLR-NEGLDFATDIWSLGCMVIEMATGRPPW-GDKISNAA 180
G +S+ T + AP+VL ++ + DIWS+GC+ EM TG+P + G +
Sbjct: 170 GIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQL 229
Query: 181 ATLLKIACSNEKPHFPT------------QFFKKV-------------LDFLAKCLERKP 215
+ I + +P Q F+K +D L+ L P
Sbjct: 230 PKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDP 289
Query: 216 EKRWSAEELLNHTFI 230
KR SA + +NH +
Sbjct: 290 NKRISARDAMNHPYF 304
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 46 VNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTK-----EILHGNGILHCDLKCNNVLLG 100
VNIFME + GGSL + ++ G + + + E LH ILH D+K +NVLL
Sbjct: 125 VNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLS 184
Query: 101 SHGD-VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLG 159
S G L D G A + G + I GT+ MAPEV+ + D DIWS
Sbjct: 185 SDGSRAALCDFGHALCLQP-DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSC 243
Query: 160 CMVIEMATGRPPW 172
CM++ M G PW
Sbjct: 244 CMMLHMLNGCHPW 256
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 109/241 (45%), Gaps = 30/241 (12%)
Query: 12 KSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLD--VAEK 64
K+ + +Q L E I + LN PNI + EKT+ + MEY +GG + D VA
Sbjct: 47 KTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH- 105
Query: 65 FGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVND 118
G + R ++I+ H I+H DLK N+LL + ++K+ D G + N+
Sbjct: 106 --GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS---NE 160
Query: 119 LKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFA-TDIWSLGCMVIEMATGRPPW-GDKI 176
G L + G+ + APE+ + + D D+WSLG ++ + +G P+ G +
Sbjct: 161 FTVGGKL----DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 216
Query: 177 SNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKK 236
+L+ K P + L + L P KR + E+++ +I+ ++
Sbjct: 217 KELRERVLR-----GKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEE 271
Query: 237 N 237
+
Sbjct: 272 D 272
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 102/238 (42%), Gaps = 30/238 (12%)
Query: 3 KGTGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGS 57
K + K+ + + +Q L E I + LN PNI + EKT+ + MEY +GG
Sbjct: 40 KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 58 LLD--VAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPD 109
+ D VA G + R ++I+ H I+H DLK N+LL + ++K+ D
Sbjct: 100 VFDYLVAH---GRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIAD 156
Query: 110 LGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFA-TDIWSLGCMVIEMATG 168
G + N + G + APE+ + + D D+WSLG ++ + +G
Sbjct: 157 FGFS-------NEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Query: 169 RPPW-GDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
P+ G + +L+ K P + L K L P KR + E+++
Sbjct: 210 SLPFDGQNLKELRERVLR-----GKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 87 ILHCDLKCNNVLLGSHGDVKLPDLGCA-RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL- 144
I+H D+K +N+LL G++KL D G + + V+ + + G + +MAPE +
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD--------AGCRPYMAPERID 198
Query: 145 ---RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPT---- 197
+G D +D+WSLG + E+ATGR P+ N+ L + P
Sbjct: 199 PSASRQGYDVRSDVWSLGITLYELATGRFPYPK--WNSVFDQLTQVVKGDPPQLSNSEER 256
Query: 198 QFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
+F ++F+ CL + KR +ELL H FI
Sbjct: 257 EFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 46 VNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTK-----EILHGNGILHCDLKCNNVLLG 100
VNIFME + GGSL + ++ G + + + E LH ILH D+K +NVLL
Sbjct: 139 VNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLS 198
Query: 101 SHGD-VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLG 159
S G L D G A + G + I GT+ MAPEV+ + D DIWS
Sbjct: 199 SDGSRAALCDFGHALCLQP-DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSC 257
Query: 160 CMVIEMATGRPPW 172
CM++ M G PW
Sbjct: 258 CMMLHMLNGCHPW 270
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 101/236 (42%), Gaps = 26/236 (11%)
Query: 3 KGTGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGS 57
K + K+ + + +Q L E I + LN PNI + EKT+ + MEY +GG
Sbjct: 33 KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 92
Query: 58 LLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLG 111
+ D G + R ++I+ H I+H DLK N+LL + ++K+ D G
Sbjct: 93 VFDYLVAHGWMKEKEA-RAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG 151
Query: 112 CARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLD-FATDIWSLGCMVIEMATGRP 170
+ N + G+ + APE+ + + D D+WSLG ++ + +G
Sbjct: 152 FS-------NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 204
Query: 171 PW-GDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
P+ G + +L+ K P + L K L P KR + E+++
Sbjct: 205 PFDGQNLKELRERVLR-----GKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 255
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 109/238 (45%), Gaps = 29/238 (12%)
Query: 10 VVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLD--VA 62
+ K++ S + L E + + L+ PNI + ++ + ME GG L D +
Sbjct: 70 IRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIH 129
Query: 63 EKFGGTLDAGVI---RLYTKEILHGNGILHCDLKCNNVLLGSHGD---VKLPDLGCARRV 116
+DA VI L LH + I+H DLK N+LL S +K+ D G +
Sbjct: 130 RMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV- 188
Query: 117 NDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKI 176
+N +K+ GT ++APEVLR + D D+WS+G ++ + G PP+G +
Sbjct: 189 --FENQKKMKERL----GTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAGYPPFGGQT 241
Query: 177 SNAAATLLKIACSNEKPHFPTQFFKKV----LDFLAKCLERKPEKRWSAEELLNHTFI 230
L K+ K F + +K V D + + L+ ++R SA++ L H +I
Sbjct: 242 DQ--EILRKV--EKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWI 295
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 107/255 (41%), Gaps = 45/255 (17%)
Query: 14 AESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGT 68
AE E E + + L+ PNI + E+ + + E+M L V ++
Sbjct: 57 AEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTG 115
Query: 69 LDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
L I++Y ++L H + ILH DLK N+L+ S G +KL D G AR
Sbjct: 116 LQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAF------ 169
Query: 123 GNLKQSWQSIGGTQLWMAPEVLR-NEGLDFATDIWSLGCMVIEMATGRPPW-GDKISNAA 180
G +S+ T + AP+VL ++ + DIWS+GC+ EM TG+P + G +
Sbjct: 170 GIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQL 229
Query: 181 ATLLKIACSNEKPHFPT------------QFFKKV-------------LDFLAKCLERKP 215
+ I + +P Q F+K +D L+ L P
Sbjct: 230 PKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDP 289
Query: 216 EKRWSAEELLNHTFI 230
KR SA + +NH +
Sbjct: 290 NKRISARDAMNHPYF 304
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 1 MNKGTGALFVVKSAESEAGV---QALRNEAEIRQSLNSPNI----GRNGEKTVN-IFMEY 52
+N+ T VK + + V + ++ E I + LN N+ G E + +F+EY
Sbjct: 26 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 53 MAGGSLLDV-----------AEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGS 101
+GG L D A++F L AGV+ LHG GI H D+K N+LL
Sbjct: 86 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV------YLHGIGITHRDIKPENLLLDE 139
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-RNEGLDFATDIWSLGC 160
++K+ D G A + N ++ + GT ++APE+L R E D+WS G
Sbjct: 140 RDNLKISDFGLA----TVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 161 MVIEMATGRPPW 172
++ M G PW
Sbjct: 196 VLTAMLAGELPW 207
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 1 MNKGTGALFVVKSAESEAGV---QALRNEAEIRQSLNSPNI----GRNGEKTVN-IFMEY 52
+N+ T VK + + V + ++ E I + LN N+ G E + +F+EY
Sbjct: 26 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 53 MAGGSLLDV-----------AEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGS 101
+GG L D A++F L AGV+ LHG GI H D+K N+LL
Sbjct: 86 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV------YLHGIGITHRDIKPENLLLDE 139
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-RNEGLDFATDIWSLGC 160
++K+ D G A + N ++ + GT ++APE+L R E D+WS G
Sbjct: 140 RDNLKISDFGLA----TVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 161 MVIEMATGRPPW 172
++ M G PW
Sbjct: 196 VLTAMLAGELPW 207
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 1 MNKGTGALFVVKSAESEAGV---QALRNEAEIRQSLNSPNI----GRNGEKTVN-IFMEY 52
+N+ T VK + + V + ++ E I + LN N+ G E + +F+EY
Sbjct: 26 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 53 MAGGSLLDV-----------AEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGS 101
+GG L D A++F L AGV+ LHG GI H D+K N+LL
Sbjct: 86 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV------YLHGIGITHRDIKPENLLLDE 139
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-RNEGLDFATDIWSLGC 160
++K+ D G A + N ++ + GT ++APE+L R E D+WS G
Sbjct: 140 RDNLKISDFGLAT----VFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 161 MVIEMATGRPPW 172
++ M G PW
Sbjct: 196 VLTAMLAGELPW 207
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 18/179 (10%)
Query: 31 QSLNSPNIGRNGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHG 84
Q + + + E + + M+Y GG LL + KF L + R Y E+ +H
Sbjct: 134 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ 193
Query: 85 NGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144
+H D+K +NVLL +G ++L D G ++ND +G ++ S GT +++PE+L
Sbjct: 194 LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMND---DGTVQSSVAV--GTPDYISPEIL 248
Query: 145 R--NEGLDFA---TDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQ 198
+ +G+ D WSLG + EM G P+ + T KI E+ FP+
Sbjct: 249 QAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF--YAESLVETYGKIMNHEERFQFPSH 305
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 18/179 (10%)
Query: 31 QSLNSPNIGRNGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHG 84
Q + + + E + + M+Y GG LL + KF L + R Y E+ +H
Sbjct: 150 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ 209
Query: 85 NGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144
+H D+K +NVLL +G ++L D G ++ND +G ++ S GT +++PE+L
Sbjct: 210 LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMND---DGTVQSSVAV--GTPDYISPEIL 264
Query: 145 R--NEGLDFA---TDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQ 198
+ +G+ D WSLG + EM G P+ + T KI E+ FP+
Sbjct: 265 QAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF--YAESLVETYGKIMNHEERFQFPSH 321
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 35/180 (19%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN-DLKNNGNLKQSWQSIGGTQLWMA 140
+H +LH DLK +N+LL + D+K+ D G AR + D + G L + T+ + A
Sbjct: 142 IHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYV----ATRWYRA 197
Query: 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRP-----PWGDKISN---------------- 178
PE++ N +G + DIWS+GC++ EM + RP + D++++
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCG 257
Query: 179 ----AAATLLKIACSNEKP---HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFIS 231
A LL + N+ P FP K LD L K L P KR E+ L H +++
Sbjct: 258 INLKARNYLLSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYLA 316
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 31/199 (15%)
Query: 50 MEYMAGGSLL-----------DVAEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVL 98
MEY GG L D A +G + + + L++++ +++ DLK N++
Sbjct: 227 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK-----NVVYRDLKLENLM 281
Query: 99 LGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSL 158
L G +K+ D G + +K+ +K + GT ++APEVL + A D W L
Sbjct: 282 LDKDGHIKITDFGLCK--EGIKDGATMK----TFCGTPEYLAPEVLEDNDYGRAVDWWGL 335
Query: 159 GCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
G ++ EM GR P+ ++ L+ + E+ FP + L+ L++ P++R
Sbjct: 336 GVVMYEMMCGRLPFYNQDHEKLFELILM----EEIRFPRTLGPEAKSLLSGLLKKDPKQR 391
Query: 219 W-----SAEELLNHTFISG 232
A+E++ H F +G
Sbjct: 392 LGGGSEDAKEIMQHRFFAG 410
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 31/199 (15%)
Query: 50 MEYMAGGSLL-----------DVAEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVL 98
MEY GG L D A +G + + + L++++ +++ DLK N++
Sbjct: 230 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK-----NVVYRDLKLENLM 284
Query: 99 LGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSL 158
L G +K+ D G + +K+ +K + GT ++APEVL + A D W L
Sbjct: 285 LDKDGHIKITDFGLCK--EGIKDGATMK----TFCGTPEYLAPEVLEDNDYGRAVDWWGL 338
Query: 159 GCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
G ++ EM GR P+ ++ L+ + E+ FP + L+ L++ P++R
Sbjct: 339 GVVMYEMMCGRLPFYNQDHEKLFELILM----EEIRFPRTLGPEAKSLLSGLLKKDPKQR 394
Query: 219 W-----SAEELLNHTFISG 232
A+E++ H F +G
Sbjct: 395 LGGGSEDAKEIMQHRFFAG 413
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 1 MNKGTGALFVVKSAESEAGV---QALRNEAEIRQSLNSPNI----GRNGEKTVN-IFMEY 52
+N+ T VK + + V + ++ E I + LN N+ G E + +F+EY
Sbjct: 26 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 53 MAGGSLLDV-----------AEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGS 101
+GG L D A++F L AGV+ LHG GI H D+K N+LL
Sbjct: 86 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV------YLHGIGITHRDIKPENLLLDE 139
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-RNEGLDFATDIWSLGC 160
++K+ D G A + N ++ + GT ++APE+L R E D+WS G
Sbjct: 140 RDNLKISDFGLA----TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 161 MVIEMATGRPPW 172
++ M G PW
Sbjct: 196 VLTAMLAGELPW 207
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 25/188 (13%)
Query: 61 VAEKFGGTLDAGVIRLYTKEILHGN-GILHCDLKCNNVLLGSHGDVKLPDLGCA-RRVND 118
+ E G + +++ E LH ++H D+K +NVL+ + G VK D G + V+D
Sbjct: 133 IPEDILGKIAVSIVK--ALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDD 190
Query: 119 LKNNGNLKQSWQSIGGTQLWMAPEVLRNE----GLDFATDIWSLGCMVIEMATGRPP--- 171
+ + + G + + APE + E G +DIWSLG IE+A R P
Sbjct: 191 VAKDID--------AGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDS 242
Query: 172 WGDKISNAAATLLKIACSNEKPHFPT-QFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
WG LK P P +F + +DF ++CL++ ++R + EL H F
Sbjct: 243 WGTPFQQ-----LKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFF 297
Query: 231 SGNAKKNS 238
+ + K +
Sbjct: 298 TLHESKGT 305
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 76/176 (43%), Gaps = 23/176 (13%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR------NGEKTVNIFMEYMAGGSLLDVAEK 64
VK +++A QA EA + L N+ + + + I EYMA GSL+D
Sbjct: 221 VKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS 280
Query: 65 FGGTLDAGVIRLY-------TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN 117
G ++ G L E L GN +H DL NVL+ K+ D G + +
Sbjct: 281 RGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340
Query: 118 DLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPW 172
++ G L W APE LR + +D+WS G ++ E+ + GR P+
Sbjct: 341 STQDTGKLPVKWT---------APEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 387
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 1 MNKGTGALFVVKSAESEAGV---QALRNEAEIRQSLNSPNI----GRNGEKTVN-IFMEY 52
+N+ T VK + + V + ++ E I + LN N+ G E + +F+EY
Sbjct: 25 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 84
Query: 53 MAGGSLLDV-----------AEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGS 101
+GG L D A++F L AGV+ LHG GI H D+K N+LL
Sbjct: 85 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV------YLHGIGITHRDIKPENLLLDE 138
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-RNEGLDFATDIWSLGC 160
++K+ D G A + N ++ + GT ++APE+L R E D+WS G
Sbjct: 139 RDNLKISDFGLA----TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 194
Query: 161 MVIEMATGRPPW 172
++ M G PW
Sbjct: 195 VLTAMLAGELPW 206
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 1 MNKGTGALFVVKSAESEAGV---QALRNEAEIRQSLNSPNI----GRNGEKTVN-IFMEY 52
+N+ T VK + + V + ++ E I + LN N+ G E + +F+EY
Sbjct: 26 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 53 MAGGSLLDV-----------AEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGS 101
+GG L D A++F L AGV+ LHG GI H D+K N+LL
Sbjct: 86 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV------YLHGIGITHRDIKPENLLLDE 139
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-RNEGLDFATDIWSLGC 160
++K+ D G A + N ++ + GT ++APE+L R E D+WS G
Sbjct: 140 RDNLKISDFGLA----TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 161 MVIEMATGRPPW 172
++ M G PW
Sbjct: 196 VLTAMLAGELPW 207
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 1 MNKGTGALFVVKSAESEAGV---QALRNEAEIRQSLNSPNI----GRNGEKTVN-IFMEY 52
+N+ T VK + + V + ++ E I + LN N+ G E + +F+EY
Sbjct: 27 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 53 MAGGSLLDV-----------AEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGS 101
+GG L D A++F L AGV+ LHG GI H D+K N+LL
Sbjct: 87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV------YLHGIGITHRDIKPENLLLDE 140
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-RNEGLDFATDIWSLGC 160
++K+ D G A + N ++ + GT ++APE+L R E D+WS G
Sbjct: 141 RDNLKISDFGLA----TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 161 MVIEMATGRPPW 172
++ M G PW
Sbjct: 197 VLTAMLAGELPW 208
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 76/176 (43%), Gaps = 23/176 (13%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR------NGEKTVNIFMEYMAGGSLLDVAEK 64
VK +++A QA EA + L N+ + + + I EYMA GSL+D
Sbjct: 34 VKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS 93
Query: 65 FGGTLDAGVIRLY-------TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN 117
G ++ G L E L GN +H DL NVL+ K+ D G + +
Sbjct: 94 RGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 153
Query: 118 DLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPW 172
++ G L W APE LR + +D+WS G ++ E+ + GR P+
Sbjct: 154 STQDTGKLPVKWT---------APEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 76/176 (43%), Gaps = 23/176 (13%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR------NGEKTVNIFMEYMAGGSLLDVAEK 64
VK +++A QA EA + L N+ + + + I EYMA GSL+D
Sbjct: 49 VKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS 108
Query: 65 FGGTLDAGVIRLY-------TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN 117
G ++ G L E L GN +H DL NVL+ K+ D G + +
Sbjct: 109 RGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168
Query: 118 DLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPW 172
++ G L W APE LR + +D+WS G ++ E+ + GR P+
Sbjct: 169 STQDTGKLPVKWT---------APEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 215
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 1 MNKGTGALFVVKSAESEAGV---QALRNEAEIRQSLNSPNI----GRNGEKTVN-IFMEY 52
+N+ T VK + + V + ++ E I + LN N+ G E + +F+EY
Sbjct: 26 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 53 MAGGSLLDV-----------AEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGS 101
+GG L D A++F L AGV+ LHG GI H D+K N+LL
Sbjct: 86 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV------YLHGIGITHRDIKPENLLLDE 139
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-RNEGLDFATDIWSLGC 160
++K+ D G A + N ++ + GT ++APE+L R E D+WS G
Sbjct: 140 RDNLKISDFGLAT----VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 161 MVIEMATGRPPW 172
++ M G PW
Sbjct: 196 VLTAMLAGELPW 207
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN-DLKNNGNLKQSWQSIGGTQLWMA 140
+H +LH DLK +N+LL + D+K+ D G AR + D + G L + T+ + A
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY----VATRWYRA 195
Query: 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDK-----------------------I 176
PE++ N +G + DIWS+GC++ EM + RP + K I
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXI 255
Query: 177 SNAAA--TLLKIACSNEKP---HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
N A LL + N+ P FP K LD L K L P KR E+ L H ++
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 114/250 (45%), Gaps = 27/250 (10%)
Query: 2 NKGTGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGRNGE-----KTVNIFMEYMAGG 56
KGT + +K + + +R E + L+ PNI + E +++ +E + GG
Sbjct: 74 QKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGG 133
Query: 57 SLLD-VAEK-FGGTLDAG-VIRLYTKEI--LHGNGILHCDLKCNNVLLGS---HGDVKLP 108
L D + EK + DA ++ + + LH NGI+H DLK N+L + +K+
Sbjct: 134 ELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIA 193
Query: 109 DLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATG 168
D G ++ V + +++ GT + APE+LR D+WS+G + + G
Sbjct: 194 DFGLSKIVEH-------QVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
Query: 169 RPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVL----DFLAKCLERKPEKRWSAEEL 224
P+ D+ + + C +F + ++ +V D + K + P+KR + +
Sbjct: 247 FEPFYDERGDQFMFRRILNCEY---YFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQA 303
Query: 225 LNHTFISGNA 234
L H +++G A
Sbjct: 304 LQHPWVTGKA 313
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 1 MNKGTGALFVVKSAESEAGV---QALRNEAEIRQSLNSPNI----GRNGEKTVN-IFMEY 52
+N+ T VK + + V + ++ E I + LN N+ G E + +F+EY
Sbjct: 26 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 53 MAGGSLLDV-----------AEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGS 101
+GG L D A++F L AGV+ LHG GI H D+K N+LL
Sbjct: 86 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV------YLHGIGITHRDIKPENLLLDE 139
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-RNEGLDFATDIWSLGC 160
++K+ D G A + N ++ + GT ++APE+L R E D+WS G
Sbjct: 140 RDNLKISDFGLAT----VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 161 MVIEMATGRPPW 172
++ M G PW
Sbjct: 196 VLTAMLAGELPW 207
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 1 MNKGTGALFVVKSAESEAGV---QALRNEAEIRQSLNSPNI----GRNGEKTVN-IFMEY 52
+N+ T VK + + V + ++ E I + LN N+ G E + +F+EY
Sbjct: 26 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 53 MAGGSLLDV-----------AEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGS 101
+GG L D A++F L AGV+ LHG GI H D+K N+LL
Sbjct: 86 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV------YLHGIGITHRDIKPENLLLDE 139
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-RNEGLDFATDIWSLGC 160
++K+ D G A + N ++ + GT ++APE+L R E D+WS G
Sbjct: 140 RDNLKISDFGLAT----VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 161 MVIEMATGRPPW 172
++ M G PW
Sbjct: 196 VLTAMLAGELPW 207
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 1 MNKGTGALFVVKSAESEAGV---QALRNEAEIRQSLNSPNI----GRNGEKTVN-IFMEY 52
+N+ T VK + + V + ++ E I + LN N+ G E + +F+EY
Sbjct: 27 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 53 MAGGSLLDV-----------AEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGS 101
+GG L D A++F L AGV+ LHG GI H D+K N+LL
Sbjct: 87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV------YLHGIGITHRDIKPENLLLDE 140
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-RNEGLDFATDIWSLGC 160
++K+ D G A + N ++ + GT ++APE+L R E D+WS G
Sbjct: 141 RDNLKISDFGLAT----VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 161 MVIEMATGRPPW 172
++ M G PW
Sbjct: 197 VLTAMLAGELPW 208
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN-DLKNNGNLKQSWQSIGGTQLWMA 140
+H +LH DLK +N+LL + D+K+ D G AR + D + G L + T+ + A
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY----VATRWYRA 199
Query: 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDK-----------------------I 176
PE++ N +G + DIWS+GC++ EM + RP + K I
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 177 SNAAA--TLLKIACSNEKP---HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
N A LL + N+ P FP K LD L K L P KR E+ L H ++
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 108/241 (44%), Gaps = 30/241 (12%)
Query: 12 KSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLD--VAEK 64
K+ + +Q L E I + LN PNI + EKT+ + MEY +GG + D VA
Sbjct: 50 KTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH- 108
Query: 65 FGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVND 118
G + R ++I+ H I+H DLK N+LL + ++K+ D G + N+
Sbjct: 109 --GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS---NE 163
Query: 119 LKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFA-TDIWSLGCMVIEMATGRPPW-GDKI 176
G L + G + APE+ + + D D+WSLG ++ + +G P+ G +
Sbjct: 164 FTVGGKL----DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 219
Query: 177 SNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKK 236
+L+ K P + L + L P KR + E+++ +I+ ++
Sbjct: 220 KELRERVLR-----GKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEE 274
Query: 237 N 237
+
Sbjct: 275 D 275
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 1 MNKGTGALFVVKSAESEAGV---QALRNEAEIRQSLNSPNI----GRNGEKTVN-IFMEY 52
+N+ T VK + + V + ++ E I + LN N+ G E + +F+EY
Sbjct: 26 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 53 MAGGSLLDV-----------AEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGS 101
+GG L D A++F L AGV+ LHG GI H D+K N+LL
Sbjct: 86 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV------YLHGIGITHRDIKPENLLLDE 139
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-RNEGLDFATDIWSLGC 160
++K+ D G A + N ++ + GT ++APE+L R E D+WS G
Sbjct: 140 RDNLKISDFGLAT----VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 161 MVIEMATGRPPW 172
++ M G PW
Sbjct: 196 VLTAMLAGELPW 207
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 23/176 (13%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR------NGEKTVNIFMEYMAGGSLLDVAEK 64
VK +++A QA EA + L N+ + + + I EYMA GSL+D
Sbjct: 40 VKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS 99
Query: 65 FGGTLDAGVIRLY-------TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN 117
G ++ G L E L GN +H DL NVL+ K+ D G + +
Sbjct: 100 RGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 159
Query: 118 DLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPW 172
++ G L W APE LR +D+WS G ++ E+ + GR P+
Sbjct: 160 STQDTGKLPVKWT---------APEALREAAFSTKSDVWSFGILLWEIYSFGRVPY 206
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN-DLKNNGNLKQSWQSIGGTQLWMA 140
+H +LH DLK +N+LL + D+K+ D G AR + D + G L + T+ + A
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY----VATRWYRA 195
Query: 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDK-----------------------I 176
PE++ N +G + DIWS+GC++ EM + RP + K I
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 255
Query: 177 SNAAA--TLLKIACSNEKP---HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
N A LL + N+ P FP K LD L K L P KR E+ L H ++
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN-DLKNNGNLKQSWQSIGGTQLWMA 140
+H +LH DLK +N+LL + D+K+ D G AR + D + G L + T+ + A
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY----VATRWYRA 199
Query: 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDK-----------------------I 176
PE++ N +G + DIWS+GC++ EM + RP + K I
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 177 SNAAA--TLLKIACSNEKP---HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
N A LL + N+ P FP K LD L K L P KR E+ L H ++
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 83/180 (46%), Gaps = 35/180 (19%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN-DLKNNGNLKQSWQSIGGTQLWMA 140
+H +LH DLK +N+LL + D+K+ D G AR + D + G L + T+ + A
Sbjct: 142 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY----VATRWYRA 197
Query: 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDK-----------------------I 176
PE++ N +G + DIWS+GC++ EM + RP + K I
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 257
Query: 177 SNAAA--TLLKIACSNEKP---HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFIS 231
N A LL + N+ P FP K LD L K L P KR E+ L H +++
Sbjct: 258 INLKARNYLLSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYLA 316
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN-DLKNNGNLKQSWQSIGGTQLWMA 140
+H +LH DLK +N+LL + D+K+ D G AR + D + G L + T+ + A
Sbjct: 160 IHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV----ATRWYRA 215
Query: 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDK-----------------------I 176
PE++ N +G + DIWS+GC++ EM + RP + K I
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 275
Query: 177 SNAAA--TLLKIACSNEKP---HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
N A LL + N+ P FP K LD L K L P KR E+ L H ++
Sbjct: 276 INLKARNYLLSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYL 333
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 100/253 (39%), Gaps = 39/253 (15%)
Query: 5 TGALFVVKSAESEAG---VQALRNEAEIRQSLNSPNIGR-------NGEKTVNIFMEYMA 54
TG VKS + E+G + L+ E EI ++L NI + +G + + ME++
Sbjct: 49 TGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLP 108
Query: 55 GGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLP 108
GSL + K ++ Y +I G L H DL NVL+ S VK+
Sbjct: 109 SGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIG 168
Query: 109 DLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATG 168
D G + + K +K S W APE L A+D+WS G + E+ T
Sbjct: 169 DFGLTKAIETDKEXXTVKDDRDS---PVFWYAPECLMQSKFYIASDVWSFGVTLHELLT- 224
Query: 169 RPPWGDKISNAAATLLKIACSN----------------EKPHFPTQFFKKVLDFLAKCLE 212
+ D S+ A LK+ ++ P +V + KC E
Sbjct: 225 ---YCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWE 281
Query: 213 RKPEKRWSAEELL 225
+P R S + L+
Sbjct: 282 FQPSNRTSFQNLI 294
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 1 MNKGTGALFVVKSAESEAGV---QALRNEAEIRQSLNSPNI----GRNGEKTVN-IFMEY 52
+N+ T VK + + V + ++ E I + LN N+ G E + +F+EY
Sbjct: 27 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 53 MAGGSLLDV-----------AEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGS 101
+GG L D A++F L AGV+ LHG GI H D+K N+LL
Sbjct: 87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV------YLHGIGITHRDIKPENLLLDE 140
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-RNEGLDFATDIWSLGC 160
++K+ D G A + N ++ + GT ++APE+L R E D+WS G
Sbjct: 141 RDNLKISDFGLA----TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 161 MVIEMATGRPPW 172
++ M G PW
Sbjct: 197 VLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 1 MNKGTGALFVVKSAESEAGV---QALRNEAEIRQSLNSPNI----GRNGEKTVN-IFMEY 52
+N+ T VK + + V + ++ E I + LN N+ G E + +F+EY
Sbjct: 27 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 53 MAGGSLLDV-----------AEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGS 101
+GG L D A++F L AGV+ LHG GI H D+K N+LL
Sbjct: 87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV------YLHGIGITHRDIKPENLLLDE 140
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-RNEGLDFATDIWSLGC 160
++K+ D G A + N ++ + GT ++APE+L R E D+WS G
Sbjct: 141 RDNLKISDFGLA----TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 161 MVIEMATGRPPW 172
++ M G PW
Sbjct: 197 VLTAMLAGELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 1 MNKGTGALFVVKSAESEAGV---QALRNEAEIRQSLNSPNI----GRNGEKTVN-IFMEY 52
+N+ T VK + + V + ++ E I + LN N+ G E + +F+EY
Sbjct: 27 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 53 MAGGSLLDV-----------AEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGS 101
+GG L D A++F L AGV+ LHG GI H D+K N+LL
Sbjct: 87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV------YLHGIGITHRDIKPENLLLDE 140
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-RNEGLDFATDIWSLGC 160
++K+ D G A + N ++ + GT ++APE+L R E D+WS G
Sbjct: 141 RDNLKISDFGLA----TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 161 MVIEMATGRPPW 172
++ M G PW
Sbjct: 197 VLTAMLAGELPW 208
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 100/253 (39%), Gaps = 39/253 (15%)
Query: 5 TGALFVVKSAESEAG---VQALRNEAEIRQSLNSPNIGR-------NGEKTVNIFMEYMA 54
TG VKS + E+G + L+ E EI ++L NI + +G + + ME++
Sbjct: 37 TGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLP 96
Query: 55 GGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLP 108
GSL + K ++ Y +I G L H DL NVL+ S VK+
Sbjct: 97 SGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIG 156
Query: 109 DLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATG 168
D G + + K +K S W APE L A+D+WS G + E+ T
Sbjct: 157 DFGLTKAIETDKEXXTVKDDRDS---PVFWYAPECLMQSKFYIASDVWSFGVTLHELLT- 212
Query: 169 RPPWGDKISNAAATLLKIACSN----------------EKPHFPTQFFKKVLDFLAKCLE 212
+ D S+ A LK+ ++ P +V + KC E
Sbjct: 213 ---YCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWE 269
Query: 213 RKPEKRWSAEELL 225
+P R S + L+
Sbjct: 270 FQPSNRTSFQNLI 282
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 1 MNKGTGALFVVKSAESEAGV---QALRNEAEIRQSLNSPNI----GRNGEKTVN-IFMEY 52
+N+ T VK + + V + ++ E I + LN N+ G E + +F+EY
Sbjct: 26 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 53 MAGGSLLDV-----------AEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGS 101
+GG L D A++F L AGV+ LHG GI H D+K N+LL
Sbjct: 86 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV------YLHGIGITHRDIKPENLLLDE 139
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-RNEGLDFATDIWSLGC 160
++K+ D G A + N ++ + GT ++APE+L R E D+WS G
Sbjct: 140 RDNLKISDFGLA----TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 161 MVIEMATGRPPW 172
++ M G PW
Sbjct: 196 VLTAMLAGELPW 207
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 103/235 (43%), Gaps = 32/235 (13%)
Query: 3 KGTGALFVVKSAESEAGVQ-----ALRNEAEIRQSLNSPNIGRNGE---KTVN---IFME 51
KGT L+ +K + + +Q E + L+ P +TV+ ME
Sbjct: 41 KGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVME 100
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDV 105
Y+ GG L+ ++ G + + Y EI LH GI++ DLK +NV+L S G +
Sbjct: 101 YVNGGDLMYHIQQVGKFKEPQAV-FYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHI 159
Query: 106 KLPDLG-CARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIE 164
K+ D G C + D + + GT ++APE++ + + D W+ G ++ E
Sbjct: 160 KIADFGMCKEHMMD-------GVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYE 212
Query: 165 MATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
M G+PP+ G+ ++++ S +P K+ + + + P KR
Sbjct: 213 MLAGQPPFDGEDEDELFQSIMEHNVS-----YPKSLSKEAVSICKGLMTKHPAKR 262
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 34/198 (17%)
Query: 50 MEYMAGGSLL-----------DVAEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVL 98
MEY GG L + A +G + + + E LH +++ D+K N++
Sbjct: 87 MEYANGGELFFHLSRERVFTEERARFYGAEIVSAL------EYLHSRDVVYRDIKLENLM 140
Query: 99 LGSHGDVKLPDLG-CARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWS 157
L G +K+ D G C ++D + ++ GT ++APEVL + A D W
Sbjct: 141 LDKDGHIKITDFGLCKEGISD-------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG 193
Query: 158 LGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEK 217
LG ++ EM GR P+ ++ L+ + E+ FP + LA L++ P++
Sbjct: 194 LGVVMYEMMCGRLPFYNQDHERLFELILM----EEIRFPRTLSPEAKSLLAGLLKKDPKQ 249
Query: 218 RW-----SAEELLNHTFI 230
R A+E++ H F
Sbjct: 250 RLGGGPSDAKEVMEHRFF 267
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 1 MNKGTGALFVVKSAESEAGV---QALRNEAEIRQSLNSPNI----GRNGEKTVN-IFMEY 52
+N+ T VK + + V + ++ E I + LN N+ G E + +F+EY
Sbjct: 27 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 53 MAGGSLLDV-----------AEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGS 101
+GG L D A++F L AGV+ LHG GI H D+K N+LL
Sbjct: 87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV------YLHGIGITHRDIKPENLLLDE 140
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-RNEGLDFATDIWSLGC 160
++K+ D G A + N ++ + GT ++APE+L R E D+WS G
Sbjct: 141 RDNLKISDFGLA----TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 161 MVIEMATGRPPW 172
++ M G PW
Sbjct: 197 VLTAMLAGELPW 208
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 34/198 (17%)
Query: 50 MEYMAGGSLL-----------DVAEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVL 98
MEY GG L + A +G + + + E LH +++ D+K N++
Sbjct: 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSAL------EYLHSRDVVYRDIKLENLM 137
Query: 99 LGSHGDVKLPDLG-CARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWS 157
L G +K+ D G C ++D + ++ GT ++APEVL + A D W
Sbjct: 138 LDKDGHIKITDFGLCKEGISD-------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG 190
Query: 158 LGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEK 217
LG ++ EM GR P+ ++ L+ + E+ FP + LA L++ P++
Sbjct: 191 LGVVMYEMMCGRLPFYNQDHERLFELILM----EEIRFPRTLSPEAKSLLAGLLKKDPKQ 246
Query: 218 RW-----SAEELLNHTFI 230
R A+E++ H F
Sbjct: 247 RLGGGPSDAKEVMEHRFF 264
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 34/168 (20%)
Query: 26 EAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL------DVAEKFGGTLDAGVI 74
E +I NSP + + ++ + + MEYM GG L+ DV EK+
Sbjct: 119 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWA-------- 170
Query: 75 RLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQS 128
R YT E+ +H G +H D+K +N+LL G +KL D G ++N G ++
Sbjct: 171 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN---KEGMVR-- 225
Query: 129 WQSIGGTQLWMAPEVLRNEGLD----FATDIWSLGCMVIEMATGRPPW 172
+ GT +++PEVL+++G D D WS+G + EM G P+
Sbjct: 226 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 31/199 (15%)
Query: 50 MEYMAGGSLL-----------DVAEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVL 98
MEY GG L D A +G + + + L++++ +++ DLK N++
Sbjct: 87 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK-----NVVYRDLKLENLM 141
Query: 99 LGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSL 158
L G +K+ D G + +K+ +K GT ++APEVL + A D W L
Sbjct: 142 LDKDGHIKITDFGLCK--EGIKDGATMK----XFCGTPEYLAPEVLEDNDYGRAVDWWGL 195
Query: 159 GCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
G ++ EM GR P+ ++ L+ + E+ FP + L+ L++ P++R
Sbjct: 196 GVVMYEMMCGRLPFYNQDHEKLFELILM----EEIRFPRTLGPEAKSLLSGLLKKDPKQR 251
Query: 219 W-----SAEELLNHTFISG 232
A+E++ H F +G
Sbjct: 252 LGGGSEDAKEIMQHRFFAG 270
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 31/199 (15%)
Query: 50 MEYMAGGSLL-----------DVAEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVL 98
MEY GG L D A +G + + + L++++ +++ DLK N++
Sbjct: 88 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK-----NVVYRDLKLENLM 142
Query: 99 LGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSL 158
L G +K+ D G + +K+ +K GT ++APEVL + A D W L
Sbjct: 143 LDKDGHIKITDFGLCK--EGIKDGATMK----XFCGTPEYLAPEVLEDNDYGRAVDWWGL 196
Query: 159 GCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
G ++ EM GR P+ ++ L+ + E+ FP + L+ L++ P++R
Sbjct: 197 GVVMYEMMCGRLPFYNQDHEKLFELILM----EEIRFPRTLGPEAKSLLSGLLKKDPKQR 252
Query: 219 W-----SAEELLNHTFISG 232
A+E++ H F +G
Sbjct: 253 LGGGSEDAKEIMQHRFFAG 271
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 34/168 (20%)
Query: 26 EAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL------DVAEKFGGTLDAGVI 74
E +I NSP + + ++ + + MEYM GG L+ DV EK+
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWA-------- 175
Query: 75 RLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQS 128
R YT E+ +H G +H D+K +N+LL G +KL D G ++N G ++
Sbjct: 176 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN---KEGMVR-- 230
Query: 129 WQSIGGTQLWMAPEVLRNEGLD----FATDIWSLGCMVIEMATGRPPW 172
+ GT +++PEVL+++G D D WS+G + EM G P+
Sbjct: 231 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 34/198 (17%)
Query: 50 MEYMAGGSLL-----------DVAEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVL 98
MEY GG L + A +G + + + E LH +++ D+K N++
Sbjct: 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSAL------EYLHSRDVVYRDIKLENLM 137
Query: 99 LGSHGDVKLPDLG-CARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWS 157
L G +K+ D G C ++D + ++ GT ++APEVL + A D W
Sbjct: 138 LDKDGHIKITDFGLCKEGISD-------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG 190
Query: 158 LGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEK 217
LG ++ EM GR P+ ++ L+ + E+ FP + LA L++ P++
Sbjct: 191 LGVVMYEMMCGRLPFYNQDHERLFELILM----EEIRFPRTLSPEAKSLLAGLLKKDPKQ 246
Query: 218 RW-----SAEELLNHTFI 230
R A+E++ H F
Sbjct: 247 RLGGGPSDAKEVMEHRFF 264
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 22/232 (9%)
Query: 15 ESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEK---FG 66
E E LR E EI+ L+ PNI R + + + +EY G L +K F
Sbjct: 62 EKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFD 121
Query: 67 GTLDAGVIRLYTKEIL--HGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGN 124
A ++ ++ HG ++H D+K N+LLG G++K+ D G + L+
Sbjct: 122 EQRTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRR--- 178
Query: 125 LKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLL 184
+++ GT ++ PE++ + D+W +G + E+ G PP+ N T
Sbjct: 179 -----KTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHN--ETYR 231
Query: 185 KIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKK 236
+I + K FP D ++K L P +R ++ H ++ N+++
Sbjct: 232 RIVKVDLK--FPASVPTGAQDLISKLLRHNPSERLPLAQVSAHPWVRANSRR 281
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 31/199 (15%)
Query: 50 MEYMAGGSLL-----------DVAEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVL 98
MEY GG L D A +G + + + L++++ +++ DLK N++
Sbjct: 89 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK-----NVVYRDLKLENLM 143
Query: 99 LGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSL 158
L G +K+ D G + +K+ +K GT ++APEVL + A D W L
Sbjct: 144 LDKDGHIKITDFGLCK--EGIKDGATMK----XFCGTPEYLAPEVLEDNDYGRAVDWWGL 197
Query: 159 GCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
G ++ EM GR P+ ++ L+ + E+ FP + L+ L++ P++R
Sbjct: 198 GVVMYEMMCGRLPFYNQDHEKLFELILM----EEIRFPRTLGPEAKSLLSGLLKKDPKQR 253
Query: 219 W-----SAEELLNHTFISG 232
A+E++ H F +G
Sbjct: 254 LGGGSEDAKEIMQHRFFAG 272
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN-DLKNNGNLKQSWQSIGGTQLWMA 140
+H +LH DLK +N+LL + D+K+ D G AR + D + G L + T+ + A
Sbjct: 142 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY----VATRWYRA 197
Query: 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDK-----------------------I 176
PE++ N +G + DIWS+GC++ EM + RP + K I
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 257
Query: 177 SNAAA--TLLKIACSNEKP---HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
N A LL + N+ P FP K LD L K L P KR E+ L H ++
Sbjct: 258 INLKARNYLLSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 100/247 (40%), Gaps = 28/247 (11%)
Query: 2 NKGTGALFVVKS--AESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMA 54
++ TG + V+K E + E ++ + L PN+ + +K +N EY+
Sbjct: 31 HRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIK 90
Query: 55 GGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLP 108
GG+L + + + K+I LH I+H DL +N L+ + +V +
Sbjct: 91 GGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVA 150
Query: 109 DLGCARRVNDLKNNGNLKQSWQ--------SIGGTQLWMAPEVLRNEGLDFATDIWSLG- 159
D G AR + D K +S + ++ G WMAPE++ D D++S G
Sbjct: 151 DFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGI 210
Query: 160 --CMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEK 217
C +I P + + + + P+ P FF +C + PEK
Sbjct: 211 VLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFP----ITVRCCDLDPEK 266
Query: 218 RWSAEEL 224
R S +L
Sbjct: 267 RPSFVKL 273
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN-DLKNNGNLKQSWQSIGGTQLWMA 140
+H +LH DLK +N+LL + D+K+ D G AR + D + G L + T+ + A
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY----VATRWYRA 195
Query: 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDK-----------------------I 176
PE++ N +G + DIWS+GC++ EM + RP + K I
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 255
Query: 177 SNAAA--TLLKIACSNEKP---HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
N A LL + N+ P FP K LD L K L P KR E+ L H ++
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 34/168 (20%)
Query: 26 EAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL------DVAEKFGGTLDAGVI 74
E +I NSP + + ++ + + MEYM GG L+ DV EK+
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWA-------- 175
Query: 75 RLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQS 128
R YT E+ +H G +H D+K +N+LL G +KL D G ++N G ++
Sbjct: 176 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN---KEGMVR-- 230
Query: 129 WQSIGGTQLWMAPEVLRNEGLD----FATDIWSLGCMVIEMATGRPPW 172
+ GT +++PEVL+++G D D WS+G + EM G P+
Sbjct: 231 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN-DLKNNGNLKQSWQSIGGTQLWMA 140
+H +LH DLK +N+LL + D+K+ D G AR + D + G L + T+ + A
Sbjct: 160 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV----ATRWYRA 215
Query: 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDK-----------------------I 176
PE++ N +G + DIWS+GC++ EM + RP + K I
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 275
Query: 177 SNAAA--TLLKIACSNEKP---HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
N A LL + N+ P FP K LD L K L P KR E+ L H ++
Sbjct: 276 INLKARNYLLSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYL 333
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN-DLKNNGNLKQSWQSIGGTQLWMA 140
+H +LH DLK +N+LL + D+K+ D G AR + D + G L + T+ + A
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEX----VATRWYRA 199
Query: 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDK-----------------------I 176
PE++ N +G + DIWS+GC++ EM + RP + K I
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 177 SNAAA--TLLKIACSNEKP---HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
N A LL + N+ P FP K LD L K L P KR E+ L H ++
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN-DLKNNGNLKQSWQSIGGTQLWMA 140
+H +LH DLK +N+LL + D+K+ D G AR + D + G L + T+ + A
Sbjct: 145 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEX----VATRWYRA 200
Query: 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDK-----------------------I 176
PE++ N +G + DIWS+GC++ EM + RP + K I
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 260
Query: 177 SNAAA--TLLKIACSNEKP---HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
N A LL + N+ P FP K LD L K L P KR E+ L H ++
Sbjct: 261 INLKARNYLLSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYL 318
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN-DLKNNGNLKQSWQSIGGTQLWMA 140
+H +LH DLK +N+LL + D+K+ D G AR + D + G L + T+ + A
Sbjct: 145 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY----VATRWYRA 200
Query: 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDK-----------------------I 176
PE++ N +G + DIWS+GC++ EM + RP + K I
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 260
Query: 177 SNAAA--TLLKIACSNEKP---HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
N A LL + N+ P FP K LD L K L P KR E+ L H ++
Sbjct: 261 INLKARNYLLSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYL 318
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN-DLKNNGNLKQSWQSIGGTQLWMA 140
+H +LH DLK +N+LL + D+K+ D G AR + D + G L + T+ + A
Sbjct: 146 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY----VATRWYRA 201
Query: 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDK-----------------------I 176
PE++ N +G + DIWS+GC++ EM + RP + K I
Sbjct: 202 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 261
Query: 177 SNAAA--TLLKIACSNEKP---HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
N A LL + N+ P FP K LD L K L P KR E+ L H ++
Sbjct: 262 INLKARNYLLSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYL 319
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN-DLKNNGNLKQSWQSIGGTQLWMA 140
+H +LH DLK +N+LL + D+K+ D G AR + D + G L + T+ + A
Sbjct: 137 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY----VATRWYRA 192
Query: 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDK-----------------------I 176
PE++ N +G + DIWS+GC++ EM + RP + K I
Sbjct: 193 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 252
Query: 177 SNAAA--TLLKIACSNEKP---HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
N A LL + N+ P FP K LD L K L P KR E+ L H ++
Sbjct: 253 INLKARNYLLSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYL 310
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN-DLKNNGNLKQSWQSIGGTQLWMA 140
+H +LH DLK +N+LL + D+K+ D G AR + D + G L + T+ + A
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY----VATRWYRA 199
Query: 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDK-----------------------I 176
PE++ N +G + DIWS+GC++ EM + RP + K I
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 177 SNAAA--TLLKIACSNEKP---HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
N A LL + N+ P FP K LD L K L P KR E+ L H ++
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN-DLKNNGNLKQSWQSIGGTQLWMA 140
+H +LH DLK +N+LL + D+K+ D G AR + D + G L + T+ + A
Sbjct: 148 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV----ATRWYRA 203
Query: 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDK-----------------------I 176
PE++ N +G + DIWS+GC++ EM + RP + K I
Sbjct: 204 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 263
Query: 177 SNAAA--TLLKIACSNEKP---HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
N A LL + N+ P FP K LD L K L P KR E+ L H ++
Sbjct: 264 INLKARNYLLSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYL 321
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN-DLKNNGNLKQSWQSIGGTQLWMA 140
+H +LH DLK +N+LL + D+K+ D G AR + D + G L + T+ + A
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV----ATRWYRA 195
Query: 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDK-----------------------I 176
PE++ N +G + DIWS+GC++ EM + RP + K I
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 255
Query: 177 SNAAA--TLLKIACSNEKP---HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
N A LL + N+ P FP K LD L K L P KR E+ L H ++
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 87/192 (45%), Gaps = 30/192 (15%)
Query: 1 MNKGTGALFVVKSAESEAGV---QALRNEAEIRQSLNSPNI----GRNGEKTVN-IFMEY 52
+N+ T VK + + V + ++ E I LN N+ G E + +F+EY
Sbjct: 27 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 53 MAGGSLLDV-----------AEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGS 101
+GG L D A++F L AGV+ LHG GI H D+K N+LL
Sbjct: 87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV------YLHGIGITHRDIKPENLLLDE 140
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-RNEGLDFATDIWSLGC 160
++K+ D G A + N ++ + GT ++APE+L R E D+WS G
Sbjct: 141 RDNLKISDFGLAT----VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 161 MVIEMATGRPPW 172
++ M G PW
Sbjct: 197 VLTAMLAGELPW 208
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN-DLKNNGNLKQSWQSIGGTQLWMA 140
+H +LH DLK +N+LL + D+K+ D G AR + D + G L + T+ + A
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY----VATRWYRA 199
Query: 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDK-----------------------I 176
PE++ N +G + DIWS+GC++ EM + RP + K I
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 177 SNAAA--TLLKIACSNEKP---HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
N A LL + N+ P FP K LD L K L P KR E+ L H ++
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN-DLKNNGNLKQSWQSIGGTQLWMA 140
+H +LH DLK +N+LL + D+K+ D G AR + D + G L + T+ + A
Sbjct: 138 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY----VATRWYRA 193
Query: 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDK-----------------------I 176
PE++ N +G + DIWS+GC++ EM + RP + K I
Sbjct: 194 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 253
Query: 177 SNAAA--TLLKIACSNEKP---HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
N A LL + N+ P FP K LD L K L P KR E+ L H ++
Sbjct: 254 INLKARNYLLSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYL 311
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 33/195 (16%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQS----IGGT 135
++LHG+ ++H DLK +N+L+ S+ D+K+ D G AR +++ + + QS T
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVAT 185
Query: 136 QLWMAPEV-LRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLL---------- 184
+ + APEV L + A D+WS GC++ E+ RP + + L+
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245
Query: 185 -KIACSNEK---------PHFPT----QFFKKV----LDFLAKCLERKPEKRWSAEELLN 226
+ C P +P + F +V +D L + L P KR +A+E L
Sbjct: 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305
Query: 227 HTFISGNAKKNSTEE 241
H ++ N E
Sbjct: 306 HPYLQTYHDPNDEPE 320
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN-DLKNNGNLKQSWQSIGGTQLWMA 140
+H +LH DLK +N+LL + D+K+ D G AR + D + G L + T+ + A
Sbjct: 138 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY----VATRWYRA 193
Query: 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDK-----------------------I 176
PE++ N +G + DIWS+GC++ EM + RP + K I
Sbjct: 194 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCI 253
Query: 177 SNAAA--TLLKIACSNEKP---HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
N A LL + N+ P FP K LD L K L P KR E+ L H ++
Sbjct: 254 INLKARNYLLSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYL 311
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN-DLKNNGNLKQSWQSIGGTQLWMA 140
+H +LH DLK +N+LL + D+K+ D G AR + D + G L + T+ + A
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY----VATRWYRA 199
Query: 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDK-----------------------I 176
PE++ N +G + DIWS+GC++ EM + RP + K I
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 177 SNAAA--TLLKIACSNEKP---HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
N A LL + N+ P FP K LD L K L P KR E+ L H ++
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWM 139
+ LH + ++H DLK N+L+ S G +KL D G AR + + + S+ T +
Sbjct: 134 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY-------SFQMALTSVVVTLWYR 186
Query: 140 APEVLRNEGLDFATDIWSLGCMVIEMATGRPPW--GDKISNAAATLLKIACSNEK--PH- 194
APEVL D+WS+GC+ EM +P + + L I E+ P
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 246
Query: 195 --FPTQFF--------KKVL--------DFLAKCLERKPEKRWSAEELLNHTFI 230
P Q F +K + D L KCL P KR SA L+H +
Sbjct: 247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 28/231 (12%)
Query: 20 VQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI 74
V +R E + + P+I + + + + MEY++GG L D K G LD
Sbjct: 60 VGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICK-NGRLDEKES 118
Query: 75 RLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQS 128
R ++IL H + ++H DLK NVLL +H + K+ D G + N + + L+ S
Sbjct: 119 RRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS---NMMSDGEFLRXS 175
Query: 129 WQSIGGTQLWMAPEVLRNEGLDFA---TDIWSLGCMVIEMATGRPPWGDKISNAAATLLK 185
G+ + APEV+ G +A DIWS G ++ + G P+ D + TL K
Sbjct: 176 C----GSPNYAAPEVI--SGRLYAGPEVDIWSSGVILYALLCGTLPFDD---DHVPTLFK 226
Query: 186 IACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKK 236
C + P V+ L L+ P KR + +++ H + + K
Sbjct: 227 KICDGIF-YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPK 276
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 33/195 (16%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQS----IGGT 135
++LHG+ ++H DLK +N+L+ S+ D+K+ D G AR +++ + + QS T
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVAT 185
Query: 136 QLWMAPEV-LRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLL---------- 184
+ + APEV L + A D+WS GC++ E+ RP + + L+
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245
Query: 185 -KIACSNEK---------PHFPT----QFFKKV----LDFLAKCLERKPEKRWSAEELLN 226
+ C P +P + F +V +D L + L P KR +A+E L
Sbjct: 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305
Query: 227 HTFISGNAKKNSTEE 241
H ++ N E
Sbjct: 306 HPYLQTYHDPNDEPE 320
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 34/198 (17%)
Query: 50 MEYMAGGSLL-----------DVAEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVL 98
MEY GG L + A +G + + + E LH +++ D+K N++
Sbjct: 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSAL------EYLHSRDVVYRDIKLENLM 137
Query: 99 LGSHGDVKLPDLG-CARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWS 157
L G +K+ D G C ++D + + GT ++APEVL + A D W
Sbjct: 138 LDKDGHIKITDFGLCKEGISD-------GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 190
Query: 158 LGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEK 217
LG ++ EM GR P+ ++ L+ + E+ FP + LA L++ P++
Sbjct: 191 LGVVMYEMMCGRLPFYNQDHERLFELILM----EEIRFPRTLSPEAKSLLAGLLKKDPKQ 246
Query: 218 RW-----SAEELLNHTFI 230
R A+E++ H F
Sbjct: 247 RLGGGPSDAKEVMEHRFF 264
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 34/198 (17%)
Query: 50 MEYMAGGSLL-----------DVAEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVL 98
MEY GG L + A +G + + + E LH +++ D+K N++
Sbjct: 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSAL------EYLHSRDVVYRDIKLENLM 137
Query: 99 LGSHGDVKLPDLG-CARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWS 157
L G +K+ D G C ++D + + GT ++APEVL + A D W
Sbjct: 138 LDKDGHIKITDFGLCKEGISD-------GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 190
Query: 158 LGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEK 217
LG ++ EM GR P+ ++ L+ + E+ FP + LA L++ P++
Sbjct: 191 LGVVMYEMMCGRLPFYNQDHERLFELILM----EEIRFPRTLSPEAKSLLAGLLKKDPKQ 246
Query: 218 RW-----SAEELLNHTFI 230
R A+E++ H F
Sbjct: 247 RLGGGPSDAKEVMEHRFF 264
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWM 139
+ LH + ++H DLK N+L+ S G +KL D G AR + + + S+ T +
Sbjct: 134 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY-------SFQMALTSVVVTLWYR 186
Query: 140 APEVLRNEGLDFATDIWSLGCMVIEMATGRPPW--GDKISNAAATLLKIACSNEK--PH- 194
APEVL D+WS+GC+ EM +P + + L I E+ P
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 246
Query: 195 --FPTQFF--------KKVL--------DFLAKCLERKPEKRWSAEELLNHTFI 230
P Q F +K + D L KCL P KR SA L+H +
Sbjct: 247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 74/175 (42%), Gaps = 30/175 (17%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWM 139
+ LH + ++H DLK N+L+ S G +KL D G AR + + + S+ T +
Sbjct: 134 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY-------SFQMALTSVVVTLWYR 186
Query: 140 APEVLRNEGLDFATDIWSLGCMVIEMATGRPPW--GDKISNAAATLLKIACSNEK--PH- 194
APEVL D+WS+GC+ EM +P + + L I E+ P
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 246
Query: 195 --FPTQFF--------KKVL--------DFLAKCLERKPEKRWSAEELLNHTFIS 231
P Q F +K + D L KCL P KR SA L+H +
Sbjct: 247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 104/245 (42%), Gaps = 29/245 (11%)
Query: 12 KSAESEAGVQALRNEAEIRQSLNSPNIGRNGE-----KTVNIFMEYMAGGSLLDVA---E 63
K++ + E E+ + L+ PNI + E + I E GG L D +
Sbjct: 57 KASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK 116
Query: 64 KFGGTLDAGVIRLYTKEI--LHGNGILHCDLKCNNVLLGSHG---DVKLPDLGCARRVND 118
+F A +I+ I +H + I+H DLK N+LL S D+K+ D G +
Sbjct: 117 RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS---TC 173
Query: 119 LKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISN 178
+ N +K GT ++APEVLR D D+WS G ++ + +G PP+ K N
Sbjct: 174 FQQNTKMKDRI----GTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK--N 226
Query: 179 AAATLLKIACSNEKPHFPT--QFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKK 236
L ++ P D + K L P R +A + L H +I +K
Sbjct: 227 EYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWI----QK 282
Query: 237 NSTEE 241
S+EE
Sbjct: 283 YSSEE 287
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 33/195 (16%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQS----IGGT 135
++LHG+ ++H DLK +N+L+ S+ D+K+ D G AR +++ + + QS T
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVAT 185
Query: 136 QLWMAPEV-LRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLL---------- 184
+ + APEV L + A D+WS GC++ E+ RP + + L+
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245
Query: 185 -KIACSNEK---------PHFPT----QFFKKV----LDFLAKCLERKPEKRWSAEELLN 226
+ C P +P + F +V +D L + L P KR +A+E L
Sbjct: 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305
Query: 227 HTFISGNAKKNSTEE 241
H ++ N E
Sbjct: 306 HPYLQTYHDPNDEPE 320
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 34/198 (17%)
Query: 50 MEYMAGGSLL-----------DVAEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVL 98
MEY GG L + A +G + + + E LH +++ D+K N++
Sbjct: 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSAL------EYLHSRDVVYRDIKLENLM 137
Query: 99 LGSHGDVKLPDLG-CARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWS 157
L G +K+ D G C ++D + + GT ++APEVL + A D W
Sbjct: 138 LDKDGHIKITDFGLCKEGISD-------GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 190
Query: 158 LGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEK 217
LG ++ EM GR P+ ++ L+ + E+ FP + LA L++ P++
Sbjct: 191 LGVVMYEMMCGRLPFYNQDHERLFELILM----EEIRFPRTLSPEAKSLLAGLLKKDPKQ 246
Query: 218 RW-----SAEELLNHTFI 230
R A+E++ H F
Sbjct: 247 RLGGGPSDAKEVMEHRFF 264
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 34/198 (17%)
Query: 50 MEYMAGGSLL-----------DVAEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVL 98
MEY GG L + A +G + + + E LH +++ D+K N++
Sbjct: 89 MEYANGGELFFHLSRERVFTEERARFYGAEIVSAL------EYLHSRDVVYRDIKLENLM 142
Query: 99 LGSHGDVKLPDLG-CARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWS 157
L G +K+ D G C ++D + + GT ++APEVL + A D W
Sbjct: 143 LDKDGHIKITDFGLCKEGISD-------GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 195
Query: 158 LGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEK 217
LG ++ EM GR P+ ++ L+ + E+ FP + LA L++ P++
Sbjct: 196 LGVVMYEMMCGRLPFYNQDHERLFELILM----EEIRFPRTLSPEAKSLLAGLLKKDPKQ 251
Query: 218 RW-----SAEELLNHTFI 230
R A+E++ H F
Sbjct: 252 RLGGGPSDAKEVMEHRFF 269
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 61/132 (46%), Gaps = 13/132 (9%)
Query: 50 MEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHG 103
++Y+ GG L ++ L+ R Y EI LH I++ DLK N+LL S G
Sbjct: 118 LDYINGGELFYHLQRERCFLEPRA-RFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG 176
Query: 104 DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVI 163
+ L D G K N + + GT ++APEVL + D D W LG ++
Sbjct: 177 HIVLTDFGLC------KENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLY 230
Query: 164 EMATGRPPWGDK 175
EM G PP+ +
Sbjct: 231 EMLYGLPPFYSR 242
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 119/282 (42%), Gaps = 59/282 (20%)
Query: 1 MNKGTGALFVVKSA--ESEAGV--QALRNEAEIRQSLNSPNIGR-----NGEKTVNIFME 51
+NK TG +K +SE G A+R E + + L NI R + E + + E
Sbjct: 25 LNKTTGVYVALKEVKLDSEEGTPSTAIR-EISLMKELKHENIVRLYDVIHTENKLTLVFE 83
Query: 52 YMAGG--SLLDVAEKFGGT---LDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLG 100
+M +D + G T L+ +++ + ++L H N ILH DLK N+L+
Sbjct: 84 FMDNDLKKYMD-SRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLIN 142
Query: 101 SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR-NEGLDFATDIWSLG 159
G +KL D G AR G ++ S T + AP+VL + + DIWS G
Sbjct: 143 KRGQLKLGDFGLARAF------GIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCG 196
Query: 160 CMVIEMATGRPPW----------------GDKISNAAATLLKIACSNE------------ 191
C++ EM TG+P + G + ++ K+ N
Sbjct: 197 CILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQ 256
Query: 192 --KPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFIS 231
+PH ++DFL L+ P+ R SA++ L+H + +
Sbjct: 257 VLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFA 298
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 24/175 (13%)
Query: 12 KSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLD--VAEK 64
K+ + +Q L E I + LN PNI + EKT+ + MEY +GG + D VA
Sbjct: 50 KTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH- 108
Query: 65 FGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVND 118
G + R ++I+ H I+H DLK N+LL ++K+ D G +
Sbjct: 109 --GRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFS----- 161
Query: 119 LKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLD-FATDIWSLGCMVIEMATGRPPW 172
N + + G+ + APE+ + + D D+WSLG ++ + +G P+
Sbjct: 162 --NEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 29/234 (12%)
Query: 21 QALRNEAEIRQSLNSPNIGRNGE-----KTVNIFMEYMAGGSLLD--VAEKFGGTLDAG- 72
++L E ++ + L+ PNI + E + E GG L D ++ K +DA
Sbjct: 77 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR 136
Query: 73 VIRLYTKEI--LHGNGILHCDLKCNNVLLGSH---GDVKLPDLGCARRVNDLKNNGNLKQ 127
+IR I +H N I+H DLK N+LL S ++++ D G L + +
Sbjct: 137 IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFG-------LSTHFEASK 189
Query: 128 SWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIA 187
+ GT ++APEVL D D+WS G ++ + +G PP+ +N L K+
Sbjct: 190 KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNG--ANEYDILKKVE 246
Query: 188 CSNEKPHFPTQFFKKV----LDFLAKCLERKPEKRWSAEELLNHTFISGNAKKN 237
P +KKV D + K L P R SA + L+H +I K+
Sbjct: 247 KGKYTFELPQ--WKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQ 298
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 33/178 (18%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN-DLKNNGNLKQSWQSIGGTQLWMA 140
+H +LH DLK +N+L+ + D+K+ D G AR + + + G L + T+ + A
Sbjct: 160 IHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXV----ATRWYRA 215
Query: 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDK------------------------ 175
PE++ N +G + DIWS+GC++ EM + RP + K
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 275
Query: 176 ISNAAATLLKIACSNEKPHFPTQFFK---KVLDFLAKCLERKPEKRWSAEELLNHTFI 230
I+ A L+ S K + F K K LD L + L P KR + EE L H ++
Sbjct: 276 INMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYL 333
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 101/243 (41%), Gaps = 25/243 (10%)
Query: 12 KSAESEAGVQALRNEAEIRQSLNSPNIGRNGE-----KTVNIFMEYMAGGSLLDVA---E 63
K++ + E E+ + L+ PNI + E + I E GG L D +
Sbjct: 57 KASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK 116
Query: 64 KFGGTLDAGVIRLYTKEI--LHGNGILHCDLKCNNVLLGSHG---DVKLPDLGCARRVND 118
+F A +I+ I +H + I+H DLK N+LL S D+K+ D G +
Sbjct: 117 RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS---TC 173
Query: 119 LKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISN 178
+ N +K GT ++APEVLR D D+WS G ++ + +G PP+ K N
Sbjct: 174 FQQNTKMKDRI----GTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK--N 226
Query: 179 AAATLLKIACSNEKPHFPT--QFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKK 236
L ++ P D + K L P R +A + L H +I + +
Sbjct: 227 EYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSE 286
Query: 237 NST 239
T
Sbjct: 287 TPT 289
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 29/234 (12%)
Query: 21 QALRNEAEIRQSLNSPNIGRNGE-----KTVNIFMEYMAGGSLLD--VAEKFGGTLDAG- 72
++L E ++ + L+ PNI + E + E GG L D ++ K +DA
Sbjct: 71 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR 130
Query: 73 VIRLYTKEI--LHGNGILHCDLKCNNVLLGSH---GDVKLPDLGCARRVNDLKNNGNLKQ 127
+IR I +H N I+H DLK N+LL S ++++ D G L + +
Sbjct: 131 IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFG-------LSTHFEASK 183
Query: 128 SWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIA 187
+ GT ++APEVL D D+WS G ++ + +G PP+ +N L K+
Sbjct: 184 KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNG--ANEYDILKKVE 240
Query: 188 CSNEKPHFPTQFFKKV----LDFLAKCLERKPEKRWSAEELLNHTFISGNAKKN 237
P +KKV D + K L P R SA + L+H +I K+
Sbjct: 241 KGKYTFELPQ--WKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQ 292
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 106/241 (43%), Gaps = 25/241 (10%)
Query: 5 TGALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR--NGEKTVN-IFM--EYMAGG 56
TG + +K + + + ++ E E ++L +I + + +T N IFM EY GG
Sbjct: 34 TGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGG 93
Query: 57 SLLDV---AEKFGGTLDAGVIRLYTKEI--LHGNGILHCDLKCNNVLLGSHGDVKLPDLG 111
L D ++ V R + +H G H DLK N+L + +KL D G
Sbjct: 94 ELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFG 153
Query: 112 -CARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEG-LDFATDIWSLGCMVIEMATGR 169
CA K GN Q+ G+ + APE+++ + L D+WS+G ++ + G
Sbjct: 154 LCA------KPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGF 207
Query: 170 PPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTF 229
P+ D N A KI K P + L + L+ P+KR S + LLNH +
Sbjct: 208 LPFDD--DNVMALYKKIM--RGKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPW 263
Query: 230 I 230
I
Sbjct: 264 I 264
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 26/235 (11%)
Query: 3 KGTGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGS 57
K + K+ + + +Q L E I + LN PNI + EKT+ + EY +GG
Sbjct: 40 KEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGE 99
Query: 58 LLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLG 111
+ D G + R ++I+ H I+H DLK N+LL + ++K+ D G
Sbjct: 100 VFDYLVAHGRXKEKEA-RAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFG 158
Query: 112 CARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFA-TDIWSLGCMVIEMATGRP 170
+ N + G + APE+ + + D D+WSLG ++ + +G
Sbjct: 159 FS-------NEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
Query: 171 PW-GDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
P+ G + +L+ K P + L K L P KR + E++
Sbjct: 212 PFDGQNLKELRERVLR-----GKYRIPFYXSTDCENLLKKFLILNPSKRGTLEQI 261
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 109/258 (42%), Gaps = 36/258 (13%)
Query: 1 MNKGTGALFVVKSAES----------EAGVQALRNEAEI-RQSLNSPNI-----GRNGEK 44
+++ TG F VK E E +A R E I RQ P+I
Sbjct: 114 VHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173
Query: 45 TVNIFMEYMAGGSLLD-VAEKFGGTLDA--GVIR--LYTKEILHGNGILHCDLKCNNVLL 99
+ + + M G L D + EK + ++R L LH N I+H DLK N+LL
Sbjct: 174 FMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL 233
Query: 100 GSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR------NEGLDFAT 153
+ ++L D G + L+ L++ + GT ++APE+L+ + G
Sbjct: 234 DDNMQIRLSDFGFS---CHLEPGEKLRE----LCGTPGYLAPEILKCSMDETHPGYGKEV 286
Query: 154 DIWSLGCMVIEMATGRPP-WGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLE 212
D+W+ G ++ + G PP W + +++ P + + V D +++ L+
Sbjct: 287 DLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDR-SSTVKDLISRLLQ 345
Query: 213 RKPEKRWSAEELLNHTFI 230
PE R +AE+ L H F
Sbjct: 346 VDPEARLTAEQALQHPFF 363
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 103/234 (44%), Gaps = 29/234 (12%)
Query: 21 QALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLD--VAEKFGGTLDAG- 72
++L E ++ + L+ PNI + + + E GG L D ++ K +DA
Sbjct: 94 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR 153
Query: 73 VIRLYTKEI--LHGNGILHCDLKCNNVLLGSH---GDVKLPDLGCARRVNDLKNNGNLKQ 127
+IR I +H N I+H DLK N+LL S ++++ D G L + +
Sbjct: 154 IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFG-------LSTHFEASK 206
Query: 128 SWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIA 187
+ GT ++APEVL D D+WS G ++ + +G PP+ +N L K+
Sbjct: 207 KMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNG--ANEYDILKKVE 263
Query: 188 CSNEKPHFPTQFFKKVL----DFLAKCLERKPEKRWSAEELLNHTFISGNAKKN 237
P +KKV D + K L P R SA + L+H +I K+
Sbjct: 264 KGKYTFELPQ--WKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQ 315
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 103/234 (44%), Gaps = 29/234 (12%)
Query: 21 QALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLD--VAEKFGGTLDAG- 72
++L E ++ + L+ PNI + + + E GG L D ++ K +DA
Sbjct: 95 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR 154
Query: 73 VIRLYTKEI--LHGNGILHCDLKCNNVLLGSH---GDVKLPDLGCARRVNDLKNNGNLKQ 127
+IR I +H N I+H DLK N+LL S ++++ D G L + +
Sbjct: 155 IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFG-------LSTHFEASK 207
Query: 128 SWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIA 187
+ GT ++APEVL D D+WS G ++ + +G PP+ +N L K+
Sbjct: 208 KMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNG--ANEYDILKKVE 264
Query: 188 CSNEKPHFPTQFFKKVL----DFLAKCLERKPEKRWSAEELLNHTFISGNAKKN 237
P +KKV D + K L P R SA + L+H +I K+
Sbjct: 265 KGKYTFELPQ--WKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQ 316
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 76/180 (42%), Gaps = 12/180 (6%)
Query: 46 VNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLL 99
+ + E GSLLD K G G + Y ++ G G L H DL N+LL
Sbjct: 89 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL 148
Query: 100 GSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLG 159
+ VK+ D G R + ++ + Q + + W APE L+ A+D W G
Sbjct: 149 ATRDLVKIGDFGLMRALPQ-NDDHYVMQEHRKVPFA--WCAPESLKTRTFSHASDTWMFG 205
Query: 160 CMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
+ EM T G+ PW N + L KI E+ P + + + + +C KPE R
Sbjct: 206 VTLWEMFTYGQEPWIG--LNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDR 263
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 76/180 (42%), Gaps = 12/180 (6%)
Query: 46 VNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLL 99
+ + E GSLLD K G G + Y ++ G G L H DL N+LL
Sbjct: 89 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL 148
Query: 100 GSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLG 159
+ VK+ D G R + ++ + Q + + W APE L+ A+D W G
Sbjct: 149 ATRDLVKIGDFGLMRALPQ-NDDHYVMQEHRKVPFA--WCAPESLKTRTFSHASDTWMFG 205
Query: 160 CMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
+ EM T G+ PW N + L KI E+ P + + + + +C KPE R
Sbjct: 206 VTLWEMFTYGQEPWIG--LNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDR 263
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH I+H DLK N+LL ++KL D G + +++ + +S+ GT ++AP
Sbjct: 140 LHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-------GEKLRSVCGTPSYLAP 192
Query: 142 EVLR------NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHF 195
E++ + G D+WS G ++ + G PP+ + L I N +
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR--KQMLMLRMIMSGNYQFGS 250
Query: 196 P--TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
P + V D +++ L +P+KR++AEE L H F
Sbjct: 251 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 100/239 (41%), Gaps = 31/239 (12%)
Query: 21 QALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAE-KFGGTLDAGVIR 75
+A EA++ + L + + E+ + I +EYM+ GSLLD + + G L +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 76 LYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSW 129
+I G + H DL+ N+L+G + K+ D G AR + D N +
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-----NEXTAR 172
Query: 130 QSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLL---- 184
Q W APE +D+WS G ++ E+ T GR P+ ++ +
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 232
Query: 185 KIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL---LNHTFISGNAKKNSTE 240
++ C E P + + D + +C + PE+R + E L L F S + E
Sbjct: 233 RMPCPPECP-------ESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 100/239 (41%), Gaps = 31/239 (12%)
Query: 21 QALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAE-KFGGTLDAGVIR 75
+A EA++ + L + + E+ + I +EYM+ GSLLD + + G L +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 76 LYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSW 129
+I G + H DL+ N+L+G + K+ D G AR + D N +
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-----NEYTAR 172
Query: 130 QSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLL---- 184
Q W APE +D+WS G ++ E+ T GR P+ ++ +
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 232
Query: 185 KIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL---LNHTFISGNAKKNSTE 240
++ C E P + + D + +C + PE+R + E L L F S + E
Sbjct: 233 RMPCPPECP-------ESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 98/234 (41%), Gaps = 25/234 (10%)
Query: 12 KSAESEAGVQALRNEAEIRQSLNSPNIGRNGE-----KTVNIFMEYMAGGSLLDVA---E 63
K++ + E E+ + L+ PNI + E + I E GG L D +
Sbjct: 57 KASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK 116
Query: 64 KFGGTLDAGVIRLYTKEI--LHGNGILHCDLKCNNVLLGSHG---DVKLPDLGCARRVND 118
+F A +I+ I +H + I+H DLK N+LL S D+K+ D G +
Sbjct: 117 RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS---TC 173
Query: 119 LKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISN 178
+ N +K GT ++APEVLR D D+WS G ++ + +G PP+ K N
Sbjct: 174 FQQNTKMKDRI----GTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK--N 226
Query: 179 AAATLLKIACSNEKPHFPT--QFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
L ++ P D + K L P R +A + L H +I
Sbjct: 227 EYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWI 280
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 76/180 (42%), Gaps = 12/180 (6%)
Query: 46 VNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLL 99
+ + E GSLLD K G G + Y ++ G G L H DL N+LL
Sbjct: 95 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL 154
Query: 100 GSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLG 159
+ VK+ D G R + ++ + Q + + W APE L+ A+D W G
Sbjct: 155 ATRDLVKIGDFGLMRALPQ-NDDHXVMQEHRKVPFA--WCAPESLKTRTFSHASDTWMFG 211
Query: 160 CMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
+ EM T G+ PW N + L KI E+ P + + + + +C KPE R
Sbjct: 212 VTLWEMFTYGQEPWIG--LNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDR 269
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 15/117 (12%)
Query: 56 GSLLDVAEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLL--GSHGDVKLPDLGCA 113
G L++ KF + ++ L T E+ I+HCDLK N+LL +K+ D G +
Sbjct: 153 GVSLNLTRKFAQQMCTALLFLATPEL----SIIHCDLKPENILLCNPKRSAIKIVDFGSS 208
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRP 170
++ ++ +Q I ++ + +PEVL D A D+WSLGC+++EM TG P
Sbjct: 209 CQLG--------QRIYQXIQ-SRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEP 256
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 90/223 (40%), Gaps = 21/223 (9%)
Query: 15 ESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69
E V+ EA + + + PN+ + E I +E+M G+LLD +
Sbjct: 46 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE 105
Query: 70 DAGVIRLY-------TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
+ V+ LY E L +H DL N L+G + VK+ D G +R +
Sbjct: 106 VSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT----- 160
Query: 123 GNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAA 181
G+ + W APE L +D+W+ G ++ E+AT G P+ +
Sbjct: 161 GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVY 220
Query: 182 TLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
LL+ E+P + KV + + C + P R S E+
Sbjct: 221 ELLEKDYRMERPEGCPE---KVYELMRACWQWNPSDRPSFAEI 260
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 76/180 (42%), Gaps = 12/180 (6%)
Query: 46 VNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLL 99
+ + E GSLLD K G G + Y ++ G G L H DL N+LL
Sbjct: 85 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL 144
Query: 100 GSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLG 159
+ VK+ D G R + ++ + Q + + W APE L+ A+D W G
Sbjct: 145 ATRDLVKIGDFGLMRALPQ-NDDHYVMQEHRKVPFA--WCAPESLKTRTFSHASDTWMFG 201
Query: 160 CMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
+ EM T G+ PW N + L KI E+ P + + + + +C KPE R
Sbjct: 202 VTLWEMFTYGQEPWIG--LNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDR 259
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 76/180 (42%), Gaps = 12/180 (6%)
Query: 46 VNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLL 99
+ + E GSLLD K G G + Y ++ G G L H DL N+LL
Sbjct: 85 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL 144
Query: 100 GSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLG 159
+ VK+ D G R + ++ + Q + + W APE L+ A+D W G
Sbjct: 145 ATRDLVKIGDFGLMRALPQ-NDDHXVMQEHRKVPFA--WCAPESLKTRTFSHASDTWMFG 201
Query: 160 CMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
+ EM T G+ PW N + L KI E+ P + + + + +C KPE R
Sbjct: 202 VTLWEMFTYGQEPWIG--LNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDR 259
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 76/180 (42%), Gaps = 12/180 (6%)
Query: 46 VNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLL 99
+ + E GSLLD K G G + Y ++ G G L H DL N+LL
Sbjct: 85 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL 144
Query: 100 GSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLG 159
+ VK+ D G R + ++ + Q + + W APE L+ A+D W G
Sbjct: 145 ATRDLVKIGDFGLMRALPQ-NDDHYVMQEHRKVPFA--WCAPESLKTRTFSHASDTWMFG 201
Query: 160 CMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
+ EM T G+ PW N + L KI E+ P + + + + +C KPE R
Sbjct: 202 VTLWEMFTYGQEPWIG--LNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDR 259
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 76/180 (42%), Gaps = 12/180 (6%)
Query: 46 VNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLL 99
+ + E GSLLD K G G + Y ++ G G L H DL N+LL
Sbjct: 95 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL 154
Query: 100 GSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLG 159
+ VK+ D G R + ++ + Q + + W APE L+ A+D W G
Sbjct: 155 ATRDLVKIGDFGLMRALPQ-NDDHYVMQEHRKVPFA--WCAPESLKTRTFSHASDTWMFG 211
Query: 160 CMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
+ EM T G+ PW N + L KI E+ P + + + + +C KPE R
Sbjct: 212 VTLWEMFTYGQEPWIG--LNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDR 269
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 99/239 (41%), Gaps = 31/239 (12%)
Query: 21 QALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAE-KFGGTLDAGVIR 75
+A EA++ + L + + E+ + I MEYM+ G LLD + + G L +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLV 117
Query: 76 LYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSW 129
+I G + H DL+ N+L+G + K+ D G AR + D N +
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-----NEYTAR 172
Query: 130 QSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLL---- 184
Q W APE +D+WS G ++ E+ T GR P+ ++ +
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 232
Query: 185 KIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL---LNHTFISGNAKKNSTE 240
++ C E P + + D + +C + PE+R + E L L F S + E
Sbjct: 233 RMPCPPECP-------ESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 15/117 (12%)
Query: 56 GSLLDVAEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLL--GSHGDVKLPDLGCA 113
G L++ KF + ++ L T E+ I+HCDLK N+LL +K+ D G +
Sbjct: 134 GVSLNLTRKFAQQMCTALLFLATPEL----SIIHCDLKPENILLCNPKRSAIKIVDFGSS 189
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRP 170
++ ++ +Q I ++ + +PEVL D A D+WSLGC+++EM TG P
Sbjct: 190 CQLG--------QRIYQXIQ-SRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEP 237
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 104/253 (41%), Gaps = 38/253 (15%)
Query: 3 KGTGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGRNGEKTVNIF------------M 50
K TG L+ VK + + +Q E + + ++ RN +F M
Sbjct: 45 KETGDLYAVKVLKKDVILQDDDVECTMTEK-RILSLARNHPFLTQLFCCFQTPDRLFFVM 103
Query: 51 EYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGD 104
E++ GG L+ +K D R Y EI LH GI++ DLK +NVLL G
Sbjct: 104 EFVNGGDLMFHIQK-SRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGH 162
Query: 105 VKLPDLG-CARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVI 163
KL D G C + NG + + GT ++APE+L+ A D W++G ++
Sbjct: 163 CKLADFGMCKEGI----CNG---VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLY 215
Query: 164 EMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSA-- 221
EM G P+ + + L A N++ +PT + L + + P R +
Sbjct: 216 EMLCGHAPFEAENEDD----LFEAILNDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLT 271
Query: 222 ----EELLNHTFI 230
+L H F
Sbjct: 272 QGGEHAILRHPFF 284
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 18/162 (11%)
Query: 48 IFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGS 101
+ M+Y GG LL + KF L + R Y E+ +H +H D+K +N+L+
Sbjct: 151 LVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM 210
Query: 102 HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EG----LDFATDIW 156
+G ++L D G + L +G ++ S GT +++PE+L+ EG D W
Sbjct: 211 NGHIRLADFGSCLK---LMEDGTVQSSVAV--GTPDYISPEILQAMEGGKGRYGPECDWW 265
Query: 157 SLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQ 198
SLG + EM G P+ + T KI E+ FPTQ
Sbjct: 266 SLGVCMYEMLYGETPF--YAESLVETYGKIMNHKERFQFPTQ 305
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 27/226 (11%)
Query: 15 ESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69
E V+ EA + + + PN+ + E I +E+M G+LLD +
Sbjct: 48 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE 107
Query: 70 DAGVIRLYTK-------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
+ V+ LY E L +H DL N L+G + VK+ D G +R +
Sbjct: 108 VSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG---- 163
Query: 123 GNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISN 178
++ + G + W APE L +D+W+ G ++ E+AT G P+ +
Sbjct: 164 ----DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 219
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
LL+ E+P + KV + + C + P R S E+
Sbjct: 220 QVYELLEKDYRMERPEGCPE---KVYELMRACWQWNPSDRPSFAEI 262
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 15/117 (12%)
Query: 56 GSLLDVAEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLL--GSHGDVKLPDLGCA 113
G L++ KF + ++ L T E+ I+HCDLK N+LL +K+ D G +
Sbjct: 153 GVSLNLTRKFAQQMCTALLFLATPEL----SIIHCDLKPENILLCNPKRXAIKIVDFGSS 208
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRP 170
++ ++ +Q I ++ + +PEVL D A D+WSLGC+++EM TG P
Sbjct: 209 CQLG--------QRIYQXIQ-SRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEP 256
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 102/234 (43%), Gaps = 29/234 (12%)
Query: 21 QALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLD--VAEKFGGTLDAG- 72
++L E ++ + L+ PNI + + + E GG L D ++ K +DA
Sbjct: 71 ESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR 130
Query: 73 VIRLYTKEIL--HGNGILHCDLKCNNVLLGSH---GDVKLPDLGCARRVNDLKNNGNLKQ 127
+IR I H N I+H DLK N+LL S ++++ D G L + +
Sbjct: 131 IIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFG-------LSTHFEASK 183
Query: 128 SWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIA 187
+ GT ++APEVL D D+WS G ++ + +G PP+ +N L K+
Sbjct: 184 KXKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNG--ANEYDILKKVE 240
Query: 188 CSNEKPHFPTQFFKKV----LDFLAKCLERKPEKRWSAEELLNHTFISGNAKKN 237
P +KKV D + K L P R SA + L+H +I K+
Sbjct: 241 KGKYTFELPQ--WKKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQTYTKEQ 292
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 27/226 (11%)
Query: 15 ESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69
E V+ EA + + + PN+ + E I +E+M G+LLD +
Sbjct: 48 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE 107
Query: 70 DAGVIRLYTK-------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
+ V+ LY E L +H DL N L+G + VK+ D G +R +
Sbjct: 108 VSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG---- 163
Query: 123 GNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISN 178
++ + G + W APE L +D+W+ G ++ E+AT G P+ +
Sbjct: 164 ----DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 219
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
LL+ E+P + KV + + C + P R S E+
Sbjct: 220 QVYELLEKDYRMERPEGCPE---KVYELMRACWQWNPSDRPSFAEI 262
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 101/242 (41%), Gaps = 37/242 (15%)
Query: 21 QALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAE-KFGGTLDAGVIR 75
+A EA++ + L + + E+ + I EYM GSLLD + + G L +
Sbjct: 55 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLV 114
Query: 76 LYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSW 129
+ +I G + H DL+ N+L+G + K+ D G AR + D W
Sbjct: 115 DMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED--------NEW 166
Query: 130 QSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLL- 184
+ G + W APE +D+WS G ++ E+ T GR P+ ++ +
Sbjct: 167 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 226
Query: 185 ---KIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL---LNHTFISGNAKKNS 238
++ C E P + + D + +C ++PE+R + E L L F S +
Sbjct: 227 RGYRMPCPPECP-------ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQP 279
Query: 239 TE 240
E
Sbjct: 280 GE 281
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 99/239 (41%), Gaps = 31/239 (12%)
Query: 21 QALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAE-KFGGTLDAGVIR 75
+A EA++ + L + + E+ + I EYM+ GSLLD + + G L +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 76 LYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSW 129
+I G + H DL+ N+L+G + K+ D G AR + D N +
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-----NEYTAR 172
Query: 130 QSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLL---- 184
Q W APE +D+WS G ++ E+ T GR P+ ++ +
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 232
Query: 185 KIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL---LNHTFISGNAKKNSTE 240
++ C E P + + D + +C + PE+R + E L L F S + E
Sbjct: 233 RMPCPPECP-------ESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 99/239 (41%), Gaps = 31/239 (12%)
Query: 21 QALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAE-KFGGTLDAGVIR 75
+A EA++ + L + + E+ + I EYM+ GSLLD + + G L +
Sbjct: 49 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV 108
Query: 76 LYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSW 129
+I G + H DL+ N+L+G + K+ D G AR + D N +
Sbjct: 109 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-----NEYTAR 163
Query: 130 QSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLL---- 184
Q W APE +D+WS G ++ E+ T GR P+ ++ +
Sbjct: 164 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 223
Query: 185 KIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL---LNHTFISGNAKKNSTE 240
++ C E P + + D + +C + PE+R + E L L F S + E
Sbjct: 224 RMPCPPECP-------ESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 275
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 99/239 (41%), Gaps = 31/239 (12%)
Query: 21 QALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAE-KFGGTLDAGVIR 75
+A EA++ + L + + E+ + I EYM+ GSLLD + + G L +
Sbjct: 47 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV 106
Query: 76 LYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSW 129
+I G + H DL+ N+L+G + K+ D G AR + D N +
Sbjct: 107 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-----NEYTAR 161
Query: 130 QSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLL---- 184
Q W APE +D+WS G ++ E+ T GR P+ ++ +
Sbjct: 162 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 221
Query: 185 KIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL---LNHTFISGNAKKNSTE 240
++ C E P + + D + +C + PE+R + E L L F S + E
Sbjct: 222 RMPCPPECP-------ESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 273
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 89/223 (39%), Gaps = 21/223 (9%)
Query: 15 ESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69
E V+ EA + + + PN+ + E I E+M G+LLD +
Sbjct: 46 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 105
Query: 70 DAGVIRLYTK-------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
+ V+ LY E L +H DL N L+G + VK+ D G +R +
Sbjct: 106 VSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT----- 160
Query: 123 GNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAA 181
G+ + W APE L +D+W+ G ++ E+AT G P+ +
Sbjct: 161 GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVY 220
Query: 182 TLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
LL+ E+P + KV + + C + P R S E+
Sbjct: 221 ELLEKDYRMERPEGCPE---KVYELMRACWQWNPSDRPSFAEI 260
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 108/244 (44%), Gaps = 25/244 (10%)
Query: 6 GALFVVKSAESEAGVQALRNEAEIRQSLNSPNI-----GRNGEKTVNIFMEYMAGGSLLD 60
A FV+ ES+ + +R E + L P + + + + E+M+GG L +
Sbjct: 80 AAKFVMTPHESDK--ETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFE 137
Query: 61 -VAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSH--GDVKLPDLG 111
VA++ + + Y +++ +H N +H DLK N++ + ++KL D G
Sbjct: 138 KVADEHNKMSEDEAVE-YMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFG 196
Query: 112 CARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPP 171
++ KQS + GT + APEV + + + TD+WS+G + + +G P
Sbjct: 197 LTAHLDP-------KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 249
Query: 172 WGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFIS 231
+G + + +K N + + DF+ K L P R + + L H +++
Sbjct: 250 FGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLT 309
Query: 232 -GNA 234
GNA
Sbjct: 310 PGNA 313
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 28/220 (12%)
Query: 21 QALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAE-KFGGTLDAGVIR 75
+A EA++ + L + + E+ + I EYM+ GSLLD + + G L +
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV 283
Query: 76 LYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSW 129
+I G + H DL+ N+L+G + K+ D G AR + D N +
Sbjct: 284 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-----NEYTAR 338
Query: 130 QSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLL---- 184
Q W APE +D+WS G ++ E+ T GR P+ ++ +
Sbjct: 339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 398
Query: 185 KIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
++ C E P + + D + +C ++PE+R + E L
Sbjct: 399 RMPCPPECP-------ESLHDLMCQCWRKEPEERPTFEYL 431
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 108/244 (44%), Gaps = 25/244 (10%)
Query: 6 GALFVVKSAESEAGVQALRNEAEIRQSLNSPNI-----GRNGEKTVNIFMEYMAGGSLLD 60
A FV+ ES+ + +R E + L P + + + + E+M+GG L +
Sbjct: 186 AAKFVMTPHESDK--ETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFE 243
Query: 61 -VAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSH--GDVKLPDLG 111
VA++ + + Y +++ +H N +H DLK N++ + ++KL D G
Sbjct: 244 KVADEHNKMSEDEAVE-YMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFG 302
Query: 112 CARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPP 171
++ KQS + GT + APEV + + + TD+WS+G + + +G P
Sbjct: 303 LTAHLDP-------KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 355
Query: 172 WGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFIS 231
+G + + +K N + + DF+ K L P R + + L H +++
Sbjct: 356 FGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLT 415
Query: 232 -GNA 234
GNA
Sbjct: 416 PGNA 419
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 28/220 (12%)
Query: 21 QALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAE-KFGGTLDAGVIR 75
+A EA++ + L + + E+ + I EYM+ GSLLD + + G L +
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV 283
Query: 76 LYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSW 129
+I G + H DL+ N+L+G + K+ D G AR + D N +
Sbjct: 284 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-----NEYTAR 338
Query: 130 QSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLL---- 184
Q W APE +D+WS G ++ E+ T GR P+ ++ +
Sbjct: 339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 398
Query: 185 KIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
++ C E P + + D + +C ++PE+R + E L
Sbjct: 399 RMPCPPECP-------ESLHDLMCQCWRKEPEERPTFEYL 431
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 100/239 (41%), Gaps = 31/239 (12%)
Query: 21 QALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAE-KFGGTLDAGVIR 75
+A EA++ + L + + E+ + I EYM+ GSLLD + + G L +
Sbjct: 48 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLV 107
Query: 76 LYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSW 129
+I G + H DL+ N+L+G + K+ D G AR + D N +
Sbjct: 108 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-----NEXTAR 162
Query: 130 QSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLL---- 184
Q W APE +D+WS G ++ E+ T GR P+ ++ +
Sbjct: 163 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 222
Query: 185 KIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL---LNHTFISGNAKKNSTE 240
++ C E P + + D + +C ++PE+R + E L L F S + E
Sbjct: 223 RMPCPPECP-------ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 274
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 99/239 (41%), Gaps = 31/239 (12%)
Query: 21 QALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAE-KFGGTLDAGVIR 75
+A EA++ + L + + E+ + I EYM+ GSLLD + + G L +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 76 LYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSW 129
+I G + H DL+ N+L+G + K+ D G AR + D N +
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-----NEYTAR 172
Query: 130 QSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLL---- 184
Q W APE +D+WS G ++ E+ T GR P+ ++ +
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 232
Query: 185 KIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL---LNHTFISGNAKKNSTE 240
++ C E P + + D + +C + PE+R + E L L F S + E
Sbjct: 233 RMPCPPECP-------ESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 104/257 (40%), Gaps = 52/257 (20%)
Query: 15 ESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69
E A A+R E + + L NI + EK++ + EY+ L + G +
Sbjct: 40 EEGAPCTAIR-EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNII 97
Query: 70 DAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNG 123
+ ++L+ ++L H +LH DLK N+L+ G++KL D G AR
Sbjct: 98 NMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLAR-------AK 150
Query: 124 NLKQSWQSIGGTQLWMAPEVLRNEGLDFAT--DIWSLGCMVIEMATGRPPW-GDKISNAA 180
++ LW P + D++T D+W +GC+ EMATGRP + G +
Sbjct: 151 SIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQL 210
Query: 181 ATLLKI-----------ACSNEKPHFPTQFFKKV----------------LDFLAKCLER 213
+ +I SNE+ F T + K D L K L+
Sbjct: 211 HFIFRILGTPTEETWPGILSNEE--FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQF 268
Query: 214 KPEKRWSAEELLNHTFI 230
+ R SAE+ + H F
Sbjct: 269 EGRNRISAEDAMKHPFF 285
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 100/239 (41%), Gaps = 31/239 (12%)
Query: 21 QALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAE-KFGGTLDAGVIR 75
+A EA++ + L + + E+ + I EYM+ GSLLD + + G L +
Sbjct: 51 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV 110
Query: 76 LYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSW 129
+I G + H DL+ N+L+G + K+ D G AR + D N +
Sbjct: 111 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-----NEYTAR 165
Query: 130 QSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLL---- 184
Q W APE +D+WS G ++ E+ T GR P+ ++ +
Sbjct: 166 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 225
Query: 185 KIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL---LNHTFISGNAKKNSTE 240
++ C E P + + D + +C ++PE+R + E L L F S + E
Sbjct: 226 RMPCPPECP-------ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 277
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 16/134 (11%)
Query: 46 VNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLL 99
++ ++ M GG L + G +A +R Y EI +H +++ DLK N+LL
Sbjct: 266 LSFILDLMNGGDLHYHLSQHGVFSEAD-MRFYAAEIILGLEHMHNRFVVYRDLKPANILL 324
Query: 100 GSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-RNEGLDFATDIWSL 158
HG V++ DLG A + K + ++ GT +MAPEVL + D + D +SL
Sbjct: 325 DEHGHVRISDLGLACDFSKKKPHASV--------GTHGYMAPEVLQKGVAYDSSADWFSL 376
Query: 159 GCMVIEMATGRPPW 172
GCM+ ++ G P+
Sbjct: 377 GCMLFKLLRGHSPF 390
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 91/226 (40%), Gaps = 27/226 (11%)
Query: 15 ESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69
E V+ EA + + + PN+ + E I E+M G+LLD +
Sbjct: 48 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 107
Query: 70 DAGVIRLYTK-------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
+ V+ LY E L +H DL N L+G + VK+ D G +R +
Sbjct: 108 VSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG---- 163
Query: 123 GNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISN 178
++ + G + W APE L +D+W+ G ++ E+AT G P+ +
Sbjct: 164 ----DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 219
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
LL+ E+P + KV + + C + P R S E+
Sbjct: 220 QVYELLEKDYRMERPEGCPE---KVYELMRACWQWNPSDRPSFAEI 262
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 16/134 (11%)
Query: 46 VNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLL 99
++ ++ M GG L + G +A +R Y EI +H +++ DLK N+LL
Sbjct: 267 LSFILDLMNGGDLHYHLSQHGVFSEAD-MRFYAAEIILGLEHMHNRFVVYRDLKPANILL 325
Query: 100 GSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-RNEGLDFATDIWSL 158
HG V++ DLG A + K + ++ GT +MAPEVL + D + D +SL
Sbjct: 326 DEHGHVRISDLGLACDFSKKKPHASV--------GTHGYMAPEVLQKGVAYDSSADWFSL 377
Query: 159 GCMVIEMATGRPPW 172
GCM+ ++ G P+
Sbjct: 378 GCMLFKLLRGHSPF 391
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 91/226 (40%), Gaps = 27/226 (11%)
Query: 15 ESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69
E V+ EA + + + PN+ + E I E+M G+LLD +
Sbjct: 48 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 107
Query: 70 DAGVIRLYTK-------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
+ V+ LY E L +H DL N L+G + VK+ D G +R +
Sbjct: 108 VSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG---- 163
Query: 123 GNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISN 178
++ + G + W APE L +D+W+ G ++ E+AT G P+ +
Sbjct: 164 ----DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 219
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
LL+ E+P + KV + + C + P R S E+
Sbjct: 220 QVYELLEKDYRMERPEGCPE---KVYELMRACWQWNPSDRPSFAEI 262
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 91/226 (40%), Gaps = 27/226 (11%)
Query: 15 ESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69
E V+ EA + + + PN+ + E I E+M G+LLD +
Sbjct: 53 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 112
Query: 70 DAGVIRLYTK-------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
+ V+ LY E L +H DL N L+G + VK+ D G +R +
Sbjct: 113 VSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG---- 168
Query: 123 GNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISN 178
++ + G + W APE L +D+W+ G ++ E+AT G P+ +
Sbjct: 169 ----DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 224
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
LL+ E+P + KV + + C + P R S E+
Sbjct: 225 QVYELLEKDYRMERPEGCPE---KVYELMRACWQWNPSDRPSFAEI 267
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 91/226 (40%), Gaps = 27/226 (11%)
Query: 15 ESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69
E V+ EA + + + PN+ + E I E+M G+LLD +
Sbjct: 46 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 105
Query: 70 DAGVIRLYTK-------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
+ V+ LY E L +H DL N L+G + VK+ D G +R +
Sbjct: 106 VSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG---- 161
Query: 123 GNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISN 178
++ + G + W APE L +D+W+ G ++ E+AT G P+ +
Sbjct: 162 ----DTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPS 217
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
LL+ E+P + KV + + C + P R S E+
Sbjct: 218 QVYELLEKDYRMERPEGCPE---KVYELMRACWQWNPSDRPSFAEI 260
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 170 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 220
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I+ A+++
Sbjct: 221 EIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMP 280
Query: 189 SNEK-------PHFPTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S+E P P + F V +D L K L +KR +A E L H + S
Sbjct: 281 SHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFS 338
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 16/134 (11%)
Query: 46 VNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLL 99
++ ++ M GG L + G +A +R Y EI +H +++ DLK N+LL
Sbjct: 267 LSFILDLMNGGDLHYHLSQHGVFSEAD-MRFYAAEIILGLEHMHNRFVVYRDLKPANILL 325
Query: 100 GSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-RNEGLDFATDIWSL 158
HG V++ DLG A + K + ++ GT +MAPEVL + D + D +SL
Sbjct: 326 DEHGHVRISDLGLACDFSKKKPHASV--------GTHGYMAPEVLQKGVAYDSSADWFSL 377
Query: 159 GCMVIEMATGRPPW 172
GCM+ ++ G P+
Sbjct: 378 GCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 16/134 (11%)
Query: 46 VNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLL 99
++ ++ M GG L + G +A +R Y EI +H +++ DLK N+LL
Sbjct: 267 LSFILDLMNGGDLHYHLSQHGVFSEAD-MRFYAAEIILGLEHMHNRFVVYRDLKPANILL 325
Query: 100 GSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-RNEGLDFATDIWSL 158
HG V++ DLG A + K + ++ GT +MAPEVL + D + D +SL
Sbjct: 326 DEHGHVRISDLGLACDFSKKKPHASV--------GTHGYMAPEVLQKGVAYDSSADWFSL 377
Query: 159 GCMVIEMATGRPPW 172
GCM+ ++ G P+
Sbjct: 378 GCMLFKLLRGHSPF 391
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 24/194 (12%)
Query: 43 EKTVNIFMEYMAGGSLLDVAE-KFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCN 95
E+ + I EYM+ GSLLD + + G L + +I G + H DL+
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 392
Query: 96 NVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDI 155
N+L+G + K+ D G AR + D N + Q W APE +D+
Sbjct: 393 NILVGENLVCKVADFGLARLIED-----NEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 447
Query: 156 WSLGCMVIEMAT-GRPPWGDKISNAAATLL----KIACSNEKPHFPTQFFKKVLDFLAKC 210
WS G ++ E+ T GR P+ ++ + ++ C E P + + D + +C
Sbjct: 448 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP-------ESLHDLMCQC 500
Query: 211 LERKPEKRWSAEEL 224
++PE+R + E L
Sbjct: 501 WRKEPEERPTFEYL 514
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 17/158 (10%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH I+H DLK N+LL ++KL D G + +++ + + + GT ++AP
Sbjct: 140 LHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-------GEKLREVCGTPSYLAP 192
Query: 142 EVLR------NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHF 195
E++ + G D+WS G ++ + G PP+ + L I N +
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR--KQMLMLRMIMSGNYQFGS 250
Query: 196 P--TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFIS 231
P + V D +++ L +P+KR++AEE L H F
Sbjct: 251 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 17/158 (10%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH I+H DLK N+LL ++KL D G + +++ + + + GT ++AP
Sbjct: 127 LHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-------GEKLREVCGTPSYLAP 179
Query: 142 EVLR------NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHF 195
E++ + G D+WS G ++ + G PP+ + L I N +
Sbjct: 180 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR--KQMLMLRMIMSGNYQFGS 237
Query: 196 P--TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFIS 231
P + V D +++ L +P+KR++AEE L H F
Sbjct: 238 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 275
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 103/235 (43%), Gaps = 40/235 (17%)
Query: 20 VQALRNEAEIRQSLNSPNIGR-------NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAG 72
++ + E I + L+ PN+ + E + + E + G +++V + D
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQA 139
Query: 73 VIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLK 126
R Y + E LH I+H D+K +N+L+G G +K+ D G + N+ K + L
Sbjct: 140 --RFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVS---NEFKGSDAL- 193
Query: 127 QSWQSIGGTQLWMAPEVLRNEGLDF---ATDIWSLGCMVIEMATGRPPWGDKISNAAATL 183
+ GT +MAPE L F A D+W++G + G+ P+ D+
Sbjct: 194 --LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE-------- 243
Query: 184 LKIACSNEKP-----HFPTQ--FFKKVLDFLAKCLERKPEKRWSAEELLNHTFIS 231
+I C + K FP Q + + D + + L++ PE R E+ H +++
Sbjct: 244 -RIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 99/239 (41%), Gaps = 31/239 (12%)
Query: 21 QALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAE-KFGGTLDAGVIR 75
+A EA++ + + + + E+ + I EYM+ GSLLD + + G L +
Sbjct: 58 EAFLQEAQVMKKIRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 76 LYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSW 129
+I G + H DL+ N+L+G + K+ D G AR + D N +
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-----NEYTAR 172
Query: 130 QSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLL---- 184
Q W APE +D+WS G ++ E+ T GR P+ ++ +
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 232
Query: 185 KIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL---LNHTFISGNAKKNSTE 240
++ C E P + + D + +C + PE+R + E L L F S + E
Sbjct: 233 RMPCPPECP-------ESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 91/226 (40%), Gaps = 27/226 (11%)
Query: 15 ESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69
E V+ EA + + + PN+ + E I +E+M G+LLD +
Sbjct: 53 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE 112
Query: 70 DAGVIRLYTK-------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
V+ LY E L +H DL N L+G + VK+ D G +R +
Sbjct: 113 VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG---- 168
Query: 123 GNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISN 178
++ + G + W APE L +D+W+ G ++ E+AT G P+ +
Sbjct: 169 ----DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 224
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
LL+ E+P + KV + + C + P R S E+
Sbjct: 225 QVYELLEKDYRMERPEGCPE---KVYELMRACWQWNPSDRPSFAEI 267
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 109/256 (42%), Gaps = 35/256 (13%)
Query: 1 MNKGTGALFVVKSAE-----SEAGV--QALRNEAEIRQSLNSPNI-----GRNGEKTVNI 48
+N+ TG F VK + S G+ + L+ EA I L P+I + + + +
Sbjct: 44 INRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103
Query: 49 FMEYMAGGSL-LDVAEKF--GGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLL 99
E+M G L ++ ++ G V Y ++IL H N I+H D+K NVLL
Sbjct: 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLL 163
Query: 100 GSH---GDVKLPDLGCARRVND--LKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATD 154
S VKL D G A ++ + L G + GT +MAPEV++ E D
Sbjct: 164 ASKENSAPVKLGDFGVAIQLGESGLVAGGRV--------GTPHFMAPEVVKREPYGKPVD 215
Query: 155 IWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERK 214
+W G ++ + +G P+ ++K P + + D + + L
Sbjct: 216 VWGCGVILFILLSGCLPFYGTKERLFEGIIK-GKYKMNPRQWSHISESAKDLVRRMLMLD 274
Query: 215 PEKRWSAEELLNHTFI 230
P +R + E LNH ++
Sbjct: 275 PAERITVYEALNHPWL 290
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 89/223 (39%), Gaps = 21/223 (9%)
Query: 15 ESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69
E V+ EA + + + PN+ + E I +E+M G+LLD +
Sbjct: 49 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE 108
Query: 70 DAGVIRLYTK-------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
V+ LY E L +H DL N L+G + VK+ D G +R +
Sbjct: 109 VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT----- 163
Query: 123 GNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAA 181
G+ + W APE L +D+W+ G ++ E+AT G P+ +
Sbjct: 164 GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 223
Query: 182 TLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
LL+ E+P + KV + + C + P R S E+
Sbjct: 224 ELLEKDYRMERPEGCPE---KVYELMRACWQWNPSDRPSFAEI 263
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 98/239 (41%), Gaps = 31/239 (12%)
Query: 21 QALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAE-KFGGTLDAGVIR 75
+A EA++ + L + + E+ + I EYM+ GSLLD + + G L +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 76 LYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSW 129
+I G + H DL N+L+G + K+ D G AR + D N +
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIED-----NEYTAR 172
Query: 130 QSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLL---- 184
Q W APE +D+WS G ++ E+ T GR P+ ++ +
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 232
Query: 185 KIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL---LNHTFISGNAKKNSTE 240
++ C E P + + D + +C + PE+R + E L L F S + E
Sbjct: 233 RMPCPPECP-------ESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 100/239 (41%), Gaps = 31/239 (12%)
Query: 21 QALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAE-KFGGTLDAGVIR 75
+A EA++ + L + + E+ + I EYM GSLLD + + G L +
Sbjct: 55 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLV 114
Query: 76 LYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSW 129
+ +I G + H DL+ N+L+G + K+ D G AR + D N +
Sbjct: 115 DMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-----NEYTAR 169
Query: 130 QSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLL---- 184
Q W APE +D+WS G ++ E+ T GR P+ ++ +
Sbjct: 170 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 229
Query: 185 KIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL---LNHTFISGNAKKNSTE 240
++ C E P + + D + +C ++PE+R + E L L F S + E
Sbjct: 230 RMPCPPECP-------ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 281
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 106/266 (39%), Gaps = 40/266 (15%)
Query: 1 MNKGTGALFVVKSAESEAGVQALRNEAEIR-QSLNSPNIGR---------NGEKTVNIFM 50
NK T F +K + R E E+ ++ P+I R G K + I M
Sbjct: 52 FNKRTQEKFALKMLQD---CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM 108
Query: 51 EYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI----------LHGNGILHCDLKCNNVLLG 100
E + GG L + G D EI LH I H D+K N+L
Sbjct: 109 ECLDGGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 165
Query: 101 S---HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWS 157
S + +KL D G A+ S + T ++APEVL E D + D+WS
Sbjct: 166 SKRPNAILKLTDFGFAKETTS-------HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 218
Query: 158 LGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP----TQFFKKVLDFLAKCLER 213
LG ++ + G PP+ A + +K + FP ++ ++V + L+
Sbjct: 219 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT 278
Query: 214 KPEKRWSAEELLNHTFISGNAKKNST 239
+P +R + E +NH +I + K T
Sbjct: 279 EPTQRMTITEFMNHPWIMQSTKVPQT 304
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 28/220 (12%)
Query: 21 QALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAE-KFGGTLDAGVIR 75
+A EA++ + L + + E+ + I EYM+ GSLLD + + G L +
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLV 283
Query: 76 LYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSW 129
+I G + H DL+ N+L+G + K+ D G AR + D N +
Sbjct: 284 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-----NEYTAR 338
Query: 130 QSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLL---- 184
Q W APE +D+WS G ++ E+ T GR P+ ++ +
Sbjct: 339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 398
Query: 185 KIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
++ C E P + + D + +C ++PE+R + E L
Sbjct: 399 RMPCPPECP-------ESLHDLMCQCWRKEPEERPTFEYL 431
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 106/266 (39%), Gaps = 40/266 (15%)
Query: 1 MNKGTGALFVVKSAESEAGVQALRNEAEIR-QSLNSPNIGR---------NGEKTVNIFM 50
NK T F +K + R E E+ ++ P+I R G K + I M
Sbjct: 43 FNKRTQEKFALKMLQD---CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM 99
Query: 51 EYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI----------LHGNGILHCDLKCNNVLLG 100
E + GG L + G D EI LH I H D+K N+L
Sbjct: 100 ECLDGGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 156
Query: 101 S---HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWS 157
S + +KL D G A+ S + T ++APEVL E D + D+WS
Sbjct: 157 SKRPNAILKLTDFGFAKETTS-------HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 209
Query: 158 LGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP----TQFFKKVLDFLAKCLER 213
LG ++ + G PP+ A + +K + FP ++ ++V + L+
Sbjct: 210 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT 269
Query: 214 KPEKRWSAEELLNHTFISGNAKKNST 239
+P +R + E +NH +I + K T
Sbjct: 270 EPTQRMTITEFMNHPWIMQSTKVPQT 295
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 27/226 (11%)
Query: 15 ESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69
E V+ EA + + + PN+ + E I E+M G+LLD +
Sbjct: 61 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 120
Query: 70 DAGVIRLYTK-------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
V+ LY E L +H DL N L+G + VK+ D G +R +
Sbjct: 121 VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG---- 176
Query: 123 GNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISN 178
++ + G + W APE L +D+W+ G ++ E+AT G P+ +
Sbjct: 177 ----DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 232
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
LL+ E+P + KV + + C + P R S E+
Sbjct: 233 QVYELLEKDYRMERPEGCPE---KVYELMRACWQWNPSDRPSFAEI 275
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 106/266 (39%), Gaps = 40/266 (15%)
Query: 1 MNKGTGALFVVKSAESEAGVQALRNEAEIR-QSLNSPNIGR---------NGEKTVNIFM 50
NK T F +K + R E E+ ++ P+I R G K + I M
Sbjct: 44 FNKRTQEKFALKMLQD---CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM 100
Query: 51 EYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI----------LHGNGILHCDLKCNNVLLG 100
E + GG L + G D EI LH I H D+K N+L
Sbjct: 101 ECLDGGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 157
Query: 101 S---HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWS 157
S + +KL D G A+ S + T ++APEVL E D + D+WS
Sbjct: 158 SKRPNAILKLTDFGFAKETTS-------HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 210
Query: 158 LGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP----TQFFKKVLDFLAKCLER 213
LG ++ + G PP+ A + +K + FP ++ ++V + L+
Sbjct: 211 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT 270
Query: 214 KPEKRWSAEELLNHTFISGNAKKNST 239
+P +R + E +NH +I + K T
Sbjct: 271 EPTQRMTITEFMNHPWIMQSTKVPQT 296
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 89/215 (41%), Gaps = 27/215 (12%)
Query: 42 GEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI----------LHGNGILHCD 91
G K + I ME + GG L + G D EI LH I H D
Sbjct: 136 GRKCLLIVMECLDGGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSINIAHRD 192
Query: 92 LKCNNVLLGS---HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEG 148
+K N+L S + +KL D G A+ S + T ++APEVL E
Sbjct: 193 VKPENLLYTSKRPNAILKLTDFGFAKETTS-------HNSLTTPCYTPYYVAPEVLGPEK 245
Query: 149 LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP----TQFFKKVL 204
D + D+WSLG ++ + G PP+ A + +K + FP ++ ++V
Sbjct: 246 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 305
Query: 205 DFLAKCLERKPEKRWSAEELLNHTFISGNAKKNST 239
+ L+ +P +R + E +NH +I + K T
Sbjct: 306 MLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 340
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 106/266 (39%), Gaps = 40/266 (15%)
Query: 1 MNKGTGALFVVKSAESEAGVQALRNEAEIR-QSLNSPNIGR---------NGEKTVNIFM 50
NK T F +K + R E E+ ++ P+I R G K + I M
Sbjct: 38 FNKRTQEKFALKMLQD---CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM 94
Query: 51 EYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI----------LHGNGILHCDLKCNNVLLG 100
E + GG L + G D EI LH I H D+K N+L
Sbjct: 95 ECLDGGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 151
Query: 101 S---HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWS 157
S + +KL D G A+ S + T ++APEVL E D + D+WS
Sbjct: 152 SKRPNAILKLTDFGFAKETTS-------HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 204
Query: 158 LGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP----TQFFKKVLDFLAKCLER 213
LG ++ + G PP+ A + +K + FP ++ ++V + L+
Sbjct: 205 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT 264
Query: 214 KPEKRWSAEELLNHTFISGNAKKNST 239
+P +R + E +NH +I + K T
Sbjct: 265 EPTQRMTITEFMNHPWIMQSTKVPQT 290
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 106/266 (39%), Gaps = 40/266 (15%)
Query: 1 MNKGTGALFVVKSAESEAGVQALRNEAEIR-QSLNSPNIGR---------NGEKTVNIFM 50
NK T F +K + R E E+ ++ P+I R G K + I M
Sbjct: 42 FNKRTQEKFALKMLQD---CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM 98
Query: 51 EYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI----------LHGNGILHCDLKCNNVLLG 100
E + GG L + G D EI LH I H D+K N+L
Sbjct: 99 ECLDGGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 155
Query: 101 S---HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWS 157
S + +KL D G A+ S + T ++APEVL E D + D+WS
Sbjct: 156 SKRPNAILKLTDFGFAKETTS-------HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 208
Query: 158 LGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP----TQFFKKVLDFLAKCLER 213
LG ++ + G PP+ A + +K + FP ++ ++V + L+
Sbjct: 209 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT 268
Query: 214 KPEKRWSAEELLNHTFISGNAKKNST 239
+P +R + E +NH +I + K T
Sbjct: 269 EPTQRMTITEFMNHPWIMQSTKVPQT 294
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 106/266 (39%), Gaps = 40/266 (15%)
Query: 1 MNKGTGALFVVKSAESEAGVQALRNEAEIR-QSLNSPNIGR---------NGEKTVNIFM 50
NK T F +K + R E E+ ++ P+I R G K + I M
Sbjct: 36 FNKRTQEKFALKMLQD---CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM 92
Query: 51 EYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI----------LHGNGILHCDLKCNNVLLG 100
E + GG L + G D EI LH I H D+K N+L
Sbjct: 93 ECLDGGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 149
Query: 101 S---HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWS 157
S + +KL D G A+ S + T ++APEVL E D + D+WS
Sbjct: 150 SKRPNAILKLTDFGFAKETTS-------HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 202
Query: 158 LGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP----TQFFKKVLDFLAKCLER 213
LG ++ + G PP+ A + +K + FP ++ ++V + L+
Sbjct: 203 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT 262
Query: 214 KPEKRWSAEELLNHTFISGNAKKNST 239
+P +R + E +NH +I + K T
Sbjct: 263 EPTQRMTITEFMNHPWIMQSTKVPQT 288
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 27/226 (11%)
Query: 15 ESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69
E V+ EA + + + PN+ + E I E+M G+LLD +
Sbjct: 48 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 107
Query: 70 DAGVIRLYTK-------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
V+ LY E L +H DL N L+G + VK+ D G +R +
Sbjct: 108 VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG---- 163
Query: 123 GNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISN 178
++ + G + W APE L +D+W+ G ++ E+AT G P+ +
Sbjct: 164 ----DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 219
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
LL+ E+P + KV + + C + P R S E+
Sbjct: 220 QVYELLEKDYRMERPEGCPE---KVYELMRACWQWNPSDRPSFAEI 262
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 27/226 (11%)
Query: 15 ESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69
E V+ EA + + + PN+ + E I E+M G+LLD +
Sbjct: 50 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 109
Query: 70 DAGVIRLYTK-------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
V+ LY E L +H DL N L+G + VK+ D G +R +
Sbjct: 110 VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG---- 165
Query: 123 GNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISN 178
++ + G + W APE L +D+W+ G ++ E+AT G P+ +
Sbjct: 166 ----DTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 221
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
LL+ E+P + KV + + C + P R S E+
Sbjct: 222 QVYELLEKDYRMERPEGCPE---KVYELMRACWQWNPSDRPSFAEI 264
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 106/266 (39%), Gaps = 40/266 (15%)
Query: 1 MNKGTGALFVVKSAESEAGVQALRNEAEIR-QSLNSPNIGR---------NGEKTVNIFM 50
NK T F +K + R E E+ ++ P+I R G K + I M
Sbjct: 38 FNKRTQEKFALKMLQD---CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM 94
Query: 51 EYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI----------LHGNGILHCDLKCNNVLLG 100
E + GG L + G D EI LH I H D+K N+L
Sbjct: 95 ECLDGGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 151
Query: 101 S---HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWS 157
S + +KL D G A+ S + T ++APEVL E D + D+WS
Sbjct: 152 SKRPNAILKLTDFGFAKETTS-------HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 204
Query: 158 LGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP----TQFFKKVLDFLAKCLER 213
LG ++ + G PP+ A + +K + FP ++ ++V + L+
Sbjct: 205 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT 264
Query: 214 KPEKRWSAEELLNHTFISGNAKKNST 239
+P +R + E +NH +I + K T
Sbjct: 265 EPTQRMTITEFMNHPWIMQSTKVPQT 290
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 21/188 (11%)
Query: 48 IFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTK-----EILHGNGILHCDLKCNNVLLGSH 102
+ MEY++GG L D K G + RL+ + + H + ++H DLK NVLL +H
Sbjct: 88 MVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAH 147
Query: 103 GDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFA---TDIWSLG 159
+ K+ D G + ++D + ++ G+ + APEV+ G +A DIWS G
Sbjct: 148 MNAKIADFGLSNMMSD-------GEFLRTSCGSPNYAAPEVI--SGRLYAGPEVDIWSCG 198
Query: 160 CMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
++ + G P+ D+ TL K + P + V L L+ P KR
Sbjct: 199 VILYALLCGTLPFDDE---HVPTLFK-KIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRA 254
Query: 220 SAEELLNH 227
+ +++ H
Sbjct: 255 TIKDIREH 262
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 106/266 (39%), Gaps = 40/266 (15%)
Query: 1 MNKGTGALFVVKSAESEAGVQALRNEAEIR-QSLNSPNIGR---------NGEKTVNIFM 50
NK T F +K + R E E+ ++ P+I R G K + I M
Sbjct: 37 FNKRTQEKFALKMLQD---CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM 93
Query: 51 EYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI----------LHGNGILHCDLKCNNVLLG 100
E + GG L + G D EI LH I H D+K N+L
Sbjct: 94 ECLDGGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 150
Query: 101 S---HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWS 157
S + +KL D G A+ S + T ++APEVL E D + D+WS
Sbjct: 151 SKRPNAILKLTDFGFAKETTS-------HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 203
Query: 158 LGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP----TQFFKKVLDFLAKCLER 213
LG ++ + G PP+ A + +K + FP ++ ++V + L+
Sbjct: 204 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT 263
Query: 214 KPEKRWSAEELLNHTFISGNAKKNST 239
+P +R + E +NH +I + K T
Sbjct: 264 EPTQRMTITEFMNHPWIMQSTKVPQT 289
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 27/226 (11%)
Query: 15 ESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69
E V+ EA + + + PN+ + E I E+M G+LLD +
Sbjct: 48 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 107
Query: 70 DAGVIRLYTK-------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
V+ LY E L +H DL N L+G + VK+ D G +R +
Sbjct: 108 VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG---- 163
Query: 123 GNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISN 178
++ + G + W APE L +D+W+ G ++ E+AT G P+ +
Sbjct: 164 ----DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 219
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
LL+ E+P + KV + + C + P R S E+
Sbjct: 220 QVYELLEKDYRMERPEGCPE---KVYELMRACWQWNPSDRPSFAEI 262
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 27/226 (11%)
Query: 15 ESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69
E V+ EA + + + PN+ + E I E+M G+LLD +
Sbjct: 49 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 108
Query: 70 DAGVIRLYTK-------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
V+ LY E L +H DL N L+G + VK+ D G +R +
Sbjct: 109 VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG---- 164
Query: 123 GNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISN 178
++ + G + W APE L +D+W+ G ++ E+AT G P+ +
Sbjct: 165 ----DTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 220
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
LL+ E+P + KV + + C + P R S E+
Sbjct: 221 QVYELLEKDYRMERPEGCPE---KVYELMRACWQWNPSDRPSFAEI 263
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 27/226 (11%)
Query: 15 ESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69
E V+ EA + + + PN+ + E I E+M G+LLD +
Sbjct: 52 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 111
Query: 70 DAGVIRLYTK-------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
V+ LY E L +H DL N L+G + VK+ D G +R +
Sbjct: 112 VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG---- 167
Query: 123 GNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISN 178
++ + G + W APE L +D+W+ G ++ E+AT G P+ +
Sbjct: 168 ----DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 223
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
LL+ E+P + KV + + C + P R S E+
Sbjct: 224 QVYELLEKDYRMERPEGCPE---KVYELMRACWQWNPSDRPSFAEI 266
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 27/226 (11%)
Query: 15 ESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69
E V+ EA + + + PN+ + E I E+M G+LLD +
Sbjct: 50 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 109
Query: 70 DAGVIRLYTK-------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
V+ LY E L +H DL N L+G + VK+ D G +R +
Sbjct: 110 VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG---- 165
Query: 123 GNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISN 178
++ + G + W APE L +D+W+ G ++ E+AT G P+ +
Sbjct: 166 ----DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 221
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
LL+ E+P + KV + + C + P R S E+
Sbjct: 222 QVYELLEKDYRMERPEGCPE---KVYELMRACWQWNPSDRPSFAEI 264
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 23/189 (12%)
Query: 48 IFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTK-----EILHGNGILHCDLKCNNVLLGSH 102
+ MEY++GG L D K G + RL+ + + H + ++H DLK NVLL +H
Sbjct: 88 MVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAH 147
Query: 103 GDVKLPDLGCARRVND---LKNN-GNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSL 158
+ K+ D G + ++D L+++ G+ + + +L+ PEV DIWS
Sbjct: 148 MNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEV----------DIWSC 197
Query: 159 GCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
G ++ + G P+ D+ TL K + P + V L L+ P KR
Sbjct: 198 GVILYALLCGTLPFDDE---HVPTLFK-KIRGGVFYIPEYLNRSVATLLMHMLQVDPLKR 253
Query: 219 WSAEELLNH 227
+ +++ H
Sbjct: 254 ATIKDIREH 262
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 27/226 (11%)
Query: 15 ESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69
E V+ EA + + + PN+ + E I E+M G+LLD +
Sbjct: 53 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 112
Query: 70 DAGVIRLYTK-------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
V+ LY E L +H DL N L+G + VK+ D G +R +
Sbjct: 113 VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG---- 168
Query: 123 GNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISN 178
++ + G + W APE L +D+W+ G ++ E+AT G P+ +
Sbjct: 169 ----DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 224
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
LL+ E+P + KV + + C + P R S E+
Sbjct: 225 QVYELLEKDYRMERPEGCPE---KVYELMRACWQWNPSDRPSFAEI 267
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 89/215 (41%), Gaps = 27/215 (12%)
Query: 42 GEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI----------LHGNGILHCD 91
G K + I ME + GG L + G D EI LH I H D
Sbjct: 130 GRKCLLIVMECLDGGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSINIAHRD 186
Query: 92 LKCNNVLLGS---HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEG 148
+K N+L S + +KL D G A+ S + T ++APEVL E
Sbjct: 187 VKPENLLYTSKRPNAILKLTDFGFAKETTS-------HNSLTTPCYTPYYVAPEVLGPEK 239
Query: 149 LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP----TQFFKKVL 204
D + D+WSLG ++ + G PP+ A + +K + FP ++ ++V
Sbjct: 240 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 299
Query: 205 DFLAKCLERKPEKRWSAEELLNHTFISGNAKKNST 239
+ L+ +P +R + E +NH +I + K T
Sbjct: 300 MLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 334
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 27/226 (11%)
Query: 15 ESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69
E V+ EA + + + PN+ + E I E+M G+LLD +
Sbjct: 50 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 109
Query: 70 DAGVIRLY-------TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
V+ LY E L +H DL N L+G + VK+ D G +R +
Sbjct: 110 VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG---- 165
Query: 123 GNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISN 178
++ + G + W APE L +D+W+ G ++ E+AT G P+ +
Sbjct: 166 ----DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 221
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
LL+ E+P + KV + + C + P R S E+
Sbjct: 222 QVYELLEKDYRMERPEGCPE---KVYELMRACWQWNPSDRPSFAEI 264
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 28/220 (12%)
Query: 21 QALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAE-KFGGTLDAGVIR 75
+A EA++ + L + + E+ + I EYM+ GSLLD + + G L +
Sbjct: 225 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV 284
Query: 76 LYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSW 129
+I G + H DL+ N+L+G + K+ D G R + D N +
Sbjct: 285 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIED-----NEYTAR 339
Query: 130 QSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLL---- 184
Q W APE +D+WS G ++ E+ T GR P+ ++ +
Sbjct: 340 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 399
Query: 185 KIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
++ C E P + + D + +C + PE+R + E L
Sbjct: 400 RMPCPPECP-------ESLHDLMCQCWRKDPEERPTFEYL 432
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 27/226 (11%)
Query: 15 ESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69
E V+ EA + + + PN+ + E I E+M G+LLD +
Sbjct: 53 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 112
Query: 70 DAGVIRLY-------TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
V+ LY E L +H DL N L+G + VK+ D G +R +
Sbjct: 113 VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG---- 168
Query: 123 GNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISN 178
++ + G + W APE L +D+W+ G ++ E+AT G P+ +
Sbjct: 169 ----DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 224
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
LL+ E+P + KV + + C + P R S E+
Sbjct: 225 QVYELLEKDYRMERPEGCPE---KVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 31/239 (12%)
Query: 21 QALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAE-KFGGTLDAGVIR 75
+A EA++ + L + + E+ + I EYM+ G LLD + + G L +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLV 117
Query: 76 LYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSW 129
+I G + H DL+ N+L+G + K+ D G AR + D N +
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-----NEYTAR 172
Query: 130 QSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLL---- 184
Q W APE +D+WS G ++ E+ T GR P+ ++ +
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 232
Query: 185 KIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL---LNHTFISGNAKKNSTE 240
++ C E P + + D + +C + PE+R + E L L F S + E
Sbjct: 233 RMPCPPECP-------ESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 112/307 (36%), Gaps = 81/307 (26%)
Query: 3 KGTGALFVVKSAESEA----GVQALRNEAEIRQSLNSPNI--------GRNGEKTVNIFM 50
K TG V+ EA V L+ E + + N PNI N V FM
Sbjct: 33 KPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 92
Query: 51 EY-----------MAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLL 99
Y M G + L +A G L A + +H G +H +K +++L+
Sbjct: 93 AYGSAKDLICTHFMDGMNELAIAYILQGVLKA-------LDYIHHMGYVHRSVKASHILI 145
Query: 100 GSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL----WMAPEVLRN--EGLDFAT 153
G V L L R + ++G ++ + W++PEVL+ +G D +
Sbjct: 146 SVDGKVYLSGL---RSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKS 202
Query: 154 DIWSLGCMVIEMATGRPPWGDK-------------------------------------- 175
DI+S+G E+A G P+ D
Sbjct: 203 DIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVAN 262
Query: 176 --ISNAAATLLKIACSNEKPHFPTQ--FFKKVLDFLAKCLERKPEKRWSAEELLNHTFIS 231
+S++ T + + P P F F+ +CL+R P+ R SA LLNH+F
Sbjct: 263 SGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK 322
Query: 232 GNAKKNS 238
++ S
Sbjct: 323 QIKRRAS 329
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 88/223 (39%), Gaps = 21/223 (9%)
Query: 15 ESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69
E V+ EA + + + PN+ + E I E+M G+LLD +
Sbjct: 53 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 112
Query: 70 DAGVIRLY-------TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
V+ LY E L +H DL N L+G + VK+ D G +R +
Sbjct: 113 VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT----- 167
Query: 123 GNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAA 181
G+ + W APE L +D+W+ G ++ E+AT G P+ +
Sbjct: 168 GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 227
Query: 182 TLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
LL+ E+P + KV + + C + P R S E+
Sbjct: 228 ELLEKDYRMERPEGCPE---KVYELMRACWQWNPSDRPSFAEI 267
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 112/307 (36%), Gaps = 81/307 (26%)
Query: 3 KGTGALFVVKSAESEA----GVQALRNEAEIRQSLNSPNI--------GRNGEKTVNIFM 50
K TG V+ EA V L+ E + + N PNI N V FM
Sbjct: 49 KPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 108
Query: 51 EY-----------MAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLL 99
Y M G + L +A G L A + +H G +H +K +++L+
Sbjct: 109 AYGSAKDLICTHFMDGMNELAIAYILQGVLKA-------LDYIHHMGYVHRSVKASHILI 161
Query: 100 GSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL----WMAPEVLRN--EGLDFAT 153
G V L L R + ++G ++ + W++PEVL+ +G D +
Sbjct: 162 SVDGKVYLSGL---RSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKS 218
Query: 154 DIWSLGCMVIEMATGRPPWGDK-------------------------------------- 175
DI+S+G E+A G P+ D
Sbjct: 219 DIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVAN 278
Query: 176 --ISNAAATLLKIACSNEKPHFPTQ--FFKKVLDFLAKCLERKPEKRWSAEELLNHTFIS 231
+S++ T + + P P F F+ +CL+R P+ R SA LLNH+F
Sbjct: 279 SGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK 338
Query: 232 GNAKKNS 238
++ S
Sbjct: 339 QIKRRAS 345
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 21/194 (10%)
Query: 43 EKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNN 96
++ + I EYMA G LL+ + + K++ L LH DL N
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 135
Query: 97 VLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFAT 153
L+ G VK+ D G +R V D + S G++ W PEVL +
Sbjct: 136 CLVNDQGVVKVSDFGLSRYVLD--------DEYTSSRGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 154 DIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLE 212
DIW+ G ++ E+ + G+ P+ ++ A + +PH ++ KV + C
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE---KVYTIMYSCWH 244
Query: 213 RKPEKRWSAEELLN 226
K ++R + + LL+
Sbjct: 245 EKADERPTFKILLS 258
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 89/226 (39%), Gaps = 29/226 (12%)
Query: 15 ESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69
E V+ EA + + + PN+ + E I EYM G+LLD +
Sbjct: 67 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREE 126
Query: 70 DAGVIRLYTK-------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
V+ LY E L +H DL N L+G + VK+ D G +R +
Sbjct: 127 VTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTG---- 182
Query: 123 GNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISN 178
++ + G + W APE L +D+W+ G ++ E+AT G P+ +
Sbjct: 183 ----DTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 238
Query: 179 AAATLLKIACSNEKPH-FPTQFFKKVLDFLAKCLERKPEKRWSAEE 223
LL+ E+P P KV + + C + P R S E
Sbjct: 239 QVYDLLEKGYRMEQPEGCP----PKVYELMRACWKWSPADRPSFAE 280
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 22/206 (10%)
Query: 40 RNGEKTVNIFMEYMAGGSLLDVAEKFGGTL-----DAGVIRLYTKEI--LHGNGILHCDL 92
+G++ + I ME M GG L ++ G A ++R I LH + I H D+
Sbjct: 76 HHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDV 135
Query: 93 KCNNVLLGSH---GDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGL 149
K N+L S +KL D G A+ + + Q+ T ++APEVL E
Sbjct: 136 KPENLLYTSKEKDAVLKLTDFGFAKETT--------QNALQTPCYTPYYVAPEVLGPEKY 187
Query: 150 DFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLD---- 205
D + D+WSLG ++ + G PP+ A + +K + FP + +V +
Sbjct: 188 DKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQ 247
Query: 206 FLAKCLERKPEKRWSAEELLNHTFIS 231
+ L+ P +R + + +NH +I+
Sbjct: 248 LIRLLLKTDPTERLTITQFMNHPWIN 273
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 22/206 (10%)
Query: 40 RNGEKTVNIFMEYMAGGSLLDVAEKFGGTL-----DAGVIRLYTKEI--LHGNGILHCDL 92
+G++ + I ME M GG L ++ G A ++R I LH + I H D+
Sbjct: 95 HHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDV 154
Query: 93 KCNNVLLGSH---GDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGL 149
K N+L S +KL D G A+ + + Q+ T ++APEVL E
Sbjct: 155 KPENLLYTSKEKDAVLKLTDFGFAKETT--------QNALQTPCYTPYYVAPEVLGPEKY 206
Query: 150 DFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLD---- 205
D + D+WSLG ++ + G PP+ A + +K + FP + +V +
Sbjct: 207 DKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQ 266
Query: 206 FLAKCLERKPEKRWSAEELLNHTFIS 231
+ L+ P +R + + +NH +I+
Sbjct: 267 LIRLLLKTDPTERLTITQFMNHPWIN 292
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 25/215 (11%)
Query: 19 GVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDV--AEKFGGTLDA 71
VQA EA + ++L + R E+ + I EYMA GSLLD +++ G L
Sbjct: 51 SVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLP 110
Query: 72 GVIRLYTKEILHG------NGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNL 125
+I ++ +I G +H DL+ NVL+ K+ D G AR + D N
Sbjct: 111 KLID-FSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIED-----NE 164
Query: 126 KQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLL 184
+ + W APE + +D+WS G ++ E+ T G+ P+ + + T L
Sbjct: 165 YTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTAL 224
Query: 185 KIACSNEK-PHFPTQFFKKVLDFLAKCLERKPEKR 218
+ + P + + D + C + K E+R
Sbjct: 225 SQGYRMPRVENCPDELY----DIMKMCWKEKAEER 255
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 21/194 (10%)
Query: 43 EKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNN 96
++ + I EYMA G LL+ + + K++ L LH DL N
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 130
Query: 97 VLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFAT 153
L+ G VK+ D G +R V D + S G++ W PEVL +
Sbjct: 131 CLVNDQGVVKVSDFGLSRYVLD--------DEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 154 DIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLE 212
DIW+ G ++ E+ + G+ P+ ++ A + +PH ++ KV + C
Sbjct: 183 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE---KVYTIMYSCWH 239
Query: 213 RKPEKRWSAEELLN 226
K ++R + + LL+
Sbjct: 240 EKADERPTFKILLS 253
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 105/266 (39%), Gaps = 40/266 (15%)
Query: 1 MNKGTGALFVVKSAESEAGVQALRNEAEIR-QSLNSPNIGR---------NGEKTVNIFM 50
NK T F +K + R E E+ ++ P+I R G K + I M
Sbjct: 36 FNKRTQEKFALKMLQD---CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM 92
Query: 51 EYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI----------LHGNGILHCDLKCNNVLLG 100
E + GG L + G D EI LH I H D+K N+L
Sbjct: 93 ECLDGGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 149
Query: 101 S---HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWS 157
S + +KL D G A+ S T ++APEVL E D + D+WS
Sbjct: 150 SKRPNAILKLTDFGFAKETTS-------HNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWS 202
Query: 158 LGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP----TQFFKKVLDFLAKCLER 213
LG ++ + G PP+ A + +K + FP ++ ++V + L+
Sbjct: 203 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT 262
Query: 214 KPEKRWSAEELLNHTFISGNAKKNST 239
+P +R + E +NH +I + K T
Sbjct: 263 EPTQRMTITEFMNHPWIMQSTKVPQT 288
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 21/194 (10%)
Query: 43 EKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNN 96
++ + I EYMA G LL+ + + K++ L LH DL N
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 150
Query: 97 VLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFAT 153
L+ G VK+ D G +R V L + S G++ W PEVL +
Sbjct: 151 CLVNDQGVVKVSDFGLSRYV--------LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 154 DIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLE 212
DIW+ G ++ E+ + G+ P+ ++ A + +PH ++ KV + C
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE---KVYTIMYSCWH 259
Query: 213 RKPEKRWSAEELLN 226
K ++R + + LL+
Sbjct: 260 EKADERPTFKILLS 273
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 21/194 (10%)
Query: 43 EKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNN 96
++ + I EYMA G LL+ + + K++ L LH DL N
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 134
Query: 97 VLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFAT 153
L+ G VK+ D G +R V L + S G++ W PEVL +
Sbjct: 135 CLVNDQGVVKVSDFGLSRYV--------LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 186
Query: 154 DIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLE 212
DIW+ G ++ E+ + G+ P+ ++ A + +PH ++ KV + C
Sbjct: 187 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE---KVYTIMYSCWH 243
Query: 213 RKPEKRWSAEELLN 226
K ++R + + LL+
Sbjct: 244 EKADERPTFKILLS 257
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 21/194 (10%)
Query: 43 EKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNN 96
++ + I EYMA G LL+ + + K++ L LH DL N
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 135
Query: 97 VLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFAT 153
L+ G VK+ D G +R V D + S G++ W PEVL +
Sbjct: 136 CLVNDQGVVKVSDFGLSRYVLD--------DEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 154 DIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLE 212
DIW+ G ++ E+ + G+ P+ ++ A + +PH ++ KV + C
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE---KVYTIMYSCWH 244
Query: 213 RKPEKRWSAEELLN 226
K ++R + + LL+
Sbjct: 245 EKADERPTFKILLS 258
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 120/255 (47%), Gaps = 41/255 (16%)
Query: 3 KGTGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGRNGEKTVNIFMEYMAGGSLLDVA 62
KGT + V K S + RN + +S S E+ V IF E+++G LD+
Sbjct: 41 KGTDQVLVKKEI-SILNIARHRNILHLHESFES------MEELVMIF-EFISG---LDIF 89
Query: 63 EKFGGT---LDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSH--GDVKLPDLG 111
E+ + L+ I Y ++ LH + I H D++ N++ + +K+ + G
Sbjct: 90 ERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFG 149
Query: 112 CARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPP 171
AR+ LK N + + + + APEV +++ + ATD+WSLG +V + +G P
Sbjct: 150 QARQ---LKPGDNFRLLFTAPE----YYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINP 202
Query: 172 WGDKISNAAATLLKIA--CSNEKPHFPTQFFKKV----LDFLAKCLERKPEKRWSAEELL 225
+ A T +I N + F + FK++ +DF+ + L ++ + R +A E L
Sbjct: 203 F------LAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEAL 256
Query: 226 NHTFISGNAKKNSTE 240
H ++ ++ ST+
Sbjct: 257 QHPWLKQKIERVSTK 271
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 21/194 (10%)
Query: 43 EKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNN 96
++ + I EYMA G LL+ + + K++ L LH DL N
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 141
Query: 97 VLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFAT 153
L+ G VK+ D G +R V L + S G++ W PEVL +
Sbjct: 142 CLVNDQGVVKVSDFGLSRYV--------LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 193
Query: 154 DIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLE 212
DIW+ G ++ E+ + G+ P+ ++ A + +PH ++ KV + C
Sbjct: 194 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE---KVYTIMYSCWH 250
Query: 213 RKPEKRWSAEELLN 226
K ++R + + LL+
Sbjct: 251 EKADERPTFKILLS 264
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 13/158 (8%)
Query: 82 LHGNGILHCDLKCNNVLLG---SHGDVK--LPDLGCARRVNDLKNNGNLKQSWQSIGGTQ 136
LH I+H DLK +N+L+ +HG +K + D G +++ +++ + + + GT+
Sbjct: 134 LHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSG---VPGTE 190
Query: 137 LWMAPEVLR---NEGLDFATDIWSLGCMVIE-MATGRPPWGDKISNAAATLLKIACSNEK 192
W+APE+L E + DI+S GC+ ++ G P+G + A LL ACS +
Sbjct: 191 GWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLG-ACSLDC 249
Query: 193 PHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
H + + K + P+KR SA+ +L H F
Sbjct: 250 LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 15/191 (7%)
Query: 43 EKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNN 96
++ + I EYMA G LL+ + + K++ L LH DL N
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 150
Query: 97 VLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIW 156
L+ G VK+ D G +R V D + ++ + W PEVL +DIW
Sbjct: 151 CLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPV-----RWSPPEVLMYSKFSSKSDIW 205
Query: 157 SLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKP 215
+ G ++ E+ + G+ P+ ++ A + +PH ++ KV + C K
Sbjct: 206 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE---KVYTIMYSCWHEKA 262
Query: 216 EKRWSAEELLN 226
++R + + LL+
Sbjct: 263 DERPTFKILLS 273
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 15/130 (11%)
Query: 50 MEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHG 103
MEY+ GG L+ ++ G + + Y EI L GI++ DLK +NV+L S G
Sbjct: 421 MEYVNGGDLMYHIQQVGRFKEPHAV-FYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG 479
Query: 104 DVKLPDLG-CARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMV 162
+K+ D G C + D + + GT ++APE++ + + D W+ G ++
Sbjct: 480 HIKIADFGMCKENIWD-------GVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLL 532
Query: 163 IEMATGRPPW 172
EM G+ P+
Sbjct: 533 YEMLAGQAPF 542
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 15/130 (11%)
Query: 50 MEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHG 103
MEY+ GG L+ ++ G + + Y EI L GI++ DLK +NV+L S G
Sbjct: 100 MEYVNGGDLMYHIQQVGRFKEPHAV-FYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG 158
Query: 104 DVKLPDLG-CARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMV 162
+K+ D G C + D + + GT ++APE++ + + D W+ G ++
Sbjct: 159 HIKIADFGMCKENIWD-------GVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLL 211
Query: 163 IEMATGRPPW 172
EM G+ P+
Sbjct: 212 YEMLAGQAPF 221
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 27/221 (12%)
Query: 20 VQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI 74
V+ EA + + + PN+ + E I E+M G+LLD + + V+
Sbjct: 260 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV 319
Query: 75 RLYTK-------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQ 127
LY E L +H +L N L+G + VK+ D G +R +
Sbjct: 320 LLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG--------D 371
Query: 128 SWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATL 183
++ + G + W APE L +D+W+ G ++ E+AT G P+ + L
Sbjct: 372 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 431
Query: 184 LKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
L+ E+P + KV + + C + P R S E+
Sbjct: 432 LEKDYRMERPEGCPE---KVYELMRACWQWNPSDRPSFAEI 469
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 16/156 (10%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWM 139
E LH GI+H D+K N+LL + G +K+ LG A ++ + + S G+ +
Sbjct: 123 EYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ----GSPAFQ 178
Query: 140 APEVLRNEGLD----FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPH 194
PE+ GLD F DIWS G + + TG P+ GD I + K + +
Sbjct: 179 PPEI--ANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYA----- 231
Query: 195 FPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230
P + D L LE +P KR+S ++ H++
Sbjct: 232 IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWF 267
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 19/185 (10%)
Query: 1 MNKGTGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAG 55
++K + F VK + ++ PNI + + + + ME + G
Sbjct: 31 VHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90
Query: 56 GSLLDVAEK---FGGTLDAGVIRLYTKEI--LHGNGILHCDLKCNNVLLGSHGD---VKL 107
G L + +K F T + ++R + +H G++H DLK N+L D +K+
Sbjct: 91 GELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKI 150
Query: 108 PDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT 167
D G AR LK N Q ++ T + APE+L G D + D+WSLG ++ M +
Sbjct: 151 IDFGFAR----LKPPDN--QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLS 204
Query: 168 GRPPW 172
G+ P+
Sbjct: 205 GQVPF 209
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 30/219 (13%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTK 79
EA+ L+ P + + + E + I EY++ G LL+ G L+ +
Sbjct: 52 QEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCY 111
Query: 80 EILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
++ G L H DL N L+ VK+ D G R V D + S
Sbjct: 112 DVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD--------DQYVSSV 163
Query: 134 GTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPWGDKISNAAATLLKIACS 189
GT+ W APEV +D+W+ G ++ E+ + G+ P+ D +N+ +LK++
Sbjct: 164 GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPY-DLYTNSEV-VLKVSQG 221
Query: 190 NE--KPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226
+ +PH + + + C PEKR + ++LL+
Sbjct: 222 HRLYRPHLASD---TIYQIMYSCWHELPEKRPTFQQLLS 257
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 22/199 (11%)
Query: 34 NSPNIGRNGEKTVNIFMEYMAGGSLLD-VAEKFGGTLDAGV-IRLYTK-----EILHGNG 86
NS N R+ K + I ME+ G+L + ++ G LD + + L+ + + +H
Sbjct: 97 NSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK 156
Query: 87 ILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146
++H DLK +N+ L VK+ D G V LKN+G +S GT +M+PE + +
Sbjct: 157 LIHRDLKPSNIFLVDTKQVKIGDFGL---VTSLKNDGKRTRS----KGTLRYMSPEQISS 209
Query: 147 EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDF 206
+ D+++LG ++ E+ + + A K F KK
Sbjct: 210 QDYGKEVDLYALGLILAELL--------HVCDTAFETSKFFTDLRDGIISDIFDKKEKTL 261
Query: 207 LAKCLERKPEKRWSAEELL 225
L K L +KPE R + E+L
Sbjct: 262 LQKLLSKKPEDRPNTSEIL 280
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWM 139
+ LH N I+H DLK N+L+ S G VKL D G AR + + + + T +
Sbjct: 126 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY-------SYQMALDPVVVTLWYR 178
Query: 140 APEVLRNEGLDFATDIWSLGCMVIEMATGRP 170
APEVL D+WS+GC+ EM +P
Sbjct: 179 APEVLLQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWM 139
+ LH N I+H DLK N+L+ S G VKL D G AR + + + + T +
Sbjct: 134 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY-------SYQMALTPVVVTLWYR 186
Query: 140 APEVLRNEGLDFATDIWSLGCMVIEMATGRP 170
APEVL D+WS+GC+ EM +P
Sbjct: 187 APEVLLQSTYATPVDMWSVGCIFAEMFRRKP 217
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWM 139
+ LH N I+H DLK N+L+ S G VKL D G AR + + + + T +
Sbjct: 126 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY-------SYQMALAPVVVTLWYR 178
Query: 140 APEVLRNEGLDFATDIWSLGCMVIEMATGRP 170
APEVL D+WS+GC+ EM +P
Sbjct: 179 APEVLLQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 31/232 (13%)
Query: 21 QALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVA---EKFGGTLDAG 72
+ + NE + +SL+ PNI + +K + E+ GG L + KF A
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN 150
Query: 73 VIRLYTKEI--LHGNGILHCDLKCNNVLL---GSHGDVKLPDLGCARRVN-DLKNNGNLK 126
+++ I LH + I+H D+K N+LL S ++K+ D G + + D K L
Sbjct: 151 IMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL- 209
Query: 127 QSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKI 186
GT ++APEVL+ + + D+WS G ++ + G PP+G + N + K+
Sbjct: 210 -------GTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCGYPPFGGQ--NDQDIIKKV 259
Query: 187 ACSNEKPHFPTQFFKKVLD----FLAKCLERKPEKRWSAEELLNHTFISGNA 234
K +F +K + D + L KR +AEE LN +I A
Sbjct: 260 EKG--KYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYA 309
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 90/226 (39%), Gaps = 27/226 (11%)
Query: 15 ESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69
E V+ EA + + + PN+ + E I E+M G+LLD +
Sbjct: 294 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 353
Query: 70 DAGVIRLYTK-------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN 122
V+ LY E L +H +L N L+G + VK+ D G +R +
Sbjct: 354 VNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG---- 409
Query: 123 GNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISN 178
++ + G + W APE L +D+W+ G ++ E+AT G P+ +
Sbjct: 410 ----DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 465
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
LL+ E+P + KV + + C + P R S E+
Sbjct: 466 QVYELLEKDYRMERPEGCPE---KVYELMRACWQWNPSDRPSFAEI 508
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 89/221 (40%), Gaps = 27/221 (12%)
Query: 20 VQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI 74
V+ EA + + + PN+ + E I E+M G+LLD + V+
Sbjct: 257 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 316
Query: 75 RLYTK-------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQ 127
LY E L +H +L N L+G + VK+ D G +R +
Sbjct: 317 LLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG--------D 368
Query: 128 SWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATL 183
++ + G + W APE L +D+W+ G ++ E+AT G P+ + L
Sbjct: 369 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 428
Query: 184 LKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
L+ E+P + KV + + C + P R S E+
Sbjct: 429 LEKDYRMERPEGCPE---KVYELMRACWQWNPSDRPSFAEI 466
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H GI+H DLK +NV + ++++ D G AR+ ++ + G + W + AP
Sbjct: 147 IHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADE-EMTGYVATRW--------YRAP 197
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN-----------AAATLLKIA 187
E++ N + DIWS+GC++ E+ G+ P D I + L KI+
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKIS 257
Query: 188 CSNEK------PHFPTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
+ + P P + + +D L + L ++R SA E L H + S
Sbjct: 258 SEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFS 315
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 113/269 (42%), Gaps = 49/269 (18%)
Query: 5 TGALFVVKSAESEAGVQALR-NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGG-- 56
T AL ++ + + G+ + E I + L NI + + +K + + E++
Sbjct: 28 TFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLK 87
Query: 57 SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDL 110
LLDV E G L++ + + ++L H +LH DLK N+L+ G++K+ D
Sbjct: 88 KLLDVCE---GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADF 144
Query: 111 GCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR-NEGLDFATDIWSLGCMVIEMATGR 169
G AR G + + T + AP+VL ++ DIWS+GC+ EM G
Sbjct: 145 GLARAF------GIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198
Query: 170 P--PWGDKISNAAATLLKIACSNEK------------PHF------PTQFFKKVL----- 204
P P + + N K P+F P + F K L
Sbjct: 199 PLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGI 258
Query: 205 DFLAKCLERKPEKRWSAEELLNHTFISGN 233
D L+K L+ P +R +A++ L H + N
Sbjct: 259 DLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 90/220 (40%), Gaps = 42/220 (19%)
Query: 46 VNIFMEYMAGGSLLDVAEKFGGTLDAG--------VIRLYTKEILHG-------NGILHC 90
V I EYM S+L E F LD VI+ K +L+ I H
Sbjct: 118 VYIIYEYMENDSILKFDEYFF-VLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHR 176
Query: 91 DLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLD 150
D+K +N+L+ +G VKL D G + + D K G+ GT +M PE NE
Sbjct: 177 DVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGS--------RGTYEFMPPEFFSNESSY 228
Query: 151 --FATDIWSLGCMVIEMATGRPPWGDKIS-----------NAAATLLK----IACSNEKP 193
DIWSLG + M P+ KIS N L + +N+K
Sbjct: 229 NGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKS 288
Query: 194 HFPTQFFK-KVLDFLAKCLERKPEKRWSAEELLNHTFISG 232
F + +DFL L + P +R ++E+ L H +++
Sbjct: 289 TCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLAD 328
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 113/269 (42%), Gaps = 49/269 (18%)
Query: 5 TGALFVVKSAESEAGVQALR-NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGG-- 56
T AL ++ + + G+ + E I + L NI + + +K + + E++
Sbjct: 28 TFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLK 87
Query: 57 SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDL 110
LLDV E G L++ + + ++L H +LH DLK N+L+ G++K+ D
Sbjct: 88 KLLDVCE---GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADF 144
Query: 111 GCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR-NEGLDFATDIWSLGCMVIEMATGR 169
G AR G + + T + AP+VL ++ DIWS+GC+ EM G
Sbjct: 145 GLARAF------GIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198
Query: 170 P--PWGDKISNAAATLLKIACSNEK------------PHF------PTQFFKKVL----- 204
P P + + N K P+F P + F K L
Sbjct: 199 PLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGI 258
Query: 205 DFLAKCLERKPEKRWSAEELLNHTFISGN 233
D L+K L+ P +R +A++ L H + N
Sbjct: 259 DLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H GI+H DLK +NV + ++++ D G AR+ ++ + G + W + AP
Sbjct: 147 IHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADE-EMTGYVATRW--------YRAP 197
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN-----------AAATLLKIA 187
E++ N + DIWS+GC++ E+ G+ P D I + L KI+
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKIS 257
Query: 188 CSNEK------PHFPTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
+ + P P + + +D L + L ++R SA E L H + S
Sbjct: 258 SEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFS 315
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 113/269 (42%), Gaps = 49/269 (18%)
Query: 5 TGALFVVKSAESEAGVQALR-NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGG-- 56
T AL ++ + + G+ + E I + L NI + + +K + + E++
Sbjct: 28 TFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLK 87
Query: 57 SLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDL 110
LLDV E G L++ + + ++L H +LH DLK N+L+ G++K+ D
Sbjct: 88 KLLDVCE---GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADF 144
Query: 111 GCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR-NEGLDFATDIWSLGCMVIEMATGR 169
G AR G + + T + AP+VL ++ DIWS+GC+ EM G
Sbjct: 145 GLARAF------GIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGA 198
Query: 170 P--PWGDKISNAAATLLKIACSNEK------------PHF------PTQFFKKVL----- 204
P P + + N K P+F P + F K L
Sbjct: 199 PLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGI 258
Query: 205 DFLAKCLERKPEKRWSAEELLNHTFISGN 233
D L+K L+ P +R +A++ L H + N
Sbjct: 259 DLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWM 139
+ LH N I+H DLK N+L+ S G VKL D G AR + + + + T +
Sbjct: 126 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY-------SYQMALFPVVVTLWYR 178
Query: 140 APEVLRNEGLDFATDIWSLGCMVIEMATGRP 170
APEVL D+WS+GC+ EM +P
Sbjct: 179 APEVLLQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 36/231 (15%)
Query: 20 VQALRNEAEIRQSLNSPNI-GRNG----EKTVNIFMEYMAGGSL----------LDVAEK 64
++ +R EA++ L PNI G E + + ME+ GG L D+
Sbjct: 50 IENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVN 109
Query: 65 FGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLL---GSHGDV-----KLPDLGCARRV 116
+ + G+ L+ + I+ I+H DLK +N+L+ +GD+ K+ D G AR
Sbjct: 110 WAVQIARGMNYLHDEAIV---PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW 166
Query: 117 NDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKI 176
+ + + S G WMAPEV+R +D+WS G ++ E+ TG P+ +
Sbjct: 167 H--------RTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF--RG 216
Query: 177 SNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227
+ A +A + P+ + + C P R S +L+
Sbjct: 217 IDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 75/187 (40%), Gaps = 46/187 (24%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR-VNDLKNNGNLKQSWQSIGGTQLW 138
+LH G++H DL N+LL + D+ + D AR D + W +
Sbjct: 148 HVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRW--------Y 199
Query: 139 MAPE-VLRNEGLDFATDIWSLGCMVIEM---------------------ATGRPPWGDKI 176
APE V++ +G D+WS GC++ EM G P D +
Sbjct: 200 RAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVV 259
Query: 177 ---SNAAATLLKIACSNEKPHFPTQFFKKV--------LDFLAKCLERKPEKRWSAEELL 225
S +A L+ + SN P + + V LD +AK LE P++R S E+ L
Sbjct: 260 MFSSPSARDYLRNSLSN----VPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQAL 315
Query: 226 NHTFISG 232
H +
Sbjct: 316 RHPYFES 322
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 75/187 (40%), Gaps = 46/187 (24%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR-VNDLKNNGNLKQSWQSIGGTQLW 138
+LH G++H DL N+LL + D+ + D AR D + W +
Sbjct: 148 HVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRW--------Y 199
Query: 139 MAPE-VLRNEGLDFATDIWSLGCMVIEM---------------------ATGRPPWGDKI 176
APE V++ +G D+WS GC++ EM G P D +
Sbjct: 200 RAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVV 259
Query: 177 ---SNAAATLLKIACSNEKPHFPTQFFKKV--------LDFLAKCLERKPEKRWSAEELL 225
S +A L+ + SN P + + V LD +AK LE P++R S E+ L
Sbjct: 260 MFSSPSARDYLRNSLSN----VPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQAL 315
Query: 226 NHTFISG 232
H +
Sbjct: 316 RHPYFES 322
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 99/220 (45%), Gaps = 24/220 (10%)
Query: 19 GVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI 74
V+A EA + ++L + + ++ + I E+MA GSLLD + G+ +
Sbjct: 53 SVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGS-KQPLP 111
Query: 75 RL--YTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLK 126
+L ++ +I G + H DL+ N+L+ + K+ D G AR + D N
Sbjct: 112 KLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIED-----NEY 166
Query: 127 QSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLK 185
+ + W APE + +D+WS G +++E+ T GR P+ + L+
Sbjct: 167 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE 226
Query: 186 IACSNEKP-HFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
+P + P + + + + +C + +PE+R + E +
Sbjct: 227 RGYRMPRPENCPEELY----NIMMRCWKNRPEERPTFEYI 262
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN---DLKNNGNLKQSWQSIGGTQ 136
E L +H DL N+LL VK+ D G AR + D G+ + +
Sbjct: 214 EFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK------ 267
Query: 137 LWMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPW-GDKISNAAATLLKIACSNEKPH 194
WMAPE + + +D+WS G ++ E+ + G P+ G KI LK P
Sbjct: 268 -WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 326
Query: 195 FPT-QFFKKVLDFLAKCLERKPEKRWSAEELLNH--TFISGNAKKN 237
+ T + ++ +LD C +P +R + EL+ H + NA+++
Sbjct: 327 YTTPEMYQTMLD----CWHGEPSQRPTFSELVEHLGNLLQANAQQD 368
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN---DLKNNGNLKQSWQSIGGTQ 136
E L +H DL N+LL VK+ D G AR + D G+ + +
Sbjct: 199 EFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK------ 252
Query: 137 LWMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPW-GDKISNAAATLLKIACSNEKPH 194
WMAPE + + +D+WS G ++ E+ + G P+ G KI LK P
Sbjct: 253 -WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 311
Query: 195 FPT-QFFKKVLDFLAKCLERKPEKRWSAEELLNH--TFISGNAKKN 237
+ T + ++ +LD C +P +R + EL+ H + NA+++
Sbjct: 312 YTTPEMYQTMLD----CWHGEPSQRPTFSELVEHLGNLLQANAQQD 353
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 115/274 (41%), Gaps = 52/274 (18%)
Query: 2 NKGTGALFVVK---SAESEAGVQ--ALRNEAEIRQSLNSPNIGRNGE-----KTVNIFME 51
N+ TG + +K +E + ++ ALR E + + L PN+ E + +++ E
Sbjct: 24 NRDTGQIVAIKKFLESEDDPVIKKIALR-EIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82
Query: 52 YMAGGSLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDV 105
Y ++L +++ + +++ T + L H + +H D+K N+L+ H +
Sbjct: 83 Y-CDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVI 141
Query: 106 KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR-NEGLDFATDIWSLGCMVIE 164
KL D G AR + + + T+ + +PE+L + D+W++GC+ E
Sbjct: 142 KLCDFGFARLLTGPSD------YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAE 195
Query: 165 MATGRPPWG-----DKISNAAATLLKIACSNEKPHFPTQFFKKV---------------- 203
+ +G P W D++ TL + +++ Q+F V
Sbjct: 196 LLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFP 255
Query: 204 ------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
L L CL P +R + E+LL+H +
Sbjct: 256 NISYPALGLLKGCLHMDPTERLTCEQLLHHPYFE 289
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN---DLKNNGNLKQSWQSIGGTQ 136
E L +H DL N+LL VK+ D G AR + D G+ + +
Sbjct: 212 EFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK------ 265
Query: 137 LWMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPW-GDKISNAAATLLKIACSNEKPH 194
WMAPE + + +D+WS G ++ E+ + G P+ G KI LK P
Sbjct: 266 -WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 324
Query: 195 FPT-QFFKKVLDFLAKCLERKPEKRWSAEELLNH--TFISGNAKKN 237
+ T + ++ +LD C +P +R + EL+ H + NA+++
Sbjct: 325 YTTPEMYQTMLD----CWHGEPSQRPTFSELVEHLGNLLQANAQQD 366
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 2 NKGTGALFVVKSAES-EAGVQAL-------RNEAEIRQSLNSPNI-------GRNGEKT- 45
N G +F K ES E ++ + E +I + + PN+ NG+K
Sbjct: 50 NGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKD 109
Query: 46 ---VNIFMEYMAGGSLLDVAE--KFGGTLDAGVIRLYTKEIL------HGNGILHCDLKC 94
+N+ +EY+ K T+ +I+LY ++L H GI H D+K
Sbjct: 110 EVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKP 169
Query: 95 NNVLLGS-HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFAT 153
N+LL G +KL D G A+ + + N+ S ++ + APE++ ++ T
Sbjct: 170 QNLLLDPPSGVLKLIDFGSAKIL--IAGEPNV-----SXICSRYYRAPELIFG-ATNYTT 221
Query: 154 --DIWSLGCMVIEMATGRP--------------------PWGDKISNAAATLLKIACSNE 191
DIWS GC++ E+ G+P P ++I ++
Sbjct: 222 NIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQI 281
Query: 192 KPHFPTQFFKK-----VLDFLAKCLERKPEKRWSAEELLNHTF 229
+PH ++ F+ +D +++ LE P R +A E L H F
Sbjct: 282 RPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPF 324
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN---DLKNNGNLKQSWQSIGGTQ 136
E L +H DL N+LL VK+ D G AR + D G+ + +
Sbjct: 153 EFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK------ 206
Query: 137 LWMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPW-GDKISNAAATLLKIACSNEKPH 194
WMAPE + + +D+WS G ++ E+ + G P+ G KI LK P
Sbjct: 207 -WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 265
Query: 195 FPT-QFFKKVLDFLAKCLERKPEKRWSAEELLNH--TFISGNAKKN 237
+ T + ++ +LD C +P +R + EL+ H + NA+++
Sbjct: 266 YTTPEMYQTMLD----CWHGEPSQRPTFSELVEHLGNLLQANAQQD 307
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 17/154 (11%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN---DLKNNGNLKQSWQSIGGTQ 136
E L +H DL N+LL VK+ D G AR + D G+ + +
Sbjct: 158 EFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK------ 211
Query: 137 LWMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPW-GDKISNAAATLLKIACSNEKPH 194
WMAPE + + +D+WS G ++ E+ + G P+ G KI LK P
Sbjct: 212 -WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAPD 270
Query: 195 FPT-QFFKKVLDFLAKCLERKPEKRWSAEELLNH 227
+ T + ++ +LD C +P +R + EL+ H
Sbjct: 271 YTTPEMYQTMLD----CWHGEPSQRPTFSELVEH 300
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN---DLKNNGNLKQSWQSIGGTQ 136
E L +H DL N+LL VK+ D G AR + D G+ + +
Sbjct: 153 EFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK------ 206
Query: 137 LWMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPW-GDKISNAAATLLKIACSNEKPH 194
WMAPE + + +D+WS G ++ E+ + G P+ G KI LK P
Sbjct: 207 -WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 265
Query: 195 FPT-QFFKKVLDFLAKCLERKPEKRWSAEELLNH--TFISGNAKKN 237
+ T + ++ +LD C +P +R + EL+ H + NA+++
Sbjct: 266 YTTPEMYQTMLD----CWHGEPSQRPTFSELVEHLGNLLQANAQQD 307
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD-EMTGYVATRW--------YRAP 193
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 311
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN---DLKNNGNLKQSWQSIGGTQ 136
E L +H DL N+LL VK+ D G AR + D G+ + +
Sbjct: 153 EFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK------ 206
Query: 137 LWMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPW-GDKISNAAATLLKIACSNEKPH 194
WMAPE + + +D+WS G ++ E+ + G P+ G KI LK P
Sbjct: 207 -WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 265
Query: 195 FPT-QFFKKVLDFLAKCLERKPEKRWSAEELLNH--TFISGNAKKN 237
+ T + ++ +LD C +P +R + EL+ H + NA+++
Sbjct: 266 YTTPEMYQTMLD----CWHGEPSQRPTFSELVEHLGNLLQANAQQD 307
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN---DLKNNGNLKQSWQSIGGTQ 136
E L +H DL N+LL VK+ D G AR + D G+ + +
Sbjct: 153 EFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK------ 206
Query: 137 LWMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPW-GDKISNAAATLLKIACSNEKPH 194
WMAPE + + +D+WS G ++ E+ + G P+ G KI LK P
Sbjct: 207 -WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 265
Query: 195 FPT-QFFKKVLDFLAKCLERKPEKRWSAEELLNH--TFISGNAKKN 237
+ T + ++ +LD C +P +R + EL+ H + NA+++
Sbjct: 266 YTTPEMYQTMLD----CWHGEPSQRPTFSELVEHLGNLLQANAQQD 307
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 94/219 (42%), Gaps = 22/219 (10%)
Query: 19 GVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFGGT------ 68
V+A EA + ++L + + ++ + I E+MA GSLLD + G+
Sbjct: 226 SVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPK 285
Query: 69 -LDAGVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQ 127
+D + +H DL+ N+L+ + K+ D G AR + D N
Sbjct: 286 LIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIED-----NEYT 340
Query: 128 SWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKI 186
+ + W APE + +D+WS G +++E+ T GR P+ + L+
Sbjct: 341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 400
Query: 187 ACSNEKP-HFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
+P + P + + + + +C + +PE+R + E +
Sbjct: 401 GYRMPRPENCPEELY----NIMMRCWKNRPEERPTFEYI 435
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN---DLKNNGNLKQSWQSIGGTQ 136
E L +H DL N+LL VK+ D G AR + D G+ + +
Sbjct: 162 EFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK------ 215
Query: 137 LWMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPW-GDKISNAAATLLKIACSNEKPH 194
WMAPE + + +D+WS G ++ E+ + G P+ G KI LK P
Sbjct: 216 -WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 274
Query: 195 FPT-QFFKKVLDFLAKCLERKPEKRWSAEELLNH--TFISGNAKKN 237
+ T + ++ +LD C +P +R + EL+ H + NA+++
Sbjct: 275 YTTPEMYQTMLD----CWHGEPSQRPTFSELVEHLGNLLQANAQQD 316
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 37/177 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H G++H DLK N+ + ++K+ D G AR D + G + W + AP
Sbjct: 160 IHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA-DAEMTGYVVTRW--------YRAP 210
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACS---------N 190
EV+ + + DIWS+GC++ EM TG+ + G + +LK+ N
Sbjct: 211 EVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN 270
Query: 191 EK---------PHFP----TQFFKK----VLDFLAKCLERKPEKRWSAEELLNHTFI 230
+K P P TQ F + D L K LE +KR +A + L H F
Sbjct: 271 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 327
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD-EMTGYVATRW--------YRAP 197
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 258 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 315
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN---DLKNNGNLKQSWQSIGGTQ 136
E L +H DL N+LL VK+ D G AR + D G+ + +
Sbjct: 164 EFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK------ 217
Query: 137 LWMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPW-GDKISNAAATLLKIACSNEKPH 194
WMAPE + + +D+WS G ++ E+ + G P+ G KI LK P
Sbjct: 218 -WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 276
Query: 195 FPT-QFFKKVLDFLAKCLERKPEKRWSAEELLNH--TFISGNAKKN 237
+ T + ++ +LD C +P +R + EL+ H + NA+++
Sbjct: 277 YTTPEMYQTMLD----CWHGEPSQRPTFSELVEHLGNLLQANAQQD 318
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 20/181 (11%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDV 61
A+ +K +E + EA I + PNI R K V I EYM GSL
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136
Query: 62 AEKFGGTLDA----GVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115
K G++R + L G +H DL N+L+ S+ K+ D G AR
Sbjct: 137 LRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARV 196
Query: 116 VNDLKNNGNLKQSWQSIGG--TQLWMAPEVLRNEGLDFATDIWSLGCMVIE-MATG-RPP 171
+ D + + ++ + GG W +PE + A+D+WS G ++ E M+ G RP
Sbjct: 197 LED-----DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 172 W 172
W
Sbjct: 252 W 252
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 107/265 (40%), Gaps = 48/265 (18%)
Query: 7 ALFVVKSAESEAGV--QALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ + + GV ALR E + + L NI R + +K + + E+ L
Sbjct: 31 ALKRVRLDDDDEGVPSSALR-EICLLKELKHKNIVRLHDVLHSDKKLTLVFEF-CDQDLK 88
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+ G LD +++ + ++L H +LH DLK N+L+ +G++KL D G A
Sbjct: 89 KYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLA 148
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGL-DFATDIWSLGCMVIEMATGRPP- 171
R G + + + T + P+VL L + D+WS GC+ E+A P
Sbjct: 149 RAF------GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
Query: 172 ----------------WGDKISNAAATLLKIACSNEKPHFP-TQFFKKVL--------DF 206
G ++ K+ P +P T V+ D
Sbjct: 203 FPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDL 262
Query: 207 LAKCLERKPEKRWSAEELLNHTFIS 231
L L+ P +R SAEE L H + S
Sbjct: 263 LQNLLKCNPVQRISAEEALQHPYFS 287
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN---DLKNNGNLKQSWQSIGGTQ 136
E L +H DL N+LL VK+ D G AR + D G+ + +
Sbjct: 162 EFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK------ 215
Query: 137 LWMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPW-GDKISNAAATLLKIACSNEKPH 194
WMAPE + + +D+WS G ++ E+ + G P+ G KI LK P
Sbjct: 216 -WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 274
Query: 195 FPT-QFFKKVLDFLAKCLERKPEKRWSAEELLNH--TFISGNAKKN 237
+ T + ++ +LD C +P +R + EL+ H + NA+++
Sbjct: 275 YTTPEMYQTMLD----CWHGEPSQRPTFSELVEHLGNLLQANAQQD 316
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD-EMTGYVATRW--------YRAP 191
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 37/177 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H G++H DLK N+ + ++K+ D G AR D + G + W + AP
Sbjct: 142 IHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA-DAEMTGYVVTRW--------YRAP 192
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACS---------N 190
EV+ + + DIWS+GC++ EM TG+ + G + +LK+ N
Sbjct: 193 EVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN 252
Query: 191 EK---------PHFP----TQFFKK----VLDFLAKCLERKPEKRWSAEELLNHTFI 230
+K P P TQ F + D L K LE +KR +A + L H F
Sbjct: 253 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 152 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD-EMTGYVATRW--------YRAP 202
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 262
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 263 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 320
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H GI+H DLK +NV + ++++ D G AR+ ++ + G + W + AP
Sbjct: 139 IHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADE-EMTGYVATRW--------YRAP 189
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN-----------AAATLLKIA 187
E++ N + DIWS+GC++ E+ G+ P D I + L KI+
Sbjct: 190 EIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKIS 249
Query: 188 CSNEK------PHFPTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
+ + P P + + +D L + L ++R SA E L H + S
Sbjct: 250 SEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFS 307
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 78/188 (41%), Gaps = 45/188 (23%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR + N + + T+ + AP
Sbjct: 140 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAS-----TNFMMTPYVV--TRYYRAP 192
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATGR---------PPWGDKI------SNAAATLLKI 186
EV+ G DIWS+GC++ E+ G W I S L+
Sbjct: 193 EVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQP 252
Query: 187 ACSN---EKPHFPTQFFKKVL--------------------DFLAKCLERKPEKRWSAEE 223
N +P +P F+++ D L+K L P+KR S +E
Sbjct: 253 TVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDE 312
Query: 224 LLNHTFIS 231
L H +I+
Sbjct: 313 ALRHPYIT 320
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN---DLKNNGNLKQSWQSIGGTQ 136
E L +H DL N+LL VK+ D G AR + D G+ + +
Sbjct: 162 EFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK------ 215
Query: 137 LWMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPW-GDKISNAAATLLKIACSNEKPH 194
WMAPE + + +D+WS G ++ E+ + G P+ G KI LK P
Sbjct: 216 -WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 274
Query: 195 FPT-QFFKKVLDFLAKCLERKPEKRWSAEELLNH--TFISGNAKKN 237
+ T + ++ +LD C +P +R + EL+ H + NA+++
Sbjct: 275 YTTPEMYQTMLD----CWHGEPSQRPTFSELVEHLGNLLQANAQQD 316
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 29/217 (13%)
Query: 19 GVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDV--AEKFGGTLDA 71
VQA EA + ++L + R E+ + I E+MA GSLLD +++ G L
Sbjct: 50 SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLP 109
Query: 72 GVIRLYTKEILHG------NGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNL 125
+I ++ +I G +H DL+ NVL+ K+ D G AR + D N
Sbjct: 110 KLID-FSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIED-----NE 163
Query: 126 KQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLL 184
+ + W APE + +++WS G ++ E+ T G+ P+ + + A +
Sbjct: 164 YTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTN--ADVMS 221
Query: 185 KIACSNEKPHF---PTQFFKKVLDFLAKCLERKPEKR 218
++ P P + + D + C + K E+R
Sbjct: 222 ALSQGYRMPRMENCPDELY----DIMKMCWKEKAEER 254
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD-EMTGYVATRW--------YRAP 196
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 314
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 191
Query: 142 EVLRNE-GLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 192 EIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD-EMTGYVATRW--------YRAP 196
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 314
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 110/265 (41%), Gaps = 48/265 (18%)
Query: 7 ALFVVKSAESEAGV--QALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLL 59
AL V+ + + GV ALR E + + L NI R + +K + + E+ L
Sbjct: 31 ALKRVRLDDDDEGVPSSALR-EICLLKELKHKNIVRLHDVLHSDKKLTLVFEF-CDQDLK 88
Query: 60 DVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113
+ G LD +++ + ++L H +LH DLK N+L+ +G++KL + G A
Sbjct: 89 KYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLA 148
Query: 114 RRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGL-DFATDIWSLGCMVIEMA-TGRPP 171
R G + + + T + P+VL L + D+WS GC+ E+A GRP
Sbjct: 149 RAF------GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
Query: 172 W----------------GDKISNAAATLLKIACSNEKPHFP-TQFFKKVL--------DF 206
+ G ++ K+ P +P T V+ D
Sbjct: 203 FPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDL 262
Query: 207 LAKCLERKPEKRWSAEELLNHTFIS 231
L L+ P +R SAEE L H + S
Sbjct: 263 LQNLLKCNPVQRISAEEALQHPYFS 287
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN---DLKNNGNLKQSWQSIGGTQ 136
E L +H DL N+LL VK+ D G AR + D G+ + +
Sbjct: 162 EFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLK------ 215
Query: 137 LWMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPW-GDKISNAAATLLKIACSNEKPH 194
WMAPE + + +D+WS G ++ E+ + G P+ G KI LK P
Sbjct: 216 -WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 274
Query: 195 FPT-QFFKKVLDFLAKCLERKPEKRWSAEELLNH--TFISGNAKKN 237
+ T + ++ +LD C +P +R + EL+ H + NA+++
Sbjct: 275 YTTPEMYQTMLD----CWHGEPSQRPTFSELVEHLGNLLQANAQQD 316
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN---DLKNNGNLKQSWQSIGGTQ 136
E L +H DL N+LL VK+ D G AR + D G+ + +
Sbjct: 162 EFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK------ 215
Query: 137 LWMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPW-GDKISNAAATLLKIACSNEKPH 194
WMAPE + + +D+WS G ++ E+ + G P+ G KI LK P
Sbjct: 216 -WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 274
Query: 195 FPT-QFFKKVLDFLAKCLERKPEKRWSAEELLNH--TFISGNAKKN 237
+ T + ++ +LD C +P +R + EL+ H + NA+++
Sbjct: 275 YTTPEMYQTMLD----CWHGEPSQRPTFSELVEHLGNLLQANAQQD 316
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 17/154 (11%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN---DLKNNGNLKQSWQSIGGTQ 136
E L +H DL N+LL VK+ D G AR + D G+ + +
Sbjct: 205 EFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK------ 258
Query: 137 LWMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPW-GDKISNAAATLLKIACSNEKPH 194
WMAPE + + +D+WS G ++ E+ + G P+ G KI LK P
Sbjct: 259 -WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 317
Query: 195 FPT-QFFKKVLDFLAKCLERKPEKRWSAEELLNH 227
+ T + ++ +LD C +P +R + EL+ H
Sbjct: 318 YTTPEMYQTMLD----CWHGEPSQRPTFSELVEH 347
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 42/222 (18%)
Query: 45 TVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVL 98
+V I EYM L +V E+ G L RL+ ++L H +LH DLK N+
Sbjct: 96 SVYIVQEYMET-DLANVLEQ--GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLF 152
Query: 99 LGSHGDV-KLPDLGCARRVN-DLKNNGNLKQSWQSIGGTQLWMAPEVLRNEG-LDFATDI 155
+ + V K+ D G AR ++ + G+L + T+ + +P +L + A D+
Sbjct: 153 INTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV----TKWYRSPRLLLSPNNYTKAIDM 208
Query: 156 WSLGCMVIEMATGR-------------------PPWGDKISNAAATLLKIACSNE--KPH 194
W+ GC+ EM TG+ P ++ +++ + N+ +PH
Sbjct: 209 WAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPH 268
Query: 195 FP-TQFF----KKVLDFLAKCLERKPEKRWSAEELLNHTFIS 231
P TQ ++ +DFL + L P R +AEE L+H ++S
Sbjct: 269 KPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMS 310
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 85/207 (41%), Gaps = 49/207 (23%)
Query: 74 IRLYTKEIL------HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLK 126
IR Y E+L H GI+H D+K +NV++ ++L D G A +
Sbjct: 134 IRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHP-------A 186
Query: 127 QSWQSIGGTQLWMAPEVLRNEGL-DFATDIWSLGCMVIEMATGRPPW------GDKISNA 179
Q + ++ + PE+L + + D++ D+WSLGCM+ M R P+ D++
Sbjct: 187 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRI 246
Query: 180 AATL--------LKIACSNEKPHFPT---QFFKK-----------------VLDFLAKCL 211
A L LK + PHF Q +K LD L K L
Sbjct: 247 AKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLL 306
Query: 212 ERKPEKRWSAEELLNHTFISGNAKKNS 238
++R +A+E + H + K+ S
Sbjct: 307 RYDHQQRLTAKEAMEHPYFYPVVKEQS 333
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 19/164 (11%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN---DLKNNGNLKQSWQSIGGTQ 136
E L +H DL N+LL VK+ D G AR + D G+ + +
Sbjct: 207 EFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK------ 260
Query: 137 LWMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPW-GDKISNAAATLLKIACSNEKPH 194
WMAPE + + +D+WS G ++ E+ + G P+ G KI LK P
Sbjct: 261 -WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 319
Query: 195 FPT-QFFKKVLDFLAKCLERKPEKRWSAEELLNH--TFISGNAK 235
+ T + ++ +LD C +P +R + EL+ H + NA+
Sbjct: 320 YTTPEMYQTMLD----CWHGEPSQRPTFSELVEHLGNLLQANAQ 359
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 20/181 (11%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDV 61
A+ +K +E + EA I + PNI R K V I EYM GSL
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136
Query: 62 AEKFGGTLDA----GVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115
K G++R + L G +H DL N+L+ S+ K+ D G +R
Sbjct: 137 LRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 116 VNDLKNNGNLKQSWQSIGG--TQLWMAPEVLRNEGLDFATDIWSLGCMVIE-MATG-RPP 171
+ D + + ++ + GG W +PE + A+D+WS G ++ E M+ G RP
Sbjct: 197 LED-----DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 172 W 172
W
Sbjct: 252 W 252
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 85/207 (41%), Gaps = 49/207 (23%)
Query: 74 IRLYTKEIL------HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLK 126
IR Y E+L H GI+H D+K +NV++ ++L D G A +
Sbjct: 139 IRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHP-------A 191
Query: 127 QSWQSIGGTQLWMAPEVLRNEGL-DFATDIWSLGCMVIEMATGRPPW------GDKISNA 179
Q + ++ + PE+L + + D++ D+WSLGCM+ M R P+ D++
Sbjct: 192 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRI 251
Query: 180 AATL--------LKIACSNEKPHFPT---QFFKK-----------------VLDFLAKCL 211
A L LK + PHF Q +K LD L K L
Sbjct: 252 AKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLL 311
Query: 212 ERKPEKRWSAEELLNHTFISGNAKKNS 238
++R +A+E + H + K+ S
Sbjct: 312 RYDHQQRLTAKEAMEHPYFYPVVKEQS 338
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 108/256 (42%), Gaps = 35/256 (13%)
Query: 1 MNKGTGALFVVKSAE-----SEAGV--QALRNEAEIRQSLNSPNI-----GRNGEKTVNI 48
+N+ TG F VK + S G+ + L+ EA I L P+I + + + +
Sbjct: 44 INRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103
Query: 49 FMEYMAGGSL-LDVAEKF--GGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLL 99
E+M G L ++ ++ G V Y ++IL H N I+H D+K + VLL
Sbjct: 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLL 163
Query: 100 GSH---GDVKLPDLGCARRVND--LKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATD 154
S VKL G A ++ + L G + GT +MAPEV++ E D
Sbjct: 164 ASKENSAPVKLGGFGVAIQLGESGLVAGGRV--------GTPHFMAPEVVKREPYGKPVD 215
Query: 155 IWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERK 214
+W G ++ + +G P+ ++K P + + D + + L
Sbjct: 216 VWGCGVILFILLSGCLPFYGTKERLFEGIIK-GKYKMNPRQWSHISESAKDLVRRMLMLD 274
Query: 215 PEKRWSAEELLNHTFI 230
P +R + E LNH ++
Sbjct: 275 PAERITVYEALNHPWL 290
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 71/187 (37%), Gaps = 45/187 (24%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR T+ + AP
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR-------TAGTSFMMTPYVVTRYYRAP 194
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATG-----------------------RPPWGDKISN 178
EV+ G DIWS+GC++ EM G P + K+
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 179 AAATLL----KIACSNEKPHFPTQFF-----------KKVLDFLAKCLERKPEKRWSAEE 223
T + K A + + FP F + D L+K L KR S +E
Sbjct: 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314
Query: 224 LLNHTFI 230
L H +I
Sbjct: 315 ALQHPYI 321
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 96/223 (43%), Gaps = 35/223 (15%)
Query: 48 IFMEYMAGGSLLDVAEK--FGGTLDAGVIRLYTK---EILHGNGILHCDLKCNNVLL--- 99
+ E M GGS+L K L+A V+ + LH GI H DLK N+L
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHP 147
Query: 100 GSHGDVKLPDLGCARRVNDLKNNGNLK----QSWQSIGGTQLWMAPEVLRNEG-----LD 150
VK+ D G + +K NG+ + G+ +MAPEV+ D
Sbjct: 148 NQVSPVKICDFGLG---SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYD 204
Query: 151 FATDIWSLGCMVIEMATGRPPWGDKISN-----------AAATLLKIACSNEKPHFPTQF 199
D+WSLG ++ + +G PP+ + + A +L + K FP +
Sbjct: 205 KRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKD 264
Query: 200 FKKVL----DFLAKCLERKPEKRWSAEELLNHTFISGNAKKNS 238
+ + D ++K L R ++R SA ++L H ++ G A +N+
Sbjct: 265 WAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENT 307
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 13/115 (11%)
Query: 56 GSLLDVAEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115
G L + KF ++ L + LH N I+HCDLK N+LL G + +
Sbjct: 196 GFSLPLVRKFAHSI------LQCLDALHKNRIIHCDLKPENILLKQQGRSGI-------K 242
Query: 116 VNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRP 170
V D ++ Q + ++ + APEV+ D+WSLGC++ E+ TG P
Sbjct: 243 VIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYP 297
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 204 LDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
LDFL +CLE P R + + L H ++ K T E
Sbjct: 386 LDFLKQCLEWDPAVRMTPGQALRHPWLRRRLPKPPTGE 423
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 101/266 (37%), Gaps = 40/266 (15%)
Query: 1 MNKGTGALFVVKSAESEAGVQALRNEAEIR-QSLNSPNIGR---------NGEKTVNIFM 50
NK T F +K + R E E+ ++ P+I R G K + I
Sbjct: 82 FNKRTQEKFALKXLQD---CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVX 138
Query: 51 EYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI----------LHGNGILHCDLKCNNVLLG 100
E + GG L + G D EI LH I H D+K N+L
Sbjct: 139 ECLDGGELFSRIQDRG---DQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYT 195
Query: 101 S---HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWS 157
S + +KL D G A+ S + T ++APEVL E D + D WS
Sbjct: 196 SKRPNAILKLTDFGFAKETTS-------HNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWS 248
Query: 158 LGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP----TQFFKKVLDFLAKCLER 213
LG + + G PP+ A + K + FP ++ ++V + L+
Sbjct: 249 LGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEEVKXLIRNLLKT 308
Query: 214 KPEKRWSAEELLNHTFISGNAKKNST 239
+P +R + E NH +I + K T
Sbjct: 309 EPTQRXTITEFXNHPWIXQSTKVPQT 334
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 108/256 (42%), Gaps = 35/256 (13%)
Query: 1 MNKGTGALFVVKSAE-----SEAGV--QALRNEAEIRQSLNSPNI-----GRNGEKTVNI 48
+N+ TG F VK + S G+ + L+ EA I L P+I + + + +
Sbjct: 46 INRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 105
Query: 49 FMEYMAGGSL-LDVAEKF--GGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLL 99
E+M G L ++ ++ G V Y ++IL H N I+H D+K + VLL
Sbjct: 106 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLL 165
Query: 100 GSH---GDVKLPDLGCARRVND--LKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATD 154
S VKL G A ++ + L G + GT +MAPEV++ E D
Sbjct: 166 ASKENSAPVKLGGFGVAIQLGESGLVAGGRV--------GTPHFMAPEVVKREPYGKPVD 217
Query: 155 IWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERK 214
+W G ++ + +G P+ ++K P + + D + + L
Sbjct: 218 VWGCGVILFILLSGCLPFYGTKERLFEGIIK-GKYKMNPRQWSHISESAKDLVRRMLMLD 276
Query: 215 PEKRWSAEELLNHTFI 230
P +R + E LNH ++
Sbjct: 277 PAERITVYEALNHPWL 292
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 191
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 203
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 263
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 264 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 321
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 203
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 263
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 264 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 321
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 203
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 263
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 264 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 321
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 17/154 (11%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN---DLKNNGNLKQSWQSIGGTQ 136
E L +H DL N+LL VK+ D G AR + D G+ + +
Sbjct: 158 EFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK------ 211
Query: 137 LWMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPW-GDKISNAAATLLKIACSNEKPH 194
WMAPE + + +D+WS G ++ E+ + G P+ G KI LK P
Sbjct: 212 -WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 270
Query: 195 FPT-QFFKKVLDFLAKCLERKPEKRWSAEELLNH 227
+ T + ++ +LD C +P +R + EL+ H
Sbjct: 271 YTTPEMYQTMLD----CWHGEPSQRPTFSELVEH 300
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 152 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 202
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 262
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 263 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 320
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 20/181 (11%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDV 61
A+ +K +E + EA I + PNI R K V I EYM GSL
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136
Query: 62 AEKFGGTLDA----GVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115
K G++R + L G +H DL N+L+ S+ K+ D G +R
Sbjct: 137 LRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 116 VNDLKNNGNLKQSWQSIGG--TQLWMAPEVLRNEGLDFATDIWSLGCMVIE-MATG-RPP 171
+ D + + ++ + GG W +PE + A+D+WS G ++ E M+ G RP
Sbjct: 197 LED-----DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 172 W 172
W
Sbjct: 252 W 252
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 13/115 (11%)
Query: 56 GSLLDVAEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115
G L + KF ++ L + LH N I+HCDLK N+LL G + +
Sbjct: 196 GFSLPLVRKFAHSI------LQCLDALHKNRIIHCDLKPENILLKQQGRSGI-------K 242
Query: 116 VNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRP 170
V D ++ Q + ++ + APEV+ D+WSLGC++ E+ TG P
Sbjct: 243 VIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYP 297
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 193
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 311
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 109/235 (46%), Gaps = 50/235 (21%)
Query: 44 KTVNIFMEYMAGGSLLDVAEKF---GGTLDAGVIRLYTKEI------LHGNGILHCDLKC 94
K +N+ MEY+ +L V + F G ++ +I +Y ++ +H GI H D+K
Sbjct: 111 KYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKP 169
Query: 95 NNVLLGSHGD-VKLPDLGCARRVNDLKNNGNLKQSWQSIGG--TQLWMAPEVLRNEG-LD 150
N+L+ S + +KL D G A++ L S S+ ++ + APE++
Sbjct: 170 QNLLVNSKDNTLKLCDFGSAKK---------LIPSEPSVAXICSRFYRAPELMLGATEYT 220
Query: 151 FATDIWSLGCMVIEMATGRPPWGDKIS-NAAATLLKIACSNEK-------PH-----FPT 197
+ D+WS+GC+ E+ G+P + + S + +++I + K PH FPT
Sbjct: 221 PSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPT 280
Query: 198 ---QFFKKVL---------DFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTE 240
+ ++K+L D L + L +P+ R + E + H F + +NS E
Sbjct: 281 LKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFF--DHLRNSYE 333
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 20/181 (11%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDV 61
A+ +K +E + EA I + PNI R K V I EYM GSL
Sbjct: 75 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 134
Query: 62 AEKFGGTLDA----GVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115
K G++R + L G +H DL N+L+ S+ K+ D G +R
Sbjct: 135 LRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 194
Query: 116 VNDLKNNGNLKQSWQSIGG--TQLWMAPEVLRNEGLDFATDIWSLGCMVIE-MATG-RPP 171
+ D + + ++ + GG W +PE + A+D+WS G ++ E M+ G RP
Sbjct: 195 LED-----DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 249
Query: 172 W 172
W
Sbjct: 250 W 250
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 193
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 311
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 71/187 (37%), Gaps = 45/187 (24%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR T+ + AP
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR-------TAGTSFMMTPYVVTRYYRAP 194
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATG-----------------------RPPWGDKISN 178
EV+ G DIWS+GC++ EM G P + K+
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 179 AAATLL----KIACSNEKPHFPTQFF-----------KKVLDFLAKCLERKPEKRWSAEE 223
T + K A + + FP F + D L+K L KR S +E
Sbjct: 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314
Query: 224 LLNHTFI 230
L H +I
Sbjct: 315 ALQHPYI 321
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 197
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 258 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 315
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 164 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMXGYVATRW--------YRAP 214
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 274
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 275 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 332
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 191
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 20/181 (11%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDV 61
A+ +K +E + EA I + PNI R K V I EYM GSL
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136
Query: 62 AEKFGGTLDA----GVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115
K G++R + L G +H DL N+L+ S+ K+ D G +R
Sbjct: 137 LRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 116 VNDLKNNGNLKQSWQSIGG--TQLWMAPEVLRNEGLDFATDIWSLGCMVIE-MATG-RPP 171
+ D + + ++ + GG W +PE + A+D+WS G ++ E M+ G RP
Sbjct: 197 LED-----DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 172 W 172
W
Sbjct: 252 W 252
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 20/181 (11%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDV 61
A+ +K +E + EA I + PNI R K V I EYM GSL
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136
Query: 62 AEKFGGTLDA----GVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115
K G++R + L G +H DL N+L+ S+ K+ D G +R
Sbjct: 137 LRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 116 VNDLKNNGNLKQSWQSIGG--TQLWMAPEVLRNEGLDFATDIWSLGCMVIE-MATG-RPP 171
+ D + + ++ + GG W +PE + A+D+WS G ++ E M+ G RP
Sbjct: 197 LED-----DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 172 W 172
W
Sbjct: 252 W 252
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 20/181 (11%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDV 61
A+ +K +E + EA I + PNI R K V I EYM GSL
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136
Query: 62 AEKFGGTLDA----GVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115
K G++R + L G +H DL N+L+ S+ K+ D G +R
Sbjct: 137 LRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 116 VNDLKNNGNLKQSWQSIGG--TQLWMAPEVLRNEGLDFATDIWSLGCMVIE-MATG-RPP 171
+ D + + ++ + GG W +PE + A+D+WS G ++ E M+ G RP
Sbjct: 197 LED-----DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 172 W 172
W
Sbjct: 252 W 252
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 164 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 214
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 274
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 275 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 332
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 198
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 316
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 160 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 210
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 270
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 271 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 328
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 160 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 210
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 270
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 271 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 328
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 211
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 271
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 272 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 329
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 211
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 271
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 272 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 329
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 193
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 311
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 151 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 201
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 202 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 261
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 262 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 319
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 196
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 314
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 191
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 252 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 140 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 190
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 191 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 250
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 251 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 308
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 191
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGXVATRW--------YRAP 191
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 191
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 191
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 191
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 17/153 (11%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL-- 137
E L +H DL N+LL + VK+ D G AR + KN +++ G T+L
Sbjct: 213 EFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDI--YKNPDYVRK-----GDTRLPL 265
Query: 138 -WMAPEVLRNEGLDFATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKIACSNEKPH 194
WMAPE + ++ +D+WS G ++ E+ + G P G ++ + L+ P
Sbjct: 266 KWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRMRAPE 325
Query: 195 FPT-QFFKKVLDFLAKCLERKPEKRWSAEELLN 226
+ T + ++ +LD C R P++R EL+
Sbjct: 326 YSTPEIYQIMLD----CWHRDPKERPRFAELVE 354
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 16/159 (10%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR T+ + AP
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR-------TAGTSFMMTPYVVTRYYRAP 194
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATG--RPPWGDKISNAAATLLKIACSNEKPHFPTQF 199
EV+ G DIWS+GC++ EM G P D I + ++ + +F
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS------PEF 248
Query: 200 FKKVLDFLAKCLERKPEKR-WSAEELLNHTFISGNAKKN 237
KK+ + +E +P+ +S E+L +++ N
Sbjct: 249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHN 287
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 196
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 314
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 191
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 191
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 138 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 188
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 248
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 249 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 306
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 20/181 (11%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDV 61
A+ +K +E + EA I + PNI R K V I EYM GSL
Sbjct: 65 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 124
Query: 62 AEKFGGTLDA----GVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115
K G++R + L G +H DL N+L+ S+ K+ D G +R
Sbjct: 125 LRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 184
Query: 116 VNDLKNNGNLKQSWQSIGG--TQLWMAPEVLRNEGLDFATDIWSLGCMVIE-MATG-RPP 171
+ D + + ++ + GG W +PE + A+D+WS G ++ E M+ G RP
Sbjct: 185 LED-----DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 239
Query: 172 W 172
W
Sbjct: 240 W 240
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 139 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 189
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 190 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 249
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 250 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 307
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 138 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 188
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 248
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 249 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 306
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 187
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 248 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 305
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 187
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 248 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 305
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 33/220 (15%)
Query: 30 RQSLNSPNIGRNGEKTVNIFMEYMAGGSLLDV--AEKFGGTLDAGVIRLYTK-----EIL 82
R++ P + T+ I MEY G+L D+ +E D RL+ + +
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE-YWRLFRQILEALSYI 132
Query: 83 HGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN--------DLKNNGNLKQSWQSIGG 134
H GI+H DLK N+ + +VK+ D G A+ V+ D +N + S G
Sbjct: 133 HSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIG 192
Query: 135 TQLWMAPEVLRNEG-LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
T +++A EVL G + D++SLG + EM +++ N L ++
Sbjct: 193 TAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERV-NILKKLRSVSIE---- 247
Query: 194 HFPTQF-------FKKVLDFLAKCLERKPEKRWSAEELLN 226
FP F KK++ L ++ P KR A LLN
Sbjct: 248 -FPPDFDDNKMKVEKKIIRLL---IDHDPNKRPGARTLLN 283
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 187
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 248 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 305
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 82/199 (41%), Gaps = 36/199 (18%)
Query: 24 RNEAEIRQSLNSPNI---------GRNGEKTVNIFMEYMAGGSLLDVAEKFGGT------ 68
+ EA++ + N PNI R + + + + G+L + E+
Sbjct: 74 QREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTE 133
Query: 69 -----LDAGVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNG 123
L G+ R E +H G H DLK N+LLG G L DLG + + G
Sbjct: 134 DQILWLLLGICR--GLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQAC-IHVEG 190
Query: 124 NLK----QSWQSIGGTQLWMAPEVLRNEG---LDFATDIWSLGCMVIEMATGRPPW---- 172
+ + Q W + T + APE+ + +D TD+WSLGC++ M G P+
Sbjct: 191 SRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVF 250
Query: 173 --GDKISNAAATLLKIACS 189
GD ++ A L I S
Sbjct: 251 QKGDSVALAVQNQLSIPQS 269
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 20/181 (11%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDV 61
A+ +K +E + EA I + PNI R K V I EYM GSL
Sbjct: 48 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 107
Query: 62 AEKFGGTLDA----GVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115
K G++R + L G +H DL N+L+ S+ K+ D G +R
Sbjct: 108 LRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 167
Query: 116 VNDLKNNGNLKQSWQSIGG--TQLWMAPEVLRNEGLDFATDIWSLGCMVIE-MATG-RPP 171
+ D + + ++ + GG W +PE + A+D+WS G ++ E M+ G RP
Sbjct: 168 LED-----DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 222
Query: 172 W 172
W
Sbjct: 223 W 223
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 197
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 258 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 315
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMXGXVATRW--------YRAP 211
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 271
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 272 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 329
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 49 FMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI--LHGNGILHCDLKCNNVLLGSHGDVK 106
F E+ G L +V KF + V+++ + +H N ILH D+K NVL+ G +K
Sbjct: 106 FCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLK 165
Query: 107 LPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDF--ATDIWSLGCMVIE 164
L D G AR + KN+ + + + T + PE+L E D+ D+W GC++ E
Sbjct: 166 LADFGLARAFSLAKNSQPNRYXNRVV--TLWYRPPELLLGER-DYGPPIDLWGAGCIMAE 222
Query: 165 MATGRPPWGDKISNAAATLLKIACSNEKPH-FPT----QFFKKV---------------- 203
M T P L+ C + P +P + ++K+
Sbjct: 223 MWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKA 282
Query: 204 -------LDFLAKCLERKPEKRWSAEELLNHTFI 230
LD + K L P +R +++ LNH F
Sbjct: 283 YVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 25 NEAEIRQSLNSP-NIGRNGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI-- 81
N EI ++ SP N + V F E+ G L +V KF + V+++ +
Sbjct: 81 NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H N ILH D+K NVL+ G +KL D G AR + KN+ + + + T + P
Sbjct: 141 IHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV--TLWYRPP 198
Query: 142 EVLRNEGLDF--ATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPH-FPT- 197
E+L E D+ D+W GC++ EM T P L+ C + P +P
Sbjct: 199 ELLLGER-DYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNV 257
Query: 198 ---QFFKKV-----------------------LDFLAKCLERKPEKRWSAEELLNHTFI 230
+ ++K+ LD + K L P +R +++ LNH F
Sbjct: 258 DNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 78/194 (40%), Gaps = 24/194 (12%)
Query: 43 EKTVNIFMEYMAGGSLLDV-------AEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCN 95
E+ + I EYM GSLLD A K +D + +H DL+
Sbjct: 75 EEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSA 134
Query: 96 NVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDI 155
N+L+G+ K+ D G AR + D N + Q W APE +D+
Sbjct: 135 NILVGNGLICKIADFGLARLIED-----NEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 156 WSLGCMVIEMAT-GRPPW----GDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKC 210
WS G ++ E+ T GR P+ ++ ++ C + P + + + C
Sbjct: 190 WSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCP-------ISLHELMIHC 242
Query: 211 LERKPEKRWSAEEL 224
++ PE+R + E L
Sbjct: 243 WKKDPEERPTFEYL 256
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMTGYVATRW--------YRAP 197
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 258 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 315
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDD-EMTGYVATRW--------YRAP 191
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 13/115 (11%)
Query: 56 GSLLDVAEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115
G L + KF ++ L + LH N I+HCDLK N+LL G + +
Sbjct: 196 GFSLPLVRKFAHSI------LQCLDALHKNRIIHCDLKPENILLKQQGRSGI-------K 242
Query: 116 VNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRP 170
V D ++ Q ++ + APEV+ D+WSLGC++ E+ TG P
Sbjct: 243 VIDFGSSCYEHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYP 297
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 204 LDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
LDFL +CLE P R + + L H ++ K T E
Sbjct: 386 LDFLKQCLEWDPAVRMTPGQALRHPWLRRRLPKPPTGE 423
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 77/181 (42%), Gaps = 20/181 (11%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDV 61
A+ +K +E + EA I + PNI R K V I EYM GSL
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136
Query: 62 AEKFGGTLDA----GVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115
K G++R + L G +H DL N+L+ S+ K+ D G R
Sbjct: 137 LRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRV 196
Query: 116 VNDLKNNGNLKQSWQSIGG--TQLWMAPEVLRNEGLDFATDIWSLGCMVIE-MATG-RPP 171
+ D + + ++ + GG W +PE + A+D+WS G ++ E M+ G RP
Sbjct: 197 LED-----DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 172 W 172
W
Sbjct: 252 W 252
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 105/272 (38%), Gaps = 58/272 (21%)
Query: 20 VQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLD-------------- 60
V+ ++ E + + L+ PNI R E+ + + ME GG LLD
Sbjct: 72 VERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCA 131
Query: 61 ---------------------VAEKFGGTLD--------AGVIR--LYTKEILHGNGILH 89
F +LD + ++R LH GI H
Sbjct: 132 MDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICH 191
Query: 90 CDLKCNNVLLGSHG--DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR-- 145
D+K N L ++ ++KL D G ++ L NNG + GT ++APEVL
Sbjct: 192 RDIKPENFLFSTNKSFEIKLVDFGLSKEFYKL-NNGEY-YGMTTKAGTPYFVAPEVLNTT 249
Query: 146 NEGLDFATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQFFKKVL 204
NE D WS G ++ + G P+ G ++ + +L E P++
Sbjct: 250 NESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNV-LSPLAR 308
Query: 205 DFLAKCLERKPEKRWSAEELLNHTFISGNAKK 236
D L+ L R ++R+ A L H +IS + K
Sbjct: 309 DLLSNLLNRNVDERFDAMRALQHPWISQFSDK 340
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 49 FMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI--LHGNGILHCDLKCNNVLLGSHGDVK 106
F E+ G L +V KF + V+++ + +H N ILH D+K NVL+ G +K
Sbjct: 106 FCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLK 165
Query: 107 LPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDF--ATDIWSLGCMVIE 164
L D G AR + KN+ + + + T + PE+L E D+ D+W GC++ E
Sbjct: 166 LADFGLARAFSLAKNSQPNRYXNRVV--TLWYRPPELLLGER-DYGPPIDLWGAGCIMAE 222
Query: 165 MATGRPPWGDKISNAAATLLKIACSNEKPH-FPT----QFFKKV---------------- 203
M T P L+ C + P +P + ++K+
Sbjct: 223 MWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKA 282
Query: 204 -------LDFLAKCLERKPEKRWSAEELLNHTFI 230
LD + K L P +R +++ LNH F
Sbjct: 283 YVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 75/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G R +D + G + W + AP
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDD-EMTGYVATRW--------YRAP 191
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 25 NEAEIRQSLNSP-NIGRNGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI-- 81
N EI ++ SP N + V F E+ G L +V KF + V+++ +
Sbjct: 80 NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 139
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H N ILH D+K NVL+ G +KL D G AR + KN+ + + + T + P
Sbjct: 140 IHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV--TLWYRPP 197
Query: 142 EVLRNEGLDF--ATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPH-FPT- 197
E+L E D+ D+W GC++ EM T P L+ C + P +P
Sbjct: 198 ELLLGER-DYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNV 256
Query: 198 ---QFFKKV-----------------------LDFLAKCLERKPEKRWSAEELLNHTFI 230
+ ++K+ LD + K L P +R +++ LNH F
Sbjct: 257 DNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 315
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 16/158 (10%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL---- 137
L +H DL N L+G++ VK+ D G +R V + +GG +
Sbjct: 149 LASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDV--------YSTDYYRVGGHTMLPIR 200
Query: 138 WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFP 196
WM PE + +D+WS G ++ E+ T G+ PW + + E+P
Sbjct: 201 WMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVC 260
Query: 197 TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNA 234
K+V D + C +R+P++R + +E+ G A
Sbjct: 261 P---KEVYDVMLGCWQREPQQRLNIKEIYKILHALGKA 295
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 20/181 (11%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDV 61
A+ +K +E + EA I + PNI K V I EYM GSL
Sbjct: 54 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTF 113
Query: 62 AEKFGGTLDA----GVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115
+K G G++R + + L G +H DL N+L+ S+ K+ D G +R
Sbjct: 114 LKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 173
Query: 116 VNDLKNNGNLKQSWQSIGG--TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATG--RPP 171
+ D + + ++ + GG W APE + A+D+WS G ++ E+ + RP
Sbjct: 174 LED-----DPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPY 228
Query: 172 W 172
W
Sbjct: 229 W 229
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 48 IFMEYMAGGSLLDVAEK--FGGTLDAGVIRLYTK---EILHGNGILHCDLKCNNVLLGSH 102
+ E M GGS+L K L+A V+ + LH GI H DLK N+L H
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILC-EH 146
Query: 103 GDVKLP------DLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEG-----LDF 151
+ P DLG ++N + + + G + +MAPEV+ D
Sbjct: 147 PNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAE-YMAPEVVEAFSEEASIYDK 205
Query: 152 ATDIWSLGCMVIEMATGRPPWGDKISN-----------AAATLLKIACSNEKPHFPTQFF 200
D+WSLG ++ + +G PP+ + + A +L + K FP + +
Sbjct: 206 RCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDW 265
Query: 201 KKVL----DFLAKCLERKPEKRWSAEELLNHTFISGNAKKNS 238
+ D ++K L R ++R SA ++L H ++ G A +N+
Sbjct: 266 AHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENT 307
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 51/101 (50%), Gaps = 17/101 (16%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR---------VNDLK-------NNGNL 125
+H +GI+H DLK N LL VK+ D G AR VNDL+ +N NL
Sbjct: 145 IHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNL 204
Query: 126 KQSWQSIGGTQLWMAPE-VLRNEGLDFATDIWSLGCMVIEM 165
K+ S T+ + APE +L E + DIWS GC+ E+
Sbjct: 205 KKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAEL 245
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDD-EMTGYVATRW--------YRAP 191
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 57/127 (44%), Gaps = 13/127 (10%)
Query: 52 YMAGGSLLDVAEKFGGTLDAG-VIRLYTKE-------ILHGNGILHCDLKCNNVLLGSHG 103
YM GSLLD GT +R + LH N +H D+K N+LL
Sbjct: 111 YMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAF 170
Query: 104 DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVI 163
K+ D G AR + I GT +MAPE LR E + +DI+S G +++
Sbjct: 171 TAKISDFGLARASEKFAQTVMXSR----IVGTTAYMAPEALRGE-ITPKSDIYSFGVVLL 225
Query: 164 EMATGRP 170
E+ TG P
Sbjct: 226 EIITGLP 232
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 68 TLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLK 120
TL IR Y EIL H GI+H D+K +NVL+ H ++L D G A +
Sbjct: 127 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLA----EFY 182
Query: 121 NNGNLKQSWQSIGGTQLWMAPEVLRNEGL-DFATDIWSLGCMVIEMATGRPPW--GDKIS 177
+ G Q + ++ + PE+L + + D++ D+WSLGCM+ M + P+ G
Sbjct: 183 HPG---QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 239
Query: 178 NAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
+ + K+ + + + ++ ++ L R KRW
Sbjct: 240 DQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRW 281
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 20/162 (12%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR + + + + T+ + AP
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-----TSFMMTPEVV--TRYYRAP 194
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATG--RPPWGDKIS--NAAATLLKIACSNEKPHFPT 197
EV+ G DIWS+GC++ EM G P D I N L C
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP-------- 246
Query: 198 QFFKKVLDFLAKCLERKPEKR-WSAEELLNHTFISGNAKKNS 238
+F KK+ + +E +P+ +S E+L +++ N+
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNA 288
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 75/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR D + G + W + AP
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD-EMTGYVATRW--------YRAP 198
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 316
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 57/127 (44%), Gaps = 13/127 (10%)
Query: 52 YMAGGSLLDVAEKFGGTLDAG-VIRLYTKE-------ILHGNGILHCDLKCNNVLLGSHG 103
YM GSLLD GT +R + LH N +H D+K N+LL
Sbjct: 111 YMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAF 170
Query: 104 DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVI 163
K+ D G AR + I GT +MAPE LR E + +DI+S G +++
Sbjct: 171 TAKISDFGLARASEKFAQTVMXXR----IVGTTAYMAPEALRGE-ITPKSDIYSFGVVLL 225
Query: 164 EMATGRP 170
E+ TG P
Sbjct: 226 EIITGLP 232
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDD-EMTGYVATRW--------YRAP 191
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 75/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR D + G + W + AP
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD-EMTGYVATRW--------YRAP 198
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 316
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 75/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR D + G + W + AP
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD-EMTGYVATRW--------YRAP 198
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 316
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 22/140 (15%)
Query: 46 VNIFMEYMAGGSLLD-VAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVL 98
+ + +EY AGG L D + EK T D G R + ++I+ H + I+H DLK N+L
Sbjct: 84 IVMVIEY-AGGELFDYIVEKKRMTEDEG--RRFFQQIICAIEYCHRHKIVHRDLKPENLL 140
Query: 99 LGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFA---TDI 155
L + +VK+ D G ++++ +GN ++ G+ + APEV+ G +A D+
Sbjct: 141 LDDNLNVKIADFG----LSNIMTDGNF---LKTSCGSPNYAAPEVI--NGKLYAGPEVDV 191
Query: 156 WSLGCMVIEMATGRPPWGDK 175
WS G ++ M GR P+ D+
Sbjct: 192 WSCGIVLYVMLVGRLPFDDE 211
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMAGFVATRW--------YRAP 191
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 252 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 88/218 (40%), Gaps = 26/218 (11%)
Query: 25 NEAEIRQSLNSPNIGRNG-----EKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTK 79
EAE+ L+ P + + + + + E+M G L D G A +
Sbjct: 51 EEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL 110
Query: 80 EILHGNG------ILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
++ G ++H DL N L+G + +K+ D G R V L + S
Sbjct: 111 DVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFV--------LDDQYTSST 162
Query: 134 GTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPWGDKISNAAATLLKIACS 189
GT+ W +PEV +D+WS G ++ E+ + G+ P+ ++ ++ +
Sbjct: 163 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR 222
Query: 190 NEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227
KP + ++++ C + +PE R + LL
Sbjct: 223 LYKPRLASTHVYQIMN---HCWKERPEDRPAFSRLLRQ 257
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMAGFVATRW--------YRAP 191
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 22/199 (11%)
Query: 34 NSPNIGRNGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRL-----YTK--EILHGNG 86
+S N R+ K + I ME+ G+L EK G V+ L TK + +H
Sbjct: 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK 142
Query: 87 ILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146
+++ DLK +N+ L VK+ D G V LKN+G +S GT +M+PE + +
Sbjct: 143 LINRDLKPSNIFLVDTKQVKIGDFGL---VTSLKNDGKRXRS----KGTLRYMSPEQISS 195
Query: 147 EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDF 206
+ D+++LG ++ E+ + + A K F KK
Sbjct: 196 QDYGKEVDLYALGLILAELL--------HVCDTAFETSKFFTDLRDGIISDIFDKKEKTL 247
Query: 207 LAKCLERKPEKRWSAEELL 225
L K L +KPE R + E+L
Sbjct: 248 LQKLLSKKPEDRPNTSEIL 266
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 107/267 (40%), Gaps = 39/267 (14%)
Query: 6 GALFVVKSAESEAG---VQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGS 57
G + VK E +AG + R + Q + NI + + E + GGS
Sbjct: 38 GKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGS 97
Query: 58 LLDVAEK---FGGTLDAGVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLP---- 108
+L +K F + V+R + LH GI H DLK N+L S V
Sbjct: 98 ILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICD 157
Query: 109 -DLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-----RNEGLDFATDIWSLGCMV 162
DLG ++N+ + G + +MAPEV+ + D D+WSLG ++
Sbjct: 158 FDLGSGMKLNNSCTPITTPELTTPCGSAE-YMAPEVVEVFTDQATFYDKRCDLWSLGVVL 216
Query: 163 IEMATGRPPW-----------GDKISNAAATLLKIACSNEKPHFPTQFFKKVL----DFL 207
M +G PP+ ++ L + K FP + + + D +
Sbjct: 217 YIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLI 276
Query: 208 AKCLERKPEKRWSAEELLNHTFISGNA 234
+K L R ++R SA ++L H ++ G A
Sbjct: 277 SKLLVRDAKQRLSAAQVLQHPWVQGQA 303
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 88/218 (40%), Gaps = 26/218 (11%)
Query: 25 NEAEIRQSLNSPNIGRNG-----EKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTK 79
EAE+ L+ P + + + + + E+M G L D G A +
Sbjct: 51 EEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL 110
Query: 80 EILHGNG------ILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
++ G ++H DL N L+G + +K+ D G R V L + S
Sbjct: 111 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV--------LDDQYTSST 162
Query: 134 GTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPWGDKISNAAATLLKIACS 189
GT+ W +PEV +D+WS G ++ E+ + G+ P+ ++ ++ +
Sbjct: 163 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR 222
Query: 190 NEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227
KP + ++++ C + +PE R + LL
Sbjct: 223 LYKPRLASTHVYQIMN---HCWKERPEDRPAFSRLLRQ 257
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 23/127 (18%)
Query: 40 RNGEKTVNIFMEYMAGGSL-------LDVAEKFGGTLDAGVIRLYTKEILHGNGILHCDL 92
R+G+ I MEY+ G SL L VAE L+ L LH G+++ DL
Sbjct: 153 RHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEI----LPALSYLHSIGLVYNDL 208
Query: 93 KCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFA 152
K N++L + +KL DLG R+N S+ + GT + APE++R G A
Sbjct: 209 KPENIML-TEEQLKLIDLGAVSRIN----------SFGYLYGTPGFQAPEIVRT-GPTVA 256
Query: 153 TDIWSLG 159
TDI+++G
Sbjct: 257 TDIYTVG 263
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 88/218 (40%), Gaps = 26/218 (11%)
Query: 25 NEAEIRQSLNSPNIGRNG-----EKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTK 79
EAE+ L+ P + + + + + E+M G L D G A +
Sbjct: 49 EEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL 108
Query: 80 EILHGNG------ILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
++ G ++H DL N L+G + +K+ D G R V L + S
Sbjct: 109 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV--------LDDQYTSST 160
Query: 134 GTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPWGDKISNAAATLLKIACS 189
GT+ W +PEV +D+WS G ++ E+ + G+ P+ ++ ++ +
Sbjct: 161 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR 220
Query: 190 NEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227
KP + ++++ C + +PE R + LL
Sbjct: 221 LYKPRLASTHVYQIMN---HCWKERPEDRPAFSRLLRQ 255
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 86/217 (39%), Gaps = 57/217 (26%)
Query: 68 TLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLK 120
TL IR Y EIL H GI+H D+K +NV++ H ++L D G A +
Sbjct: 127 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA----EFY 182
Query: 121 NNGNLKQSWQSIGGTQLWMAPEVLRNEGL-DFATDIWSLGCMVIEMATGRPPWGDKISNA 179
+ G Q + ++ + PE+L + + D++ D+WSLGCM+ M + P+ N
Sbjct: 183 HPG---QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN- 238
Query: 180 AATLLKIA--------------------------------------CSNEKPHFPTQFFK 201
L++IA +E H +
Sbjct: 239 YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVS---P 295
Query: 202 KVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNS 238
+ LDFL K L + R +A E + H + K+ S
Sbjct: 296 EALDFLDKLLRYDHQSRLTAREAMEHPYFYPVVKEQS 332
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 82/209 (39%), Gaps = 59/209 (28%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR-VNDLKNNGNLKQS------------ 128
LH G+LH D+K +N+LL + VK+ D G +R VN + N+ S
Sbjct: 125 LHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ 184
Query: 129 --WQSIGGTQLWMAPEVLR-NEGLDFATDIWSLGCMVIEMATGRP--------------- 170
T+ + APE+L + D+WSLGC++ E+ G+P
Sbjct: 185 PILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERII 244
Query: 171 ----------------PWGDKISNAAATLLKIACSNEKPHFP--TQFFKKV--------- 203
P+ + + ++I SN++ F K+
Sbjct: 245 GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEE 304
Query: 204 -LDFLAKCLERKPEKRWSAEELLNHTFIS 231
LD L K L+ P KR SA + L H F+S
Sbjct: 305 ALDLLDKLLQFNPNKRISANDALKHPFVS 333
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 88/218 (40%), Gaps = 26/218 (11%)
Query: 25 NEAEIRQSLNSPNIGRNG-----EKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTK 79
EAE+ L+ P + + + + + E+M G L D G A +
Sbjct: 71 EEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL 130
Query: 80 EILHGNG------ILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
++ G ++H DL N L+G + +K+ D G R V D + S
Sbjct: 131 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD--------DQYTSST 182
Query: 134 GTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPWGDKISNAAATLLKIACS 189
GT+ W +PEV +D+WS G ++ E+ + G+ P+ ++ ++ +
Sbjct: 183 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR 242
Query: 190 NEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227
KP + ++++ C + +PE R + LL
Sbjct: 243 LYKPRLASTHVYQIMN---HCWKERPEDRPAFSRLLRQ 277
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 20/161 (12%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR T+ + AP
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVVTRYYRAP 195
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATGRP--PWGDKIS--NAAATLLKIACSNEKPHFPT 197
EV+ G DIWS+GC++ EM G P D I N L C
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP-------- 247
Query: 198 QFFKKVLDFLAKCLERKPEKR-WSAEELLNHTFISGNAKKN 237
+F KK+ + +E +P+ +S E+L +++ N
Sbjct: 248 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHN 288
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 20/161 (12%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR T+ + AP
Sbjct: 144 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMVPFVVTRYYRAP 196
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATGRP--PWGDKIS--NAAATLLKIACSNEKPHFPT 197
EV+ G DIWS+GC++ EM G P D I N L C
Sbjct: 197 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP-------- 248
Query: 198 QFFKKVLDFLAKCLERKPEKR-WSAEELLNHTFISGNAKKN 237
+F KK+ + +E +P+ +S E+L +++ N
Sbjct: 249 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHN 289
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 26/177 (14%)
Query: 67 GTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDL 119
G L G R + +++ H G++H D+K N+L+ G KL D G ++D
Sbjct: 134 GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHD- 192
Query: 120 KNNGNLKQSWQSIGGTQLWMAPE-VLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISN 178
+ + GT+++ PE + R++ +WSLG ++ +M G P+
Sbjct: 193 -------EPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI 245
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAK 235
A L HFP + +CL KP R S EE+L ++ A+
Sbjct: 246 LEAEL----------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAE 292
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 16/159 (10%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR T+ + AP
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVVTRYYRAP 194
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATGRP--PWGDKISNAAATLLKIACSNEKPHFPTQF 199
EV+ G DIWS+GC++ EM G P D I + ++ + +F
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS------PEF 248
Query: 200 FKKVLDFLAKCLERKPEKR-WSAEELLNHTFISGNAKKN 237
KK+ + +E +P+ +S E+L +++ N
Sbjct: 249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHN 287
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-EMAGFVATRW--------YRAP 187
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 248 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 305
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 20/161 (12%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR T+ + AP
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVVTRYYRAP 194
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATG--RPPWGDKIS--NAAATLLKIACSNEKPHFPT 197
EV+ G DIWS+GC++ EM G P D I N L C
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP-------- 246
Query: 198 QFFKKVLDFLAKCLERKPEKR-WSAEELLNHTFISGNAKKN 237
+F KK+ + +E +P+ +S E+L +++ N
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHN 287
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 68 TLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLK 120
TL IR Y EIL H GI+H D+K +NV++ H ++L D G A +
Sbjct: 127 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA----EFY 182
Query: 121 NNGNLKQSWQSIGGTQLWMAPEVLRNEGL-DFATDIWSLGCMVIEMATGRPPW--GDKIS 177
+ G Q + ++ + PE+L + + D++ D+WSLGCM+ M + P+ G
Sbjct: 183 HPG---QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 239
Query: 178 NAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
+ + K+ + + + ++ ++ L R KRW
Sbjct: 240 DQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRW 281
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 68 TLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLK 120
TL IR Y EIL H GI+H D+K +NV++ H ++L D G A +
Sbjct: 127 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA----EFY 182
Query: 121 NNGNLKQSWQSIGGTQLWMAPEVLRNEGL-DFATDIWSLGCMVIEMATGRPPW--GDKIS 177
+ G Q + ++ + PE+L + + D++ D+WSLGCM+ M + P+ G
Sbjct: 183 HPG---QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 239
Query: 178 NAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
+ + K+ + + + ++ ++ L R KRW
Sbjct: 240 DQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRW 281
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 68 TLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLK 120
TL IR Y EIL H GI+H D+K +NV++ H ++L D G A +
Sbjct: 127 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA----EFY 182
Query: 121 NNGNLKQSWQSIGGTQLWMAPEVLRNEGL-DFATDIWSLGCMVIEMATGRPPW--GDKIS 177
+ G Q + ++ + PE+L + + D++ D+WSLGCM+ M + P+ G
Sbjct: 183 HPG---QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 239
Query: 178 NAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
+ + K+ + + + ++ ++ L R KRW
Sbjct: 240 DQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRW 281
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 57/127 (44%), Gaps = 13/127 (10%)
Query: 52 YMAGGSLLDVAEKFGGTLDAG-VIRLYTKE-------ILHGNGILHCDLKCNNVLLGSHG 103
YM GSLLD GT +R + LH N +H D+K N+LL
Sbjct: 105 YMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAF 164
Query: 104 DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVI 163
K+ D G AR + I GT +MAPE LR E + +DI+S G +++
Sbjct: 165 TAKISDFGLARASEKFAQXVMXXR----IVGTTAYMAPEALRGE-ITPKSDIYSFGVVLL 219
Query: 164 EMATGRP 170
E+ TG P
Sbjct: 220 EIITGLP 226
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 96/242 (39%), Gaps = 47/242 (19%)
Query: 16 SEAGVQALRNEAEIRQSLNSPNIGR------NGEKTVNIFMEYMAGGSLLDVAEKFG--- 66
SE+ Q + EAE+ L +I R G + +F EYM G L G
Sbjct: 83 SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVF-EYMRHGDLNRFLRSHGPDA 141
Query: 67 -----------GTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPD 109
G L G + ++ L G +H DL N L+G VK+ D
Sbjct: 142 KLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGD 201
Query: 110 LGCARRVNDLKNNGNLKQSWQSIGGTQL----WMAPEVLRNEGLDFATDIWSLGCMVIEM 165
G +R + + +GG + WM PE + +D+WS G ++ E+
Sbjct: 202 FGMSRDI--------YSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEI 253
Query: 166 AT-GRPPWGDKISNAAATLLKIACSNEKPHF--PTQFFKKVLDFLAKCLERKPEKRWSAE 222
T G+ PW ++SN A I C + P +V + C +R+P++R S +
Sbjct: 254 FTYGKQPW-YQLSNTEA----IDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIK 308
Query: 223 EL 224
++
Sbjct: 309 DV 310
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 12/134 (8%)
Query: 89 HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEG 148
H D+K N+L+ + L D G A D K L Q ++G T + APE
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEK----LTQLGNTVG-TLYYXAPERFSESH 211
Query: 149 LDFATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIA--CSNEKPHFPTQFFKKVLD 205
+ DI++L C++ E TG PP+ GD++S A + + S +P P F
Sbjct: 212 ATYRADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIPRPSTVRPGIPVAFDA---- 267
Query: 206 FLAKCLERKPEKRW 219
+A+ + PE R+
Sbjct: 268 VIARGXAKNPEDRY 281
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 68 TLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLK 120
TL IR Y EIL H GI+H D+K +NV++ H ++L D G A +
Sbjct: 127 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA----EFY 182
Query: 121 NNGNLKQSWQSIGGTQLWMAPEVLRNEGL-DFATDIWSLGCMVIEMATGRPPW--GDKIS 177
+ G Q + ++ + PE+L + + D++ D+WSLGCM+ M + P+ G
Sbjct: 183 HPG---QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 239
Query: 178 NAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
+ + K+ + + + ++ ++ L R KRW
Sbjct: 240 DQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRW 281
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 15/113 (13%)
Query: 68 TLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLK 120
TL IR Y EIL H GI+H D+K +NV++ H ++L D G A +
Sbjct: 127 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA----EFY 182
Query: 121 NNGNLKQSWQSIGGTQLWMAPEVLRNEGL-DFATDIWSLGCMVIEMATGRPPW 172
+ G Q + ++ + PE+L + + D++ D+WSLGCM+ M + P+
Sbjct: 183 HPG---QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 68 TLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLK 120
TL IR Y EIL H GI+H D+K +NV++ H ++L D G A +
Sbjct: 127 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA----EFY 182
Query: 121 NNGNLKQSWQSIGGTQLWMAPEVLRNEGL-DFATDIWSLGCMVIEMATGRPPW--GDKIS 177
+ G Q + ++ + PE+L + + D++ D+WSLGCM+ M + P+ G
Sbjct: 183 HPG---QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 239
Query: 178 NAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
+ + K+ + + + ++ ++ L R KRW
Sbjct: 240 DQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRW 281
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 16/159 (10%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR T+ + AP
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVVTRYYRAP 194
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATG--RPPWGDKISNAAATLLKIACSNEKPHFPTQF 199
EV+ G DIWS+GC++ EM G P D I + ++ + +F
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS------PEF 248
Query: 200 FKKVLDFLAKCLERKPEKR-WSAEELLNHTFISGNAKKN 237
KK+ + +E +P+ +S E+L +++ N
Sbjct: 249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHN 287
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 81/197 (41%), Gaps = 32/197 (16%)
Query: 1 MNKGTGALFVVKSAESEAGVQALRN---EAEIRQSLNSPNIGRNGEKTVNI--------- 48
+++ TG +K E + E +I + LN PN+ E +
Sbjct: 34 IHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93
Query: 49 --FMEYMAGGSLLDVAEKFGGT--LDAGVIRLYTKEI------LHGNGILHCDLKCNNVL 98
MEY GG L +F L G IR +I LH N I+H DLK N++
Sbjct: 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIV 153
Query: 99 L--GSHGDV-KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDI 155
L G + K+ DLG A+ ++ G L + GT ++APE+L + D
Sbjct: 154 LQPGPQRLIHKIIDLGYAKELD----QGELCTEF---VGTLQYLAPELLEQKKYTVTVDY 206
Query: 156 WSLGCMVIEMATGRPPW 172
WS G + E TG P+
Sbjct: 207 WSFGTLAFECITGFRPF 223
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 68 TLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLK 120
TL IR Y EIL H GI+H D+K +NV++ H ++L D G A +
Sbjct: 127 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA----EFY 182
Query: 121 NNGNLKQSWQSIGGTQLWMAPEVLRNEGL-DFATDIWSLGCMVIEMATGRPPW--GDKIS 177
+ G Q + ++ + PE+L + + D++ D+WSLGCM+ M + P+ G
Sbjct: 183 HPG---QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 239
Query: 178 NAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
+ + K+ + + + ++ ++ L R KRW
Sbjct: 240 DQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRW 281
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 77/188 (40%), Gaps = 45/188 (23%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR N + + T+ + AP
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC-----TNFMMTPYVV--TRYYRAP 194
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATG---------RPPWGDKI------SNAAATLLKI 186
EV+ G DIWS+GC++ E+ G W I S L+
Sbjct: 195 EVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQP 254
Query: 187 ACSN---EKPHFPTQFFKKVL--------------------DFLAKCLERKPEKRWSAEE 223
N +P +P F+++ D L+K L P+KR S +E
Sbjct: 255 TVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDE 314
Query: 224 LLNHTFIS 231
L H +I+
Sbjct: 315 ALRHPYIT 322
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 87/218 (39%), Gaps = 26/218 (11%)
Query: 25 NEAEIRQSLNSPNIGRNG-----EKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTK 79
EAE+ L+ P + + + + + E+M G L D G A +
Sbjct: 54 EEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL 113
Query: 80 EILHGNG------ILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
++ G ++H DL N L+G + +K+ D G R V L + S
Sbjct: 114 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV--------LDDQYTSST 165
Query: 134 GTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPWGDKISNAAATLLKIACS 189
GT+ W +PEV +D+WS G ++ E+ + G+ P+ ++ ++ +
Sbjct: 166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR 225
Query: 190 NEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227
KP + ++++ C +PE R + LL
Sbjct: 226 LYKPRLASTHVYQIMN---HCWRERPEDRPAFSRLLRQ 260
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 68 TLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLK 120
TL IR Y EIL H GI+H D+K +NV++ H ++L D G A +
Sbjct: 132 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA----EFY 187
Query: 121 NNGNLKQSWQSIGGTQLWMAPEVLRNEGL-DFATDIWSLGCMVIEMATGRPPW--GDKIS 177
+ G Q + ++ + PE+L + + D++ D+WSLGCM+ M + P+ G
Sbjct: 188 HPG---QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 244
Query: 178 NAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
+ + K+ + + + ++ ++ L R KRW
Sbjct: 245 DQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRW 286
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 81/197 (41%), Gaps = 32/197 (16%)
Query: 1 MNKGTGALFVVKSAESEAGVQALRN---EAEIRQSLNSPNIGRNGEKTVNI--------- 48
+++ TG +K E + E +I + LN PN+ E +
Sbjct: 35 IHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 94
Query: 49 --FMEYMAGGSLLDVAEKFGGT--LDAGVIRLYTKEI------LHGNGILHCDLKCNNVL 98
MEY GG L +F L G IR +I LH N I+H DLK N++
Sbjct: 95 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIV 154
Query: 99 L--GSHGDV-KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDI 155
L G + K+ DLG A+ ++ G L + GT ++APE+L + D
Sbjct: 155 LQPGPQRLIHKIIDLGYAKELD----QGELCTEF---VGTLQYLAPELLEQKKYTVTVDY 207
Query: 156 WSLGCMVIEMATGRPPW 172
WS G + E TG P+
Sbjct: 208 WSFGTLAFECITGFRPF 224
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 96/242 (39%), Gaps = 47/242 (19%)
Query: 16 SEAGVQALRNEAEIRQSLNSPNIGR------NGEKTVNIFMEYMAGGSLLDVAEKFG--- 66
SE+ Q + EAE+ L +I R G + +F EYM G L G
Sbjct: 60 SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVF-EYMRHGDLNRFLRSHGPDA 118
Query: 67 -----------GTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPD 109
G L G + ++ L G +H DL N L+G VK+ D
Sbjct: 119 KLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGD 178
Query: 110 LGCARRVNDLKNNGNLKQSWQSIGGTQL----WMAPEVLRNEGLDFATDIWSLGCMVIEM 165
G +R + + +GG + WM PE + +D+WS G ++ E+
Sbjct: 179 FGMSRDI--------YSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEI 230
Query: 166 AT-GRPPWGDKISNAAATLLKIACSNEKPHF--PTQFFKKVLDFLAKCLERKPEKRWSAE 222
T G+ PW ++SN A I C + P +V + C +R+P++R S +
Sbjct: 231 FTYGKQPW-YQLSNTEA----IDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIK 285
Query: 223 EL 224
++
Sbjct: 286 DV 287
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 82 LHGNGILHCDLKCNNVLLGSHG-------------DVKLPDLGCARRVNDLKNNGNLKQS 128
LH I+H DLK N+L+ + + + D G ++++ + +
Sbjct: 149 LHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD--SGQXXFRXN 206
Query: 129 WQSIGGTQLWMAPEVLRNEG---LDFATDIWSLGCMVIE-MATGRPPWGDKISNAAATLL 184
+ GT W APE+L L + DI+S+GC+ ++ G+ P+GDK S + +
Sbjct: 207 LNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIR 266
Query: 185 KIACSNE-KPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKK 236
I +E K + D +++ ++ P KR +A ++L H +KK
Sbjct: 267 GIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKK 319
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 68 TLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLK 120
TL IR Y EIL H GI+H D+K +NV++ H ++L D G A +
Sbjct: 126 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA----EFY 181
Query: 121 NNGNLKQSWQSIGGTQLWMAPEVLRNEGL-DFATDIWSLGCMVIEMATGRPPW--GDKIS 177
+ G Q + ++ + PE+L + + D++ D+WSLGCM+ M + P+ G
Sbjct: 182 HPG---QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 238
Query: 178 NAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
+ + K+ + + + ++ ++ L R KRW
Sbjct: 239 DQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRW 280
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 96/242 (39%), Gaps = 47/242 (19%)
Query: 16 SEAGVQALRNEAEIRQSLNSPNIGR------NGEKTVNIFMEYMAGGSLLDVAEKFG--- 66
SE+ Q + EAE+ L +I R G + +F EYM G L G
Sbjct: 54 SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVF-EYMRHGDLNRFLRSHGPDA 112
Query: 67 -----------GTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPD 109
G L G + ++ L G +H DL N L+G VK+ D
Sbjct: 113 KLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGD 172
Query: 110 LGCARRVNDLKNNGNLKQSWQSIGGTQL----WMAPEVLRNEGLDFATDIWSLGCMVIEM 165
G +R + + +GG + WM PE + +D+WS G ++ E+
Sbjct: 173 FGMSRDI--------YSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEI 224
Query: 166 AT-GRPPWGDKISNAAATLLKIACSNEKPHF--PTQFFKKVLDFLAKCLERKPEKRWSAE 222
T G+ PW ++SN A I C + P +V + C +R+P++R S +
Sbjct: 225 FTYGKQPW-YQLSNTEA----IDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIK 279
Query: 223 EL 224
++
Sbjct: 280 DV 281
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 82 LHGNGILHCDLKCNNVLLGSHG-------------DVKLPDLGCARRVNDLKNNGNLKQS 128
LH I+H DLK N+L+ + + + D G ++++ + +
Sbjct: 149 LHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD--SGQXXFRXN 206
Query: 129 WQSIGGTQLWMAPEVLRNEG---LDFATDIWSLGCMVIE-MATGRPPWGDKISNAAATLL 184
+ GT W APE+L L + DI+S+GC+ ++ G+ P+GDK S + +
Sbjct: 207 LNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIR 266
Query: 185 KIACSNE-KPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKK 236
I +E K + D +++ ++ P KR +A ++L H +KK
Sbjct: 267 GIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKK 319
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 68 TLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLK 120
TL IR Y EIL H GI+H D+K +NV++ H ++L D G A +
Sbjct: 125 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA----EFY 180
Query: 121 NNGNLKQSWQSIGGTQLWMAPEVLRNEGL-DFATDIWSLGCMVIEMATGRPPW--GDKIS 177
+ G Q + ++ + PE+L + + D++ D+WSLGCM+ M + P+ G
Sbjct: 181 HPG---QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 237
Query: 178 NAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
+ + K+ + + + ++ ++ L R KRW
Sbjct: 238 DQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRW 279
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 68 TLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLK 120
TL IR Y EIL H GI+H D+K +NV++ H ++L D G A +
Sbjct: 127 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA----EFY 182
Query: 121 NNGNLKQSWQSIGGTQLWMAPEVLRNEGL-DFATDIWSLGCMVIEMATGRPPW--GDKIS 177
+ G Q + ++ + PE+L + + D++ D+WSLGCM+ M + P+ G
Sbjct: 183 HPG---QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 239
Query: 178 NAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
+ + K+ + + + ++ ++ L R KRW
Sbjct: 240 DQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRW 281
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 83/192 (43%), Gaps = 28/192 (14%)
Query: 53 MAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGC 112
+ +L +A++ AG++ L ++ +H DL N L+G + VK+ D G
Sbjct: 125 LTQSQMLHIAQQIA----AGMVYLASQHFVHR------DLATRNCLVGENLLVKIGDFGM 174
Query: 113 ARRVNDLKNNGNLKQSWQSIGGTQL----WMAPEVLRNEGLDFATDIWSLGCMVIEMAT- 167
+R V + +GG + WM PE + +D+WSLG ++ E+ T
Sbjct: 175 SRDV--------YSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTY 226
Query: 168 GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227
G+ PW +N + ++P Q +V + + C +R+P R + + + H
Sbjct: 227 GKQPWYQLSNNEVIECITQGRVLQRPRTCPQ---EVYELMLGCWQREPHMRKNIKGI--H 281
Query: 228 TFISGNAKKNST 239
T + AK +
Sbjct: 282 TLLQNLAKASPV 293
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 68 TLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLK 120
TL IR Y EIL H GI+H D+K +NV++ H ++L D G A +
Sbjct: 127 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA----EFY 182
Query: 121 NNGNLKQSWQSIGGTQLWMAPEVLRNEGL-DFATDIWSLGCMVIEMATGRPPW--GDKIS 177
+ G Q + ++ + PE+L + + D++ D+WSLGCM+ M + P+ G
Sbjct: 183 HPG---QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 239
Query: 178 NAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
+ + K+ + + + ++ ++ L R KRW
Sbjct: 240 DQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRW 281
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 68 TLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLK 120
TL IR Y EIL H GI+H D+K +NV++ H ++L D G A +
Sbjct: 126 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA----EFY 181
Query: 121 NNGNLKQSWQSIGGTQLWMAPEVLRNEGL-DFATDIWSLGCMVIEMATGRPPW--GDKIS 177
+ G Q + ++ + PE+L + + D++ D+WSLGCM+ M + P+ G
Sbjct: 182 HPG---QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 238
Query: 178 NAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219
+ + K+ + + + ++ ++ L R KRW
Sbjct: 239 DQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRW 280
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 71/188 (37%), Gaps = 45/188 (23%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR T+ + AP
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR-------TAGTSFMMTPYVVTRYYRAP 194
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATGRP--PWGDKIS--NAAATLLKIACS-------- 189
EV+ G DIWS+GC++ EM + P D I N L C
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 190 ------NEKPH---------FPTQFF-----------KKVLDFLAKCLERKPEKRWSAEE 223
+P FP F + D L+K L P KR S ++
Sbjct: 255 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 314
Query: 224 LLNHTFIS 231
L H +I+
Sbjct: 315 ALQHPYIN 322
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 20/107 (18%)
Query: 79 KEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN----------------- 121
++ +H +GI+H DLK N LL VK+ D G AR +N K+
Sbjct: 144 EKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPG 203
Query: 122 --NGNLKQSWQSIGGTQLWMAPE-VLRNEGLDFATDIWSLGCMVIEM 165
N NLK+ S T+ + APE +L E + DIWS GC+ E+
Sbjct: 204 PHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAEL 250
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 71/188 (37%), Gaps = 45/188 (23%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR T+ + AP
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR-------TAGTSFMMTPYVVTRYYRAP 194
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATGRP--PWGDKIS--NAAATLLKIACS-------- 189
EV+ G DIWS+GC++ EM + P D I N L C
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 190 ------NEKPH---------FPTQFF-----------KKVLDFLAKCLERKPEKRWSAEE 223
+P FP F + D L+K L P KR S ++
Sbjct: 255 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 314
Query: 224 LLNHTFIS 231
L H +I+
Sbjct: 315 ALQHPYIN 322
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D G AR +D + G + W + AP
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDD-EMTGYVATRW--------YRAP 191
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 78/177 (44%), Gaps = 24/177 (13%)
Query: 82 LHGNGILHCDLKCNNVLLGSHG-------------DVKLPDLGCARRVNDLKNNGNLKQS 128
LH I+H DLK N+L+ + + + D G ++++ + + +
Sbjct: 131 LHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD--SGQSSFRTN 188
Query: 129 WQSIGGTQLWMAPEVLRNEG-------LDFATDIWSLGCMVIE-MATGRPPWGDKISNAA 180
+ GT W APE+L L + DI+S+GC+ ++ G+ P+GDK S +
Sbjct: 189 LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES 248
Query: 181 ATLLKIACSNE-KPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKK 236
+ I +E K + D +++ ++ P KR +A ++L H +KK
Sbjct: 249 NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKK 305
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 71/188 (37%), Gaps = 45/188 (23%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR T+ + AP
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR-------TAGTSFMMTPYVVTRYYRAP 194
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATGRP--PWGDKIS--NAAATLLKIACS-------- 189
EV+ G DIWS+GC++ EM + P D I N L C
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 190 ------NEKPH---------FPTQFF-----------KKVLDFLAKCLERKPEKRWSAEE 223
+P FP F + D L+K L P KR S ++
Sbjct: 255 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 314
Query: 224 LLNHTFIS 231
L H +I+
Sbjct: 315 ALQHPYIN 322
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 71/188 (37%), Gaps = 45/188 (23%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR T+ + AP
Sbjct: 135 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR-------TAGTSFMMTPYVVTRYYRAP 187
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATGRP--PWGDKIS--NAAATLLKIACS-------- 189
EV+ G DIWS+GC++ EM + P D I N L C
Sbjct: 188 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 247
Query: 190 ------NEKPH---------FPTQFF-----------KKVLDFLAKCLERKPEKRWSAEE 223
+P FP F + D L+K L P KR S ++
Sbjct: 248 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 307
Query: 224 LLNHTFIS 231
L H +I+
Sbjct: 308 ALQHPYIN 315
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 87/218 (39%), Gaps = 26/218 (11%)
Query: 25 NEAEIRQSLNSPNIGRNG-----EKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTK 79
EAE+ L+ P + + + + + E+M G L D G A +
Sbjct: 52 EEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCL 111
Query: 80 EILHGNG------ILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133
++ G ++H DL N L+G + +K+ D G R V L + S
Sbjct: 112 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV--------LDDQYTSST 163
Query: 134 GTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPWGDKISNAAATLLKIACS 189
GT+ W +PEV +D+WS G ++ E+ + G+ P+ ++ ++ +
Sbjct: 164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR 223
Query: 190 NEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227
KP + ++++ C +PE R + LL
Sbjct: 224 LYKPRLASTHVYQIMN---HCWRERPEDRPAFSRLLRQ 258
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 71/188 (37%), Gaps = 45/188 (23%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR T+ + AP
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR-------TAGTSFMMTPYVVTRYYRAP 194
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATGRP--PWGDKIS--NAAATLLKIACS-------- 189
EV+ G DIWS+GC++ EM + P D I N L C
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 190 ------NEKPH---------FPTQFF-----------KKVLDFLAKCLERKPEKRWSAEE 223
+P FP F + D L+K L P KR S ++
Sbjct: 255 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 314
Query: 224 LLNHTFIS 231
L H +I+
Sbjct: 315 ALQHPYIN 322
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 73/185 (39%), Gaps = 18/185 (9%)
Query: 43 EKTVNIFMEYMAGGSLLDVAEKFGGT-------LDAGVIRLYTKEILHGNGILHCDLKCN 95
++ + I EYM GSL+D + G LD + +H DL+
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 138
Query: 96 NVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDI 155
N+L+ K+ D G AR + D + + W APE + +D+
Sbjct: 139 NILVSDTLSCKIADFGLARLIEDAEXTAR-----EGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 156 WSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKP-HFPTQFFKKVLDFLAKCLER 213
WS G ++ E+ T GR P+ + L+ +P + P + ++ + C +
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQ----LMRLCWKE 249
Query: 214 KPEKR 218
+PE R
Sbjct: 250 RPEDR 254
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 70/187 (37%), Gaps = 45/187 (24%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR T+ + AP
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR-------TAGTSFMMTPYVVTRYYRAP 194
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATG-----------------------RPPWGDKISN 178
EV+ G DIWS+G ++ EM G P + K+
Sbjct: 195 EVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 179 AAATLL----KIACSNEKPHFPTQFF-----------KKVLDFLAKCLERKPEKRWSAEE 223
T + K A + + FP F + D L+K L KR S +E
Sbjct: 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314
Query: 224 LLNHTFI 230
L H +I
Sbjct: 315 ALQHPYI 321
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 81 ILHGNGILHCDLKCNNVLLGSHGDV-KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL-- 137
L +H DL N+LL +HG + K+ D G AR D+KN+ N + G +L
Sbjct: 183 FLASKNCIHRDLAARNILL-THGRITKICDFGLAR---DIKNDSN----YVVKGNARLPV 234
Query: 138 -WMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPW-GDKISNAAATLLKIACSNEKP- 193
WMAPE + N F +D+WS G + E+ + G P+ G + + ++K P
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 294
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226
H P + + D + C + P KR + ++++
Sbjct: 295 HAPAEMY----DIMKTCWDADPLKRPTFKQIVQ 323
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 91/232 (39%), Gaps = 25/232 (10%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNI----GRNGEKTVNIFMEYMAGGSLLDVA 62
A+ K+ S++ + EA + + P+I G E V I ME G L
Sbjct: 42 AIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL 101
Query: 63 EKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRV 116
+ +LD + LY ++ L +H D+ NVL+ S+ VKL D G +R +
Sbjct: 102 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 161
Query: 117 NDLKNNGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLG-CMVIEMATGRPPW 172
D ++ +L WMAPE + A+D+W G CM + G P+
Sbjct: 162 ED--------STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
Query: 173 GDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
+N ++ + E+ P + + KC P +R EL
Sbjct: 214 QGVKNNDVIGRIE---NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 81 ILHGNGILHCDLKCNNVLLGSHGDV-KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL-- 137
L +H DL N+LL +HG + K+ D G AR D+KN+ N + G +L
Sbjct: 178 FLASKNCIHRDLAARNILL-THGRITKICDFGLAR---DIKNDSN----YVVKGNARLPV 229
Query: 138 -WMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPW-GDKISNAAATLLKIACSNEKP- 193
WMAPE + N F +D+WS G + E+ + G P+ G + + ++K P
Sbjct: 230 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 289
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226
H P + + D + C + P KR + ++++
Sbjct: 290 HAPAEMY----DIMKTCWDADPLKRPTFKQIVQ 318
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 91/232 (39%), Gaps = 25/232 (10%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNI----GRNGEKTVNIFMEYMAGGSLLDVA 62
A+ K+ S++ + EA + + P+I G E V I ME G L
Sbjct: 42 AIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL 101
Query: 63 EKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRV 116
+ +LD + LY ++ L +H D+ NVL+ S+ VKL D G +R +
Sbjct: 102 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 161
Query: 117 NDLKNNGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLG-CMVIEMATGRPPW 172
D ++ +L WMAPE + A+D+W G CM + G P+
Sbjct: 162 ED--------STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
Query: 173 GDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
+N ++ + E+ P + + KC P +R EL
Sbjct: 214 QGVKNNDVIGRIE---NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 91/232 (39%), Gaps = 25/232 (10%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNI----GRNGEKTVNIFMEYMAGGSLLDVA 62
A+ K+ S++ + EA + + P+I G E V I ME G L
Sbjct: 39 AIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL 98
Query: 63 EKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRV 116
+ +LD + LY ++ L +H D+ NVL+ S+ VKL D G +R +
Sbjct: 99 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 158
Query: 117 NDLKNNGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLG-CMVIEMATGRPPW 172
D ++ +L WMAPE + A+D+W G CM + G P+
Sbjct: 159 ED--------STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 210
Query: 173 GDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
+N ++ + E+ P + + KC P +R EL
Sbjct: 211 QGVKNNDVIGRIE---NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 259
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 91/232 (39%), Gaps = 25/232 (10%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNI----GRNGEKTVNIFMEYMAGGSLLDVA 62
A+ K+ S++ + EA + + P+I G E V I ME G L
Sbjct: 70 AIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL 129
Query: 63 EKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRV 116
+ +LD + LY ++ L +H D+ NVL+ S+ VKL D G +R +
Sbjct: 130 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 189
Query: 117 NDLKNNGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLG-CMVIEMATGRPPW 172
D ++ +L WMAPE + A+D+W G CM + G P+
Sbjct: 190 ED--------STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 241
Query: 173 GDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
+N ++ + E+ P + + KC P +R EL
Sbjct: 242 QGVKNNDVIGRIE---NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 290
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 91/232 (39%), Gaps = 25/232 (10%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNI----GRNGEKTVNIFMEYMAGGSLLDVA 62
A+ K+ S++ + EA + + P+I G E V I ME G L
Sbjct: 47 AIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL 106
Query: 63 EKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRV 116
+ +LD + LY ++ L +H D+ NVL+ S+ VKL D G +R +
Sbjct: 107 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166
Query: 117 NDLKNNGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLG-CMVIEMATGRPPW 172
D ++ +L WMAPE + A+D+W G CM + G P+
Sbjct: 167 ED--------STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 218
Query: 173 GDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
+N ++ + E+ P + + KC P +R EL
Sbjct: 219 QGVKNNDVIGRIE---NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 267
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 91/232 (39%), Gaps = 25/232 (10%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNI----GRNGEKTVNIFMEYMAGGSLLDVA 62
A+ K+ S++ + EA + + P+I G E V I ME G L
Sbjct: 45 AIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL 104
Query: 63 EKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRV 116
+ +LD + LY ++ L +H D+ NVL+ S+ VKL D G +R +
Sbjct: 105 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 164
Query: 117 NDLKNNGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLG-CMVIEMATGRPPW 172
D ++ +L WMAPE + A+D+W G CM + G P+
Sbjct: 165 ED--------STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 216
Query: 173 GDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
+N ++ + E+ P + + KC P +R EL
Sbjct: 217 QGVKNNDVIGRIE---NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 265
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 43 EKTVNIFMEYMAGGSLLDVAEKFGGT-------LDAGVIRLYTKEILHGNGILHCDLKCN 95
++ + I EYM GSL+D + G LD + +H DL+
Sbjct: 87 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 146
Query: 96 NVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDI 155
N+L+ K+ D G AR + D N + + W APE + +D+
Sbjct: 147 NILVSDTLSCKIADFGLARLIED-----NEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 201
Query: 156 WSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKP-HFPTQFFKKVLDFLAKCLER 213
WS G ++ E+ T GR P+ + L+ +P + P + ++ + C +
Sbjct: 202 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQ----LMRLCWKE 257
Query: 214 KPEKR 218
+PE R
Sbjct: 258 RPEDR 262
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 43 EKTVNIFMEYMAGGSLLDVAEKFGGT-------LDAGVIRLYTKEILHGNGILHCDLKCN 95
++ + I EYM GSL+D + G LD + +H DL+
Sbjct: 85 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 144
Query: 96 NVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDI 155
N+L+ K+ D G AR + D N + + W APE + +D+
Sbjct: 145 NILVSDTLSCKIADFGLARLIED-----NEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 199
Query: 156 WSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKP-HFPTQFFKKVLDFLAKCLER 213
WS G ++ E+ T GR P+ + L+ +P + P + ++ + C +
Sbjct: 200 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQ----LMRLCWKE 255
Query: 214 KPEKR 218
+PE R
Sbjct: 256 RPEDR 260
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 43 EKTVNIFMEYMAGGSLLDVAEKFGGT-------LDAGVIRLYTKEILHGNGILHCDLKCN 95
++ + I EYM GSL+D + G LD + +H DL+
Sbjct: 80 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 139
Query: 96 NVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDI 155
N+L+ K+ D G AR + D N + + W APE + +D+
Sbjct: 140 NILVSDTLSCKIADFGLARLIED-----NEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 194
Query: 156 WSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKP-HFPTQFFKKVLDFLAKCLER 213
WS G ++ E+ T GR P+ + L+ +P + P + ++ + C +
Sbjct: 195 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQ----LMRLCWKE 250
Query: 214 KPEKR 218
+PE R
Sbjct: 251 RPEDR 255
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 19/179 (10%)
Query: 53 MAGGSLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNVLLGSHGDVK 106
+ G SL E +G +L + Y ++ L H G++H D+K N+ LG G K
Sbjct: 138 LCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCK 197
Query: 107 LPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMA 166
L D G + G +++ G +MAPE+L+ A D++SLG ++E+A
Sbjct: 198 LGDFGLLVELGT-AGAGEVQE------GDPRYMAPELLQGS-YGTAADVFSLGLTILEVA 249
Query: 167 TGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
++ + ++ P F ++ L LE P+ R +AE LL
Sbjct: 250 CNM-----ELPHGGEGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALL 303
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 43 EKTVNIFMEYMAGGSLLDVAEKFGGT-------LDAGVIRLYTKEILHGNGILHCDLKCN 95
++ + I EYM GSL+D + G LD + +H DL+
Sbjct: 74 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 133
Query: 96 NVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDI 155
N+L+ K+ D G AR + D N + + W APE + +D+
Sbjct: 134 NILVSDTLSCKIADFGLARLIED-----NEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 188
Query: 156 WSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKP-HFPTQFFKKVLDFLAKCLER 213
WS G ++ E+ T GR P+ + L+ +P + P + ++ + C +
Sbjct: 189 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQ----LMRLCWKE 244
Query: 214 KPEKR 218
+PE R
Sbjct: 245 RPEDR 249
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 19/182 (10%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDV 61
A+ +K +E + EA I + PN+ K V I +E+M G+L
Sbjct: 75 AIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAF 134
Query: 62 AEKFGGTLDA----GVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115
K G G++R L G +H DL N+L+ S+ K+ D G +R
Sbjct: 135 LRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRV 194
Query: 116 VNDLKNNGNLKQSWQSIGG--TQLWMAPEVLRNEGLDFATDIWSLGCMVIE-MATGRPPW 172
+ D + + + + GG W APE ++ A+D+WS G ++ E M+ G P+
Sbjct: 195 IED-----DPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY 249
Query: 173 GD 174
D
Sbjct: 250 WD 251
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 70/187 (37%), Gaps = 45/187 (24%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR T+ + AP
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR-------TAGTSFMMTPYVVTRYYRAP 194
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATG-----------------------RPPWGDKISN 178
EV+ G DIWS+G ++ EM G P + K+
Sbjct: 195 EVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 179 AAATLL----KIACSNEKPHFPTQFF-----------KKVLDFLAKCLERKPEKRWSAEE 223
T + K A + + FP F + D L+K L KR S +E
Sbjct: 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314
Query: 224 LLNHTFI 230
L H +I
Sbjct: 315 ALQHPYI 321
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 81 ILHGNGILHCDLKCNNVLLGSHGDV-KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL-- 137
L +H DL N+LL +HG + K+ D G AR D+KN+ N + G +L
Sbjct: 160 FLASKNCIHRDLAARNILL-THGRITKICDFGLAR---DIKNDSN----YVVKGNARLPV 211
Query: 138 -WMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPW-GDKISNAAATLLKIACSNEKP- 193
WMAPE + N F +D+WS G + E+ + G P+ G + + ++K P
Sbjct: 212 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 271
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226
H P + + D + C + P KR + ++++
Sbjct: 272 HAPAEMY----DIMKTCWDADPLKRPTFKQIVQ 300
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 91/232 (39%), Gaps = 25/232 (10%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNI----GRNGEKTVNIFMEYMAGGSLLDVA 62
A+ K+ S++ + EA + + P+I G E V I ME G L
Sbjct: 44 AIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL 103
Query: 63 EKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRV 116
+ +LD + LY ++ L +H D+ NVL+ S+ VKL D G +R +
Sbjct: 104 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 163
Query: 117 NDLKNNGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLG-CMVIEMATGRPPW 172
D ++ +L WMAPE + A+D+W G CM + G P+
Sbjct: 164 ED--------STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 215
Query: 173 GDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
+N ++ + E+ P + + KC P +R EL
Sbjct: 216 QGVKNNDVIGRIE---NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 264
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 43 EKTVNIFMEYMAGGSLLDVAEKFGGT-------LDAGVIRLYTKEILHGNGILHCDLKCN 95
++ + I EYM GSL+D + G LD + +H DL+
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 138
Query: 96 NVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDI 155
N+L+ K+ D G AR + D N + + W APE + +D+
Sbjct: 139 NILVSDTLSCKIADFGLARLIED-----NEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 156 WSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKP-HFPTQFFKKVLDFLAKCLER 213
WS G ++ E+ T GR P+ + L+ +P + P + ++ + C +
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQ----LMRLCWKE 249
Query: 214 KPEKR 218
+PE R
Sbjct: 250 RPEDR 254
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 43 EKTVNIFMEYMAGGSLLDVAEKFGGT-------LDAGVIRLYTKEILHGNGILHCDLKCN 95
++ + I EYM GSL+D + G LD + +H DL+
Sbjct: 81 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 140
Query: 96 NVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDI 155
N+L+ K+ D G AR + D N + + W APE + +D+
Sbjct: 141 NILVSDTLSCKIADFGLARLIED-----NEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 195
Query: 156 WSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKP-HFPTQFFKKVLDFLAKCLER 213
WS G ++ E+ T GR P+ + L+ +P + P + ++ + C +
Sbjct: 196 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQ----LMRLCWKE 251
Query: 214 KPEKR 218
+PE R
Sbjct: 252 RPEDR 256
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 81 ILHGNGILHCDLKCNNVLLGSHGDV-KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL-- 137
L +H DL N+LL +HG + K+ D G AR D+KN+ N + G +L
Sbjct: 176 FLASKNCIHRDLAARNILL-THGRITKICDFGLAR---DIKNDSN----YVVKGNARLPV 227
Query: 138 -WMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPW-GDKISNAAATLLKIACSNEKP- 193
WMAPE + N F +D+WS G + E+ + G P+ G + + ++K P
Sbjct: 228 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 287
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226
H P + + D + C + P KR + ++++
Sbjct: 288 HAPAEMY----DIMKTCWDADPLKRPTFKQIVQ 316
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 43 EKTVNIFMEYMAGGSLLDVAEKFGGT-------LDAGVIRLYTKEILHGNGILHCDLKCN 95
++ + I EYM GSL+D + G LD + +H DL+
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 138
Query: 96 NVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDI 155
N+L+ K+ D G AR + D N + + W APE + +D+
Sbjct: 139 NILVSDTLSCKIADFGLARLIED-----NEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 156 WSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKP-HFPTQFFKKVLDFLAKCLER 213
WS G ++ E+ T GR P+ + L+ +P + P + ++ + C +
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQ----LMRLCWKE 249
Query: 214 KPEKR 218
+PE R
Sbjct: 250 RPEDR 254
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 75/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ D AR +D + G + W + AP
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDD-EMTGYVATRW--------YRAP 191
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 43 EKTVNIFMEYMAGGSLLDVAEKFGGT-------LDAGVIRLYTKEILHGNGILHCDLKCN 95
++ + I EYM GSL+D + G LD + +H DL+
Sbjct: 85 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 144
Query: 96 NVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDI 155
N+L+ K+ D G AR + D N + + W APE + +D+
Sbjct: 145 NILVSDTLSCKIADFGLARLIED-----NEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 199
Query: 156 WSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKP-HFPTQFFKKVLDFLAKCLER 213
WS G ++ E+ T GR P+ + L+ +P + P + ++ + C +
Sbjct: 200 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQ----LMRLCWKE 255
Query: 214 KPEKR 218
+PE R
Sbjct: 256 RPEDR 260
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 26/173 (15%)
Query: 14 AESEAGVQ--ALRNEAEIRQSLNSPNI----GRNGEKT-VNIFMEYMAGGSLLDVAEKFG 66
+E++ G+ ALR E ++ Q L+ PNI G K+ +++ ++M L + +
Sbjct: 49 SEAKDGINRTALR-EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNS 106
Query: 67 GTLDAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
L I+ Y E LH + ILH DLK NN+LL +G +KL D G A K
Sbjct: 107 LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLA------K 160
Query: 121 NNGNLKQSWQSIGGTQLWMAPEVL---RNEGLDFATDIWSLGCMVIEMATGRP 170
+ G+ +++ T+ + APE+L R G+ D+W++GC++ E+ P
Sbjct: 161 SFGSPNRAYXHQVVTRWYRAPELLFGARMYGV--GVDMWAVGCILAELLLRVP 211
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 43 EKTVNIFMEYMAGGSLLDVAEKFGGT-------LDAGVIRLYTKEILHGNGILHCDLKCN 95
++ + I EYM GSL+D + G LD + +H DL+
Sbjct: 89 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 148
Query: 96 NVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDI 155
N+L+ K+ D G AR + D N + + W APE + +D+
Sbjct: 149 NILVSDTLSCKIADFGLARLIED-----NEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 203
Query: 156 WSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKP-HFPTQFFKKVLDFLAKCLER 213
WS G ++ E+ T GR P+ + L+ +P + P + ++ + C +
Sbjct: 204 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQ----LMRLCWKE 259
Query: 214 KPEKR 218
+PE R
Sbjct: 260 RPEDR 264
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 43 EKTVNIFMEYMAGGSLLDVAEKFGGT-------LDAGVIRLYTKEILHGNGILHCDLKCN 95
++ + I EYM GSL+D + G LD + +H DL+
Sbjct: 88 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 147
Query: 96 NVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDI 155
N+L+ K+ D G AR + D N + + W APE + +D+
Sbjct: 148 NILVSDTLSCKIADFGLARLIED-----NEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 202
Query: 156 WSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKP-HFPTQFFKKVLDFLAKCLER 213
WS G ++ E+ T GR P+ + L+ +P + P + ++ + C +
Sbjct: 203 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQ----LMRLCWKE 258
Query: 214 KPEKR 218
+PE R
Sbjct: 259 RPEDR 263
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 43 EKTVNIFMEYMAGGSLLDVAEKFGGT-------LDAGVIRLYTKEILHGNGILHCDLKCN 95
++ + I EYM GSL+D + G LD + +H DL+
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 138
Query: 96 NVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDI 155
N+L+ K+ D G AR + D N + + W APE + +D+
Sbjct: 139 NILVSDTLSCKIADFGLARLIED-----NEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 156 WSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKP-HFPTQFFKKVLDFLAKCLER 213
WS G ++ E+ T GR P+ + L+ +P + P + ++ + C +
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQ----LMRLCWKE 249
Query: 214 KPEKR 218
+PE R
Sbjct: 250 RPEDR 254
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 43 EKTVNIFMEYMAGGSLLDVAEKFGGT-------LDAGVIRLYTKEILHGNGILHCDLKCN 95
++ + I EYM GSL+D + G LD + +H DL+
Sbjct: 84 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 143
Query: 96 NVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDI 155
N+L+ K+ D G AR + D N + + W APE + +D+
Sbjct: 144 NILVSDTLSCKIADFGLARLIED-----NEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 198
Query: 156 WSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKP-HFPTQFFKKVLDFLAKCLER 213
WS G ++ E+ T GR P+ + L+ +P + P + ++ + C +
Sbjct: 199 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQ----LMRLCWKE 254
Query: 214 KPEKR 218
+PE R
Sbjct: 255 RPEDR 259
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 70/187 (37%), Gaps = 45/187 (24%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR T+ + AP
Sbjct: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVVTRYYRAP 232
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATGRP--PWGDKIS--NAAATLLKIACS-------- 189
EV+ G DIWS+GC++ EM + P D I N L C
Sbjct: 233 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 292
Query: 190 ------NEKPH---------FPTQFF-----------KKVLDFLAKCLERKPEKRWSAEE 223
+P FP F + D L+K L P KR S ++
Sbjct: 293 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 352
Query: 224 LLNHTFI 230
L H +I
Sbjct: 353 ALQHPYI 359
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 90/230 (39%), Gaps = 21/230 (9%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNI----GRNGEKTVNIFMEYMAGGSLLDVA 62
A+ K+ S++ + EA + + P+I G E V I ME G L
Sbjct: 42 AIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL 101
Query: 63 EKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRV 116
+ +LD + LY ++ L +H D+ NVL+ S+ VKL D G +R +
Sbjct: 102 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 161
Query: 117 NDLKNNGNLKQSWQSIGGTQL-WMAPEVLRNEGLDFATDIWSLG-CMVIEMATGRPPWGD 174
D K G + WMAPE + A+D+W G CM + G P+
Sbjct: 162 EDSTXXKASK------GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 215
Query: 175 KISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
+N ++ + E+ P + + KC P +R EL
Sbjct: 216 VKNNDVIGRIE---NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 71/188 (37%), Gaps = 45/188 (23%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR T+ + AP
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVVTRYYRAP 195
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATGRP--PWGDKIS--NAAATLLKIACS-------- 189
EV+ G DIWS+GC++ EM + P D I N L C
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 255
Query: 190 ------NEKPH---------FPTQFF-----------KKVLDFLAKCLERKPEKRWSAEE 223
+P FP F + D L+K L P KR S ++
Sbjct: 256 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 315
Query: 224 LLNHTFIS 231
L H +I+
Sbjct: 316 ALQHPYIN 323
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 71/188 (37%), Gaps = 45/188 (23%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR T+ + AP
Sbjct: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVVTRYYRAP 232
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATGRP--PWGDKIS--NAAATLLKIACS-------- 189
EV+ G DIWS+GC++ EM + P D I N L C
Sbjct: 233 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 292
Query: 190 ------NEKPH---------FPTQFF-----------KKVLDFLAKCLERKPEKRWSAEE 223
+P FP F + D L+K L P KR S ++
Sbjct: 293 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 352
Query: 224 LLNHTFIS 231
L H +I+
Sbjct: 353 ALQHPYIN 360
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 93/220 (42%), Gaps = 33/220 (15%)
Query: 30 RQSLNSPNIGRNGEKTVNIFMEYMAGGSLLDV--AEKFGGTLDAGVIRLYTK-----EIL 82
R++ P + T+ I MEY +L D+ +E D RL+ + +
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDE-YWRLFRQILEALSYI 132
Query: 83 HGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN--------DLKNNGNLKQSWQSIGG 134
H GI+H DLK N+ + +VK+ D G A+ V+ D +N + S G
Sbjct: 133 HSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIG 192
Query: 135 TQLWMAPEVLRNEG-LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
T +++A EVL G + D++SLG + EM +++ N L ++
Sbjct: 193 TAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERV-NILKKLRSVSIE---- 247
Query: 194 HFPTQF-------FKKVLDFLAKCLERKPEKRWSAEELLN 226
FP F KK++ L ++ P KR A LLN
Sbjct: 248 -FPPDFDDNKMKVEKKIIRLL---IDHDPNKRPGARTLLN 283
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 79/185 (42%), Gaps = 28/185 (15%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDV 61
A+ +K+ +E + +EA I + PNI R + I EYM GSL
Sbjct: 81 AIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL--- 137
Query: 62 AEKFGGTLDAGVIRLYTKEILHGNG----------ILHCDLKCNNVLLGSHGDVKLPDLG 111
+ F T D + +L G G +H DL NVL+ S+ K+ D G
Sbjct: 138 -DTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFG 196
Query: 112 CARRVNDLKNNGNLKQSWQSIGG--TQLWMAPEVLRNEGLDFATDIWSLGCMVIE-MATG 168
+R + D + ++ + GG W APE + A+D+WS G ++ E +A G
Sbjct: 197 LSRVLED-----DPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYG 251
Query: 169 -RPPW 172
RP W
Sbjct: 252 ERPYW 256
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 91/232 (39%), Gaps = 25/232 (10%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNI----GRNGEKTVNIFMEYMAGGSLLDVA 62
A+ K+ S++ + EA + + P+I G E V I ME G L
Sbjct: 422 AIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL 481
Query: 63 EKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRV 116
+ +LD + LY ++ L +H D+ NVL+ S+ VKL D G +R +
Sbjct: 482 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541
Query: 117 NDLKNNGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLG-CMVIEMATGRPPW 172
D ++ +L WMAPE + A+D+W G CM + G P+
Sbjct: 542 ED--------STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593
Query: 173 GDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
+N ++ + E+ P + + KC P +R EL
Sbjct: 594 QGVKNNDVIGRIE---NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 71/188 (37%), Gaps = 45/188 (23%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR T+ + AP
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVVTRYYRAP 195
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATGRP--PWGDKIS--NAAATLLKIACS-------- 189
EV+ G DIWS+GC++ EM + P D I N L C
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 255
Query: 190 ------NEKPH---------FPTQFF-----------KKVLDFLAKCLERKPEKRWSAEE 223
+P FP F + D L+K L P KR S ++
Sbjct: 256 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 315
Query: 224 LLNHTFIS 231
L H +I+
Sbjct: 316 ALQHPYIN 323
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG 66
++ A S + + +EA + S+++P++ R TV + M+ M G LLD +
Sbjct: 53 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHK 112
Query: 67 GTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
+ + + + +I G L H DL NVL+ + VK+ D G A+ +
Sbjct: 113 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---- 168
Query: 121 NNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
G ++ + + GG WMA E + + +D+WS G V E+ T G P+ +
Sbjct: 169 --GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 226
Query: 178 NAAATLLK 185
+ +++L+
Sbjct: 227 SEISSILE 234
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 71/188 (37%), Gaps = 45/188 (23%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR T+ + AP
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVVTRYYRAP 194
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATGRP--PWGDKIS--NAAATLLKIACS-------- 189
EV+ G DIWS+GC++ EM + P D I N L C
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 190 ------NEKPH---------FPTQFF-----------KKVLDFLAKCLERKPEKRWSAEE 223
+P FP F + D L+K L P KR S ++
Sbjct: 255 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 314
Query: 224 LLNHTFIS 231
L H +I+
Sbjct: 315 ALQHPYIN 322
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 71/188 (37%), Gaps = 45/188 (23%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR T+ + AP
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVVTRYYRAP 194
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATGRP--PWGDKIS--NAAATLLKIACS-------- 189
EV+ G DIWS+GC++ EM + P D I N L C
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 190 ------NEKPH---------FPTQFF-----------KKVLDFLAKCLERKPEKRWSAEE 223
+P FP F + D L+K L P KR S ++
Sbjct: 255 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 314
Query: 224 LLNHTFIS 231
L H +I+
Sbjct: 315 ALQHPYIN 322
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H GI+H DLK N+ + ++K+ D G AR+ D + G + W + AP
Sbjct: 144 IHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQA-DSEMXGXVVTRW--------YRAP 194
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGR 169
EV+ N DIWS+GC++ EM TG+
Sbjct: 195 EVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 112/259 (43%), Gaps = 58/259 (22%)
Query: 21 QALRN-EAEIRQSLNSPNIGR-------NGEK----TVNIFMEYMAGGSLLDVAEKFG-- 66
+A +N E +I + L+ NI R +GEK +N+ ++Y+ ++ VA +
Sbjct: 57 KAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPA-TVYRVARHYSRA 115
Query: 67 -GTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDV-KLPDLGCARRVND 118
TL ++LY ++ +H GI H D+K N+LL V KL D G A+++
Sbjct: 116 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-- 173
Query: 119 LKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFAT--DIWSLGCMVIEMATGRP------ 170
++ N+ S ++ + APE++ D+ + D+WS GC++ E+ G+P
Sbjct: 174 VRGEPNV-----SXICSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 171 --------------PWGDKISNAAATLLKIACSNEKPHFPTQFFK-----KVLDFLAKCL 211
P ++I + A K H T+ F+ + + ++ L
Sbjct: 228 GVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLL 287
Query: 212 ERKPEKRWSAEELLNHTFI 230
E P R + E H+F
Sbjct: 288 EYTPTARLTPLEACAHSFF 306
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 71/188 (37%), Gaps = 45/188 (23%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR T+ + AP
Sbjct: 141 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVVTRYYRAP 193
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATGRP--PWGDKIS--NAAATLLKIACS-------- 189
EV+ G DIWS+GC++ EM + P D I N L C
Sbjct: 194 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 253
Query: 190 ------NEKPH---------FPTQFF-----------KKVLDFLAKCLERKPEKRWSAEE 223
+P FP F + D L+K L P KR S ++
Sbjct: 254 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 313
Query: 224 LLNHTFIS 231
L H +I+
Sbjct: 314 ALQHPYIN 321
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 24/177 (13%)
Query: 82 LHGNGILHCDLKCNNVLLGSHG-------------DVKLPDLGCARRVNDLKNNGNLKQS 128
LH I+H DLK N+L+ + + + D G ++++ + +
Sbjct: 131 LHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD--SGQXXFRXN 188
Query: 129 WQSIGGTQLWMAPEVLRNEG-------LDFATDIWSLGCMVIE-MATGRPPWGDKISNAA 180
+ GT W APE+L L + DI+S+GC+ ++ G+ P+GDK S +
Sbjct: 189 LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES 248
Query: 181 ATLLKIACSNE-KPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKK 236
+ I +E K + D +++ ++ P KR +A ++L H +KK
Sbjct: 249 NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKK 305
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG 66
++ A S + + +EA + S+++P++ R TV + M+ M G LLD +
Sbjct: 52 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHK 111
Query: 67 GTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
+ + + + +I G L H DL NVL+ + VK+ D G A+ +
Sbjct: 112 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---- 167
Query: 121 NNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
G ++ + + GG WMA E + + +D+WS G V E+ T G P+ +
Sbjct: 168 --GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 225
Query: 178 NAAATLLK 185
+ +++L+
Sbjct: 226 SEISSILE 233
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 75/178 (42%), Gaps = 37/178 (20%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
+H I+H DLK +N+ + ++K+ G AR +D + G + W + AP
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDD-EMTGYVATRW--------YRAP 191
Query: 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRP--PWGDKISN----------AAATLLKIAC 188
E++ N + DIWS+GC++ E+ TGR P D I A LLK
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 189 SNEKPHF-------PTQFFKKV--------LDFLAKCLERKPEKRWSAEELLNHTFIS 231
S ++ P F V +D L K L +KR +A + L H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 25/188 (13%)
Query: 2 NKGTGALFVVKSAESEAGV---QALRNEAEIRQSLNSPNI----GRNGEKTVNIFMEYMA 54
+KG VK+ + + + + +EA I ++L+ P+I G E+ I ME
Sbjct: 32 HKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYP 91
Query: 55 GGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLP 108
G L E+ +L + LY+ +I L H D+ N+L+ S VKL
Sbjct: 92 YGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLG 151
Query: 109 DLGCARRVNDLKNNGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLG-CMVIE 164
D G +R + D + + T+L WM+PE + A+D+W CM
Sbjct: 152 DFGLSRYIED--------EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEI 203
Query: 165 MATGRPPW 172
++ G+ P+
Sbjct: 204 LSFGKQPF 211
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 71/188 (37%), Gaps = 45/188 (23%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR T+ + AP
Sbjct: 136 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVVTRYYRAP 188
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATGRP--PWGDKIS--NAAATLLKIACS-------- 189
EV+ G DIWS+GC++ EM + P D I N L C
Sbjct: 189 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 248
Query: 190 ------NEKPH---------FPTQFF-----------KKVLDFLAKCLERKPEKRWSAEE 223
+P FP F + D L+K L P KR S ++
Sbjct: 249 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 308
Query: 224 LLNHTFIS 231
L H +I+
Sbjct: 309 ALQHPYIN 316
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 20/181 (11%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDV 61
A+ +K +E + EA I + PNI R K V I E M GSL
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSF 136
Query: 62 AEKFGGTLDA----GVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115
K G++R + L G +H DL N+L+ S+ K+ D G +R
Sbjct: 137 LRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 116 VNDLKNNGNLKQSWQSIGG--TQLWMAPEVLRNEGLDFATDIWSLGCMVIE-MATG-RPP 171
+ D + + ++ + GG W +PE + A+D+WS G ++ E M+ G RP
Sbjct: 197 LED-----DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 172 W 172
W
Sbjct: 252 W 252
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG 66
++ A S + + +EA + S+++P++ R TV + M+ M G LLD +
Sbjct: 53 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHK 112
Query: 67 GTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
+ + + + +I G L H DL NVL+ + VK+ D G A+ +
Sbjct: 113 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---- 168
Query: 121 NNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
G ++ + + GG WMA E + + +D+WS G V E+ T G P+ +
Sbjct: 169 --GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 226
Query: 178 NAAATLLK 185
+ +++L+
Sbjct: 227 SEISSILE 234
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 71/188 (37%), Gaps = 45/188 (23%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR T+ + AP
Sbjct: 136 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVVTRYYRAP 188
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATGRP--PWGDKIS--NAAATLLKIACS-------- 189
EV+ G DIWS+GC++ EM + P D I N L C
Sbjct: 189 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 248
Query: 190 ------NEKPH---------FPTQFF-----------KKVLDFLAKCLERKPEKRWSAEE 223
+P FP F + D L+K L P KR S ++
Sbjct: 249 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 308
Query: 224 LLNHTFIS 231
L H +I+
Sbjct: 309 ALQHPYIN 316
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 71/188 (37%), Gaps = 45/188 (23%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR T+ + AP
Sbjct: 135 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVVTRYYRAP 187
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATGRP--PWGDKIS--NAAATLLKIACS-------- 189
EV+ G DIWS+GC++ EM + P D I N L C
Sbjct: 188 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 247
Query: 190 ------NEKPH---------FPTQFF-----------KKVLDFLAKCLERKPEKRWSAEE 223
+P FP F + D L+K L P KR S ++
Sbjct: 248 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 307
Query: 224 LLNHTFIS 231
L H +I+
Sbjct: 308 ALQHPYIN 315
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG 66
++ A S + + +EA + S+++P++ R TV + M+ M G LLD +
Sbjct: 54 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHK 113
Query: 67 GTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
+ + + + +I G L H DL NVL+ + VK+ D G A+ +
Sbjct: 114 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---- 169
Query: 121 NNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
G ++ + + GG WMA E + + +D+WS G V E+ T G P+ +
Sbjct: 170 --GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 227
Query: 178 NAAATLLK 185
+ +++L+
Sbjct: 228 SEISSILE 235
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG 66
++ A S + + +EA + S+++P++ R TV + M+ M G LLD +
Sbjct: 55 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHK 114
Query: 67 GTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
+ + + + +I G L H DL NVL+ + VK+ D G A+ +
Sbjct: 115 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---- 170
Query: 121 NNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
G ++ + + GG WMA E + + +D+WS G V E+ T G P+ +
Sbjct: 171 --GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 228
Query: 178 NAAATLLK 185
+ +++L+
Sbjct: 229 SEISSILE 236
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG 66
++ A S + + +EA + S+++P++ R TV + M+ M G LLD +
Sbjct: 56 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHK 115
Query: 67 GTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
+ + + + +I G L H DL NVL+ + VK+ D G A+ +
Sbjct: 116 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---- 171
Query: 121 NNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
G ++ + + GG WMA E + + +D+WS G V E+ T G P+ +
Sbjct: 172 --GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 229
Query: 178 NAAATLLK 185
+ +++L+
Sbjct: 230 SEISSILE 237
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 20/181 (11%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDV 61
A+ +K +E + EA I + PNI R K V I E M GSL
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSF 136
Query: 62 AEKFGGTLDA----GVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115
K G++R + L G +H DL N+L+ S+ K+ D G +R
Sbjct: 137 LRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 116 VNDLKNNGNLKQSWQSIGG--TQLWMAPEVLRNEGLDFATDIWSLGCMVIE-MATG-RPP 171
+ D + + ++ + GG W +PE + A+D+WS G ++ E M+ G RP
Sbjct: 197 LED-----DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 172 W 172
W
Sbjct: 252 W 252
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG 66
++ A S + + +EA + S+++P++ R TV + M+ M G LLD +
Sbjct: 59 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHK 118
Query: 67 GTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
+ + + + +I G L H DL NVL+ + VK+ D G A+ +
Sbjct: 119 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---- 174
Query: 121 NNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
G ++ + + GG WMA E + + +D+WS G V E+ T G P+ +
Sbjct: 175 --GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 232
Query: 178 NAAATLLK 185
+ +++L+
Sbjct: 233 SEISSILE 240
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 25/188 (13%)
Query: 2 NKGTGALFVVKSAESEAGV---QALRNEAEIRQSLNSPNI----GRNGEKTVNIFMEYMA 54
+KG VK+ + + + + +EA I ++L+ P+I G E+ I ME
Sbjct: 48 HKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYP 107
Query: 55 GGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLP 108
G L E+ +L + LY+ +I L H D+ N+L+ S VKL
Sbjct: 108 YGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLG 167
Query: 109 DLGCARRVNDLKNNGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLG-CMVIE 164
D G +R + D + + T+L WM+PE + A+D+W CM
Sbjct: 168 DFGLSRYIED--------EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEI 219
Query: 165 MATGRPPW 172
++ G+ P+
Sbjct: 220 LSFGKQPF 227
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 20/181 (11%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDV 61
A+ +K +E + EA I + PNI R K V I E M GSL
Sbjct: 48 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSF 107
Query: 62 AEKFGGTLDA----GVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115
K G++R + L G +H DL N+L+ S+ K+ D G +R
Sbjct: 108 LRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 167
Query: 116 VNDLKNNGNLKQSWQSIGG--TQLWMAPEVLRNEGLDFATDIWSLGCMVIE-MATG-RPP 171
+ D + + ++ + GG W +PE + A+D+WS G ++ E M+ G RP
Sbjct: 168 LED-----DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 222
Query: 172 W 172
W
Sbjct: 223 W 223
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 20/161 (12%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR T+ + AP
Sbjct: 147 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVVTRYYRAP 199
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATGRP--PWGDKIS--NAAATLLKIACSNEKPHFPT 197
EV+ G D+WS+GC++ EM + P D I N L C
Sbjct: 200 EVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCP-------- 251
Query: 198 QFFKKVLDFLAKCLERKPEKR-WSAEELLNHTFISGNAKKN 237
+F KK+ + +E +P+ +S E+L +++ N
Sbjct: 252 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHN 292
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 25/188 (13%)
Query: 2 NKGTGALFVVKSAESEAGV---QALRNEAEIRQSLNSPNI----GRNGEKTVNIFMEYMA 54
+KG VK+ + + + + +EA I ++L+ P+I G E+ I ME
Sbjct: 36 HKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYP 95
Query: 55 GGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLP 108
G L E+ +L + LY+ +I L H D+ N+L+ S VKL
Sbjct: 96 YGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLG 155
Query: 109 DLGCARRVNDLKNNGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLG-CMVIE 164
D G +R + D + + T+L WM+PE + A+D+W CM
Sbjct: 156 DFGLSRYIED--------EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEI 207
Query: 165 MATGRPPW 172
++ G+ P+
Sbjct: 208 LSFGKQPF 215
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 20/161 (12%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR T+ + AP
Sbjct: 136 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVVTRYYRAP 188
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATGRP--PWGDKIS--NAAATLLKIACSNEKPHFPT 197
EV+ G D+WS+GC++ EM + P D I N L C
Sbjct: 189 EVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCP-------- 240
Query: 198 QFFKKVLDFLAKCLERKPEKR-WSAEELLNHTFISGNAKKN 237
+F KK+ + +E +P+ +S E+L +++ N
Sbjct: 241 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHN 281
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 91/230 (39%), Gaps = 38/230 (16%)
Query: 20 VQALRNEAEIRQSLNSPN------IGRNGEKTVNIFMEYMAGGSLLDVAEK--------- 64
V E I + + PN I E + + + YM G L +
Sbjct: 74 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 133
Query: 65 ---FGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN 121
FG + G+ L +K+ +H DL N +L VK+ D G AR + D +
Sbjct: 134 LIGFGLQVAKGMKYLASKKFVHR------DLAARNCMLDEKFTVKVADFGLARDMYDKE- 186
Query: 122 NGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
S + G +L WMA E L+ + +D+WS G ++ E+ T G PP+ D +
Sbjct: 187 ----YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 242
Query: 178 NAAATLLKIACSNEKPHF-PTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226
L +P + P ++ +L KC K E R S EL++
Sbjct: 243 FDITVYLLQGRRLLQPEYCPDPLYEVML----KCWHPKAEMRPSFSELVS 288
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 91/230 (39%), Gaps = 38/230 (16%)
Query: 20 VQALRNEAEIRQSLNSPN------IGRNGEKTVNIFMEYMAGGSLLDVAEK--------- 64
V E I + + PN I E + + + YM G L +
Sbjct: 70 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 129
Query: 65 ---FGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN 121
FG + G+ L +K+ +H DL N +L VK+ D G AR + D +
Sbjct: 130 LIGFGLQVAKGMKYLASKKFVHR------DLAARNCMLDEKFTVKVADFGLARDMYDKEY 183
Query: 122 NGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
S + G +L WMA E L+ + +D+WS G ++ E+ T G PP+ D +
Sbjct: 184 -----YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 238
Query: 178 NAAATLLKIACSNEKPHF-PTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226
L +P + P ++ +L KC K E R S EL++
Sbjct: 239 FDITVYLLQGRRLLQPEYCPDPLYEVML----KCWHPKAEMRPSFSELVS 284
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 91/230 (39%), Gaps = 38/230 (16%)
Query: 20 VQALRNEAEIRQSLNSPN------IGRNGEKTVNIFMEYMAGGSLLDVAEK--------- 64
V E I + + PN I E + + + YM G L +
Sbjct: 72 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 131
Query: 65 ---FGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN 121
FG + G+ L +K+ +H DL N +L VK+ D G AR + D +
Sbjct: 132 LIGFGLQVAKGMKYLASKKFVHR------DLAARNCMLDEKFTVKVADFGLARDMYDKEY 185
Query: 122 NGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
S + G +L WMA E L+ + +D+WS G ++ E+ T G PP+ D +
Sbjct: 186 -----YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 240
Query: 178 NAAATLLKIACSNEKPHF-PTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226
L +P + P ++ +L KC K E R S EL++
Sbjct: 241 FDITVYLLQGRRLLQPEYCPDPLYEVML----KCWHPKAEMRPSFSELVS 286
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 112/259 (43%), Gaps = 58/259 (22%)
Query: 21 QALRN-EAEIRQSLNSPNIGR-------NGEK----TVNIFMEYMAGGSLLDVAEKFG-- 66
+A +N E +I + L+ NI R +GEK +N+ ++Y+ ++ VA +
Sbjct: 57 KAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRA 115
Query: 67 -GTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDV-KLPDLGCARRVND 118
TL ++LY ++ +H GI H D+K N+LL V KL D G A+++
Sbjct: 116 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-- 173
Query: 119 LKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFAT--DIWSLGCMVIEMATGRP------ 170
++ N+ S ++ + APE++ D+ + D+WS GC++ E+ G+P
Sbjct: 174 VRGEPNV-----SYICSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 171 --------------PWGDKISNAAATLLKIACSNEKPHFPTQFFK-----KVLDFLAKCL 211
P ++I + A K H T+ F+ + + ++ L
Sbjct: 228 GVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLL 287
Query: 212 ERKPEKRWSAEELLNHTFI 230
E P R + E H+F
Sbjct: 288 EYTPTARLTPLEACAHSFF 306
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 91/230 (39%), Gaps = 38/230 (16%)
Query: 20 VQALRNEAEIRQSLNSPN------IGRNGEKTVNIFMEYMAGGSLLDVAEK--------- 64
V E I + + PN I E + + + YM G L +
Sbjct: 73 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 132
Query: 65 ---FGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN 121
FG + G+ L +K+ +H DL N +L VK+ D G AR + D +
Sbjct: 133 LIGFGLQVAKGMKYLASKKFVHR------DLAARNCMLDEKFTVKVADFGLARDMYDKEY 186
Query: 122 NGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
S + G +L WMA E L+ + +D+WS G ++ E+ T G PP+ D +
Sbjct: 187 -----YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 241
Query: 178 NAAATLLKIACSNEKPHF-PTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226
L +P + P ++ +L KC K E R S EL++
Sbjct: 242 FDITVYLLQGRRLLQPEYCPDPLYEVML----KCWHPKAEMRPSFSELVS 287
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 91/230 (39%), Gaps = 38/230 (16%)
Query: 20 VQALRNEAEIRQSLNSPN------IGRNGEKTVNIFMEYMAGGSLLDVAEK--------- 64
V E I + + PN I E + + + YM G L +
Sbjct: 75 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 134
Query: 65 ---FGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN 121
FG + G+ L +K+ +H DL N +L VK+ D G AR + D +
Sbjct: 135 LIGFGLQVAKGMKYLASKKFVHR------DLAARNCMLDEKFTVKVADFGLARDMYDKE- 187
Query: 122 NGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
S + G +L WMA E L+ + +D+WS G ++ E+ T G PP+ D +
Sbjct: 188 ----YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 243
Query: 178 NAAATLLKIACSNEKPHF-PTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226
L +P + P ++ +L KC K E R S EL++
Sbjct: 244 FDITVYLLQGRRLLQPEYCPDPLYEVML----KCWHPKAEMRPSFSELVS 289
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 20/161 (12%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR + T+ + AP
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMEPEVVTRYYRAP 194
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATGRP--PWGDKIS--NAAATLLKIACSNEKPHFPT 197
EV+ G D+WS+GC++ EM + P D I N L C
Sbjct: 195 EVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCP-------- 246
Query: 198 QFFKKVLDFLAKCLERKPEKR-WSAEELLNHTFISGNAKKN 237
+F KK+ + +E +P+ +S E+L +++ N
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHN 287
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 91/230 (39%), Gaps = 38/230 (16%)
Query: 20 VQALRNEAEIRQSLNSPN------IGRNGEKTVNIFMEYMAGGSLLDVAEK--------- 64
V E I + + PN I E + + + YM G L +
Sbjct: 74 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 133
Query: 65 ---FGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN 121
FG + G+ L +K+ +H DL N +L VK+ D G AR + D +
Sbjct: 134 LIGFGLQVAKGMKYLASKKFVHR------DLAARNCMLDEKFTVKVADFGLARDMYDKE- 186
Query: 122 NGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
S + G +L WMA E L+ + +D+WS G ++ E+ T G PP+ D +
Sbjct: 187 ----XXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 242
Query: 178 NAAATLLKIACSNEKPHF-PTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226
L +P + P ++ +L KC K E R S EL++
Sbjct: 243 FDITVYLLQGRRLLQPEYCPDPLYEVML----KCWHPKAEMRPSFSELVS 288
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 20/161 (12%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
LH GI+H DLK +N+++ S +K+ D G AR + T+ + AP
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMEPEVVTRYYRAP 194
Query: 142 EVLRNEGLDFATDIWSLGCMVIEMATGRP--PWGDKIS--NAAATLLKIACSNEKPHFPT 197
EV+ G DIWS+GC++ EM + P D I N L C
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCP-------- 246
Query: 198 QFFKKVLDFLAKCLERKPEKR-WSAEELLNHTFISGNAKKN 237
F KK+ + +E +P+ +S E+L +++ N
Sbjct: 247 AFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHN 287
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 92/230 (40%), Gaps = 38/230 (16%)
Query: 20 VQALRNEAEIRQSLNSPN------IGRNGEKTVNIFMEYMAGGSLLDVAEK--------- 64
V E I + + PN I E + + + YM G L +
Sbjct: 76 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 135
Query: 65 ---FGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN 121
FG + G+ L +K+ +H DL N +L VK+ D G AR + D +
Sbjct: 136 LIGFGLQVAKGMKFLASKKFVHR------DLAARNCMLDEKFTVKVADFGLARDMYDKEF 189
Query: 122 NGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
+ S + G +L WMA E L+ + +D+WS G ++ E+ T G PP+ D +
Sbjct: 190 D-----SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 244
Query: 178 NAAATLLKIACSNEKPHF-PTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226
L +P + P ++ +L KC K E R S EL++
Sbjct: 245 FDITVYLLQGRRLLQPEYCPDPLYEVML----KCWHPKAEMRPSFSELVS 290
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 91/230 (39%), Gaps = 38/230 (16%)
Query: 20 VQALRNEAEIRQSLNSPN------IGRNGEKTVNIFMEYMAGGSLLDVAEK--------- 64
V E I + + PN I E + + + YM G L +
Sbjct: 75 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 134
Query: 65 ---FGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN 121
FG + G+ L +K+ +H DL N +L VK+ D G AR + D +
Sbjct: 135 LIGFGLQVAKGMKYLASKKFVHR------DLAARNCMLDEKFTVKVADFGLARDMYDKE- 187
Query: 122 NGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
S + G +L WMA E L+ + +D+WS G ++ E+ T G PP+ D +
Sbjct: 188 ----YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 243
Query: 178 NAAATLLKIACSNEKPHF-PTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226
L +P + P ++ +L KC K E R S EL++
Sbjct: 244 FDITVYLLQGRRLLQPEYCPDPLYEVML----KCWHPKAEMRPSFSELVS 289
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 91/230 (39%), Gaps = 38/230 (16%)
Query: 20 VQALRNEAEIRQSLNSPN------IGRNGEKTVNIFMEYMAGGSLLDVAEK--------- 64
V E I + + PN I E + + + YM G L +
Sbjct: 94 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 153
Query: 65 ---FGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN 121
FG + G+ L +K+ +H DL N +L VK+ D G AR + D +
Sbjct: 154 LIGFGLQVAKGMKYLASKKFVHR------DLAARNCMLDEKFTVKVADFGLARDMYDKE- 206
Query: 122 NGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
S + G +L WMA E L+ + +D+WS G ++ E+ T G PP+ D +
Sbjct: 207 ----YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 262
Query: 178 NAAATLLKIACSNEKPHF-PTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226
L +P + P ++ +L KC K E R S EL++
Sbjct: 263 FDITVYLLQGRRLLQPEYCPDPLYEVML----KCWHPKAEMRPSFSELVS 308
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 92/230 (40%), Gaps = 38/230 (16%)
Query: 20 VQALRNEAEIRQSLNSPN------IGRNGEKTVNIFMEYMAGGSLLDVAEK--------- 64
V E I + + PN I E + + + YM G L +
Sbjct: 80 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 139
Query: 65 ---FGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN 121
FG + G+ L +K+ +H DL N +L VK+ D G AR + D +
Sbjct: 140 LIGFGLQVAKGMKFLASKKFVHR------DLAARNCMLDEKFTVKVADFGLARDMYDKEF 193
Query: 122 NGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
+ S + G +L WMA E L+ + +D+WS G ++ E+ T G PP+ D +
Sbjct: 194 D-----SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 248
Query: 178 NAAATLLKIACSNEKPHF-PTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226
L +P + P ++ +L KC K E R S EL++
Sbjct: 249 FDITVYLLQGRRLLQPEYCPDPLYEVML----KCWHPKAEMRPSFSELVS 294
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 91/230 (39%), Gaps = 38/230 (16%)
Query: 20 VQALRNEAEIRQSLNSPN------IGRNGEKTVNIFMEYMAGGSLLDVAEK--------- 64
V E I + + PN I E + + + YM G L +
Sbjct: 67 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 126
Query: 65 ---FGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN 121
FG + G+ L +K+ +H DL N +L VK+ D G AR + D +
Sbjct: 127 LIGFGLQVAKGMKYLASKKFVHR------DLAARNCMLDEKFTVKVADFGLARDMYDKEY 180
Query: 122 NGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
S + G +L WMA E L+ + +D+WS G ++ E+ T G PP+ D +
Sbjct: 181 -----YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 235
Query: 178 NAAATLLKIACSNEKPHF-PTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226
L +P + P ++ +L KC K E R S EL++
Sbjct: 236 FDITVYLLQGRRLLQPEYCPDPLYEVML----KCWHPKAEMRPSFSELVS 281
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 91/230 (39%), Gaps = 38/230 (16%)
Query: 20 VQALRNEAEIRQSLNSPN------IGRNGEKTVNIFMEYMAGGSLLDVAEK--------- 64
V E I + + PN I E + + + YM G L +
Sbjct: 93 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 152
Query: 65 ---FGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN 121
FG + G+ L +K+ +H DL N +L VK+ D G AR + D +
Sbjct: 153 LIGFGLQVAKGMKYLASKKFVHR------DLAARNCMLDEKFTVKVADFGLARDMYDKE- 205
Query: 122 NGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
S + G +L WMA E L+ + +D+WS G ++ E+ T G PP+ D +
Sbjct: 206 ----YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 261
Query: 178 NAAATLLKIACSNEKPHF-PTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226
L +P + P ++ +L KC K E R S EL++
Sbjct: 262 FDITVYLLQGRRLLQPEYCPDPLYEVML----KCWHPKAEMRPSFSELVS 307
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 92/230 (40%), Gaps = 38/230 (16%)
Query: 20 VQALRNEAEIRQSLNSPN------IGRNGEKTVNIFMEYMAGGSLLDVAEK--------- 64
V E I + + PN I E + + + YM G L +
Sbjct: 75 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 134
Query: 65 ---FGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN 121
FG + G+ L +K+ +H DL N +L VK+ D G AR + D +
Sbjct: 135 LIGFGLQVAKGMKFLASKKFVHR------DLAARNCMLDEKFTVKVADFGLARDMYDKEF 188
Query: 122 NGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
+ S + G +L WMA E L+ + +D+WS G ++ E+ T G PP+ D +
Sbjct: 189 D-----SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 243
Query: 178 NAAATLLKIACSNEKPHF-PTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226
L +P + P ++ +L KC K E R S EL++
Sbjct: 244 FDITVYLLQGRRLLQPEYCPDPLYEVML----KCWHPKAEMRPSFSELVS 289
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 19/188 (10%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG 66
++ A S + + +EA + S+++P++ R TV + M+ M G LLD +
Sbjct: 56 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHK 115
Query: 67 GTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
+ + + + +I L ++H DL NVL+ + VK+ D G A+ +
Sbjct: 116 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL---- 171
Query: 121 NNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
G ++ + + GG WMA E + + +D+WS G V E+ T G P+ +
Sbjct: 172 --GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 229
Query: 178 NAAATLLK 185
+ +++L+
Sbjct: 230 SEISSILE 237
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 19/183 (10%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDV 61
A+ +KS +E + +EA I + PN+ V I E+M GSL
Sbjct: 65 AIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSF 124
Query: 62 AEKFGGTLDA----GVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115
+ G G++R + L +H DL N+L+ S+ K+ D G +R
Sbjct: 125 LRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRF 184
Query: 116 VNDLKNNGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIE-MATGRPP 171
+ D ++ ++ S G ++ W APE ++ A+D+WS G ++ E M+ G P
Sbjct: 185 LEDDTSD----PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
Query: 172 WGD 174
+ D
Sbjct: 241 YWD 243
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 97/220 (44%), Gaps = 34/220 (15%)
Query: 19 GVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI 74
V+A EA + ++L + + ++ + I E+MA GSLLD + G+ +
Sbjct: 220 SVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGS-KQPLP 278
Query: 75 RL--YTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLK 126
+L ++ +I G + H DL+ N+L+ + K+ D G AR + +K
Sbjct: 279 KLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR----VGAKFPIK 334
Query: 127 QSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLK 185
W APE + +D+WS G +++E+ T GR P+ + L+
Sbjct: 335 -----------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE 383
Query: 186 IACSNEKP-HFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
+P + P + + + + +C + +PE+R + E +
Sbjct: 384 RGYRMPRPENCPEELY----NIMMRCWKNRPEERPTFEYI 419
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 92/230 (40%), Gaps = 38/230 (16%)
Query: 20 VQALRNEAEIRQSLNSPN------IGRNGEKTVNIFMEYMAGGSLLDVAEK--------- 64
V E I + + PN I E + + + YM G L +
Sbjct: 73 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 132
Query: 65 ---FGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN 121
FG + G+ L +K+ +H DL N +L VK+ D G AR + D +
Sbjct: 133 LIGFGLQVAKGMKFLASKKFVHR------DLAARNCMLDEKFTVKVADFGLARDMYDKEF 186
Query: 122 NGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
+ S + G +L WMA E L+ + +D+WS G ++ E+ T G PP+ D +
Sbjct: 187 D-----SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 241
Query: 178 NAAATLLKIACSNEKPHF-PTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226
L +P + P ++ +L KC K E R S EL++
Sbjct: 242 FDITVYLLQGRRLLQPEYCPDPLYEVML----KCWHPKAEMRPSFSELVS 287
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 92/230 (40%), Gaps = 38/230 (16%)
Query: 20 VQALRNEAEIRQSLNSPN------IGRNGEKTVNIFMEYMAGGSLLDVAEK--------- 64
V E I + + PN I E + + + YM G L +
Sbjct: 134 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 193
Query: 65 ---FGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN 121
FG + G+ L +K+ +H DL N +L VK+ D G AR + D +
Sbjct: 194 LIGFGLQVAKGMKFLASKKFVHR------DLAARNCMLDEKFTVKVADFGLARDMYDKEF 247
Query: 122 NGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
+ S + G +L WMA E L+ + +D+WS G ++ E+ T G PP+ D +
Sbjct: 248 D-----SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 302
Query: 178 NAAATLLKIACSNEKPHF-PTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226
L +P + P ++ +L KC K E R S EL++
Sbjct: 303 FDITVYLLQGRRLLQPEYCPDPLYEVML----KCWHPKAEMRPSFSELVS 348
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 81 ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMA 140
LH N +H D+K N+LL K+ D G AR + I GT + A
Sbjct: 139 FLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSR----IVGTTAYXA 194
Query: 141 PEVLRNEGLDFATDIWSLGCMVIEMATGRP 170
PE LR E + +DI+S G +++E+ TG P
Sbjct: 195 PEALRGE-ITPKSDIYSFGVVLLEIITGLP 223
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 19/188 (10%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG 66
++ A S + + +EA + S+++P++ R TV + M+ M G LLD +
Sbjct: 54 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHK 113
Query: 67 GTLDAGVIRLYTKEILHG------NGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
+ + + + +I G ++H DL NVL+ + VK+ D G A+ +
Sbjct: 114 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL---- 169
Query: 121 NNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
G ++ + + GG WMA E + + +D+WS G V E+ T G P+ +
Sbjct: 170 --GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 227
Query: 178 NAAATLLK 185
+ +++L+
Sbjct: 228 SEISSILE 235
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 92/230 (40%), Gaps = 38/230 (16%)
Query: 20 VQALRNEAEIRQSLNSPN------IGRNGEKTVNIFMEYMAGGSLLDVAEK--------- 64
V E I + + PN I E + + + YM G L +
Sbjct: 75 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 134
Query: 65 ---FGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN 121
FG + G+ L +K+ +H DL N +L VK+ D G AR + D +
Sbjct: 135 LIGFGLQVAKGMKFLASKKFVHR------DLAARNCMLDEKFTVKVADFGLARDMYDKEF 188
Query: 122 NGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
+ S + G +L WMA E L+ + +D+WS G ++ E+ T G PP+ D +
Sbjct: 189 D-----SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 243
Query: 178 NAAATLLKIACSNEKPHF-PTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226
L +P + P ++ +L KC K E R S EL++
Sbjct: 244 FDITVYLLQGRRLLQPEYCPDPLYEVML----KCWHPKAEMRPSFSELVS 289
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG 66
++ A S + + +EA + S+++P++ R TV + M+ M G LLD +
Sbjct: 54 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHK 113
Query: 67 GTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
+ + + + +I G L H DL NVL+ + VK+ D G A+ +
Sbjct: 114 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL---- 169
Query: 121 NNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
G ++ + + GG WMA E + + +D+WS G V E+ T G P+ +
Sbjct: 170 --GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 227
Query: 178 NAAATLLK 185
+ +++L+
Sbjct: 228 SEISSILE 235
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 81 ILHGNGILHCDLKCNNVLLGSHGDV-KLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL-- 137
L +H DL N+LL +HG + K+ D G AR + KN+ N + G +L
Sbjct: 183 FLASKNCIHRDLAARNILL-THGRITKICDFGLARHI---KNDSN----YVVKGNARLPV 234
Query: 138 -WMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPW-GDKISNAAATLLKIACSNEKP- 193
WMAPE + N F +D+WS G + E+ + G P+ G + + ++K P
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 294
Query: 194 HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226
H P + + D + C + P KR + ++++
Sbjct: 295 HAPAEMY----DIMKTCWDADPLKRPTFKQIVQ 323
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 90/232 (38%), Gaps = 25/232 (10%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNI----GRNGEKTVNIFMEYMAGGSLLDVA 62
A+ K+ S++ + EA + + P+I G E V I ME G L
Sbjct: 42 AIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL 101
Query: 63 EKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRV 116
+ +LD + LY ++ L +H D+ NVL+ + VKL D G +R +
Sbjct: 102 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM 161
Query: 117 NDLKNNGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLG-CMVIEMATGRPPW 172
D ++ +L WMAPE + A+D+W G CM + G P+
Sbjct: 162 ED--------STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
Query: 173 GDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
+N ++ + E+ P + + KC P +R EL
Sbjct: 214 QGVKNNDVIGRIE---NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 88/192 (45%), Gaps = 19/192 (9%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVA 62
A+ ++ A S + + +EA + S+++P++ R TV + + M G LLD
Sbjct: 82 AIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV 141
Query: 63 EKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRV 116
+ + + + + +I L ++H DL NVL+ + VK+ D G A+ +
Sbjct: 142 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 201
Query: 117 NDLKNNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWG 173
G ++ + + GG WMA E + + +D+WS G V E+ T G P+
Sbjct: 202 ------GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
Query: 174 DKISNAAATLLK 185
++ +++L+
Sbjct: 256 GIPASEISSILE 267
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 43 EKTVNIFMEYMAGGSLLDVAEKFGGT-------LDAGVIRLYTKEILHGNGILHCDLKCN 95
++ + I EYM GSL+D + G LD + +H +L+
Sbjct: 75 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAA 134
Query: 96 NVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDI 155
N+L+ K+ D G AR + D N + + W APE + +D+
Sbjct: 135 NILVSDTLSCKIADFGLARLIED-----NEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 189
Query: 156 WSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKP-HFPTQFFKKVLDFLAKCLER 213
WS G ++ E+ T GR P+ + L+ +P + P + ++ + C +
Sbjct: 190 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQ----LMRLCWKE 245
Query: 214 KPEKR 218
+PE R
Sbjct: 246 RPEDR 250
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 23/184 (12%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDV 61
A+ +K+ ++ + +EA I + PNI K V I EYM GSL
Sbjct: 61 AIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAF 120
Query: 62 AEKFGGTLDAGVIRLYTKEILHGNGI--------LHCDLKCNNVLLGSHGDVKLPDLGCA 113
K G VI+L G+G+ +H DL N+L+ S+ K+ D G +
Sbjct: 121 LRKNDGRFT--VIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMS 178
Query: 114 RRVNDLKNNGNLKQSWQSIGG--TQLWMAPEVLRNEGLDFATDIWSLGCMVIE-MATGRP 170
R + D + + ++ + GG W APE + A+D+WS G ++ E M+ G
Sbjct: 179 RVLED-----DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 233
Query: 171 PWGD 174
P+ D
Sbjct: 234 PYWD 237
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 19/182 (10%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDV 61
A+ +K+ ++ + +EA I + PNI K V I EYM GSL
Sbjct: 46 AIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAF 105
Query: 62 AEKFGGTLDA----GVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115
K G G++R + L +H DL N+L+ S+ K+ D G +R
Sbjct: 106 LRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRV 165
Query: 116 VNDLKNNGNLKQSWQSIGG--TQLWMAPEVLRNEGLDFATDIWSLGCMVIE-MATGRPPW 172
+ D + + ++ + GG W APE + A+D+WS G ++ E M+ G P+
Sbjct: 166 LED-----DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 220
Query: 173 GD 174
D
Sbjct: 221 WD 222
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 90/232 (38%), Gaps = 25/232 (10%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNI----GRNGEKTVNIFMEYMAGGSLLDVA 62
A+ K+ S++ + EA + + P+I G E V I ME G L
Sbjct: 422 AIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL 481
Query: 63 EKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRV 116
+ +LD + LY ++ L +H D+ NVL+ + VKL D G +R +
Sbjct: 482 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM 541
Query: 117 NDLKNNGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLG-CMVIEMATGRPPW 172
D ++ +L WMAPE + A+D+W G CM + G P+
Sbjct: 542 ED--------STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593
Query: 173 GDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224
+N ++ + E+ P + + KC P +R EL
Sbjct: 594 QGVKNNDVIGRIE---NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 92/230 (40%), Gaps = 38/230 (16%)
Query: 20 VQALRNEAEIRQSLNSPN------IGRNGEKTVNIFMEYMAGGSLLDVAEK--------- 64
V E I + + PN I E + + + YM G L +
Sbjct: 76 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 135
Query: 65 ---FGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN 121
FG + G+ L +K+ +H DL N +L VK+ D G AR + D +
Sbjct: 136 LIGFGLQVAKGMKFLASKKFVHR------DLAARNCMLDEKFTVKVADFGLARDMLDKEF 189
Query: 122 NGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
+ S + G +L WMA E L+ + +D+WS G ++ E+ T G PP+ D +
Sbjct: 190 D-----SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 244
Query: 178 NAAATLLKIACSNEKPHF-PTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226
L +P + P ++ +L KC K E R S EL++
Sbjct: 245 FDITVYLLQGRRLLQPEYCPDPLYEVML----KCWHPKAEMRPSFSELVS 290
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 19/182 (10%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDV 61
A+ +K+ ++ + +EA I + PNI K V I EYM GSL
Sbjct: 40 AIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAF 99
Query: 62 AEKFGGTLDA----GVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115
K G G++R + L +H DL N+L+ S+ K+ D G +R
Sbjct: 100 LRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRV 159
Query: 116 VNDLKNNGNLKQSWQSIGG--TQLWMAPEVLRNEGLDFATDIWSLGCMVIE-MATGRPPW 172
+ D + + ++ + GG W APE + A+D+WS G ++ E M+ G P+
Sbjct: 160 LED-----DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 214
Query: 173 GD 174
D
Sbjct: 215 WD 216
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 34/191 (17%)
Query: 21 QALRN-EAEIRQSLNSPNIGR-------NGEK----TVNIFMEYMAGGSLLDVAEKFG-- 66
+A +N E +I + L+ NI R +GEK +N+ ++Y+ ++ VA +
Sbjct: 57 KAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRA 115
Query: 67 -GTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDV-KLPDLGCARRVND 118
TL ++LY ++ +H GI H D+K N+LL V KL D G A+++
Sbjct: 116 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-- 173
Query: 119 LKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFAT--DIWSLGCMVIEMATGRPPW-GDK 175
++ N+ S ++ + APE++ D+ + D+WS GC++ E+ G+P + GD
Sbjct: 174 VRGEPNV-----SYICSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 176 ISNAAATLLKI 186
+ ++K+
Sbjct: 228 GVDQLVEIIKV 238
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 78/185 (42%), Gaps = 28/185 (15%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDV 61
A+ +K+ +E + +EA I + PNI R + I EYM GSL
Sbjct: 81 AIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL--- 137
Query: 62 AEKFGGTLDAGVIRLYTKEILHGNG----------ILHCDLKCNNVLLGSHGDVKLPDLG 111
+ F T D + +L G G +H DL NVL+ S+ K+ D G
Sbjct: 138 -DTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFG 196
Query: 112 CARRVNDLKNNGNLKQSWQSIGG--TQLWMAPEVLRNEGLDFATDIWSLGCMVIE-MATG 168
+R + D + + + GG W APE + A+D+WS G ++ E +A G
Sbjct: 197 LSRVLED-----DPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYG 251
Query: 169 -RPPW 172
RP W
Sbjct: 252 ERPYW 256
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 10/148 (6%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWM 139
E L +H DL NVL+ + +K+ D G AR +N++ N + WM
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVK----WM 226
Query: 140 APEVLRNEGLDFATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKIACSNEKPHFPT 197
APE L + +D+WS G ++ E+ T G P G + L K+ + P
Sbjct: 227 APEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE----LFKLLKEGHRMDKPA 282
Query: 198 QFFKKVLDFLAKCLERKPEKRWSAEELL 225
++ + C P +R + ++L+
Sbjct: 283 NCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 52/126 (41%), Gaps = 40/126 (31%)
Query: 74 IRLYTKEILHGNGIL------HCDLKCNNVLLGS-------------------------H 102
I+LY EIL L H DLK N+LL
Sbjct: 139 IKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKS 198
Query: 103 GDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMV 162
+KL D GCA +D SI T+ + APEV+ N G D ++D+WS GC++
Sbjct: 199 TGIKLIDFGCATFKSDYHG---------SIINTRQYRAPEVILNLGWDVSSDMWSFGCVL 249
Query: 163 IEMATG 168
E+ TG
Sbjct: 250 AELYTG 255
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG 66
++ A S + + +EA + S+++P++ R TV + + M G LLD +
Sbjct: 62 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK 121
Query: 67 GTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
+ + + + +I L ++H DL NVL+ + VK+ D G A+ +
Sbjct: 122 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---- 177
Query: 121 NNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
G ++ + + GG WMA E + + +D+WS G V E+ T G P+ +
Sbjct: 178 --GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 235
Query: 178 NAAATLLK 185
+ +++L+
Sbjct: 236 SEISSILE 243
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 103/241 (42%), Gaps = 51/241 (21%)
Query: 23 LRNEAEIRQSLNSPNIGRNGEKTVNIFMEYMAGGSLLDVAE----------KFGGTLDAG 72
LR+E I + S R+ + + Y GSL D + + ++ +G
Sbjct: 88 LRHE-NILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASG 146
Query: 73 VIRLYTKEILHGNG---ILHCDLKCNNVLLGSHGDVKLPDLGCA----RRVNDLKNNGNL 125
+ L+ EI G I H DLK N+L+ +G + DLG A + N L N
Sbjct: 147 LAHLHI-EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNP 205
Query: 126 KQSWQSIGGTQLWMAPEVLRNEGLDF-------ATDIWSLGCMVIEMA----------TG 168
+ GT+ +MAPEVL +E + DIW+ G ++ E+A
Sbjct: 206 RV------GTKRYMAPEVL-DETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDY 258
Query: 169 RPPWGDKISNAAA--TLLKIACSN-EKPHFPTQFFKK-VLDFLAK----CLERKPEKRWS 220
+PP+ D + N + + K+ C + ++P+ P ++F L LAK C + P R +
Sbjct: 259 KPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT 318
Query: 221 A 221
A
Sbjct: 319 A 319
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG 66
++ A S + + +EA + S+++P++ R TV + + M G LLD +
Sbjct: 46 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK 105
Query: 67 GTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
+ + + + +I L ++H DL NVL+ + VK+ D G A+ +
Sbjct: 106 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---- 161
Query: 121 NNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
G ++ + + GG WMA E + + +D+WS G V E+ T G P+ +
Sbjct: 162 --GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 219
Query: 178 NAAATLLK 185
+ +++L+
Sbjct: 220 SEISSILE 227
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 19/188 (10%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG 66
++ A S + + +EA + S+++P++ R TV + + M G LLD +
Sbjct: 49 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK 108
Query: 67 GTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
+ + + + +I G L H DL NVL+ + VK+ D G A+ +
Sbjct: 109 DNIGSQYLLNWCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---- 164
Query: 121 NNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
G ++ + + GG WMA E + + +D+WS G V E+ T G P+ +
Sbjct: 165 --GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 222
Query: 178 NAAATLLK 185
+ +++L+
Sbjct: 223 SEISSILE 230
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 102/237 (43%), Gaps = 43/237 (18%)
Query: 23 LRNEAEIRQSLNSPNIGRNGEKTVNIFMEYMAGGSLLDVAE----------KFGGTLDAG 72
LR+E I + S R+ + + Y GSL D + + ++ +G
Sbjct: 59 LRHE-NILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASG 117
Query: 73 VIRLYTKEILHGNG---ILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSW 129
+ L+ EI G I H DLK N+L+ +G + DLG A V ++ L
Sbjct: 118 LAHLHI-EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA--VMHSQSTNQLDVGN 174
Query: 130 QSIGGTQLWMAPEVLRNEGLDF-------ATDIWSLGCMVIEMA----------TGRPPW 172
GT+ +MAPEVL +E + DIW+ G ++ E+A +PP+
Sbjct: 175 NPRVGTKRYMAPEVL-DETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF 233
Query: 173 GDKISNAAA--TLLKIACSN-EKPHFPTQFFKK-VLDFLAK----CLERKPEKRWSA 221
D + N + + K+ C + ++P+ P ++F L LAK C + P R +A
Sbjct: 234 YDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTA 290
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 103/241 (42%), Gaps = 51/241 (21%)
Query: 23 LRNEAEIRQSLNSPNIGRNGEKTVNIFMEYMAGGSLLDVAE----------KFGGTLDAG 72
LR+E I + S R+ + + Y GSL D + + ++ +G
Sbjct: 59 LRHE-NILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASG 117
Query: 73 VIRLYTKEILHGNG---ILHCDLKCNNVLLGSHGDVKLPDLGCA----RRVNDLKNNGNL 125
+ L+ EI G I H DLK N+L+ +G + DLG A + N L N
Sbjct: 118 LAHLHI-EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNP 176
Query: 126 KQSWQSIGGTQLWMAPEVLRNEGLDF-------ATDIWSLGCMVIEMA----------TG 168
+ GT+ +MAPEVL +E + DIW+ G ++ E+A
Sbjct: 177 RV------GTKRYMAPEVL-DETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDY 229
Query: 169 RPPWGDKISNAAA--TLLKIACSN-EKPHFPTQFFKK-VLDFLAK----CLERKPEKRWS 220
+PP+ D + N + + K+ C + ++P+ P ++F L LAK C + P R +
Sbjct: 230 KPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT 289
Query: 221 A 221
A
Sbjct: 290 A 290
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 19/188 (10%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG 66
++ A S + + +EA + S+++P++ R TV + + M G LLD +
Sbjct: 58 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK 117
Query: 67 GTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
+ + + + +I G L H DL NVL+ + VK+ D G A+ +
Sbjct: 118 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---- 173
Query: 121 NNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
G ++ + + GG WMA E + + +D+WS G V E+ T G P+ +
Sbjct: 174 --GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 231
Query: 178 NAAATLLK 185
+ +++L+
Sbjct: 232 SEISSILE 239
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 19/188 (10%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG 66
++ A S + + +EA + S+++P++ R TV + + M G LLD +
Sbjct: 52 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHK 111
Query: 67 GTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
+ + + + +I G L H DL NVL+ + VK+ D G A+ +
Sbjct: 112 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---- 167
Query: 121 NNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
G ++ + + GG WMA E + + +D+WS G V E+ T G P+ +
Sbjct: 168 --GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 225
Query: 178 NAAATLLK 185
+ +++L+
Sbjct: 226 SEISSILE 233
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 19/188 (10%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG 66
++ A S + + +EA + S+++P++ R TV + + M G LLD +
Sbjct: 77 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK 136
Query: 67 GTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
+ + + + +I G L H DL NVL+ + VK+ D G A+ +
Sbjct: 137 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---- 192
Query: 121 NNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
G ++ + + GG WMA E + + +D+WS G V E+ T G P+ +
Sbjct: 193 --GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 250
Query: 178 NAAATLLK 185
+ +++L+
Sbjct: 251 SEISSILE 258
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG 66
++ A S + + +EA + S+++P++ R TV + + M G LLD +
Sbjct: 52 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK 111
Query: 67 GTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
+ + + + +I L ++H DL NVL+ + VK+ D G A+ +
Sbjct: 112 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---- 167
Query: 121 NNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
G ++ + + GG WMA E + + +D+WS G V E+ T G P+ +
Sbjct: 168 --GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 225
Query: 178 NAAATLLK 185
+ +++L+
Sbjct: 226 SEISSILE 233
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 19/188 (10%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG 66
++ A S + + +EA + S+++P++ R TV + + M G LLD +
Sbjct: 52 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK 111
Query: 67 GTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
+ + + + +I G L H DL NVL+ + VK+ D G A+ +
Sbjct: 112 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---- 167
Query: 121 NNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
G ++ + + GG WMA E + + +D+WS G V E+ T G P+ +
Sbjct: 168 --GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 225
Query: 178 NAAATLLK 185
+ +++L+
Sbjct: 226 SEISSILE 233
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 19/188 (10%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG 66
++ A S + + +EA + S+++P++ R TV + + M G LLD +
Sbjct: 55 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK 114
Query: 67 GTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
+ + + + +I G L H DL NVL+ + VK+ D G A+ +
Sbjct: 115 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---- 170
Query: 121 NNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
G ++ + + GG WMA E + + +D+WS G V E+ T G P+ +
Sbjct: 171 --GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 228
Query: 178 NAAATLLK 185
+ +++L+
Sbjct: 229 SEISSILE 236
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 91/185 (49%), Gaps = 33/185 (17%)
Query: 26 EAEIRQSLNSPNIGR-------NGEK----TVNIFMEYMAGGSLLDVAEKFG---GTLDA 71
E +I + L+ NI R +GEK +N+ ++Y+ ++ VA + TL
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 121
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDV-KLPDLGCARRVNDLKNNGN 124
++LY ++ +H GI H D+K N+LL V KL D G A+++ ++ N
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPN 179
Query: 125 LKQSWQSIGGTQLWMAPEVLRNEGLDFAT--DIWSLGCMVIEMATGRPPW-GDKISNAAA 181
+ S ++ + APE++ D+ + D+WS GC++ E+ G+P + GD +
Sbjct: 180 V-----SYICSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
Query: 182 TLLKI 186
++K+
Sbjct: 234 EIIKV 238
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 19/188 (10%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG 66
++ A S + + +EA + S+++P++ R TV + + M G LLD +
Sbjct: 54 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK 113
Query: 67 GTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
+ + + + +I G L H DL NVL+ + VK+ D G A+ +
Sbjct: 114 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---- 169
Query: 121 NNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
G ++ + + GG WMA E + + +D+WS G V E+ T G P+ +
Sbjct: 170 --GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 227
Query: 178 NAAATLLK 185
+ +++L+
Sbjct: 228 SEISSILE 235
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 82 LHGNGILHCDLKCNNVLL----GSHGDVKLPDLGCARRVND-LKNNGNLKQSWQSIGGTQ 136
LH N +LH DLK N+L+ G VK+ D+G AR N LK +L + T
Sbjct: 144 LHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADL----DPVVVTF 199
Query: 137 LWMAPEVLRN-EGLDFATDIWSLGCMVIEMATGRP 170
+ APE+L A DIW++GC+ E+ T P
Sbjct: 200 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 234
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 73/171 (42%), Gaps = 29/171 (16%)
Query: 20 VQALRNEAEIRQSLNSPNIGRNGEK-----TVNIFMEYMAGGSLLD--VAEKFGGTLDAG 72
V + E EI +SL+ PNI R E + + ME GG L + V ++ DA
Sbjct: 50 VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA 109
Query: 73 VIRLYTKEIL------HGNGILHCDLKCNNVLL---GSHGDVKLPDLGCARRVNDLKNNG 123
I K++L H + H DLK N L +KL D G A R K
Sbjct: 110 RI---MKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK--- 163
Query: 124 NLKQSWQSIGGTQLWMAPEVLRNEGL-DFATDIWSLGCMVIEMATGRPPWG 173
++ GT +++P+VL EGL D WS G M+ + G PP+
Sbjct: 164 ----MMRTKVGTPYYVSPQVL--EGLYGPECDEWSAGVMMYVLLCGYPPFS 208
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 73/171 (42%), Gaps = 29/171 (16%)
Query: 20 VQALRNEAEIRQSLNSPNIGRNGEK-----TVNIFMEYMAGGSLLD--VAEKFGGTLDAG 72
V + E EI +SL+ PNI R E + + ME GG L + V ++ DA
Sbjct: 67 VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA 126
Query: 73 VIRLYTKEIL------HGNGILHCDLKCNNVLL---GSHGDVKLPDLGCARRVNDLKNNG 123
I K++L H + H DLK N L +KL D G A R K
Sbjct: 127 RI---MKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK--- 180
Query: 124 NLKQSWQSIGGTQLWMAPEVLRNEGLDFAT-DIWSLGCMVIEMATGRPPWG 173
++ GT +++P+VL EGL D WS G M+ + G PP+
Sbjct: 181 ----MMRTKVGTPYYVSPQVL--EGLYGPECDEWSAGVMMYVLLCGYPPFS 225
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 57/253 (22%)
Query: 26 EAEIRQSLNSPNIGR-------NGEK----TVNIFMEYMAGGSLLDVAEKFG---GTLDA 71
E +I + L+ NI R +GEK +N+ ++Y+ ++ VA + TL
Sbjct: 142 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 200
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDV-KLPDLGCARRVNDLKNNGN 124
++LY ++ +H GI H D+K N+LL V KL D G A+++ ++ N
Sbjct: 201 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPN 258
Query: 125 LKQSWQSIGGTQLWMAPEVLRNEGLDFAT--DIWSLGCMVIEMATGRPPW-GDKISNAAA 181
+ S ++ + APE++ D+ + D+WS GC++ E+ G+P + GD +
Sbjct: 259 V-----SYICSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 312
Query: 182 TLLKIACSNEKPH------------FP-------TQFFK-----KVLDFLAKCLERKPEK 217
++K+ + + FP T+ F+ + + ++ LE P
Sbjct: 313 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 372
Query: 218 RWSAEELLNHTFI 230
R + E H+F
Sbjct: 373 RLTPLEACAHSFF 385
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 57/253 (22%)
Query: 26 EAEIRQSLNSPNIGR-------NGEK----TVNIFMEYMAGGSLLDVAEKFG---GTLDA 71
E +I + L+ NI R +GEK +N+ ++Y+ ++ VA + TL
Sbjct: 91 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 149
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDV-KLPDLGCARRVNDLKNNGN 124
++LY ++ +H GI H D+K N+LL V KL D G A+++ ++ N
Sbjct: 150 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPN 207
Query: 125 LKQSWQSIGGTQLWMAPEVLRNEGLDFAT--DIWSLGCMVIEMATGRPPW-GDKISNAAA 181
+ S ++ + APE++ D+ + D+WS GC++ E+ G+P + GD +
Sbjct: 208 V-----SYICSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 261
Query: 182 TLLKIACSNEKPH------------FP-------TQFFK-----KVLDFLAKCLERKPEK 217
++K+ + + FP T+ F+ + + ++ LE P
Sbjct: 262 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 321
Query: 218 RWSAEELLNHTFI 230
R + E H+F
Sbjct: 322 RLTPLEACAHSFF 334
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG 66
++ A S + + +EA + S+++P++ R TV + + M G LLD +
Sbjct: 52 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK 111
Query: 67 GTLDAGVIRLYTKEILHG------NGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
+ + + + +I G ++H DL NVL+ + VK+ D G A+ +
Sbjct: 112 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---- 167
Query: 121 NNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
G ++ + + GG WMA E + + +D+WS G V E+ T G P+ +
Sbjct: 168 --GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 225
Query: 178 NAAATLLK 185
+ +++L+
Sbjct: 226 SEISSILE 233
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 19/188 (10%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG 66
++ A S + + +EA + S+++P++ R TV + + M G LLD +
Sbjct: 59 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK 118
Query: 67 GTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
+ + + + +I G L H DL NVL+ + VK+ D G A+ +
Sbjct: 119 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---- 174
Query: 121 NNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
G ++ + + GG WMA E + + +D+WS G V E+ T G P+ +
Sbjct: 175 --GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 232
Query: 178 NAAATLLK 185
+ +++L+
Sbjct: 233 SEISSILE 240
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 19/188 (10%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG 66
++ A S + + +EA + S+++P++ R TV + + M G LLD +
Sbjct: 55 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK 114
Query: 67 GTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
+ + + + +I G L H DL NVL+ + VK+ D G A+ +
Sbjct: 115 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---- 170
Query: 121 NNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
G ++ + + GG WMA E + + +D+WS G V E+ T G P+ +
Sbjct: 171 --GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 228
Query: 178 NAAATLLK 185
+ +++L+
Sbjct: 229 SEISSILE 236
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 19/188 (10%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG 66
++ A S + + +EA + S+++P++ R TV + + M G LLD +
Sbjct: 55 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK 114
Query: 67 GTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
+ + + + +I G L H DL NVL+ + VK+ D G A+ +
Sbjct: 115 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---- 170
Query: 121 NNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
G ++ + + GG WMA E + + +D+WS G V E+ T G P+ +
Sbjct: 171 --GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 228
Query: 178 NAAATLLK 185
+ +++L+
Sbjct: 229 SEISSILE 236
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 57/253 (22%)
Query: 26 EAEIRQSLNSPNIGR-------NGEKT----VNIFMEYMAGGSLLDVAEKFG---GTLDA 71
E +I + L+ NI R +GEK +N+ ++Y+ ++ VA + TL
Sbjct: 97 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 155
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDV-KLPDLGCARRVNDLKNNGN 124
++LY ++ +H GI H D+K N+LL V KL D G A+++ ++ N
Sbjct: 156 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPN 213
Query: 125 LKQSWQSIGGTQLWMAPEVLRNEGLDFAT--DIWSLGCMVIEMATGRPPW-GDKISNAAA 181
+ S ++ + APE++ D+ + D+WS GC++ E+ G+P + GD +
Sbjct: 214 V-----SYICSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 267
Query: 182 TLLKIACSNEKPH------------FP-------TQFFK-----KVLDFLAKCLERKPEK 217
++K+ + + FP T+ F+ + + ++ LE P
Sbjct: 268 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 327
Query: 218 RWSAEELLNHTFI 230
R + E H+F
Sbjct: 328 RLTPLEACAHSFF 340
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 57/253 (22%)
Query: 26 EAEIRQSLNSPNIGR-------NGEK----TVNIFMEYMAGGSLLDVAEKFG---GTLDA 71
E +I + L+ NI R +GEK +N+ ++Y+ ++ VA + TL
Sbjct: 68 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 126
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDV-KLPDLGCARRVNDLKNNGN 124
++LY ++ +H GI H D+K N+LL V KL D G A+++ ++ N
Sbjct: 127 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPN 184
Query: 125 LKQSWQSIGGTQLWMAPEVLRNEGLDFAT--DIWSLGCMVIEMATGRPPW-GDKISNAAA 181
+ S ++ + APE++ D+ + D+WS GC++ E+ G+P + GD +
Sbjct: 185 V-----SYICSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 238
Query: 182 TLLKIACSNEKPH------------FP-------TQFFK-----KVLDFLAKCLERKPEK 217
++K+ + + FP T+ F+ + + ++ LE P
Sbjct: 239 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 298
Query: 218 RWSAEELLNHTFI 230
R + E H+F
Sbjct: 299 RLTPLEACAHSFF 311
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 91/185 (49%), Gaps = 33/185 (17%)
Query: 26 EAEIRQSLNSPNIGR-------NGEK----TVNIFMEYMAGGSLLDVAEKFG---GTLDA 71
E +I + L+ NI R +GEK +N+ ++Y+ ++ VA + TL
Sbjct: 76 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 134
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDV-KLPDLGCARRVNDLKNNGN 124
++LY ++ +H GI H D+K N+LL V KL D G A+++ ++ N
Sbjct: 135 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPN 192
Query: 125 LKQSWQSIGGTQLWMAPEVLRNEGLDFAT--DIWSLGCMVIEMATGRPPW-GDKISNAAA 181
+ S ++ + APE++ D+ + D+WS GC++ E+ G+P + GD +
Sbjct: 193 V-----SYICSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 246
Query: 182 TLLKI 186
++K+
Sbjct: 247 EIIKV 251
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 91/185 (49%), Gaps = 33/185 (17%)
Query: 26 EAEIRQSLNSPNIGR-------NGEK----TVNIFMEYMAGGSLLDVAEKFG---GTLDA 71
E +I + L+ NI R +GEK +N+ ++Y+ ++ VA + TL
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 121
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDV-KLPDLGCARRVNDLKNNGN 124
++LY ++ +H GI H D+K N+LL V KL D G A+++ ++ N
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPN 179
Query: 125 LKQSWQSIGGTQLWMAPEVLRNEGLDFAT--DIWSLGCMVIEMATGRPPW-GDKISNAAA 181
+ S ++ + APE++ D+ + D+WS GC++ E+ G+P + GD +
Sbjct: 180 V-----SXICSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
Query: 182 TLLKI 186
++K+
Sbjct: 234 EIIKV 238
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 19/188 (10%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG 66
++ A S + + +EA + S+++P++ R TV + + M G LLD +
Sbjct: 59 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK 118
Query: 67 GTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
+ + + + +I G L H DL NVL+ + VK+ D G A+ +
Sbjct: 119 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---- 174
Query: 121 NNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
G ++ + + GG WMA E + + +D+WS G V E+ T G P+ +
Sbjct: 175 --GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 232
Query: 178 NAAATLLK 185
+ +++L+
Sbjct: 233 SEISSILE 240
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 57/253 (22%)
Query: 26 EAEIRQSLNSPNIGR-------NGEKT----VNIFMEYMAGGSLLDVAEKFG---GTLDA 71
E +I + L+ NI R +GEK +N+ ++Y+ ++ VA + TL
Sbjct: 99 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 157
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDV-KLPDLGCARRVNDLKNNGN 124
++LY ++ +H GI H D+K N+LL V KL D G A+++ ++ N
Sbjct: 158 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPN 215
Query: 125 LKQSWQSIGGTQLWMAPEVLRNEGLDFAT--DIWSLGCMVIEMATGRPPW-GDKISNAAA 181
+ S ++ + APE++ D+ + D+WS GC++ E+ G+P + GD +
Sbjct: 216 V-----SYICSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 269
Query: 182 TLLKIACSNEKPH------------FP-------TQFFK-----KVLDFLAKCLERKPEK 217
++K+ + + FP T+ F+ + + ++ LE P
Sbjct: 270 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 329
Query: 218 RWSAEELLNHTFI 230
R + E H+F
Sbjct: 330 RLTPLEACAHSFF 342
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 91/185 (49%), Gaps = 33/185 (17%)
Query: 26 EAEIRQSLNSPNIGR-------NGEK----TVNIFMEYMAGGSLLDVAEKFG---GTLDA 71
E +I + L+ NI R +GEK +N+ ++Y+ ++ VA + TL
Sbjct: 64 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 122
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDV-KLPDLGCARRVNDLKNNGN 124
++LY ++ +H GI H D+K N+LL V KL D G A+++ ++ N
Sbjct: 123 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPN 180
Query: 125 LKQSWQSIGGTQLWMAPEVLRNEGLDFAT--DIWSLGCMVIEMATGRPPW-GDKISNAAA 181
+ S ++ + APE++ D+ + D+WS GC++ E+ G+P + GD +
Sbjct: 181 V-----SXICSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 234
Query: 182 TLLKI 186
++K+
Sbjct: 235 EIIKV 239
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 47/107 (43%), Gaps = 24/107 (22%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNG------------------ 123
+H GILH DLK N L+ VK+ D G AR V D NG
Sbjct: 172 VHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTV-DYPENGNSQLPISPREDDMNLVTF 230
Query: 124 ----NLKQSWQSIGGTQLWMAPE-VLRNEGLDFATDIWSLGCMVIEM 165
NLK+ T+ + APE +L E A D+WS+GC+ E+
Sbjct: 231 PHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAEL 277
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 91/186 (48%), Gaps = 33/186 (17%)
Query: 25 NEAEIRQSLNSPNIGR-------NGEK----TVNIFMEYMAGGSLLDVAEKFG---GTLD 70
E +I + L+ NI R +GEK +N+ ++Y+ ++ VA + TL
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLP 120
Query: 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDV-KLPDLGCARRVNDLKNNG 123
++LY ++ +H GI H D+K N+LL V KL D G A+++ ++
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEP 178
Query: 124 NLKQSWQSIGGTQLWMAPEVLRNEGLDFAT--DIWSLGCMVIEMATGRPPW-GDKISNAA 180
N+ S ++ + APE++ D+ + D+WS GC++ E+ G+P + GD +
Sbjct: 179 NV-----SXICSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232
Query: 181 ATLLKI 186
++K+
Sbjct: 233 VEIIKV 238
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 57/253 (22%)
Query: 26 EAEIRQSLNSPNIGR-------NGEKT----VNIFMEYMAGGSLLDVAEKFG---GTLDA 71
E +I + L+ NI R +GEK +N+ ++Y+ ++ VA + TL
Sbjct: 101 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 159
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDV-KLPDLGCARRVNDLKNNGN 124
++LY ++ +H GI H D+K N+LL V KL D G A+++ ++ N
Sbjct: 160 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPN 217
Query: 125 LKQSWQSIGGTQLWMAPEVLRNEGLDFAT--DIWSLGCMVIEMATGRPPW-GDKISNAAA 181
+ S ++ + APE++ D+ + D+WS GC++ E+ G+P + GD +
Sbjct: 218 V-----SYICSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 271
Query: 182 TLLKIACSNEKPH------------FP-------TQFFK-----KVLDFLAKCLERKPEK 217
++K+ + + FP T+ F+ + + ++ LE P
Sbjct: 272 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 331
Query: 218 RWSAEELLNHTFI 230
R + E H+F
Sbjct: 332 RLTPLEACAHSFF 344
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 91/185 (49%), Gaps = 33/185 (17%)
Query: 26 EAEIRQSLNSPNIGR-------NGEK----TVNIFMEYMAGGSLLDVAEKFG---GTLDA 71
E +I + L+ NI R +GEK +N+ ++Y+ ++ VA + TL
Sbjct: 75 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 133
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDV-KLPDLGCARRVNDLKNNGN 124
++LY ++ +H GI H D+K N+LL V KL D G A+++ ++ N
Sbjct: 134 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPN 191
Query: 125 LKQSWQSIGGTQLWMAPEVLRNEGLDFAT--DIWSLGCMVIEMATGRPPW-GDKISNAAA 181
+ S ++ + APE++ D+ + D+WS GC++ E+ G+P + GD +
Sbjct: 192 V-----SXICSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 245
Query: 182 TLLKI 186
++K+
Sbjct: 246 EIIKV 250
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 91/185 (49%), Gaps = 33/185 (17%)
Query: 26 EAEIRQSLNSPNIGR-------NGEK----TVNIFMEYMAGGSLLDVAEKFG---GTLDA 71
E +I + L+ NI R +GEK +N+ ++Y+ ++ VA + TL
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 121
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDV-KLPDLGCARRVNDLKNNGN 124
++LY ++ +H GI H D+K N+LL V KL D G A+++ ++ N
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPN 179
Query: 125 LKQSWQSIGGTQLWMAPEVLRNEGLDFAT--DIWSLGCMVIEMATGRPPW-GDKISNAAA 181
+ S ++ + APE++ D+ + D+WS GC++ E+ G+P + GD +
Sbjct: 180 V-----SXICSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
Query: 182 TLLKI 186
++K+
Sbjct: 234 EIIKV 238
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 91/185 (49%), Gaps = 33/185 (17%)
Query: 26 EAEIRQSLNSPNIGR-------NGEK----TVNIFMEYMAGGSLLDVAEKFG---GTLDA 71
E +I + L+ NI R +GEK +N+ ++Y+ ++ VA + TL
Sbjct: 71 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 129
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDV-KLPDLGCARRVNDLKNNGN 124
++LY ++ +H GI H D+K N+LL V KL D G A+++ ++ N
Sbjct: 130 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPN 187
Query: 125 LKQSWQSIGGTQLWMAPEVLRNEGLDFAT--DIWSLGCMVIEMATGRPPW-GDKISNAAA 181
+ S ++ + APE++ D+ + D+WS GC++ E+ G+P + GD +
Sbjct: 188 V-----SXICSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 241
Query: 182 TLLKI 186
++K+
Sbjct: 242 EIIKV 246
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 91/185 (49%), Gaps = 33/185 (17%)
Query: 26 EAEIRQSLNSPNIGR-------NGEK----TVNIFMEYMAGGSLLDVAEKFG---GTLDA 71
E +I + L+ NI R +GEK +N+ ++Y+ ++ VA + TL
Sbjct: 75 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 133
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDV-KLPDLGCARRVNDLKNNGN 124
++LY ++ +H GI H D+K N+LL V KL D G A+++ ++ N
Sbjct: 134 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPN 191
Query: 125 LKQSWQSIGGTQLWMAPEVLRNEGLDFAT--DIWSLGCMVIEMATGRPPW-GDKISNAAA 181
+ S ++ + APE++ D+ + D+WS GC++ E+ G+P + GD +
Sbjct: 192 V-----SXICSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 245
Query: 182 TLLKI 186
++K+
Sbjct: 246 EIIKV 250
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 91/185 (49%), Gaps = 33/185 (17%)
Query: 26 EAEIRQSLNSPNIGR-------NGEK----TVNIFMEYMAGGSLLDVAEKFG---GTLDA 71
E +I + L+ NI R +GEK +N+ ++Y+ ++ VA + TL
Sbjct: 82 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 140
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDV-KLPDLGCARRVNDLKNNGN 124
++LY ++ +H GI H D+K N+LL V KL D G A+++ ++ N
Sbjct: 141 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPN 198
Query: 125 LKQSWQSIGGTQLWMAPEVLRNEGLDFAT--DIWSLGCMVIEMATGRPPW-GDKISNAAA 181
+ S ++ + APE++ D+ + D+WS GC++ E+ G+P + GD +
Sbjct: 199 V-----SXICSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 252
Query: 182 TLLKI 186
++K+
Sbjct: 253 EIIKV 257
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 26/156 (16%)
Query: 46 VNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTK-----EILHGNGILHCDLKCNNVLLG 100
+ + +EY AG L D + + R + + E H + I+H DLK N+LL
Sbjct: 89 IIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD 147
Query: 101 SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFA---TDIWS 157
H +VK+ D G ++++ +GN ++ G+ + APEV+ G +A D+WS
Sbjct: 148 EHLNVKIADFG----LSNIMTDGNF---LKTSCGSPNYAAPEVI--SGKLYAGPEVDVWS 198
Query: 158 LGCMVIEMATGRPPWGDK--------ISNAAATLLK 185
G ++ M R P+ D+ ISN TL K
Sbjct: 199 CGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK 234
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 57/253 (22%)
Query: 26 EAEIRQSLNSPNIGR-------NGEKT----VNIFMEYMAGGSLLDVAEKFG---GTLDA 71
E +I + L+ NI R +GEK +N+ ++Y+ ++ VA + TL
Sbjct: 97 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV 155
Query: 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDV-KLPDLGCARRVNDLKNNGN 124
++LY ++ +H GI H D+K N+LL V KL D G A+++ ++ N
Sbjct: 156 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPN 213
Query: 125 LKQSWQSIGGTQLWMAPEVLRNEGLDFAT--DIWSLGCMVIEMATGRPPW-GDKISNAAA 181
+ S ++ + APE++ D+ + D+WS GC++ E+ G+P + GD +
Sbjct: 214 V-----SXICSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 267
Query: 182 TLLKIACSNEKPH------------FP-------TQFFK-----KVLDFLAKCLERKPEK 217
++K+ + + FP T+ F+ + + ++ LE P
Sbjct: 268 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 327
Query: 218 RWSAEELLNHTFI 230
R + E H+F
Sbjct: 328 RLTPLEACAHSFF 340
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 91/186 (48%), Gaps = 33/186 (17%)
Query: 25 NEAEIRQSLNSPNIGR-------NGEK----TVNIFMEYMAGGSLLDVAEKFG---GTLD 70
E +I + L+ NI R +GEK +N+ ++Y+ ++ VA + TL
Sbjct: 66 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLP 124
Query: 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDV-KLPDLGCARRVNDLKNNG 123
++LY ++ +H GI H D+K N+LL V KL D G A+++ ++
Sbjct: 125 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEP 182
Query: 124 NLKQSWQSIGGTQLWMAPEVLRNEGLDFAT--DIWSLGCMVIEMATGRPPW-GDKISNAA 180
N+ S ++ + APE++ D+ + D+WS GC++ E+ G+P + GD +
Sbjct: 183 NV-----SXICSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 236
Query: 181 ATLLKI 186
++K+
Sbjct: 237 VEIIKV 242
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 33/185 (17%)
Query: 24 RNEAEIR--QSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRL 76
R E EI + L P+I + + + + +EY AG L D + + R
Sbjct: 50 RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRF 108
Query: 77 YTK-----EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQS 131
+ + E H + I+H DLK N+LL H +VK+ D G ++++ +GN ++
Sbjct: 109 FQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFG----LSNIMTDGNF---LKT 161
Query: 132 IGGTQLWMAPEVLRNEGLDFA---TDIWSLGCMVIEMATGRPPWGDK--------ISNAA 180
G+ + APEV+ G +A D+WS G ++ M R P+ D+ ISN
Sbjct: 162 SCGSPNYAAPEVI--SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV 219
Query: 181 ATLLK 185
TL K
Sbjct: 220 YTLPK 224
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 26/156 (16%)
Query: 46 VNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTK-----EILHGNGILHCDLKCNNVLLG 100
+ + +EY AG L D + + R + + E H + I+H DLK N+LL
Sbjct: 88 IIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD 146
Query: 101 SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFA---TDIWS 157
H +VK+ D G ++++ +GN ++ G+ + APEV+ G +A D+WS
Sbjct: 147 EHLNVKIADFG----LSNIMTDGNF---LKTSCGSPNYAAPEVI--SGKLYAGPEVDVWS 197
Query: 158 LGCMVIEMATGRPPWGDK--------ISNAAATLLK 185
G ++ M R P+ D+ ISN TL K
Sbjct: 198 CGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK 233
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 20/153 (13%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK-----NNGNLKQSWQSIGG 134
E L +H DL NVL+ + +K+ D G AR +N++ NG L
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK------ 224
Query: 135 TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKIACSNEK 192
WMAPE L + +D+WS G ++ E+ T G P G + L K+ +
Sbjct: 225 ---WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE----LFKLLKEGHR 277
Query: 193 PHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
P ++ + C P +R + ++L+
Sbjct: 278 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 20/153 (13%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK-----NNGNLKQSWQSIGG 134
E L +H DL NVL+ + +K+ D G AR +N++ NG L
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK------ 224
Query: 135 TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKIACSNEK 192
WMAPE L + +D+WS G ++ E+ T G P G + L K+ +
Sbjct: 225 ---WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE----LFKLLKEGHR 277
Query: 193 PHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
P ++ + C P +R + ++L+
Sbjct: 278 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 20/153 (13%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK-----NNGNLKQSWQSIGG 134
E L +H DL NVL+ + +K+ D G AR +N++ NG L
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK------ 224
Query: 135 TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKIACSNEK 192
WMAPE L + +D+WS G ++ E+ T G P G + L K+ +
Sbjct: 225 ---WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE----LFKLLKEGHR 277
Query: 193 PHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
P ++ + C P +R + ++L+
Sbjct: 278 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 20/153 (13%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK-----NNGNLKQSWQSIGG 134
E L +H DL NVL+ + +K+ D G AR +N++ NG L
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK------ 224
Query: 135 TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKIACSNEK 192
WMAPE L + +D+WS G ++ E+ T G P G + L K+ +
Sbjct: 225 ---WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE----LFKLLKEGHR 277
Query: 193 PHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
P ++ + C P +R + ++L+
Sbjct: 278 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 20/153 (13%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK-----NNGNLKQSWQSIGG 134
E L +H DL NVL+ + +K+ D G AR +N++ NG L
Sbjct: 160 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK------ 213
Query: 135 TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKIACSNEK 192
WMAPE L + +D+WS G ++ E+ T G P G + L K+ +
Sbjct: 214 ---WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE----LFKLLKEGHR 266
Query: 193 PHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
P ++ + C P +R + ++L+
Sbjct: 267 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 299
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG 66
++ A S + + +EA + S+++P++ R TV + + M G LLD +
Sbjct: 54 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK 113
Query: 67 GTLDAGVIRLYTKEILHG------NGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
+ + + + +I G ++H DL NVL+ + VK+ D G A+ +
Sbjct: 114 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL---- 169
Query: 121 NNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
G ++ + + GG WMA E + + +D+WS G V E+ T G P+ +
Sbjct: 170 --GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 227
Query: 178 NAAATLLK 185
+ +++L+
Sbjct: 228 SEISSILE 235
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 20/153 (13%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK-----NNGNLKQSWQSIGG 134
E L +H DL NVL+ + +K+ D G AR +N++ NG L
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK------ 224
Query: 135 TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKIACSNEK 192
WMAPE L + +D+WS G ++ E+ T G P G + L K+ +
Sbjct: 225 ---WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE----LFKLLKEGHR 277
Query: 193 PHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
P ++ + C P +R + ++L+
Sbjct: 278 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 19/188 (10%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG 66
++ A S + + +EA + S+++P++ R TV + + M G LLD +
Sbjct: 52 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK 111
Query: 67 GTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
+ + + + +I G L H DL NVL+ + VK+ D G A+ +
Sbjct: 112 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL---- 167
Query: 121 NNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
G ++ + + GG WMA E + + +D+WS G V E+ T G P+ +
Sbjct: 168 --GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 225
Query: 178 NAAATLLK 185
+ +++L+
Sbjct: 226 SEISSILE 233
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 20/153 (13%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK-----NNGNLKQSWQSIGG 134
E L +H DL NVL+ + +K+ D G AR +N++ NG L
Sbjct: 163 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK------ 216
Query: 135 TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKIACSNEK 192
WMAPE L + +D+WS G ++ E+ T G P G + L K+ +
Sbjct: 217 ---WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE----LFKLLKEGHR 269
Query: 193 PHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
P ++ + C P +R + ++L+
Sbjct: 270 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 302
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 33/185 (17%)
Query: 24 RNEAEIR--QSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRL 76
R E EI + L P+I + + + + +EY AG L D + + R
Sbjct: 54 RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRF 112
Query: 77 YTK-----EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQS 131
+ + E H + I+H DLK N+LL H +VK+ D G ++++ +GN ++
Sbjct: 113 FQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFG----LSNIMTDGNF---LKT 165
Query: 132 IGGTQLWMAPEVLRNEGLDFA---TDIWSLGCMVIEMATGRPPWGDK--------ISNAA 180
G+ + APEV+ G +A D+WS G ++ M R P+ D+ ISN
Sbjct: 166 SCGSPNYAAPEVI--SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV 223
Query: 181 ATLLK 185
TL K
Sbjct: 224 YTLPK 228
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 20/153 (13%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK-----NNGNLKQSWQSIGG 134
E L +H DL NVL+ + +K+ D G AR +N++ NG L
Sbjct: 158 EYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK------ 211
Query: 135 TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKIACSNEK 192
WMAPE L + +D+WS G ++ E+ T G P G + L K+ +
Sbjct: 212 ---WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE----LFKLLKEGHR 264
Query: 193 PHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
P ++ + C P +R + ++L+
Sbjct: 265 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 297
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 20/153 (13%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK-----NNGNLKQSWQSIGG 134
E L +H DL NVL+ + +K+ D G AR +N++ NG L
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVK------ 224
Query: 135 TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKIACSNEK 192
WMAPE L + +D+WS G ++ E+ T G P G + L K+ +
Sbjct: 225 ---WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE----LFKLLKEGHR 277
Query: 193 PHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
P ++ + C P +R + ++L+
Sbjct: 278 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 27/172 (15%)
Query: 20 VQALRNEAEIRQSLNSPN------IGRNGEKTVNIFMEYMAGGSLLDVAEK--------- 64
V+A E + + LN PN I E ++ + YM G LL
Sbjct: 66 VEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKD 125
Query: 65 ---FGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN 121
FG + G+ E L +H DL N +L VK+ D G AR + D +
Sbjct: 126 LISFGLQVARGM------EYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILD-RE 178
Query: 122 NGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPW 172
+++Q + + W A E L+ +D+WS G ++ E+ T G PP+
Sbjct: 179 YYSVQQHRHARLPVK-WTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPY 229
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 20/153 (13%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK-----NNGNLKQSWQSIGG 134
E L +H DL NVL+ + +K+ D G AR +N++ NG L
Sbjct: 217 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK------ 270
Query: 135 TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKIACSNEK 192
WMAPE L + +D+WS G ++ E+ T G P G + L K+ +
Sbjct: 271 ---WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE----LFKLLKEGHR 323
Query: 193 PHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
P ++ + C P +R + ++L+
Sbjct: 324 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 356
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 20/153 (13%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK-----NNGNLKQSWQSIGG 134
E L +H DL NVL+ + +K+ D G AR +N++ NG L
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVK------ 224
Query: 135 TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKIACSNEK 192
WMAPE L + +D+WS G ++ E+ T G P G + L K+ +
Sbjct: 225 ---WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE----LFKLLKEGHR 277
Query: 193 PHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
P ++ + C P +R + ++L+
Sbjct: 278 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 11 VKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG 66
++ A S + + +EA + S+++P++ R TV + + M G LLD +
Sbjct: 59 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK 118
Query: 67 GTLDAGVIRLYTKEILHG------NGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK 120
+ + + + +I G ++H DL NVL+ + VK+ D G A+ +
Sbjct: 119 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL---- 174
Query: 121 NNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKIS 177
G ++ + + GG WMA E + + +D+WS G V E+ T G P+ +
Sbjct: 175 --GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 232
Query: 178 NAAATLLK 185
+ +++L+
Sbjct: 233 SEISSILE 240
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 20/160 (12%)
Query: 25 NEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKE 80
+EA I S++ P++ R T+ + + M G LL+ + + + ++ + +
Sbjct: 66 DEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ 125
Query: 81 ILHG------NGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGG 134
I G ++H DL NVL+ S VK+ D G AR + G+ K+ + + GG
Sbjct: 126 IAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLL-----EGDEKE-YNADGG 179
Query: 135 TQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT--GRP 170
WMA E + +D+WS G + E+ T G+P
Sbjct: 180 KMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 219
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 22/162 (13%)
Query: 83 HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
H G+LH D+K N+L+ + G++KL D G + D + GT+++ P
Sbjct: 127 HNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------TVYTDFDGTRVYSPP 178
Query: 142 EVLRNEGLD-FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQF 199
E +R + +WSLG ++ +M G P+ D+ + S E H
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQH----- 233
Query: 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+ CL +P R + EE+ NH ++ T E
Sbjct: 234 ------LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 269
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 83 HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
H G+LH D+K N+L+ + G++KL D G + D + GT+++ P
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------TVYTDFDGTRVYSPP 178
Query: 142 EVLRNEGLD-FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQF 199
E +R + +WSLG ++ +M G P+ D+ + S+E H
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQH----- 233
Query: 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+ CL +P R + EE+ NH ++ T E
Sbjct: 234 ------LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 269
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 37/201 (18%)
Query: 2 NKGTGALFVVKSAESEAGVQAL---RNEAEIRQSLNSPNIGR----NGEKTVN---IFME 51
+K TG LF +K + + ++ + E E+ + LN NI + E T + ME
Sbjct: 30 HKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89
Query: 52 YMAGGSLLDVAEKFGGT--LDAGVIRLYTKEILHG------NGILHCDLKCNNVL--LGS 101
+ GSL V E+ L + ++++ G NGI+H ++K N++ +G
Sbjct: 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGE 149
Query: 102 HGD--VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPE-----VLRNEG---LDF 151
G KL D G AR + D + + S+ GT+ ++ P+ VLR +
Sbjct: 150 DGQSVYKLTDFGAARELED-------DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGA 202
Query: 152 ATDIWSLGCMVIEMATGRPPW 172
D+WS+G ATG P+
Sbjct: 203 TVDLWSIGVTFYHAATGSLPF 223
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 83 HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
H G+LH D+K N+L+ + G++KL D G + D + GT+++ P
Sbjct: 130 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------TVYTDFDGTRVYSPP 181
Query: 142 EVLRNEGLD-FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQF 199
E +R + +WSLG ++ +M G P+ D+ + S+E H
Sbjct: 182 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH----- 236
Query: 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+ CL +P R + EE+ NH ++ T E
Sbjct: 237 ------LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 272
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 83 HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
H G+LH D+K N+L+ + G++KL D G + D + GT+++ P
Sbjct: 131 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------TVYTDFDGTRVYSPP 182
Query: 142 EVLRNEGLD-FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQF 199
E +R + +WSLG ++ +M G P+ D+ + S+E H
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH----- 237
Query: 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+ CL +P R + EE+ NH ++ T E
Sbjct: 238 ------LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 273
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 83 HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
H G+LH D+K N+L+ + G++KL D G + D + GT+++ P
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------TVYTDFDGTRVYSPP 183
Query: 142 EVLRNEGLD-FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQF 199
E +R + +WSLG ++ +M G P+ D+ + S+E H
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH----- 238
Query: 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+ CL +P R + EE+ NH ++ T E
Sbjct: 239 ------LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 274
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 83 HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
H G+LH D+K N+L+ + G++KL D G + D + GT+++ P
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------TVYTDFDGTRVYSPP 210
Query: 142 EVLRNEGLD-FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQF 199
E +R + +WSLG ++ +M G P+ D+ + S+E H
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQH----- 265
Query: 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+ CL +P R + EE+ NH ++ T E
Sbjct: 266 ------LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 301
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 83 HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
H G+LH D+K N+L+ + G++KL D G + D + GT+++ P
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------TVYTDFDGTRVYSPP 178
Query: 142 EVLRNEGLD-FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQF 199
E +R + +WSLG ++ +M G P+ D+ + S+E H
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH----- 233
Query: 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+ CL +P R + EE+ NH ++ T E
Sbjct: 234 ------LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 269
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 20/153 (13%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK-----NNGNLKQSWQSIGG 134
E L +H DL NVL+ + +++ D G AR +N++ NG L W
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKW----- 225
Query: 135 TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKIACSNEK 192
MAPE L + +D+WS G ++ E+ T G P G + L K+ +
Sbjct: 226 ----MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE----LFKLLKEGHR 277
Query: 193 PHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
P ++ + C P +R + ++L+
Sbjct: 278 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 83 HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
H G+LH D+K N+L+ + G++KL D G + D + GT+++ P
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------TVYTDFDGTRVYSPP 210
Query: 142 EVLRNEGLD-FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQF 199
E +R + +WSLG ++ +M G P+ D+ + S+E H
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQH----- 265
Query: 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+ CL +P R + EE+ NH ++ T E
Sbjct: 266 ------LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 301
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 83 HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
H G+LH D+K N+L+ + G++KL D G + D + GT+++ P
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------TVYTDFDGTRVYSPP 183
Query: 142 EVLRNEGLD-FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQF 199
E +R + +WSLG ++ +M G P+ D+ + S+E H
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH----- 238
Query: 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+ CL +P R + EE+ NH ++ T E
Sbjct: 239 ------LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 274
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 93/234 (39%), Gaps = 22/234 (9%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVA 62
A+ V++ S + + +EA + + SP + R TV + + M G LLD
Sbjct: 50 AIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQLVTQLMPYGCLLDHV 109
Query: 63 EKFGGTLDAGVIRLYTKEILHGNGIL------HCDLKCNNVLLGSHGDVKLPDLGCARRV 116
+ G L + + + +I G L H DL NVL+ S VK+ D G AR +
Sbjct: 110 RENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLL 169
Query: 117 NDLKNNGNLKQSWQSIGGTQL--WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWG 173
D+ + + GG WMA E + +D+WS G V E+ T G P+
Sbjct: 170 -DIDET-----EYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
Query: 174 DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227
+ LL+ E+ P V + KC E R EL++
Sbjct: 224 GIPAREIPDLLE---KGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVSE 274
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 83 HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
H G+LH D+K N+L+ + G++KL D G + D + GT+++ P
Sbjct: 131 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------TVYTDFDGTRVYSPP 182
Query: 142 EVLRNEGLD-FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQF 199
E +R + +WSLG ++ +M G P+ D+ + S+E H
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH----- 237
Query: 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+ CL +P R + EE+ NH ++ T E
Sbjct: 238 ------LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 273
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 13/146 (8%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG------ 133
E LH G++H DLK +N+ VK+ D G ++ + + +
Sbjct: 132 EFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQV 191
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193
GT+L+M+PE + DI+SLG ++ E+ P+ ++ TL + P
Sbjct: 192 GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER-VRTLTDVRNLKFPP 247
Query: 194 HFPTQF---FKKVLDFLAKCLERKPE 216
F ++ + V D L+ +PE
Sbjct: 248 LFTQKYPCEYVMVQDMLSPSPMERPE 273
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 83 HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
H G+LH D+K N+L+ + G++KL D G + D + GT+++ P
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------TVYTDFDGTRVYSPP 211
Query: 142 EVLRNEGLD-FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQF 199
E +R + +WSLG ++ +M G P+ D+ + S+E H
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQH----- 266
Query: 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+ CL +P R + EE+ NH ++ T E
Sbjct: 267 ------LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 302
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 16/158 (10%)
Query: 25 NEAEIRQSLNSPNI----GRNGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKE 80
+EA I S++ P++ G T+ + + M G LL+ + + + ++ + +
Sbjct: 89 DEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ 148
Query: 81 ILHG------NGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGG 134
I G ++H DL NVL+ S VK+ D G AR + + N I
Sbjct: 149 IAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK- 207
Query: 135 TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT--GRP 170
WMA E + +D+WS G + E+ T G+P
Sbjct: 208 ---WMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 242
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 19/183 (10%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNI----GRNGEKT-VNIFMEYMAGGSLLDV 61
A+ +KS +E + +EA I + PN+ G + T V I E+M GSL
Sbjct: 39 AIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSF 98
Query: 62 AEKFGGTLDA----GVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115
+ G G++R + L +H L N+L+ S+ K+ D G +R
Sbjct: 99 LRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRF 158
Query: 116 VNDLKNNGNLKQSWQSIGGTQL---WMAPEVLRNEGLDFATDIWSLGCMVIE-MATGRPP 171
+ D ++ ++ S G ++ W APE ++ A+D+WS G ++ E M+ G P
Sbjct: 159 LEDDTSD----PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 214
Query: 172 WGD 174
+ D
Sbjct: 215 YWD 217
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 83 HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
H G+LH D+K N+L+ + G++KL D G + D + GT+++ P
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------TVYTDFDGTRVYSPP 183
Query: 142 EVLRNEGLD-FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQF 199
E +R + +WSLG ++ +M G P+ D+ + S+E H
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH----- 238
Query: 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+ CL +P R + EE+ NH ++ T E
Sbjct: 239 ------LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 274
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 83 HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
H G+LH D+K N+L+ + G++KL D G + D + GT+++ P
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------TVYTDFDGTRVYSPP 211
Query: 142 EVLRNEGLD-FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQF 199
E +R + +WSLG ++ +M G P+ D+ + S+E H
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQH----- 266
Query: 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+ CL +P R + EE+ NH ++ T E
Sbjct: 267 ------LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 302
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 83 HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
H G+LH D+K N+L+ + G++KL D G + D + GT+++ P
Sbjct: 174 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------TVYTDFDGTRVYSPP 225
Query: 142 EVLRNEGLD-FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQF 199
E +R + +WSLG ++ +M G P+ D+ + S+E H
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH----- 280
Query: 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+ CL +P R + EE+ NH ++ T E
Sbjct: 281 ------LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 316
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 17/151 (11%)
Query: 87 ILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNG------NLKQSWQSIGGTQLWMA 140
I+H DLK N+LL + G +KL D G A ++ + L + + T ++
Sbjct: 159 IIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRT 218
Query: 141 PEVL---RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPT 197
PE++ N + DIW+LGC++ + + P+ D A L + P T
Sbjct: 219 PEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED-----GAKLRIVNGKYSIPPHDT 273
Query: 198 QFFKKVLDFLAKC-LERKPEKRWSAEELLNH 227
Q+ V L + L+ PE+R S E+++
Sbjct: 274 QY--TVFHSLIRAMLQVNPEERLSIAEVVHQ 302
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 89/227 (39%), Gaps = 24/227 (10%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDV 61
A+ +K +E + +EA I PNI R V I E+M G+L
Sbjct: 46 AIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSF 105
Query: 62 AE----KFGGTLDAGVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115
+F G++R L +H DL N+L+ S+ K+ D G +R
Sbjct: 106 LRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRF 165
Query: 116 VNDLKNNGNLKQSWQSIGG--TQLWMAPEVLRNEGLDFATDIWSLGCMVIE-MATGRPPW 172
L+ N + S+GG W APE + A+D WS G ++ E M+ G P+
Sbjct: 166 ---LEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPY 222
Query: 173 GD----KISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKP 215
D + NA ++ P PT + +LD K +P
Sbjct: 223 WDMSNQDVINAIEQDYRLP---PPPDCPTSLHQLMLDCWQKDRNARP 266
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 83 HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
H G+LH D+K N+L+ + G++KL D G + D + GT+++ P
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------TVYTDFDGTRVYSPP 210
Query: 142 EVLRNEGLD-FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQF 199
E +R + +WSLG ++ +M G P+ D+ + S+E H
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH----- 265
Query: 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+ CL +P R + EE+ NH ++ T E
Sbjct: 266 ------LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 301
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 89/227 (39%), Gaps = 24/227 (10%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDV 61
A+ +K +E + +EA I PNI R V I E+M G+L
Sbjct: 48 AIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSF 107
Query: 62 AE----KFGGTLDAGVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115
+F G++R L +H DL N+L+ S+ K+ D G +R
Sbjct: 108 LRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRF 167
Query: 116 VNDLKNNGNLKQSWQSIGG--TQLWMAPEVLRNEGLDFATDIWSLGCMVIE-MATGRPPW 172
L+ N + S+GG W APE + A+D WS G ++ E M+ G P+
Sbjct: 168 ---LEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPY 224
Query: 173 GD----KISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKP 215
D + NA ++ P PT + +LD K +P
Sbjct: 225 WDMSNQDVINAIEQDYRLP---PPPDCPTSLHQLMLDCWQKDRNARP 268
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 83 HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
H G+LH D+K N+L+ + G++KL D G + D + GT+++ P
Sbjct: 146 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------TVYTDFDGTRVYSPP 197
Query: 142 EVLRNEGLD-FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQF 199
E +R + +WSLG ++ +M G P+ D+ + S+E H
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH----- 252
Query: 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+ CL +P R + EE+ NH ++ T E
Sbjct: 253 ------LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 288
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 83 HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
H G+LH D+K N+L+ + G++KL D G + D + GT+++ P
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------TVYTDFDGTRVYSPP 198
Query: 142 EVLRNEGLD-FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQF 199
E +R + +WSLG ++ +M G P+ D+ + S+E H
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH----- 253
Query: 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+ CL +P R + EE+ NH ++ T E
Sbjct: 254 ------LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 289
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 83 HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
H G+LH D+K N+L+ + G++KL D G + D + GT+++ P
Sbjct: 174 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------TVYTDFDGTRVYSPP 225
Query: 142 EVLRNEGLD-FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQF 199
E +R + +WSLG ++ +M G P+ D+ + S+E H
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH----- 280
Query: 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+ CL +P R + EE+ NH ++ T E
Sbjct: 281 ------LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 316
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 83 HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
H G+LH D+K N+L+ + G++KL D G + D + GT+++ P
Sbjct: 166 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------TVYTDFDGTRVYSPP 217
Query: 142 EVLRNEGLD-FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQF 199
E +R + +WSLG ++ +M G P+ D+ + S+E H
Sbjct: 218 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH----- 272
Query: 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+ CL +P R + EE+ NH ++ T E
Sbjct: 273 ------LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 308
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 22/162 (13%)
Query: 83 HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
H G+LH D+K N+L+ + G++KL D G + D + GT+++ P
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------TVYTDFDGTRVYSPP 211
Query: 142 EVLRNEGLD-FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQF 199
E +R + +WSLG ++ +M G P+ D+ + S E H
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQH----- 266
Query: 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+ CL +P R + EE+ NH ++ T E
Sbjct: 267 ------LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 302
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 22/162 (13%)
Query: 83 HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
H G+LH D+K N+L+ + G++KL D G + D + GT+++ P
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------TVYTDFDGTRVYSPP 211
Query: 142 EVLRNEGLD-FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQF 199
E +R + +WSLG ++ +M G P+ D+ + S E H
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQH----- 266
Query: 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+ CL +P R + EE+ NH ++ T E
Sbjct: 267 ------LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 302
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 22/162 (13%)
Query: 83 HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
H G+LH D+K N+L+ + G++KL D G + D + GT+++ P
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------TVYTDFDGTRVYSPP 210
Query: 142 EVLRNEGLD-FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQF 199
E +R + +WSLG ++ +M G P+ D+ + S E H
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQH----- 265
Query: 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+ CL +P R + EE+ NH ++ T E
Sbjct: 266 ------LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 301
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 22/162 (13%)
Query: 83 HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
H G+LH D+K N+L+ + G++KL D G + D + GT+++ P
Sbjct: 154 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------TVYTDFDGTRVYSPP 205
Query: 142 EVLRNEGLD-FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQF 199
E +R + +WSLG ++ +M G P+ D+ + S E H
Sbjct: 206 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQH----- 260
Query: 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+ CL +P R + EE+ NH ++ T E
Sbjct: 261 ------LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 296
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 101/247 (40%), Gaps = 46/247 (18%)
Query: 15 ESEAGVQALRNEAEIRQSLNSPNIGRNGEKTVNIFMEYMAGGSLLD----------VAEK 64
E+E L I + S RN + + Y GSL D +A +
Sbjct: 50 ETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALR 109
Query: 65 FGGTLDAGVIRLYTKEILHGNG---ILHCDLKCNNVLLGSHGDVKLPDLGCA---RRVND 118
+ G+ L+ EI G I H D K NVL+ S+ + DLG A + +D
Sbjct: 110 LAVSAACGLAHLHV-EIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSD 168
Query: 119 LKNNGNLKQSWQSIGGTQLWMAPEVL----RNEGLDFA--TDIWSLGCMVIEMATG---- 168
+ GN + GT+ +MAPEVL R + + TDIW+ G ++ E+A
Sbjct: 169 YLDIGNNPRV-----GTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVN 223
Query: 169 ------RPPWGDKISNAAA--TLLKIACSNEK-PHFPTQF-FKKVLDFLAK----CLERK 214
RPP+ D + N + + K+ C +++ P P + VL LA+ C
Sbjct: 224 GIVEDYRPPFYDVVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPN 283
Query: 215 PEKRWSA 221
P R +A
Sbjct: 284 PSARLTA 290
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 22/162 (13%)
Query: 83 HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
H G+LH D+K N+L+ + G++KL D G + D + GT+++ P
Sbjct: 174 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------TVYTDFDGTRVYSPP 225
Query: 142 EVLRNEGLD-FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQF 199
E +R + +WSLG ++ +M G P+ D+ + S E H
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQH----- 280
Query: 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+ CL +P R + EE+ NH ++ T E
Sbjct: 281 ------LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 316
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 22/162 (13%)
Query: 83 HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
H G+LH D+K N+L+ + G++KL D G + D + GT+++ P
Sbjct: 179 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------TVYTDFDGTRVYSPP 230
Query: 142 EVLRNEGLD-FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQF 199
E +R + +WSLG ++ +M G P+ D+ + S E H
Sbjct: 231 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQH----- 285
Query: 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+ CL +P R + EE+ NH ++ T E
Sbjct: 286 ------LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 321
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 13/137 (9%)
Query: 45 TVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHG------NGILHCDLKCNNVL 98
++ + +Y+ GSLLD + G L ++ + +I G +G++H +L NVL
Sbjct: 106 SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVL 165
Query: 99 LGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL-WMAPEVLRNEGLDFATDIWS 157
L S V++ D G A DL + KQ S T + WMA E + +D+WS
Sbjct: 166 LKSPSQVQVADFGVA----DLLPPDD-KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWS 220
Query: 158 LGCMVIEMAT-GRPPWG 173
G V E+ T G P+
Sbjct: 221 YGVTVWELMTFGAEPYA 237
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 22/162 (13%)
Query: 83 HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
H G+LH D+K N+L+ + G++KL D G + D + GT+++ P
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------TVYTDFDGTRVYSPP 198
Query: 142 EVLRNEGLD-FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQF 199
E +R + +WSLG ++ +M G P+ D+ + S E H
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQH----- 253
Query: 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+ CL +P R + EE+ NH ++ T E
Sbjct: 254 ------LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 289
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 22/162 (13%)
Query: 83 HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
H G+LH D+K N+L+ + G++KL D G + D + GT+++ P
Sbjct: 146 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------TVYTDFDGTRVYSPP 197
Query: 142 EVLRNEGLD-FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQF 199
E +R + +WSLG ++ +M G P+ D+ + S E H
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQH----- 252
Query: 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+ CL +P R + EE+ NH ++ T E
Sbjct: 253 ------LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 288
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 20/181 (11%)
Query: 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDV 61
A+ +K+ +E EA I + NI R + K + I EYM G+L
Sbjct: 77 AIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKF 136
Query: 62 AEKFGGTLDA----GVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115
+ G G++R + L +H DL N+L+ S+ K+ D G +R
Sbjct: 137 LREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRV 196
Query: 116 VNDLKNNGNLKQSWQSIGG--TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATG--RPP 171
+ D + + ++ + GG W APE + A+D+WS G ++ E+ T RP
Sbjct: 197 LED-----DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPY 251
Query: 172 W 172
W
Sbjct: 252 W 252
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 87/229 (37%), Gaps = 42/229 (18%)
Query: 21 QALRNEAEIRQSLNSPNIG-----RNGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAG--- 72
+ R+EA +R L PN+ ++ +++ Y + G L + D G
Sbjct: 74 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 133
Query: 73 -------------VIRLYTK-----EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCAR 114
+ L + E L + ++H DL NVL+ +VK+ DLG R
Sbjct: 134 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFR 193
Query: 115 RVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPWG 173
V L S I WMAPE + +DIWS G ++ E+ + G P+
Sbjct: 194 EVYAADYYKLLGNSLLPIR----WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC 249
Query: 174 DKISNAAATLLK----IACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
+ +++ + C ++ P + V + +C P +R
Sbjct: 250 GYSNQDVVEMIRNRQVLPCPDDCPAW-------VYALMIECWNEFPSRR 291
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 13/137 (9%)
Query: 45 TVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHG------NGILHCDLKCNNVL 98
++ + +Y+ GSLLD + G L ++ + +I G +G++H +L NVL
Sbjct: 88 SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVL 147
Query: 99 LGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL-WMAPEVLRNEGLDFATDIWS 157
L S V++ D G A DL + KQ S T + WMA E + +D+WS
Sbjct: 148 LKSPSQVQVADFGVA----DLLPPDD-KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWS 202
Query: 158 LGCMVIEMAT-GRPPWG 173
G V E+ T G P+
Sbjct: 203 YGVTVWELMTFGAEPYA 219
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 97/247 (39%), Gaps = 63/247 (25%)
Query: 39 GRNGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI----------LHGN-GI 87
G NG V +F + G +LL + +K+ G+ +Y K+I +H GI
Sbjct: 99 GPNGVHVVMVFE--VLGENLLALIKKYEHR---GIPLIYVKQISKQLLLGLDYMHRRCGI 153
Query: 88 LHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNE 147
+H D+K NVL+ V P+ ++ DL N + + + T+ + +PEVL
Sbjct: 154 IHTDIKPENVLMEI---VDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGA 210
Query: 148 GLDFATDIWSLGCMVIEMATG----RPPWG-------DKIS------------------- 177
DIWS C++ E+ TG P G D I+
Sbjct: 211 PWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKY 270
Query: 178 -----NAAATLLKIA---------CSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEE 223
N+ L I+ EK F K++ DFL+ L+ P KR A
Sbjct: 271 TRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG 330
Query: 224 LLNHTFI 230
L+NH ++
Sbjct: 331 LVNHPWL 337
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 97/247 (39%), Gaps = 63/247 (25%)
Query: 39 GRNGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI----------LHGN-GI 87
G NG V +F + G +LL + +K+ G+ +Y K+I +H GI
Sbjct: 99 GPNGVHVVMVFE--VLGENLLALIKKYEHR---GIPLIYVKQISKQLLLGLDYMHRRCGI 153
Query: 88 LHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNE 147
+H D+K NVL+ V P+ ++ DL N + + + T+ + +PEVL
Sbjct: 154 IHTDIKPENVLMEI---VDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGA 210
Query: 148 GLDFATDIWSLGCMVIEMATG----RPPWG-------DKIS------------------- 177
DIWS C++ E+ TG P G D I+
Sbjct: 211 PWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKY 270
Query: 178 -----NAAATLLKIA---------CSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEE 223
N+ L I+ EK F K++ DFL+ L+ P KR A
Sbjct: 271 TRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG 330
Query: 224 LLNHTFI 230
L+NH ++
Sbjct: 331 LVNHPWL 337
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 22/162 (13%)
Query: 83 HGNGILHCDLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141
H G+LH D+K N+L+ + G++KL D G + D + GT+++ P
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------TVYTDFDGTRVYSPP 198
Query: 142 EVLRNEGLD-FATDIWSLGCMVIEMATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQF 199
E +R + +WSLG ++ +M G P+ D+ + S E H
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQH----- 253
Query: 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241
+ CL +P R + EE+ NH ++ T E
Sbjct: 254 ------LIRWCLALRPXDRPTFEEIQNHPWMQDVLLPQETAE 289
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 87/229 (37%), Gaps = 42/229 (18%)
Query: 21 QALRNEAEIRQSLNSPNIG-----RNGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAG--- 72
+ R+EA +R L PN+ ++ +++ Y + G L + D G
Sbjct: 57 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 116
Query: 73 -------------VIRLYTK-----EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCAR 114
+ L + E L + ++H DL NVL+ +VK+ DLG R
Sbjct: 117 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFR 176
Query: 115 RVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPWG 173
V L S I WMAPE + +DIWS G ++ E+ + G P+
Sbjct: 177 EVYAADYYKLLGNSLLPIR----WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC 232
Query: 174 DKISNAAATLLK----IACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
+ +++ + C ++ P + V + +C P +R
Sbjct: 233 GYSNQDVVEMIRNRQVLPCPDDCPAW-------VYALMIECWNEFPSRR 274
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 19/137 (13%)
Query: 44 KTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNV 97
KT ++ EY+ + TL IR Y E+L H GI+H D+K +NV
Sbjct: 101 KTPSLIFEYVNNTDF----KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNV 156
Query: 98 LLGSH-GDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDI 155
++ ++L D G A + + G + + ++ + PE+L + + D++ D+
Sbjct: 157 MIDHELRKLRLIDWGLA----EFYHPG---KEYNVRVASRYFKGPELLVDLQDYDYSLDM 209
Query: 156 WSLGCMVIEMATGRPPW 172
WSLGCM M + P+
Sbjct: 210 WSLGCMFAGMIFRKEPF 226
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 62/162 (38%), Gaps = 20/162 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYT- 78
EA I + + PNI R ++ + I ME + GG L G L +
Sbjct: 161 QEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVG 220
Query: 79 -----KEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVND--LKNNGNLKQSWQS 131
E L +H DL N L+ +K+ D G +R D +G L+Q
Sbjct: 221 DAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQV--- 277
Query: 132 IGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIE-MATGRPPW 172
W APE L +D+WS G ++ E + G P+
Sbjct: 278 ---PVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPY 316
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 19/137 (13%)
Query: 44 KTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNV 97
KT ++ EY+ + TL IR Y E+L H GI+H D+K +NV
Sbjct: 102 KTPSLIFEYVNNTDF----KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNV 157
Query: 98 LLGSH-GDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDI 155
++ ++L D G A + + G + + ++ + PE+L + + D++ D+
Sbjct: 158 MIDHELRKLRLIDWGLA----EFYHPG---KEYNVRVASRYFKGPELLVDLQDYDYSLDM 210
Query: 156 WSLGCMVIEMATGRPPW 172
WSLGCM M + P+
Sbjct: 211 WSLGCMFAGMIFRKEPF 227
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 45/196 (22%)
Query: 73 VIRLYTKEILHGNGILHC--------DLKCNNVLLG-SHGDVKLPDLGCARRVNDLKNNG 123
+I+++ +++ G LH D+K +NVL+ + G +KL D G A++++ + N
Sbjct: 130 LIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNV 189
Query: 124 NLKQSWQSIGGTQLWMAPE-VLRNEGLDFATDIWSLGCMVIEMATGRPPW-GDKISNAAA 181
+ ++ + APE + N+ A DIWS+GC+ EM G P + GD +
Sbjct: 190 -------AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLH 242
Query: 182 TLLKI-ACSNEK-------PHFPTQFF-------------------KKVLDFLAKCLERK 214
++++ C + + H + K+ D L+ L+
Sbjct: 243 EIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYL 302
Query: 215 PEKRWSAEELLNHTFI 230
PE+R E L H +
Sbjct: 303 PEERMKPYEALCHPYF 318
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 19/137 (13%)
Query: 44 KTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNV 97
KT ++ EY+ + TL IR Y E+L H GI+H D+K +NV
Sbjct: 101 KTPSLIFEYVNNTDF----KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNV 156
Query: 98 LLGSH-GDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDI 155
++ ++L D G A + + G + + ++ + PE+L + + D++ D+
Sbjct: 157 MIDHELRKLRLIDWGLA----EFYHPG---KEYNVRVASRYFKGPELLVDLQDYDYSLDM 209
Query: 156 WSLGCMVIEMATGRPPW 172
WSLGCM M + P+
Sbjct: 210 WSLGCMFAGMIFRKEPF 226
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 19/137 (13%)
Query: 44 KTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNV 97
KT ++ EY+ + TL IR Y E+L H GI+H D+K +NV
Sbjct: 101 KTPSLIFEYVNNTDF----KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNV 156
Query: 98 LLGSH-GDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDI 155
++ ++L D G A + + G + + ++ + PE+L + + D++ D+
Sbjct: 157 MIDHELRKLRLIDWGLA----EFYHPG---KEYNVRVASRYFKGPELLVDLQDYDYSLDM 209
Query: 156 WSLGCMVIEMATGRPPW 172
WSLGCM M + P+
Sbjct: 210 WSLGCMFAGMIFRKEPF 226
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 19/137 (13%)
Query: 44 KTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNV 97
KT ++ EY+ + TL IR Y E+L H GI+H D+K +NV
Sbjct: 102 KTPSLIFEYVNNTDF----KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNV 157
Query: 98 LLGSH-GDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDI 155
++ ++L D G A + + G + + ++ + PE+L + + D++ D+
Sbjct: 158 MIDHELRKLRLIDWGLA----EFYHPG---KEYNVRVASRYFKGPELLVDLQDYDYSLDM 210
Query: 156 WSLGCMVIEMATGRPPW 172
WSLGCM M + P+
Sbjct: 211 WSLGCMFAGMIFRKEPF 227
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 19/137 (13%)
Query: 44 KTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNV 97
KT ++ EY+ + TL IR Y E+L H GI+H D+K +NV
Sbjct: 103 KTPSLIFEYVNNTDF----KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNV 158
Query: 98 LLGSH-GDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDI 155
++ ++L D G A + + G + + ++ + PE+L + + D++ D+
Sbjct: 159 MIDHELRKLRLIDWGLA----EFYHPG---KEYNVRVASRYFKGPELLVDLQDYDYSLDM 211
Query: 156 WSLGCMVIEMATGRPPW 172
WSLGCM M + P+
Sbjct: 212 WSLGCMFAGMIFRKEPF 228
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG------ 133
E LH G++H DLK +N+ VK+ D G ++ + + +
Sbjct: 178 EFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQV 237
Query: 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165
GT+L+M+PE + DI+SLG ++ E+
Sbjct: 238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 20/153 (13%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK-----NNGNLKQSWQSIGG 134
E L +H DL NVL+ +K+ D G AR ++ + NG L W
Sbjct: 205 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKW----- 259
Query: 135 TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKIACSNEK 192
MAPE L + +D+WS G ++ E+ T G P G + L K+ +
Sbjct: 260 ----MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----LFKLLKEGHR 311
Query: 193 PHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
P+ ++ + C P +R + ++L+
Sbjct: 312 MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 344
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 19/137 (13%)
Query: 44 KTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNV 97
KT ++ EY+ + TL IR Y E+L H GI+H D+K +NV
Sbjct: 101 KTPSLIFEYVNNTDF----KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNV 156
Query: 98 LLGSH-GDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDI 155
++ ++L D G A + + G + + ++ + PE+L + + D++ D+
Sbjct: 157 MIDHELRKLRLIDWGLA----EFYHPG---KEYNVRVASRYFKGPELLVDLQDYDYSLDM 209
Query: 156 WSLGCMVIEMATGRPPW 172
WSLGCM M + P+
Sbjct: 210 WSLGCMFAGMIFRKEPF 226
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 94/215 (43%), Gaps = 32/215 (14%)
Query: 46 VNIFMEYMAGGSLL---------DVAEKFGGTLDAGVIRLYTKEILHGNGIL------HC 90
V + EY G LL D+ ++ G L+ + ++ ++ G L H
Sbjct: 125 VLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHR 184
Query: 91 DLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL---WMAPEVLRNE 147
D+ NVLL + K+ D G AR D+ N+ N + G +L WMAPE + +
Sbjct: 185 DVAARNVLLTNGHVAKIGDFGLAR---DIMNDSN----YIVKGNARLPVKWMAPESIFDC 237
Query: 148 GLDFATDIWSLGCMVIEM-ATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQFFKKVLD 205
+D+WS G ++ E+ + G P+ G +++ L+K +P F K +
Sbjct: 238 VYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAP---KNIYS 294
Query: 206 FLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTE 240
+ C +P R + +++ +F+ A+++ E
Sbjct: 295 IMQACWALEPTHRPTFQQIC--SFLQEQAQEDRRE 327
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 62/162 (38%), Gaps = 20/162 (12%)
Query: 25 NEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYT- 78
EA I + + PNI R ++ + I ME + GG L G L +
Sbjct: 161 QEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVG 220
Query: 79 -----KEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVND--LKNNGNLKQSWQS 131
E L +H DL N L+ +K+ D G +R D +G L+Q
Sbjct: 221 DAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQV--- 277
Query: 132 IGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIE-MATGRPPW 172
W APE L +D+WS G ++ E + G P+
Sbjct: 278 ---PVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPY 316
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 19/137 (13%)
Query: 44 KTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNV 97
KT ++ EY+ + TL IR Y E+L H GI+H D+K +NV
Sbjct: 101 KTPSLIFEYVNNTDF----KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNV 156
Query: 98 LLGSH-GDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDI 155
++ ++L D G A + + G + + ++ + PE+L + + D++ D+
Sbjct: 157 MIDHELRKLRLIDWGLA----EFYHPG---KEYNVRVASRYFKGPELLVDLQDYDYSLDM 209
Query: 156 WSLGCMVIEMATGRPPW 172
WSLGCM M + P+
Sbjct: 210 WSLGCMFAGMIFRKEPF 226
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 19/137 (13%)
Query: 44 KTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNV 97
KT ++ EY+ + TL IR Y E+L H GI+H D+K +NV
Sbjct: 101 KTPSLIFEYVNNTDF----KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNV 156
Query: 98 LLGSH-GDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDI 155
++ ++L D G A + + G + + ++ + PE+L + + D++ D+
Sbjct: 157 MIDHELRKLRLIDWGLA----EFYHPG---KEYNVRVASRYFKGPELLVDLQDYDYSLDM 209
Query: 156 WSLGCMVIEMATGRPPW 172
WSLGCM M + P+
Sbjct: 210 WSLGCMFAGMIFRKEPF 226
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 19/137 (13%)
Query: 44 KTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEIL------HGNGILHCDLKCNNV 97
KT ++ EY+ + TL IR Y E+L H GI+H D+K +NV
Sbjct: 122 KTPSLIFEYVNNTDF----KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNV 177
Query: 98 LLGSH-GDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDI 155
++ ++L D G A + + G + + ++ + PE+L + + D++ D+
Sbjct: 178 MIDHELRKLRLIDWGLA----EFYHPG---KEYNVRVASRYFKGPELLVDLQDYDYSLDM 230
Query: 156 WSLGCMVIEMATGRPPW 172
WSLGCM M + P+
Sbjct: 231 WSLGCMFAGMIFRKEPF 247
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Query: 87 ILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146
++H DL N+L+ +K+ D G +R V + + +K+S I WMA E L +
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYE--EDSXVKRSQGRIPVK--WMAIESLFD 226
Query: 147 EGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLD 205
+D+WS G ++ E+ T G P+ LLK E+P ++ ++
Sbjct: 227 HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSE---EMYR 283
Query: 206 FLAKCLERKPEKR 218
+ +C +++P+KR
Sbjct: 284 LMLQCWKQEPDKR 296
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Query: 87 ILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146
++H DL N+L+ +K+ D G +R V + + +K+S I WMA E L +
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYE--EDSXVKRSQGRIPVK--WMAIESLFD 226
Query: 147 EGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLD 205
+D+WS G ++ E+ T G P+ LLK E+P ++ ++
Sbjct: 227 HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSE---EMYR 283
Query: 206 FLAKCLERKPEKR 218
+ +C +++P+KR
Sbjct: 284 LMLQCWKQEPDKR 296
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Query: 87 ILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146
++H DL N+L+ +K+ D G +R V + + +K+S I WMA E L +
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYE--EDSYVKRSQGRIPVK--WMAIESLFD 226
Query: 147 EGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLD 205
+D+WS G ++ E+ T G P+ LLK E+P ++ ++
Sbjct: 227 HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSE---EMYR 283
Query: 206 FLAKCLERKPEKR 218
+ +C +++P+KR
Sbjct: 284 LMLQCWKQEPDKR 296
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 24/220 (10%)
Query: 15 ESEAGVQALRNE----AEIRQSLNSPNIGRN----GEKTVNIFMEYMAGGSLLDVAEKFG 66
++EA AL++E A + Q L++P I R ++ + ME G L ++
Sbjct: 41 KNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNR 100
Query: 67 GTLDAGVIRLYTK-----EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN 121
D +I L + + L + +H DL NVLL + K+ D G ++ L+
Sbjct: 101 HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA---LRA 157
Query: 122 NGNLKQSWQSIGGTQL-WMAPEVLRNEGLDFATDIWSLGCMVIE-MATGRPPW-GDKISN 178
+ N ++ Q+ G + W APE + +D+WS G ++ E + G+ P+ G K S
Sbjct: 158 DENYYKA-QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 216
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
A L K E+ P +++ D + C E R
Sbjct: 217 VTAMLEK----GERMGCPAGCPREMYDLMNLCWTYDVENR 252
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 20/153 (13%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK-----NNGNLKQSWQSIGG 134
E L +H DL NVL+ +K+ D G AR ++ + NG L W
Sbjct: 156 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKW----- 210
Query: 135 TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKIACSNEK 192
MAPE L + +D+WS G ++ E+ T G P G + L K+ +
Sbjct: 211 ----MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----LFKLLKEGHR 262
Query: 193 PHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
P+ ++ + C P +R + ++L+
Sbjct: 263 MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 295
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 20/153 (13%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK-----NNGNLKQSWQSIGG 134
E L +H DL NVL+ +K+ D G AR ++ + NG L W
Sbjct: 164 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKW----- 218
Query: 135 TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKIACSNEK 192
MAPE L + +D+WS G ++ E+ T G P G + L K+ +
Sbjct: 219 ----MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----LFKLLKEGHR 270
Query: 193 PHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
P+ ++ + C P +R + ++L+
Sbjct: 271 MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 20/153 (13%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK-----NNGNLKQSWQSIGG 134
E L +H DL NVL+ +K+ D G AR ++ + NG L W
Sbjct: 164 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKW----- 218
Query: 135 TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKIACSNEK 192
MAPE L + +D+WS G ++ E+ T G P G + L K+ +
Sbjct: 219 ----MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----LFKLLKEGHR 270
Query: 193 PHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
P+ ++ + C P +R + ++L+
Sbjct: 271 MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 20/153 (13%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK-----NNGNLKQSWQSIGG 134
E L +H DL NVL+ +K+ D G AR ++ + NG L W
Sbjct: 157 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKW----- 211
Query: 135 TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKIACSNEK 192
MAPE L + +D+WS G ++ E+ T G P G + L K+ +
Sbjct: 212 ----MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----LFKLLKEGHR 263
Query: 193 PHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
P+ ++ + C P +R + ++L+
Sbjct: 264 MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 296
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 24/220 (10%)
Query: 15 ESEAGVQALRNE----AEIRQSLNSPNIGRN----GEKTVNIFMEYMAGGSLLDVAEKFG 66
++EA AL++E A + Q L++P I R ++ + ME G L ++
Sbjct: 43 KNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNR 102
Query: 67 GTLDAGVIRLYTK-----EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN 121
D +I L + + L + +H DL NVLL + K+ D G ++ L+
Sbjct: 103 HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA---LRA 159
Query: 122 NGNLKQSWQSIGGTQL-WMAPEVLRNEGLDFATDIWSLGCMVIE-MATGRPPW-GDKISN 178
+ N ++ Q+ G + W APE + +D+WS G ++ E + G+ P+ G K S
Sbjct: 160 DENYYKA-QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 218
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
A L K E+ P +++ D + C E R
Sbjct: 219 VTAMLEK----GERMGCPAGCPREMYDLMNLCWTYDVENR 254
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 92/219 (42%), Gaps = 36/219 (16%)
Query: 46 VNIFMEYMAGGSLLDVAEKFGGTLDAGVI------RLYTKEILH-------------GNG 86
V + EY G LL+ + L+ L T+++LH
Sbjct: 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKN 184
Query: 87 ILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL---WMAPEV 143
+H D+ NVLL + K+ D G AR D+ N+ N + G +L WMAPE
Sbjct: 185 CIHRDVAARNVLLTNGHVAKIGDFGLAR---DIMNDSN----YIVKGNARLPVKWMAPES 237
Query: 144 LRNEGLDFATDIWSLGCMVIEM-ATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQFFK 201
+ + +D+WS G ++ E+ + G P+ G +++ L+K +P F K
Sbjct: 238 IFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAP---K 294
Query: 202 KVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTE 240
+ + C +P R + +++ +F+ A+++ E
Sbjct: 295 NIYSIMQACWALEPTHRPTFQQIC--SFLQEQAQEDRRE 331
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 24/220 (10%)
Query: 15 ESEAGVQALRNE----AEIRQSLNSPNIGRN----GEKTVNIFMEYMAGGSLLDVAEKFG 66
++EA AL++E A + Q L++P I R ++ + ME G L ++
Sbjct: 47 KNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNR 106
Query: 67 GTLDAGVIRLYTK-----EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN 121
D +I L + + L + +H DL NVLL + K+ D G ++ L+
Sbjct: 107 HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA---LRA 163
Query: 122 NGNLKQSWQSIGGTQL-WMAPEVLRNEGLDFATDIWSLGCMVIE-MATGRPPW-GDKISN 178
+ N ++ Q+ G + W APE + +D+WS G ++ E + G+ P+ G K S
Sbjct: 164 DENYYKA-QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 222
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
A L K E+ P +++ D + C E R
Sbjct: 223 VTAMLEK----GERMGCPAGCPREMYDLMNLCWTYDVENR 258
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 20/153 (13%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK-----NNGNLKQSWQSIGG 134
E L +H DL NVL+ +K+ D G AR ++ + NG L W
Sbjct: 153 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKW----- 207
Query: 135 TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKIACSNEK 192
MAPE L + +D+WS G ++ E+ T G P G + L K+ +
Sbjct: 208 ----MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----LFKLLKEGHR 259
Query: 193 PHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
P+ ++ + C P +R + ++L+
Sbjct: 260 MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 292
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 24/220 (10%)
Query: 15 ESEAGVQALRNE----AEIRQSLNSPNIGRN----GEKTVNIFMEYMAGGSLLDVAEKFG 66
++EA AL++E A + Q L++P I R ++ + ME G L ++
Sbjct: 53 KNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNR 112
Query: 67 GTLDAGVIRLYTK-----EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN 121
D +I L + + L + +H DL NVLL + K+ D G ++ L+
Sbjct: 113 HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA---LRA 169
Query: 122 NGNLKQSWQSIGGTQL-WMAPEVLRNEGLDFATDIWSLGCMVIE-MATGRPPW-GDKISN 178
+ N ++ Q+ G + W APE + +D+WS G ++ E + G+ P+ G K S
Sbjct: 170 DENYYKA-QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 228
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
A L K E+ P +++ D + C E R
Sbjct: 229 VTAMLEK----GERMGCPAGCPREMYDLMNLCWTYDVENR 264
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 22/219 (10%)
Query: 15 ESEAGVQALRNE----AEIRQSLNSPNIGRN----GEKTVNIFMEYMAGGSLLDVAEKFG 66
++EA AL++E A + Q L++P I R ++ + ME G L ++
Sbjct: 61 KNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNR 120
Query: 67 GTLDAGVIRLYTK-----EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN 121
D +I L + + L + +H DL NVLL + K+ D G ++ L+
Sbjct: 121 HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA---LRA 177
Query: 122 NGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIE-MATGRPPW-GDKISNA 179
+ N ++ W APE + +D+WS G ++ E + G+ P+ G K S
Sbjct: 178 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 237
Query: 180 AATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
A L K E+ P +++ D + C E R
Sbjct: 238 TAMLEK----GERMGCPAGCPREMYDLMNLCWTYDVENR 272
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 24/220 (10%)
Query: 15 ESEAGVQALRNE----AEIRQSLNSPNIGRN----GEKTVNIFMEYMAGGSLLDVAEKFG 66
++EA AL++E A + Q L++P I R ++ + ME G L ++
Sbjct: 63 KNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNR 122
Query: 67 GTLDAGVIRLYTK-----EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN 121
D +I L + + L + +H DL NVLL + K+ D G ++ L+
Sbjct: 123 HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA---LRA 179
Query: 122 NGNLKQSWQSIGGTQL-WMAPEVLRNEGLDFATDIWSLGCMVIE-MATGRPPW-GDKISN 178
+ N ++ Q+ G + W APE + +D+WS G ++ E + G+ P+ G K S
Sbjct: 180 DENYYKA-QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 238
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
A L K E+ P +++ D + C E R
Sbjct: 239 VTAMLEK----GERMGCPAGCPREMYDLMNLCWTYDVENR 274
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 24/220 (10%)
Query: 15 ESEAGVQALRNE----AEIRQSLNSPNIGRN----GEKTVNIFMEYMAGGSLLDVAEKFG 66
++EA AL++E A + Q L++P I R ++ + ME G L ++
Sbjct: 63 KNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNR 122
Query: 67 GTLDAGVIRLYTK-----EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN 121
D +I L + + L + +H DL NVLL + K+ D G ++ L+
Sbjct: 123 HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA---LRA 179
Query: 122 NGNLKQSWQSIGGTQL-WMAPEVLRNEGLDFATDIWSLGCMVIE-MATGRPPW-GDKISN 178
+ N ++ Q+ G + W APE + +D+WS G ++ E + G+ P+ G K S
Sbjct: 180 DENYYKA-QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 238
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
A L K E+ P +++ D + C E R
Sbjct: 239 VTAMLEK----GERMGCPAGCPREMYDLMNLCWTYDVENR 274
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 37/201 (18%)
Query: 2 NKGTGALFVVKSAESEA---GVQALRNEAEIRQSLNSPNIGR----NGEKTVN---IFME 51
+K TG LF +K + + V E E+ + LN NI + E T + ME
Sbjct: 30 HKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89
Query: 52 YMAGGSLLDVAEKFGGT--LDAGVIRLYTKEILHG------NGILHCDLKCNNVL--LGS 101
+ GSL V E+ L + ++++ G NGI+H ++K N++ +G
Sbjct: 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGE 149
Query: 102 HGD--VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPE-----VLRNEG---LDF 151
G KL D G AR + D + + + GT+ ++ P+ VLR +
Sbjct: 150 DGQSVYKLTDFGAARELED-------DEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGA 202
Query: 152 ATDIWSLGCMVIEMATGRPPW 172
D+WS+G ATG P+
Sbjct: 203 TVDLWSIGVTFYHAATGSLPF 223
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 20/153 (13%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK-----NNGNLKQSWQSIGG 134
E L +H DL NVL+ +K+ D G AR ++ + NG L W
Sbjct: 164 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKW----- 218
Query: 135 TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKIACSNEK 192
MAPE L + +D+WS G ++ E+ T G P G + L K+ +
Sbjct: 219 ----MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----LFKLLKEGHR 270
Query: 193 PHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
P+ ++ + C P +R + ++L+
Sbjct: 271 MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 20/153 (13%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK-----NNGNLKQSWQSIGG 134
E L +H DL NVL+ +K+ D G AR ++ + NG L W
Sbjct: 149 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKW----- 203
Query: 135 TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKIACSNEK 192
MAPE L + +D+WS G ++ E+ T G P G + L K+ +
Sbjct: 204 ----MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----LFKLLKEGHR 255
Query: 193 PHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
P+ ++ + C P +R + ++L+
Sbjct: 256 MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 288
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 14/149 (9%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL---- 137
L+ +H DL N ++ VK+ D G R + + ++ GG L
Sbjct: 146 LNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE--------TAYYRKGGKGLLPVR 197
Query: 138 WMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPT 197
WMAPE L++ ++D+WS G ++ E+ + +SN +LK P
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--EQVLKFVMDGGYLDQPD 255
Query: 198 QFFKKVLDFLAKCLERKPEKRWSAEELLN 226
++V D + C + P+ R + E++N
Sbjct: 256 NCPERVTDLMRMCWQFNPKMRPTFLEIVN 284
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 24/220 (10%)
Query: 15 ESEAGVQALRNE----AEIRQSLNSPNIGRN----GEKTVNIFMEYMAGGSLLDVAEKFG 66
++EA AL++E A + Q L++P I R ++ + ME G L ++
Sbjct: 47 KNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNR 106
Query: 67 GTLDAGVIRLYTK-----EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN 121
D +I L + + L + +H DL NVLL + K+ D G ++ L+
Sbjct: 107 HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA---LRA 163
Query: 122 NGNLKQSWQSIGGTQL-WMAPEVLRNEGLDFATDIWSLGCMVIE-MATGRPPW-GDKISN 178
+ N ++ Q+ G + W APE + +D+WS G ++ E + G+ P+ G K S
Sbjct: 164 DENXYKA-QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 222
Query: 179 AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
A L K E+ P +++ D + C E R
Sbjct: 223 VTAMLEK----GERMGCPAGCPREMYDLMNLCWTYDVENR 258
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 20/153 (13%)
Query: 80 EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLK-----NNGNLKQSWQSIGG 134
E L +H DL NVL+ +K+ D G AR ++ + NG L W
Sbjct: 164 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKW----- 218
Query: 135 TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKIACSNEK 192
MAPE L + +D+WS G ++ E+ T G P G + L K+ +
Sbjct: 219 ----MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----LFKLLKEGHR 270
Query: 193 PHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225
P+ ++ + C P +R + ++L+
Sbjct: 271 MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 14/149 (9%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL---- 137
L+ +H DL N ++ VK+ D G R + + + GG L
Sbjct: 145 LNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE--------TDYYRKGGKGLLPVR 196
Query: 138 WMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPT 197
WMAPE L++ ++D+WS G ++ E+ + +SN +LK P
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--EQVLKFVMDGGYLDQPD 254
Query: 198 QFFKKVLDFLAKCLERKPEKRWSAEELLN 226
++V D + C + P+ R + E++N
Sbjct: 255 NCPERVTDLMRMCWQFNPKMRPTFLEIVN 283
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 32/212 (15%)
Query: 46 VNIFMEYMAGGSLL---------DVAEKFGGTLDAGVIRLYTKEILHGNGIL------HC 90
V + EY G LL D+ ++ G L+ + ++ ++ G L H
Sbjct: 117 VLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHR 176
Query: 91 DLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL---WMAPEVLRNE 147
D+ NVLL + K+ D G AR D+ N+ N + G +L WMAPE + +
Sbjct: 177 DVAARNVLLTNGHVAKIGDFGLAR---DIMNDSN----YIVKGNARLPVKWMAPESIFDC 229
Query: 148 GLDFATDIWSLGCMVIEM-ATGRPPW-GDKISNAAATLLKIACSNEKPHFPTQFFKKVLD 205
+D+WS G ++ E+ + G P+ G +++ L+K +P F K +
Sbjct: 230 VYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAP---KNIYS 286
Query: 206 FLAKCLERKPEKRWSAEELLNHTFISGNAKKN 237
+ C +P R + +++ +F+ A+++
Sbjct: 287 IMQACWALEPTHRPTFQQIC--SFLQEQAQED 316
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 17/165 (10%)
Query: 81 ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL--- 137
L +H D+ NVLL + K+ D G AR D+ N+ N + G +L
Sbjct: 179 FLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR---DIMNDSN----YIVKGNARLPVK 231
Query: 138 WMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPW-GDKISNAAATLLKIACSNEKPHF 195
WMAPE + + +D+WS G ++ E+ + G P+ G +++ L+K +P F
Sbjct: 232 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAF 291
Query: 196 PTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTE 240
K + + C +P R + +++ +F+ A+++ E
Sbjct: 292 AP---KNIYSIMQACWALEPTHRPTFQQIC--SFLQEQAQEDRRE 331
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 14/149 (9%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL---- 137
L+ +H DL N ++ VK+ D G R + + + GG L
Sbjct: 146 LNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI--------YETDYYRKGGKGLLPVR 197
Query: 138 WMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPT 197
WMAPE L++ ++D+WS G ++ E+ + +SN +LK P
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--EQVLKFVMDGGYLDQPD 255
Query: 198 QFFKKVLDFLAKCLERKPEKRWSAEELLN 226
++V D + C + P+ R + E++N
Sbjct: 256 NCPERVTDLMRMCWQFNPKMRPTFLEIVN 284
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 17/165 (10%)
Query: 81 ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL--- 137
L +H D+ NVLL + K+ D G AR D+ N+ N + G +L
Sbjct: 181 FLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR---DIMNDSN----YIVKGNARLPVK 233
Query: 138 WMAPEVLRNEGLDFATDIWSLGCMVIEM-ATGRPPW-GDKISNAAATLLKIACSNEKPHF 195
WMAPE + + +D+WS G ++ E+ + G P+ G +++ L+K +P F
Sbjct: 234 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAF 293
Query: 196 PTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTE 240
K + + C +P R + +++ +F+ A+++ E
Sbjct: 294 AP---KNIYSIMQACWALEPTHRPTFQQIC--SFLQEQAQEDRRE 333
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 18/186 (9%)
Query: 15 ESEAGVQALRNE----AEIRQSLNSPNIGRN----GEKTVNIFMEYMAGGSLLDVAEKFG 66
++EA AL++E A + Q L++P I R ++ + ME G L ++
Sbjct: 405 KNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNR 464
Query: 67 GTLDAGVIRLYTK-----EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN 121
D +I L + + L + +H DL NVLL + K+ D G ++ L+
Sbjct: 465 HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA---LRA 521
Query: 122 NGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIE-MATGRPPW-GDKISNA 179
+ N ++ W APE + +D+WS G ++ E + G+ P+ G K S
Sbjct: 522 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 581
Query: 180 AATLLK 185
A L K
Sbjct: 582 TAMLEK 587
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 18/151 (11%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL---- 137
L+ N +H DL N ++ VK+ D G R + + + GG L
Sbjct: 176 LNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE--------TDYYRKGGKGLLPVR 227
Query: 138 WMAPEVLRNEGLDFATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKIACSNEKPHF 195
WM+PE L++ +D+WS G ++ E+AT +P G +++ ++ +
Sbjct: 228 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC 287
Query: 196 PTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226
P F + + C + P+ R S E+++
Sbjct: 288 PDMLF----ELMRMCWQYNPKMRPSFLEIIS 314
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 22/219 (10%)
Query: 15 ESEAGVQALRNE----AEIRQSLNSPNIGRN----GEKTVNIFMEYMAGGSLLDVAEKFG 66
++EA AL++E A + Q L++P I R ++ + ME G L ++
Sbjct: 406 KNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNR 465
Query: 67 GTLDAGVIRLYTK-----EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN 121
D +I L + + L + +H DL NVLL + K+ D G ++ L+
Sbjct: 466 HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA---LRA 522
Query: 122 NGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIE-MATGRPPW-GDKISNA 179
+ N ++ W APE + +D+WS G ++ E + G+ P+ G K S
Sbjct: 523 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 582
Query: 180 AATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218
A L K E+ P +++ D + C E R
Sbjct: 583 TAMLEK----GERMGCPAGCPREMYDLMNLCWTYDVENR 617
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL---- 137
L+ N +H DL N ++ VK+ D G R + + + GG L
Sbjct: 154 LNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI--------YETDYYRKGGKGLLPVR 205
Query: 138 WMAPEVLRNEGLDFATDIWSLGCMVIEMAT 167
WM+PE L++ +D+WS G ++ E+AT
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL---- 137
L+ N +H DL N ++ VK+ D G R + + + GG L
Sbjct: 148 LNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE--------TDYYRKGGKGLLPVR 199
Query: 138 WMAPEVLRNEGLDFATDIWSLGCMVIEMAT 167
WM+PE L++ +D+WS G ++ E+AT
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 82 LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL---- 137
L+ N +H DL N ++ VK+ D G R + + + GG L
Sbjct: 154 LNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE--------TDYYRKGGKGLLPVR 205
Query: 138 WMAPEVLRNEGLDFATDIWSLGCMVIEMAT 167
WM+PE L++ +D+WS G ++ E+AT
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,590,353
Number of Sequences: 62578
Number of extensions: 324363
Number of successful extensions: 3137
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 223
Number of HSP's that attempted gapping in prelim test: 772
Number of HSP's gapped (non-prelim): 1141
length of query: 241
length of database: 14,973,337
effective HSP length: 96
effective length of query: 145
effective length of database: 8,965,849
effective search space: 1300048105
effective search space used: 1300048105
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.9 bits)