Query 042809
Match_columns 241
No_of_seqs 159 out of 1329
Neff 11.0
Searched_HMMs 46136
Date Fri Mar 29 09:43:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042809.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042809hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0581 Mitogen-activated prot 100.0 2.1E-53 4.5E-58 321.0 16.7 227 1-236 99-344 (364)
2 KOG0615 Serine/threonine prote 100.0 3.7E-54 8.1E-59 328.3 9.4 225 2-234 193-444 (475)
3 KOG0575 Polo-like serine/threo 100.0 1.2E-50 2.6E-55 322.7 17.5 221 2-233 39-275 (592)
4 KOG0592 3-phosphoinositide-dep 100.0 3.9E-49 8.4E-54 310.1 16.2 229 1-234 93-345 (604)
5 KOG0598 Ribosomal protein S6 k 100.0 1.9E-48 4.1E-53 294.0 16.0 222 2-233 46-287 (357)
6 KOG0595 Serine/threonine-prote 100.0 6.3E-48 1.4E-52 294.1 17.0 227 1-236 30-277 (429)
7 KOG0198 MEKK and related serin 100.0 1.6E-47 3.5E-52 292.6 15.8 230 2-235 38-284 (313)
8 KOG0588 Serine/threonine prote 100.0 1.5E-47 3.3E-52 307.3 15.8 225 2-238 33-274 (786)
9 KOG0583 Serine/threonine prote 100.0 6.8E-47 1.5E-51 299.7 18.2 220 2-232 38-280 (370)
10 KOG0033 Ca2+/calmodulin-depend 100.0 3.1E-47 6.7E-52 273.1 10.6 226 1-234 31-274 (355)
11 KOG0593 Predicted protein kina 100.0 3.8E-46 8.2E-51 274.7 16.1 225 1-232 22-289 (396)
12 KOG0578 p21-activated serine/t 100.0 3.7E-46 8E-51 294.8 15.0 222 2-233 294-529 (550)
13 KOG0616 cAMP-dependent protein 100.0 7.9E-46 1.7E-50 272.0 14.8 219 1-233 64-303 (355)
14 KOG0605 NDR and related serine 100.0 1.9E-45 4E-50 289.1 17.5 231 2-234 162-452 (550)
15 KOG0582 Ste20-like serine/thre 100.0 3.1E-45 6.6E-50 282.2 17.1 228 3-235 48-301 (516)
16 KOG0597 Serine-threonine prote 100.0 2.8E-45 6.1E-50 290.0 16.8 223 1-235 22-259 (808)
17 KOG0591 NIMA (never in mitosis 100.0 3.1E-45 6.7E-50 267.5 13.8 211 2-221 40-275 (375)
18 KOG0599 Phosphorylase kinase g 100.0 2.4E-45 5.2E-50 267.4 12.5 227 1-235 37-291 (411)
19 KOG0600 Cdc2-related protein k 100.0 1.4E-44 2.9E-49 282.3 17.2 228 1-234 137-407 (560)
20 KOG0192 Tyrosine kinase specif 100.0 7E-44 1.5E-48 280.2 20.1 213 6-226 64-298 (362)
21 cd05612 STKc_PRKX_like Catalyt 100.0 7.1E-44 1.5E-48 278.0 18.4 218 2-233 22-260 (291)
22 cd05571 STKc_PKB Catalytic dom 100.0 3.8E-44 8.2E-49 283.3 17.1 220 2-232 16-256 (323)
23 KOG0660 Mitogen-activated prot 100.0 3.8E-44 8.3E-49 269.9 15.5 232 1-238 42-321 (359)
24 KOG0694 Serine/threonine prote 100.0 2E-44 4.3E-49 290.6 14.8 219 2-232 389-629 (694)
25 cd05631 STKc_GRK4 Catalytic do 100.0 9.6E-44 2.1E-48 276.5 17.6 227 2-235 21-269 (285)
26 PTZ00263 protein kinase A cata 100.0 7.8E-44 1.7E-48 282.1 16.8 218 2-233 39-277 (329)
27 KOG0663 Protein kinase PITSLRE 100.0 1.8E-43 3.9E-48 263.6 15.8 230 1-237 96-371 (419)
28 cd05585 STKc_YPK1_like Catalyt 100.0 2.5E-43 5.5E-48 277.4 17.5 221 2-233 14-253 (312)
29 KOG4717 Serine/threonine prote 100.0 4.4E-43 9.5E-48 275.3 18.4 227 2-239 39-282 (864)
30 cd05595 STKc_PKB_beta Catalyti 100.0 5.1E-43 1.1E-47 276.8 18.7 221 2-233 16-257 (323)
31 cd05593 STKc_PKB_gamma Catalyt 100.0 4E-43 8.7E-48 277.9 17.8 221 2-233 16-257 (328)
32 KOG0585 Ca2+/calmodulin-depend 100.0 1.4E-43 3E-48 274.9 14.6 228 1-235 117-380 (576)
33 KOG0659 Cdk activating kinase 100.0 7.2E-43 1.6E-47 252.9 16.8 228 1-235 22-289 (318)
34 KOG0611 Predicted serine/threo 100.0 3.4E-43 7.4E-48 268.9 15.3 218 2-232 74-308 (668)
35 cd05608 STKc_GRK1 Catalytic do 100.0 1.4E-42 3E-47 269.3 19.0 226 2-233 14-263 (280)
36 KOG0661 MAPK related serine/th 100.0 5.2E-43 1.1E-47 271.8 16.1 225 2-236 31-300 (538)
37 KOG0032 Ca2+/calmodulin-depend 100.0 1.5E-42 3.2E-47 274.9 19.1 226 2-236 56-302 (382)
38 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 8.2E-43 1.8E-47 276.9 17.3 222 2-233 22-263 (333)
39 cd06649 PKc_MEK2 Catalytic dom 100.0 4.3E-42 9.2E-47 272.5 20.7 226 2-236 26-310 (331)
40 KOG0197 Tyrosine kinases [Sign 100.0 5.1E-43 1.1E-47 275.8 14.9 211 7-225 231-455 (468)
41 KOG0201 Serine/threonine prote 100.0 2.3E-44 5E-49 276.8 6.8 223 1-233 33-269 (467)
42 cd05590 STKc_nPKC_eta Catalyti 100.0 1.8E-42 3.9E-47 273.4 17.7 221 2-233 16-259 (320)
43 PTZ00426 cAMP-dependent protei 100.0 1.5E-42 3.1E-47 275.6 17.3 214 6-233 56-290 (340)
44 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.9E-42 6.2E-47 268.6 18.5 222 2-230 26-288 (288)
45 cd07848 STKc_CDKL5 Catalytic d 100.0 3.1E-42 6.7E-47 268.3 18.4 223 2-230 22-287 (287)
46 cd05594 STKc_PKB_alpha Catalyt 100.0 8.3E-43 1.8E-47 275.9 15.1 221 2-233 16-258 (325)
47 cd05584 STKc_p70S6K Catalytic 100.0 3.7E-42 8.1E-47 271.9 18.3 220 3-233 21-262 (323)
48 PLN00034 mitogen-activated pro 100.0 8.5E-42 1.8E-46 273.0 19.7 224 2-236 95-337 (353)
49 cd05614 STKc_MSK2_N N-terminal 100.0 3.9E-42 8.5E-47 272.9 17.6 225 3-233 25-273 (332)
50 cd05620 STKc_nPKC_delta Cataly 100.0 5.8E-42 1.3E-46 270.0 18.2 221 2-233 16-254 (316)
51 cd07859 STKc_TDY_MAPK_plant Ca 100.0 7.4E-42 1.6E-46 272.1 18.9 229 2-235 21-298 (338)
52 cd05588 STKc_aPKC Catalytic do 100.0 6.1E-42 1.3E-46 271.3 18.2 224 2-232 16-267 (329)
53 cd05628 STKc_NDR1 Catalytic do 100.0 1.1E-41 2.3E-46 273.3 19.3 228 2-233 22-299 (363)
54 cd05573 STKc_ROCK_NDR_like Cat 100.0 2.7E-42 5.9E-47 275.8 15.7 230 2-233 22-291 (350)
55 cd05605 STKc_GRK4_like Catalyt 100.0 1.3E-41 2.8E-46 264.5 19.0 225 2-233 21-267 (285)
56 cd05599 STKc_NDR_like Catalyti 100.0 3.7E-42 7.9E-47 276.4 16.3 228 2-233 22-302 (364)
57 cd05626 STKc_LATS2 Catalytic d 100.0 7.1E-42 1.5E-46 276.0 17.9 229 2-233 22-311 (381)
58 KOG0610 Putative serine/threon 100.0 2.3E-41 4.9E-46 258.7 19.6 228 2-233 98-398 (459)
59 cd05601 STKc_CRIK Catalytic do 100.0 2.2E-42 4.8E-47 274.1 14.4 226 2-233 22-269 (330)
60 KOG0589 Serine/threonine prote 100.0 4.1E-42 8.8E-47 269.7 15.3 225 1-234 24-265 (426)
61 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2E-41 4.3E-46 265.7 19.1 226 2-234 26-295 (303)
62 cd05598 STKc_LATS Catalytic do 100.0 2.7E-42 5.7E-47 278.2 14.3 230 2-233 22-307 (376)
63 cd05591 STKc_nPKC_epsilon Cata 100.0 1E-41 2.3E-46 269.2 17.4 220 2-232 16-259 (321)
64 cd05618 STKc_aPKC_iota Catalyt 100.0 9.6E-42 2.1E-46 270.1 17.2 225 2-233 16-268 (329)
65 cd05619 STKc_nPKC_theta Cataly 100.0 1.9E-41 4E-46 267.0 18.6 221 2-233 16-254 (316)
66 cd05570 STKc_PKC Catalytic dom 100.0 1.9E-41 4E-46 267.4 18.6 221 2-233 16-258 (318)
67 cd05596 STKc_ROCK Catalytic do 100.0 9.3E-42 2E-46 274.0 17.0 223 2-233 64-310 (370)
68 cd05582 STKc_RSK_N N-terminal 100.0 3.7E-42 8E-47 271.5 14.3 221 2-233 20-260 (318)
69 cd05592 STKc_nPKC_theta_delta 100.0 2.1E-41 4.6E-46 266.8 18.5 221 2-233 16-254 (316)
70 cd05589 STKc_PKN Catalytic dom 100.0 1.9E-41 4.1E-46 268.1 18.3 220 2-233 20-263 (324)
71 cd05587 STKc_cPKC Catalytic do 100.0 2.6E-41 5.7E-46 267.3 18.9 221 2-233 21-263 (324)
72 cd05575 STKc_SGK Catalytic dom 100.0 1.6E-41 3.5E-46 268.4 17.0 221 2-233 16-257 (323)
73 cd05629 STKc_NDR_like_fungal C 100.0 1.1E-41 2.3E-46 274.7 16.1 228 2-233 22-311 (377)
74 cd05625 STKc_LATS1 Catalytic d 100.0 1.3E-41 2.8E-46 274.7 16.5 230 2-233 22-311 (382)
75 cd06650 PKc_MEK1 Catalytic dom 100.0 7.3E-41 1.6E-45 265.5 20.5 226 2-236 26-308 (333)
76 KOG0580 Serine/threonine prote 100.0 5.8E-42 1.3E-46 244.7 12.1 220 2-233 43-279 (281)
77 cd05621 STKc_ROCK2 Catalytic d 100.0 2.8E-41 6.1E-46 271.0 16.3 223 2-233 64-310 (370)
78 cd05607 STKc_GRK7 Catalytic do 100.0 8.8E-41 1.9E-45 258.8 18.6 225 2-233 14-260 (277)
79 PTZ00267 NIMA-related protein 100.0 6.3E-41 1.4E-45 277.1 18.7 220 6-232 93-328 (478)
80 cd05617 STKc_aPKC_zeta Catalyt 100.0 6.7E-41 1.5E-45 265.1 18.0 225 2-233 16-266 (327)
81 cd05630 STKc_GRK6 Catalytic do 100.0 7E-41 1.5E-45 260.4 17.3 225 2-233 21-267 (285)
82 KOG0604 MAP kinase-activated p 100.0 5.2E-42 1.1E-46 252.6 10.0 224 2-235 83-330 (400)
83 cd05627 STKc_NDR2 Catalytic do 100.0 2.4E-41 5.2E-46 271.1 14.6 228 2-233 22-299 (360)
84 PHA03212 serine/threonine kina 100.0 2.4E-40 5.2E-45 267.1 20.2 222 2-234 113-383 (391)
85 cd06625 STKc_MEKK3_like Cataly 100.0 3.6E-40 7.8E-45 253.5 20.3 223 2-230 23-263 (263)
86 cd05622 STKc_ROCK1 Catalytic d 100.0 9.9E-41 2.2E-45 268.1 17.0 225 2-233 64-310 (371)
87 cd06628 STKc_MAPKKK_Byr2_like 100.0 4.2E-40 9.2E-45 253.7 19.5 225 2-230 21-267 (267)
88 KOG0574 STE20-like serine/thre 100.0 5.1E-42 1.1E-46 253.5 8.4 226 1-235 53-291 (502)
89 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 5.5E-40 1.2E-44 255.5 20.3 227 2-236 22-271 (286)
90 cd06612 STKc_MST1_2 Catalytic 100.0 5.1E-40 1.1E-44 251.7 19.7 221 3-230 25-256 (256)
91 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.9E-40 6.3E-45 259.8 18.4 227 2-235 27-294 (309)
92 cd05604 STKc_SGK3 Catalytic do 100.0 9.5E-41 2.1E-45 264.2 15.4 221 2-233 16-257 (325)
93 cd05615 STKc_cPKC_alpha Cataly 100.0 4.1E-40 8.8E-45 260.3 19.0 221 2-233 21-263 (323)
94 cd05616 STKc_cPKC_beta Catalyt 100.0 2.5E-40 5.4E-45 261.6 17.7 221 2-233 21-263 (323)
95 cd08529 STKc_FA2-like Catalyti 100.0 1.5E-39 3.3E-44 249.1 21.3 220 2-230 21-256 (256)
96 cd05632 STKc_GRK5 Catalytic do 100.0 4.4E-40 9.5E-45 255.9 18.5 227 2-235 21-269 (285)
97 cd05572 STKc_cGK_PKG Catalytic 100.0 6.3E-40 1.4E-44 252.1 19.1 224 2-233 14-258 (262)
98 KOG0596 Dual specificity; seri 100.0 9.3E-41 2E-45 263.5 14.6 228 4-238 383-638 (677)
99 PTZ00283 serine/threonine prot 100.0 4.5E-40 9.7E-45 272.4 19.2 224 2-232 53-302 (496)
100 KOG4279 Serine/threonine prote 100.0 7.4E-41 1.6E-45 270.8 14.1 231 1-238 595-843 (1226)
101 cd08223 STKc_Nek4 Catalytic do 100.0 1.9E-39 4.2E-44 248.6 21.3 220 2-230 21-257 (257)
102 PHA02988 hypothetical protein; 100.0 9.2E-40 2E-44 253.7 19.7 211 4-226 41-274 (283)
103 cd05603 STKc_SGK2 Catalytic do 100.0 2.6E-40 5.6E-45 261.3 16.9 220 2-232 16-256 (321)
104 PTZ00036 glycogen synthase kin 100.0 3E-40 6.5E-45 270.3 17.6 222 2-233 87-357 (440)
105 cd05602 STKc_SGK1 Catalytic do 100.0 2.5E-40 5.5E-45 261.8 16.4 220 2-232 16-256 (325)
106 cd06605 PKc_MAPKK Catalytic do 100.0 1.2E-39 2.5E-44 251.0 19.6 224 2-233 22-263 (265)
107 cd08227 PK_STRAD_alpha Pseudok 100.0 6.9E-40 1.5E-44 259.5 18.9 233 2-234 21-314 (327)
108 cd07853 STKc_NLK Catalytic dom 100.0 9.2E-40 2E-44 263.0 19.5 225 2-233 21-294 (372)
109 KOG0658 Glycogen synthase kina 100.0 2.4E-41 5.2E-46 255.2 9.4 224 3-236 46-315 (364)
110 cd07876 STKc_JNK2 Catalytic do 100.0 7.5E-40 1.6E-44 262.4 18.7 220 2-232 42-320 (359)
111 cd06643 STKc_SLK Catalytic dom 100.0 1.5E-39 3.3E-44 252.5 19.7 228 2-236 26-271 (282)
112 cd06611 STKc_SLK_like Catalyti 100.0 1.5E-39 3.3E-44 252.3 19.6 225 2-235 26-270 (280)
113 KOG1026 Nerve growth factor re 100.0 1.1E-40 2.4E-45 275.1 13.8 214 5-225 515-756 (774)
114 cd06631 STKc_YSK4 Catalytic do 100.0 3.2E-39 6.9E-44 248.6 20.9 225 4-230 22-265 (265)
115 cd06609 STKc_MST3_like Catalyt 100.0 1.5E-39 3.2E-44 251.6 19.0 224 2-236 22-260 (274)
116 cd07862 STKc_CDK6 Catalytic do 100.0 1.2E-39 2.6E-44 254.1 18.4 218 5-230 26-290 (290)
117 cd05577 STKc_GRK Catalytic dom 100.0 1.5E-39 3.2E-44 252.0 18.5 226 2-234 14-261 (277)
118 KOG4645 MAPKKK (MAP kinase kin 100.0 7.9E-42 1.7E-46 291.3 6.2 236 1-241 1255-1508(1509)
119 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.5E-39 3.2E-44 259.3 18.8 222 2-235 36-306 (343)
120 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.4E-39 3E-44 259.0 18.6 218 3-226 34-329 (338)
121 cd06615 PKc_MEK Catalytic doma 100.0 2.3E-39 4.9E-44 254.5 19.5 226 2-236 22-296 (308)
122 KOG0986 G protein-coupled rece 100.0 3.6E-41 7.7E-46 260.4 8.9 224 3-233 207-452 (591)
123 cd06644 STKc_STK10_LOK Catalyt 100.0 5.2E-39 1.1E-43 250.8 21.3 224 2-234 33-276 (292)
124 cd07868 STKc_CDK8 Catalytic do 100.0 2.6E-39 5.6E-44 255.3 19.6 224 3-230 25-317 (317)
125 cd07875 STKc_JNK1 Catalytic do 100.0 1.6E-39 3.5E-44 260.9 18.8 220 2-232 45-323 (364)
126 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.5E-39 5.5E-44 253.6 19.4 227 2-235 27-294 (301)
127 cd05597 STKc_DMPK_like Catalyt 100.0 1E-39 2.3E-44 258.8 17.3 227 2-233 22-272 (331)
128 cd06655 STKc_PAK2 Catalytic do 100.0 2.4E-39 5.2E-44 253.0 19.1 224 2-234 40-276 (296)
129 cd07841 STKc_CDK7 Catalytic do 100.0 3.2E-39 7E-44 252.6 19.8 233 2-241 21-296 (298)
130 cd06624 STKc_ASK Catalytic dom 100.0 4.2E-39 9E-44 248.3 20.1 222 2-230 29-268 (268)
131 cd05580 STKc_PKA Catalytic dom 100.0 2.6E-39 5.7E-44 252.2 19.0 219 2-234 22-261 (290)
132 cd06654 STKc_PAK1 Catalytic do 100.0 2.8E-39 6.1E-44 252.7 19.2 224 2-234 41-277 (296)
133 cd06651 STKc_MEKK3 Catalytic d 100.0 5E-39 1.1E-43 247.7 20.1 223 2-231 23-265 (266)
134 cd06658 STKc_PAK5 Catalytic do 100.0 2.7E-39 5.7E-44 252.3 18.8 227 2-237 43-282 (292)
135 cd06630 STKc_MEKK1 Catalytic d 100.0 6E-39 1.3E-43 247.4 20.3 227 2-231 21-268 (268)
136 cd06640 STKc_MST4 Catalytic do 100.0 4.7E-39 1E-43 249.2 19.7 225 2-237 25-263 (277)
137 cd05586 STKc_Sck1_like Catalyt 100.0 4.5E-40 9.8E-45 260.9 14.0 221 2-233 14-259 (330)
138 KOG4721 Serine/threonine prote 100.0 9.1E-41 2E-45 264.8 9.9 209 5-228 146-365 (904)
139 cd06619 PKc_MKK5 Catalytic dom 100.0 3.5E-39 7.5E-44 250.2 18.6 223 2-237 22-263 (279)
140 cd07874 STKc_JNK3 Catalytic do 100.0 3.7E-39 8.1E-44 258.1 19.3 221 2-233 38-317 (355)
141 cd08217 STKc_Nek2 Catalytic do 100.0 1E-38 2.2E-43 245.5 21.0 220 2-230 21-265 (265)
142 cd05578 STKc_Yank1 Catalytic d 100.0 3.1E-39 6.6E-44 247.7 17.9 220 2-230 21-258 (258)
143 cd06656 STKc_PAK3 Catalytic do 100.0 2.7E-39 5.9E-44 252.9 17.9 225 2-235 40-277 (297)
144 PF00069 Pkinase: Protein kina 100.0 8.6E-40 1.9E-44 250.9 14.8 222 2-230 20-260 (260)
145 cd07863 STKc_CDK4 Catalytic do 100.0 3.5E-39 7.5E-44 251.3 18.3 221 2-230 21-288 (288)
146 KOG0667 Dual-specificity tyros 100.0 1.6E-39 3.4E-44 261.6 16.6 223 2-234 207-509 (586)
147 KOG0594 Protein kinase PCTAIRE 100.0 2.7E-39 5.9E-44 244.0 16.7 230 1-237 31-312 (323)
148 PHA03207 serine/threonine kina 100.0 2.3E-39 5.1E-44 262.1 17.6 224 3-235 116-383 (392)
149 cd06637 STKc_TNIK Catalytic do 100.0 7.3E-39 1.6E-43 247.4 19.5 221 2-230 27-272 (272)
150 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.1E-39 4.6E-44 251.2 16.4 223 2-235 25-261 (277)
151 cd05574 STKc_phototropin_like 100.0 6E-39 1.3E-43 253.1 19.1 230 2-233 22-295 (316)
152 cd06632 STKc_MEKK1_plant Catal 100.0 1E-38 2.2E-43 244.7 19.8 219 2-230 21-258 (258)
153 cd08218 STKc_Nek1 Catalytic do 100.0 7.3E-39 1.6E-43 245.3 19.0 220 2-230 21-256 (256)
154 cd05623 STKc_MRCK_alpha Cataly 100.0 2.2E-39 4.8E-44 257.0 16.2 225 2-233 22-272 (332)
155 cd06613 STKc_MAP4K3_like Catal 100.0 1.7E-38 3.7E-43 244.0 20.6 222 2-229 24-262 (262)
156 PTZ00284 protein kinase; Provi 100.0 5.6E-39 1.2E-43 265.3 19.1 223 2-235 150-446 (467)
157 cd07839 STKc_CDK5 Catalytic do 100.0 5.6E-39 1.2E-43 249.6 17.9 222 2-230 21-284 (284)
158 cd06648 STKc_PAK_II Catalytic 100.0 1.2E-38 2.7E-43 247.8 19.8 223 2-235 40-277 (285)
159 cd06652 STKc_MEKK2 Catalytic d 100.0 2.3E-38 5E-43 243.8 21.0 223 2-231 23-265 (265)
160 PHA03209 serine/threonine kina 100.0 5.8E-39 1.2E-43 256.9 17.9 219 2-232 87-356 (357)
161 PHA03211 serine/threonine kina 100.0 6.8E-39 1.5E-43 261.9 18.6 222 2-232 190-460 (461)
162 cd06623 PKc_MAPKK_plant_like C 100.0 1.3E-38 2.8E-43 244.9 19.1 225 2-233 22-262 (264)
163 cd06645 STKc_MAP4K3 Catalytic 100.0 1E-38 2.3E-43 246.0 18.6 219 2-229 30-267 (267)
164 cd05633 STKc_GRK3 Catalytic do 100.0 1.1E-38 2.4E-43 247.3 18.4 223 2-234 15-262 (279)
165 cd08220 STKc_Nek8 Catalytic do 100.0 1.5E-38 3.3E-43 243.5 18.9 219 2-230 21-256 (256)
166 cd08221 STKc_Nek9 Catalytic do 100.0 3.7E-38 8E-43 241.5 20.8 220 2-230 21-256 (256)
167 cd05624 STKc_MRCK_beta Catalyt 100.0 3.5E-39 7.6E-44 255.7 15.3 225 2-233 22-272 (331)
168 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 3.5E-38 7.7E-43 245.5 20.6 227 2-236 22-275 (287)
169 cd05609 STKc_MAST Catalytic do 100.0 2.5E-38 5.4E-43 248.4 19.8 231 2-234 22-280 (305)
170 cd07867 STKc_CDC2L6 Catalytic 100.0 5E-39 1.1E-43 253.6 15.9 224 3-230 25-317 (317)
171 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 3.6E-38 7.9E-43 245.1 20.4 225 2-235 26-274 (284)
172 cd07861 STKc_CDK1_euk Catalyti 100.0 1.7E-38 3.6E-43 247.0 18.3 222 2-230 21-285 (285)
173 KOG0579 Ste20-like serine/thre 100.0 4.7E-39 1E-43 258.3 15.4 226 2-236 53-298 (1187)
174 cd07832 STKc_CCRK Catalytic do 100.0 2.9E-38 6.2E-43 245.8 19.3 224 2-231 21-286 (286)
175 cd05084 PTKc_Fes Catalytic dom 100.0 5E-38 1.1E-42 240.2 20.3 218 2-226 16-248 (252)
176 cd08216 PK_STRAD Pseudokinase 100.0 4.8E-38 1E-42 247.7 20.6 232 2-235 21-303 (314)
177 KOG0690 Serine/threonine prote 100.0 8.1E-40 1.8E-44 244.0 9.8 221 2-233 189-430 (516)
178 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.9E-38 4.1E-43 246.8 17.9 222 2-230 22-286 (286)
179 cd05064 PTKc_EphR_A10 Catalyti 100.0 4.8E-38 1E-42 242.2 19.8 215 4-226 31-260 (266)
180 cd06659 STKc_PAK6 Catalytic do 100.0 3E-38 6.6E-43 246.9 18.9 225 2-235 42-279 (297)
181 cd06641 STKc_MST3 Catalytic do 100.0 3.2E-38 6.9E-43 244.5 18.7 225 2-237 25-263 (277)
182 cd06636 STKc_MAP4K4_6 Catalyti 100.0 4.7E-38 1E-42 244.2 19.5 221 2-230 37-282 (282)
183 cd05579 STKc_MAST_like Catalyt 100.0 3.8E-38 8.2E-43 242.3 18.6 226 2-232 14-262 (265)
184 cd06610 STKc_OSR1_SPAK Catalyt 100.0 4.3E-38 9.2E-43 242.4 18.9 223 3-230 23-267 (267)
185 cd06657 STKc_PAK4 Catalytic do 100.0 4.1E-38 9E-43 245.5 18.8 227 2-237 41-280 (292)
186 cd05049 PTKc_Trk Catalytic dom 100.0 9E-38 1.9E-42 242.3 20.2 217 3-226 32-276 (280)
187 cd05611 STKc_Rim15_like Cataly 100.0 4.5E-38 9.8E-43 241.5 18.3 221 2-233 17-257 (260)
188 cd05052 PTKc_Abl Catalytic dom 100.0 7.4E-38 1.6E-42 240.8 19.5 217 2-226 27-257 (263)
189 cd06626 STKc_MEKK4 Catalytic d 100.0 1.1E-37 2.5E-42 239.7 20.3 224 2-230 21-264 (264)
190 cd06639 STKc_myosinIIIB Cataly 100.0 6.5E-38 1.4E-42 244.5 19.2 221 2-231 43-291 (291)
191 PHA03390 pk1 serine/threonine- 100.0 5.2E-38 1.1E-42 242.0 18.5 216 2-232 37-267 (267)
192 cd05116 PTKc_Syk Catalytic dom 100.0 1.3E-37 2.7E-42 238.7 20.4 217 3-226 19-250 (257)
193 cd06606 STKc_MAPKKK Catalytic 100.0 7.2E-38 1.6E-42 239.9 18.9 223 2-230 21-260 (260)
194 PF07714 Pkinase_Tyr: Protein 100.0 2.3E-38 5.1E-43 242.9 16.2 218 2-226 24-257 (259)
195 cd06646 STKc_MAP4K5 Catalytic 100.0 3E-38 6.5E-43 243.4 16.8 219 2-229 30-267 (267)
196 KOG1095 Protein tyrosine kinas 100.0 2.1E-38 4.5E-43 270.1 17.3 213 7-226 723-956 (1025)
197 cd07845 STKc_CDK10 Catalytic d 100.0 6.1E-38 1.3E-42 246.6 18.8 226 2-234 28-297 (309)
198 KOG0612 Rho-associated, coiled 100.0 3.8E-39 8.1E-44 271.9 12.5 224 1-233 95-344 (1317)
199 cd08225 STKc_Nek5 Catalytic do 100.0 1.1E-37 2.4E-42 238.9 19.6 220 2-230 21-257 (257)
200 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.1E-37 2.4E-42 240.9 19.8 222 2-230 22-272 (272)
201 KOG0983 Mitogen-activated prot 100.0 9.1E-39 2E-43 233.0 12.8 223 2-234 113-356 (391)
202 cd07860 STKc_CDK2_3 Catalytic 100.0 9.6E-38 2.1E-42 242.7 19.2 222 2-230 21-284 (284)
203 cd05096 PTKc_DDR1 Catalytic do 100.0 1.3E-37 2.7E-42 244.3 19.9 219 4-226 44-300 (304)
204 cd06614 STKc_PAK Catalytic dom 100.0 7.2E-38 1.6E-42 243.7 18.3 227 2-237 40-280 (286)
205 cd05122 PKc_STE Catalytic doma 100.0 1E-37 2.2E-42 238.1 18.8 218 2-229 21-253 (253)
206 cd05106 PTKc_CSF-1R Catalytic 100.0 6.6E-38 1.4E-42 252.0 18.6 217 4-226 66-367 (374)
207 KOG0577 Serine/threonine prote 100.0 1.3E-38 2.9E-43 253.6 14.2 220 1-234 46-285 (948)
208 cd05104 PTKc_Kit Catalytic dom 100.0 9.2E-38 2E-42 251.3 19.3 219 3-227 62-370 (375)
209 cd05048 PTKc_Ror Catalytic Dom 100.0 1.5E-37 3.2E-42 241.5 19.8 216 5-227 34-279 (283)
210 KOG0586 Serine/threonine prote 100.0 3.7E-39 8.1E-44 257.4 10.9 223 2-236 77-315 (596)
211 cd08215 STKc_Nek Catalytic dom 100.0 1.6E-37 3.4E-42 237.9 19.5 220 2-230 21-258 (258)
212 cd08219 STKc_Nek3 Catalytic do 100.0 1.1E-37 2.4E-42 238.7 18.5 217 2-227 21-252 (255)
213 cd05115 PTKc_Zap-70 Catalytic 100.0 2.3E-37 4.9E-42 237.3 20.2 218 4-227 20-251 (257)
214 cd06917 STKc_NAK1_like Catalyt 100.0 1E-37 2.3E-42 241.6 18.3 224 2-236 22-264 (277)
215 cd07855 STKc_ERK5 Catalytic do 100.0 5.6E-38 1.2E-42 249.3 17.0 234 2-239 26-306 (334)
216 cd07850 STKc_JNK Catalytic dom 100.0 6.7E-38 1.5E-42 250.6 17.3 220 2-232 37-316 (353)
217 cd06627 STKc_Cdc7_like Catalyt 100.0 2.3E-37 4.9E-42 236.6 19.5 219 2-230 21-254 (254)
218 cd07833 STKc_CDKL Catalytic do 100.0 1E-37 2.2E-42 242.9 17.8 223 2-230 22-288 (288)
219 cd05606 STKc_beta_ARK Catalyti 100.0 1.8E-37 3.9E-42 240.4 18.8 223 2-234 15-262 (278)
220 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3.2E-37 6.8E-42 236.3 19.8 214 5-226 27-253 (256)
221 KOG0607 MAP kinase-interacting 100.0 6.4E-38 1.4E-42 233.1 15.2 234 2-236 99-370 (463)
222 cd08228 STKc_Nek6 Catalytic do 100.0 2.5E-37 5.5E-42 238.2 19.2 220 2-227 23-261 (267)
223 PTZ00266 NIMA-related protein 100.0 1.2E-37 2.5E-42 267.7 19.0 222 2-233 34-301 (1021)
224 cd05093 PTKc_TrkB Catalytic do 100.0 4E-37 8.7E-42 239.7 20.3 217 3-226 32-274 (288)
225 cd07865 STKc_CDK9 Catalytic do 100.0 2.4E-37 5.3E-42 243.2 19.2 226 2-230 33-310 (310)
226 cd06647 STKc_PAK_I Catalytic d 100.0 9.5E-38 2.1E-42 243.7 16.7 222 2-234 40-276 (293)
227 cd05581 STKc_PDK1 Catalytic do 100.0 3.2E-37 6.8E-42 239.1 19.5 224 2-230 22-280 (280)
228 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.9E-37 4.1E-42 241.2 18.3 222 2-230 22-286 (286)
229 cd06638 STKc_myosinIIIA Cataly 100.0 1.8E-37 3.9E-42 241.3 18.2 221 2-230 39-286 (286)
230 cd07843 STKc_CDC2L1 Catalytic 100.0 2.3E-37 5E-42 241.6 18.4 222 2-230 26-293 (293)
231 cd05123 STKc_AGC Catalytic dom 100.0 3.7E-37 8E-42 235.0 19.2 218 2-230 14-250 (250)
232 cd05576 STKc_RPK118_like Catal 100.0 1.2E-37 2.5E-42 236.1 16.2 209 1-230 13-237 (237)
233 cd08530 STKc_CNK2-like Catalyt 100.0 1.1E-36 2.3E-41 233.3 21.7 218 2-230 21-256 (256)
234 cd07849 STKc_ERK1_2_like Catal 100.0 2.2E-37 4.7E-42 246.1 18.6 228 2-235 26-300 (336)
235 cd05082 PTKc_Csk Catalytic dom 100.0 3.9E-37 8.4E-42 235.8 19.3 210 5-226 28-251 (256)
236 cd05054 PTKc_VEGFR Catalytic d 100.0 3.5E-37 7.5E-42 244.7 19.6 219 3-227 34-329 (337)
237 cd07844 STKc_PCTAIRE_like Cata 100.0 2.9E-37 6.2E-42 240.8 18.8 222 2-230 26-291 (291)
238 cd06653 STKc_MEKK3_like_1 Cata 100.0 7.7E-37 1.7E-41 235.2 20.8 222 2-230 23-264 (264)
239 cd05094 PTKc_TrkC Catalytic do 100.0 6.2E-37 1.3E-41 239.0 20.4 216 4-226 33-277 (291)
240 cd06608 STKc_myosinIII_like Ca 100.0 3.2E-37 6.8E-42 238.5 18.6 220 2-230 27-275 (275)
241 cd08226 PK_STRAD_beta Pseudoki 100.0 1.4E-37 3E-42 246.5 17.0 235 2-236 21-317 (328)
242 cd05062 PTKc_IGF-1R Catalytic 100.0 6.6E-37 1.4E-41 237.2 20.1 217 4-227 34-274 (277)
243 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 5.5E-37 1.2E-41 238.3 19.7 219 3-226 30-276 (283)
244 cd06607 STKc_TAO Catalytic dom 100.0 6.8E-37 1.5E-41 240.5 20.3 219 2-234 36-274 (307)
245 cd05085 PTKc_Fer Catalytic dom 100.0 1E-36 2.2E-41 232.7 20.4 216 4-227 17-247 (250)
246 cd07831 STKc_MOK Catalytic dom 100.0 4.1E-37 8.8E-42 238.9 18.5 220 2-230 20-282 (282)
247 cd06617 PKc_MKK3_6 Catalytic d 100.0 3.1E-37 6.7E-42 239.7 17.6 227 2-238 22-272 (283)
248 cd08229 STKc_Nek7 Catalytic do 100.0 8.6E-37 1.9E-41 235.3 19.9 218 2-226 23-260 (267)
249 cd05059 PTKc_Tec_like Catalyti 100.0 5.9E-37 1.3E-41 234.9 18.9 215 5-227 27-254 (256)
250 KOG0584 Serine/threonine prote 100.0 1E-37 2.2E-42 249.7 14.8 206 16-234 81-303 (632)
251 cd07836 STKc_Pho85 Catalytic d 100.0 5.2E-37 1.1E-41 238.5 18.5 222 2-230 21-284 (284)
252 cd05090 PTKc_Ror1 Catalytic do 100.0 1E-36 2.2E-41 236.8 19.9 218 3-227 31-279 (283)
253 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.3E-36 2.7E-41 236.4 20.4 222 2-226 29-278 (284)
254 cd07835 STKc_CDK1_like Catalyt 100.0 6.4E-37 1.4E-41 237.9 18.7 222 2-230 20-283 (283)
255 cd07870 STKc_PFTAIRE2 Catalyti 100.0 8.2E-37 1.8E-41 238.3 19.2 221 2-230 26-291 (291)
256 cd00192 PTKc Catalytic domain 100.0 9.3E-37 2E-41 234.1 19.1 217 4-227 21-260 (262)
257 cd05092 PTKc_TrkA Catalytic do 100.0 1.3E-36 2.8E-41 235.9 19.9 217 3-226 32-276 (280)
258 cd06633 STKc_TAO3 Catalytic do 100.0 1.7E-36 3.8E-41 238.7 20.9 220 2-234 42-280 (313)
259 cd05613 STKc_MSK1_N N-terminal 100.0 9.6E-37 2.1E-41 237.8 19.3 226 3-234 25-275 (290)
260 cd05061 PTKc_InsR Catalytic do 100.0 2.4E-36 5.3E-41 235.3 21.4 222 5-233 35-286 (288)
261 cd05040 PTKc_Ack_like Catalyti 100.0 1.6E-36 3.5E-41 232.5 20.1 216 6-226 23-253 (257)
262 KOG1989 ARK protein kinase fam 100.0 1.5E-37 3.3E-42 257.3 15.0 217 3-227 59-307 (738)
263 cd06616 PKc_MKK4 Catalytic dom 100.0 9.1E-37 2E-41 237.7 18.6 225 2-236 25-276 (288)
264 cd05033 PTKc_EphR Catalytic do 100.0 2.3E-36 5E-41 232.8 20.5 216 5-227 31-261 (266)
265 KOG0603 Ribosomal protein S6 k 100.0 5.8E-38 1.3E-42 251.8 11.9 213 2-230 343-566 (612)
266 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.6E-36 3.4E-41 235.1 19.7 216 5-227 35-274 (277)
267 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.3E-36 2.9E-41 232.9 19.0 214 6-227 28-254 (256)
268 cd05108 PTKc_EGFR Catalytic do 100.0 1.2E-36 2.6E-41 240.0 19.2 214 7-227 37-264 (316)
269 cd05583 STKc_MSK_N N-terminal 100.0 1.2E-36 2.5E-41 237.1 18.8 225 3-233 25-272 (288)
270 KOG2345 Serine/threonine prote 100.0 9.6E-38 2.1E-42 224.3 11.7 224 3-227 43-296 (302)
271 cd05068 PTKc_Frk_like Catalyti 100.0 1.8E-36 4E-41 232.7 19.7 214 5-226 29-256 (261)
272 PTZ00024 cyclin-dependent prot 100.0 1.3E-36 2.9E-41 241.6 19.5 233 2-236 30-322 (335)
273 cd07834 STKc_MAPK Catalytic do 100.0 5.7E-37 1.2E-41 243.2 17.3 229 2-235 21-297 (330)
274 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.7E-36 3.7E-41 235.7 19.4 223 2-227 29-279 (284)
275 cd05118 STKc_CMGC Catalytic do 100.0 1.1E-36 2.5E-41 236.4 18.3 222 2-230 20-283 (283)
276 cd05055 PTKc_PDGFR Catalytic d 100.0 2.7E-36 5.8E-41 236.5 20.5 218 3-226 62-296 (302)
277 PLN00009 cyclin-dependent kina 100.0 9E-37 1.9E-41 238.4 17.7 227 2-235 23-292 (294)
278 cd05091 PTKc_Ror2 Catalytic do 100.0 2.2E-36 4.9E-41 234.9 19.8 217 4-227 33-279 (283)
279 cd05060 PTKc_Syk_like Catalyti 100.0 2.5E-36 5.5E-41 231.4 19.6 215 5-226 22-250 (257)
280 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.6E-36 3.4E-41 233.1 18.3 212 6-226 30-256 (261)
281 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.1E-36 2.4E-41 242.2 18.0 225 2-234 26-298 (337)
282 KOG0193 Serine/threonine prote 100.0 7E-38 1.5E-42 249.7 11.0 214 7-226 415-648 (678)
283 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3.4E-36 7.4E-41 231.9 20.1 218 2-226 23-260 (267)
284 cd06635 STKc_TAO1 Catalytic do 100.0 4.5E-36 9.8E-41 236.7 21.2 222 2-236 46-286 (317)
285 KOG0194 Protein tyrosine kinas 100.0 2.1E-37 4.6E-42 247.3 13.2 210 9-226 189-415 (474)
286 cd07837 STKc_CdkB_plant Cataly 100.0 1.8E-36 3.9E-41 236.7 18.3 223 2-231 22-295 (295)
287 cd05072 PTKc_Lyn Catalytic dom 100.0 3.2E-36 6.8E-41 231.4 19.3 214 5-226 29-256 (261)
288 cd05083 PTKc_Chk Catalytic dom 100.0 3.3E-36 7.1E-41 230.5 19.2 212 3-226 26-249 (254)
289 cd07829 STKc_CDK_like Catalyti 100.0 3.3E-36 7.3E-41 233.7 19.4 222 2-230 20-282 (282)
290 cd05058 PTKc_Met_Ron Catalytic 100.0 6.2E-36 1.3E-40 229.9 20.6 218 5-227 22-255 (262)
291 cd05032 PTKc_InsR_like Catalyt 100.0 4.2E-36 9.1E-41 232.6 19.8 216 4-226 34-273 (277)
292 cd06634 STKc_TAO2 Catalytic do 100.0 4.4E-36 9.5E-41 235.9 20.0 220 2-234 36-274 (308)
293 cd07851 STKc_p38 Catalytic dom 100.0 1.7E-36 3.8E-41 241.5 17.7 224 2-237 36-308 (343)
294 cd05041 PTKc_Fes_like Catalyti 100.0 4.6E-36 1E-40 229.2 19.4 214 6-226 19-247 (251)
295 cd05111 PTK_HER3 Pseudokinase 100.0 5.8E-36 1.3E-40 232.1 20.1 212 8-226 38-263 (279)
296 cd07840 STKc_CDK9_like Catalyt 100.0 2.8E-36 6E-41 234.7 18.2 223 2-230 20-287 (287)
297 cd06618 PKc_MKK7 Catalytic dom 100.0 2.5E-36 5.4E-41 236.1 17.9 227 2-238 36-284 (296)
298 cd07842 STKc_CDK8_like Catalyt 100.0 2.4E-36 5.1E-41 238.3 18.0 222 5-230 26-316 (316)
299 cd05039 PTKc_Csk_like Catalyti 100.0 7.9E-36 1.7E-40 228.6 20.3 210 5-226 28-251 (256)
300 cd05071 PTKc_Src Catalytic dom 100.0 6.5E-36 1.4E-40 229.8 19.8 212 7-226 31-255 (262)
301 cd05065 PTKc_EphR_B Catalytic 100.0 6.8E-36 1.5E-40 230.5 20.0 217 6-226 32-263 (269)
302 cd07866 STKc_BUR1 Catalytic do 100.0 4E-36 8.7E-41 236.4 19.0 228 2-230 29-311 (311)
303 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 4E-36 8.7E-41 237.9 19.0 227 2-240 31-301 (328)
304 cd05053 PTKc_FGFR Catalytic do 100.0 3.1E-36 6.8E-41 235.2 17.9 217 4-227 40-287 (293)
305 cd05105 PTKc_PDGFR_alpha Catal 100.0 5.6E-36 1.2E-40 241.9 19.9 216 5-226 66-392 (400)
306 cd05051 PTKc_DDR Catalytic dom 100.0 6.4E-36 1.4E-40 233.8 19.6 219 4-226 44-292 (296)
307 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 5.9E-36 1.3E-40 229.8 19.0 214 5-226 29-255 (260)
308 cd07880 STKc_p38gamma_MAPK12 C 100.0 4.2E-36 9E-41 239.3 18.6 225 2-238 36-309 (343)
309 KOG4257 Focal adhesion tyrosin 100.0 4E-37 8.6E-42 246.5 12.6 215 4-226 416-644 (974)
310 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.2E-35 2.5E-40 229.1 20.5 214 7-226 34-262 (268)
311 cd05099 PTKc_FGFR4 Catalytic d 100.0 1E-35 2.2E-40 234.4 20.5 215 5-226 43-288 (314)
312 cd05069 PTKc_Yes Catalytic dom 100.0 9E-36 2E-40 228.8 19.6 212 7-226 31-255 (260)
313 cd05098 PTKc_FGFR1 Catalytic d 100.0 7.5E-36 1.6E-40 234.5 19.5 216 5-227 49-295 (307)
314 cd07864 STKc_CDK12 Catalytic d 100.0 5E-36 1.1E-40 235.0 18.5 223 2-230 28-302 (302)
315 cd05101 PTKc_FGFR2 Catalytic d 100.0 1E-35 2.2E-40 233.5 20.2 216 5-227 46-292 (304)
316 cd05066 PTKc_EphR_A Catalytic 100.0 1.1E-35 2.4E-40 229.1 20.0 215 6-226 32-261 (267)
317 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 8.9E-36 1.9E-40 229.0 19.4 207 6-227 32-260 (262)
318 cd07852 STKc_MAPK15 Catalytic 100.0 5.9E-36 1.3E-40 238.0 18.9 230 2-235 28-303 (337)
319 cd05035 PTKc_Axl_like Catalyti 100.0 9.2E-36 2E-40 230.2 19.5 217 4-227 25-268 (273)
320 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.1E-35 2.4E-40 229.9 19.8 208 5-227 43-272 (274)
321 cd05088 PTKc_Tie2 Catalytic do 100.0 5.4E-36 1.2E-40 234.9 18.2 214 4-227 30-276 (303)
322 cd05047 PTKc_Tie Catalytic dom 100.0 7.7E-36 1.7E-40 230.4 18.8 214 3-226 17-263 (270)
323 cd05044 PTKc_c-ros Catalytic d 100.0 7.3E-36 1.6E-40 230.3 18.6 214 6-226 26-265 (269)
324 cd05109 PTKc_HER2 Catalytic do 100.0 1.3E-35 2.9E-40 230.1 20.1 212 8-226 38-263 (279)
325 cd05089 PTKc_Tie1 Catalytic do 100.0 1.5E-35 3.2E-40 231.8 20.1 210 8-227 31-271 (297)
326 cd05112 PTKc_Itk Catalytic dom 100.0 1.2E-35 2.5E-40 227.6 19.2 215 5-227 27-254 (256)
327 cd05045 PTKc_RET Catalytic dom 100.0 1.4E-35 3.1E-40 231.2 19.9 214 6-226 30-281 (290)
328 cd08222 STKc_Nek11 Catalytic d 100.0 1.5E-35 3.3E-40 227.5 19.5 201 20-230 46-260 (260)
329 cd05067 PTKc_Lck_Blk Catalytic 100.0 1E-35 2.2E-40 228.5 18.6 215 4-226 28-255 (260)
330 cd07879 STKc_p38delta_MAPK13 C 100.0 4.6E-36 9.9E-41 239.0 17.2 221 2-235 36-305 (342)
331 cd05075 PTKc_Axl Catalytic dom 100.0 2.1E-35 4.6E-40 228.1 20.4 213 8-227 28-267 (272)
332 cd05050 PTKc_Musk Catalytic do 100.0 1.8E-35 3.9E-40 230.4 20.1 217 3-226 32-284 (288)
333 KOG1187 Serine/threonine prote 100.0 2.7E-36 5.9E-41 238.8 15.6 218 4-227 97-348 (361)
334 cd05056 PTKc_FAK Catalytic dom 100.0 1.8E-35 3.9E-40 228.3 19.9 214 6-227 34-261 (270)
335 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 7.7E-36 1.7E-40 231.9 17.8 221 3-226 30-278 (284)
336 PRK13184 pknD serine/threonine 100.0 7E-36 1.5E-40 255.7 18.9 221 2-225 23-283 (932)
337 KOG4236 Serine/threonine prote 100.0 1.4E-37 3E-42 245.1 7.7 224 1-233 584-825 (888)
338 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.7E-35 3.6E-40 235.8 19.5 219 3-227 34-335 (343)
339 cd07854 STKc_MAPK4_6 Catalytic 100.0 1E-35 2.2E-40 237.1 18.2 225 2-232 26-305 (342)
340 cd05097 PTKc_DDR_like Catalyti 100.0 2.7E-35 5.8E-40 230.2 20.2 217 6-226 44-291 (295)
341 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.3E-35 2.7E-40 236.7 18.6 222 2-235 38-308 (345)
342 cd05034 PTKc_Src_like Catalyti 100.0 2.3E-35 4.9E-40 226.6 19.0 214 5-226 29-256 (261)
343 cd07857 STKc_MPK1 Catalytic do 100.0 2.1E-35 4.5E-40 234.4 19.3 225 6-234 27-299 (332)
344 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 7.4E-36 1.6E-40 229.0 16.0 207 6-227 27-256 (258)
345 smart00219 TyrKc Tyrosine kina 100.0 3E-35 6.6E-40 225.4 19.4 214 5-226 27-256 (258)
346 KOG0662 Cyclin-dependent kinas 100.0 1.4E-35 2.9E-40 204.4 15.5 226 1-233 22-289 (292)
347 PHA03210 serine/threonine kina 100.0 4.1E-36 8.9E-41 249.4 15.4 212 19-236 206-463 (501)
348 smart00220 S_TKc Serine/Threon 100.0 2.6E-35 5.7E-40 223.4 18.5 219 2-230 10-244 (244)
349 cd07830 STKc_MAK_like Catalyti 100.0 3.4E-35 7.5E-40 228.2 19.4 221 2-230 20-283 (283)
350 cd05095 PTKc_DDR2 Catalytic do 100.0 4.4E-35 9.6E-40 229.0 20.1 218 5-226 45-292 (296)
351 cd07838 STKc_CDK4_6_like Catal 100.0 3E-35 6.5E-40 228.9 18.9 221 2-230 20-287 (287)
352 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 5E-35 1.1E-39 225.7 19.8 219 3-226 19-265 (269)
353 cd05107 PTKc_PDGFR_beta Cataly 100.0 4.6E-35 1E-39 236.6 20.4 219 3-227 64-395 (401)
354 KOG0196 Tyrosine kinase, EPH ( 100.0 5.7E-37 1.2E-41 250.5 8.6 214 6-227 657-887 (996)
355 cd05043 PTK_Ryk Pseudokinase d 100.0 5.7E-35 1.2E-39 226.7 19.4 215 5-226 34-271 (280)
356 KOG0669 Cyclin T-dependent kin 100.0 2.3E-36 4.9E-41 218.3 10.5 231 2-235 38-323 (376)
357 cd05100 PTKc_FGFR3 Catalytic d 100.0 8E-35 1.7E-39 231.2 20.1 216 6-228 44-290 (334)
358 cd05110 PTKc_HER4 Catalytic do 100.0 8.3E-35 1.8E-39 228.2 19.5 213 8-227 38-264 (303)
359 cd05073 PTKc_Hck Catalytic dom 100.0 1E-34 2.2E-39 222.9 19.6 214 5-226 29-255 (260)
360 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 8.4E-35 1.8E-39 223.2 18.8 204 7-226 31-256 (259)
361 KOG0696 Serine/threonine prote 100.0 4E-36 8.6E-41 230.8 11.2 220 2-232 370-611 (683)
362 cd05042 PTKc_Aatyk Catalytic d 100.0 1.4E-34 3.1E-39 223.2 19.5 218 5-227 21-266 (269)
363 cd05046 PTK_CCK4 Pseudokinase 100.0 1.2E-34 2.6E-39 224.2 19.1 217 4-227 33-272 (275)
364 KOG0608 Warts/lats-like serine 100.0 3.7E-36 8E-41 241.4 10.7 229 3-233 651-934 (1034)
365 cd05057 PTKc_EGFR_like Catalyt 100.0 2.2E-34 4.9E-39 223.2 20.1 213 7-226 37-263 (279)
366 KOG0671 LAMMER dual specificit 100.0 2.5E-36 5.4E-41 229.0 8.5 223 2-234 110-413 (415)
367 KOG4278 Protein tyrosine kinas 100.0 2.5E-35 5.4E-40 236.5 14.7 215 4-226 290-518 (1157)
368 KOG1094 Discoidin domain recep 100.0 1.7E-35 3.7E-40 235.3 13.4 217 6-226 562-799 (807)
369 KOG1006 Mitogen-activated prot 100.0 6.9E-36 1.5E-40 217.1 10.0 226 1-236 84-336 (361)
370 KOG0614 cGMP-dependent protein 100.0 2.9E-36 6.3E-41 236.3 8.1 214 9-232 448-682 (732)
371 cd08528 STKc_Nek10 Catalytic d 100.0 3.7E-34 8E-39 220.9 19.7 214 5-227 25-266 (269)
372 KOG0199 ACK and related non-re 100.0 1.7E-35 3.7E-40 239.7 12.3 219 6-230 138-371 (1039)
373 cd05086 PTKc_Aatyk2 Catalytic 100.0 7.5E-34 1.6E-38 219.1 20.5 216 6-226 22-264 (268)
374 KOG0670 U4/U6-associated splic 100.0 2.9E-35 6.3E-40 231.3 10.5 222 2-232 453-751 (752)
375 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.4E-33 3.1E-38 218.0 19.9 218 3-227 24-268 (273)
376 cd05610 STKc_MASTL Catalytic d 100.0 4.9E-34 1.1E-38 243.9 18.6 112 2-114 25-152 (669)
377 KOG0665 Jun-N-terminal kinase 100.0 3.3E-35 7.2E-40 218.3 8.6 219 2-231 37-314 (369)
378 KOG4250 TANK binding protein k 100.0 7.7E-35 1.7E-39 236.1 11.3 168 1-175 33-227 (732)
379 KOG0587 Traf2- and Nck-interac 100.0 4.8E-34 1E-38 236.0 13.7 224 2-233 40-288 (953)
380 KOG1027 Serine/threonine prote 100.0 4.7E-35 1E-39 240.8 7.3 220 6-233 533-773 (903)
381 KOG0666 Cyclin C-dependent kin 100.0 3.8E-34 8.2E-39 212.3 10.1 224 7-234 54-344 (438)
382 KOG0695 Serine/threonine prote 100.0 1.1E-33 2.3E-38 212.5 11.8 224 2-232 271-521 (593)
383 KOG1035 eIF-2alpha kinase GCN2 100.0 3.6E-33 7.7E-38 237.6 16.2 184 44-232 669-876 (1351)
384 PLN03225 Serine/threonine-prot 100.0 2.3E-32 5E-37 228.7 16.3 189 41-235 205-458 (566)
385 KOG0200 Fibroblast/platelet-de 100.0 1.5E-31 3.2E-36 225.8 18.7 216 6-226 328-574 (609)
386 PHA02882 putative serine/threo 100.0 1.1E-30 2.4E-35 204.0 18.4 197 27-226 74-291 (294)
387 KOG0668 Casein kinase II, alph 100.0 3.6E-31 7.8E-36 188.9 14.0 224 2-237 59-332 (338)
388 PLN03224 probable serine/threo 100.0 3.6E-30 7.9E-35 210.9 19.6 223 4-232 184-505 (507)
389 KOG1025 Epidermal growth facto 100.0 3.1E-31 6.7E-36 218.3 13.2 213 6-225 725-951 (1177)
390 KOG0664 Nemo-like MAPK-related 100.0 1.8E-32 3.9E-37 200.5 5.3 226 1-233 73-349 (449)
391 KOG1151 Tousled-like protein k 100.0 4.5E-31 9.7E-36 204.8 12.7 233 2-236 484-750 (775)
392 PLN00113 leucine-rich repeat r 100.0 8.8E-31 1.9E-35 233.8 16.3 209 2-227 711-947 (968)
393 KOG1290 Serine/threonine prote 100.0 2.3E-29 4.9E-34 196.7 17.2 98 2-100 99-222 (590)
394 PLN00181 protein SPA1-RELATED; 100.0 3.9E-30 8.5E-35 224.6 14.0 185 43-233 52-271 (793)
395 KOG1167 Serine/threonine prote 100.0 6.1E-30 1.3E-34 196.6 11.3 226 5-234 63-388 (418)
396 KOG0984 Mitogen-activated prot 100.0 3.5E-29 7.6E-34 176.0 12.6 167 1-175 66-255 (282)
397 cd00180 PKc Catalytic domain o 100.0 3.5E-28 7.5E-33 180.4 16.9 184 4-228 16-215 (215)
398 KOG0576 Mitogen-activated prot 100.0 3.5E-30 7.6E-35 207.8 6.2 224 1-233 35-277 (829)
399 KOG3653 Transforming growth fa 100.0 4.8E-28 1E-32 188.7 16.1 211 4-223 231-495 (534)
400 smart00750 KIND kinase non-cat 100.0 5.4E-29 1.2E-33 180.2 10.2 164 56-232 1-170 (176)
401 KOG2052 Activin A type IB rece 100.0 4.6E-28 1E-32 187.5 14.5 215 5-224 233-496 (513)
402 KOG1024 Receptor-like protein 100.0 2.9E-28 6.2E-33 186.3 11.1 203 17-226 328-550 (563)
403 KOG1152 Signal transduction se 100.0 3E-28 6.4E-33 194.1 9.0 165 1-174 581-771 (772)
404 smart00221 STYKc Protein kinas 99.9 6.5E-25 1.4E-29 164.6 16.2 167 3-174 21-202 (225)
405 KOG1345 Serine/threonine kinas 99.9 2.4E-26 5.2E-31 168.1 7.5 218 2-230 45-290 (378)
406 KOG0590 Checkpoint kinase and 99.9 2.4E-26 5.3E-31 192.2 3.4 208 23-234 368-592 (601)
407 KOG1165 Casein kinase (serine/ 99.9 7E-22 1.5E-26 148.6 13.6 175 3-178 50-242 (449)
408 KOG1240 Protein kinase contain 99.9 3.7E-23 7.9E-28 175.9 7.1 212 5-227 45-291 (1431)
409 KOG0603 Ribosomal protein S6 k 99.9 7.3E-23 1.6E-27 165.3 5.2 210 4-234 20-250 (612)
410 KOG1163 Casein kinase (serine/ 99.9 1.1E-21 2.3E-26 141.7 9.4 174 2-176 36-225 (341)
411 PF14531 Kinase-like: Kinase-l 99.9 3.4E-21 7.4E-26 146.2 11.2 199 2-218 33-288 (288)
412 COG0515 SPS1 Serine/threonine 99.9 7.7E-20 1.7E-24 144.7 18.4 229 7-235 23-283 (384)
413 KOG1164 Casein kinase (serine/ 99.8 1E-19 2.2E-24 143.6 15.9 220 6-226 44-292 (322)
414 PRK09188 serine/threonine prot 99.8 1.1E-20 2.5E-25 149.2 10.1 140 5-146 43-194 (365)
415 KOG0606 Microtubule-associated 99.8 5.5E-21 1.2E-25 162.3 8.7 174 56-233 136-321 (1205)
416 KOG4158 BRPK/PTEN-induced prot 99.8 5.2E-20 1.1E-24 141.9 12.3 177 42-223 314-506 (598)
417 KOG1033 eIF-2alpha kinase PEK/ 99.8 3.2E-21 7E-26 153.1 5.7 182 43-230 328-515 (516)
418 KOG0195 Integrin-linked kinase 99.8 1.8E-20 3.9E-25 137.8 7.0 207 6-225 213-440 (448)
419 KOG1023 Natriuretic peptide re 99.8 2.4E-19 5.2E-24 144.6 10.6 193 30-226 1-219 (484)
420 PRK10359 lipopolysaccharide co 99.8 7.5E-20 1.6E-24 135.0 6.9 138 5-166 53-216 (232)
421 PRK12274 serine/threonine prot 99.8 1.9E-18 4.1E-23 125.1 8.5 168 5-174 24-209 (218)
422 cd05147 RIO1_euk RIO kinase fa 99.8 1.9E-18 4.1E-23 125.9 6.6 110 5-116 20-167 (190)
423 cd05145 RIO1_like RIO kinase f 99.7 2.9E-17 6.2E-22 120.1 8.4 109 5-116 20-167 (190)
424 KOG0590 Checkpoint kinase and 99.6 2.8E-17 6E-22 138.2 1.3 210 20-232 64-291 (601)
425 KOG1166 Mitotic checkpoint ser 99.6 5.4E-16 1.2E-20 133.8 8.1 159 5-170 721-901 (974)
426 PRK10345 hypothetical protein; 99.6 2.8E-15 6E-20 110.4 9.9 109 2-113 21-156 (210)
427 smart00090 RIO RIO-like kinase 99.6 2.8E-15 6.1E-20 112.9 7.4 113 2-116 50-198 (237)
428 TIGR03724 arch_bud32 Kae1-asso 99.6 1.1E-14 2.5E-19 107.3 9.3 108 5-115 16-138 (199)
429 PRK01723 3-deoxy-D-manno-octul 99.6 3.4E-14 7.3E-19 107.2 10.0 108 6-115 55-191 (239)
430 PRK14879 serine/threonine prot 99.5 4.5E-14 9.7E-19 105.1 9.2 109 5-115 18-143 (211)
431 cd05144 RIO2_C RIO kinase fami 99.5 2.1E-14 4.6E-19 105.7 7.3 110 4-116 37-175 (198)
432 COG3642 Mn2+-dependent serine/ 99.4 6.6E-13 1.4E-17 93.3 8.9 91 20-115 43-140 (204)
433 PRK09605 bifunctional UGMP fam 99.4 1.5E-13 3.2E-18 115.8 6.0 92 20-115 380-476 (535)
434 KOG1266 Protein kinase [Signal 99.4 1E-12 2.2E-17 99.7 8.6 194 30-232 121-336 (458)
435 KOG0601 Cyclin-dependent kinas 99.4 3.9E-13 8.4E-18 109.2 6.3 223 3-231 140-383 (524)
436 KOG1243 Protein kinase [Genera 99.4 3.9E-12 8.5E-17 104.8 11.4 156 3-169 34-200 (690)
437 KOG0606 Microtubule-associated 99.4 4.8E-13 1E-17 114.8 6.3 196 42-239 875-1104(1205)
438 TIGR01982 UbiB 2-polyprenylphe 99.4 5.9E-12 1.3E-16 103.0 12.0 78 41-118 228-309 (437)
439 KOG2137 Protein kinase [Signal 99.4 2.9E-13 6.4E-18 111.7 2.6 157 79-235 112-273 (700)
440 cd05119 RIO RIO kinase family, 99.3 3.8E-12 8.2E-17 92.9 7.5 90 25-116 66-164 (187)
441 KOG3087 Serine/threonine prote 99.3 2.4E-11 5.2E-16 85.3 8.5 113 4-116 28-166 (229)
442 cd05151 ChoK Choline Kinase (C 99.3 9.4E-12 2E-16 89.3 6.8 104 5-114 20-135 (170)
443 PRK04750 ubiB putative ubiquin 99.3 2.5E-11 5.5E-16 100.8 10.1 77 41-118 231-316 (537)
444 cd05120 APH_ChoK_like Aminogly 99.3 5.7E-12 1.2E-16 88.4 4.6 107 6-114 21-137 (155)
445 cd05146 RIO3_euk RIO kinase fa 99.2 1.4E-10 3E-15 84.1 7.5 89 25-116 75-174 (197)
446 PF01163 RIO1: RIO1 family; I 99.2 1.5E-10 3.1E-15 83.7 7.5 95 21-116 53-156 (188)
447 PRK15123 lipopolysaccharide co 99.1 1.3E-09 2.8E-14 83.4 10.2 110 5-114 44-193 (268)
448 COG4248 Uncharacterized protei 99.0 3.4E-09 7.5E-14 83.7 9.7 174 45-225 84-294 (637)
449 KOG0601 Cyclin-dependent kinas 98.9 1.9E-09 4.2E-14 88.1 5.9 212 4-231 289-518 (524)
450 PF06176 WaaY: Lipopolysacchar 98.9 1.6E-08 3.5E-13 74.0 9.2 67 42-114 114-182 (229)
451 KOG3741 Poly(A) ribonuclease s 98.9 9.7E-08 2.1E-12 77.4 13.7 192 3-227 298-521 (655)
452 PF06293 Kdo: Lipopolysacchari 98.9 1.6E-08 3.5E-13 74.8 8.8 94 20-114 55-169 (206)
453 cd05154 ACAD10_11_like Acyl-Co 98.6 9.7E-08 2.1E-12 71.4 5.5 55 6-60 22-89 (223)
454 COG0478 RIO-like serine/threon 98.6 2.1E-07 4.5E-12 69.9 7.0 92 20-114 153-250 (304)
455 COG0661 AarF Predicted unusual 98.5 2.4E-07 5.3E-12 76.9 6.2 95 23-118 208-317 (517)
456 PRK09902 hypothetical protein; 98.4 1.2E-06 2.6E-11 64.1 7.6 108 7-114 42-178 (216)
457 KOG1035 eIF-2alpha kinase GCN2 98.2 9.1E-06 2E-10 72.2 9.0 200 19-239 225-446 (1351)
458 KOG1235 Predicted unusual prot 98.1 1.3E-05 2.8E-10 66.8 7.9 77 41-118 272-357 (538)
459 COG2112 Predicted Ser/Thr prot 98.1 1.3E-05 2.9E-10 56.6 6.5 105 5-114 44-154 (201)
460 TIGR02172 Fb_sc_TIGR02172 Fibr 98.1 2.9E-05 6.2E-10 58.3 8.7 108 6-114 22-181 (226)
461 COG1718 RIO1 Serine/threonine 98.0 2E-05 4.4E-10 58.8 6.7 93 24-117 116-217 (268)
462 cd05150 APH Aminoglycoside 3'- 97.8 8.2E-05 1.8E-09 56.6 7.0 54 6-60 22-81 (244)
463 cd05155 APH_ChoK_like_1 Unchar 97.7 0.00049 1.1E-08 52.0 9.9 30 85-114 164-193 (235)
464 cd05153 HomoserineK_II Homoser 97.7 0.00014 3.1E-09 57.0 6.9 30 85-114 175-204 (296)
465 PF10707 YrbL-PhoP_reg: PhoP r 97.7 0.00048 1E-08 50.4 8.8 89 19-109 54-165 (199)
466 TIGR02721 ycfN_thiK thiamine k 97.6 0.00023 4.9E-09 54.6 7.3 108 5-115 18-175 (256)
467 TIGR00938 thrB_alt homoserine 97.6 0.00053 1.1E-08 54.1 9.1 31 84-114 186-216 (307)
468 PF01636 APH: Phosphotransfera 97.6 0.00028 6E-09 53.1 7.1 54 7-60 21-84 (239)
469 KOG2268 Serine/threonine prote 97.6 0.00014 3.1E-09 56.6 4.9 90 23-116 157-252 (465)
470 cd05156 ChoK_euk Choline Kinas 97.5 0.00038 8.2E-09 54.8 6.8 30 85-114 179-212 (302)
471 KOG1826 Ras GTPase activating 97.5 6.4E-05 1.4E-09 69.2 2.3 204 20-232 1273-1497(2724)
472 KOG0576 Mitogen-activated prot 97.4 1.9E-05 4.1E-10 66.2 -1.6 187 22-232 279-489 (829)
473 PF12260 PIP49_C: Protein-kina 97.3 0.008 1.7E-07 43.8 11.0 92 24-116 7-112 (188)
474 KOG1093 Predicted protein kina 97.2 0.0024 5.2E-08 53.0 7.9 160 21-233 27-200 (725)
475 KOG2270 Serine/threonine prote 97.0 0.002 4.4E-08 51.3 5.9 88 24-114 214-312 (520)
476 cd05152 MPH2' Macrolide 2'-Pho 96.9 0.0062 1.4E-07 47.3 8.2 30 5-34 34-63 (276)
477 PRK06148 hypothetical protein; 96.8 0.011 2.4E-07 54.3 9.9 31 85-115 203-236 (1013)
478 COG2334 Putative homoserine ki 96.5 0.013 2.8E-07 46.5 7.2 28 87-114 199-227 (331)
479 COG3001 Uncharacterized protei 96.5 0.039 8.4E-07 41.3 8.8 52 7-59 40-99 (286)
480 PRK05231 homoserine kinase; Pr 96.1 0.004 8.7E-08 49.4 2.6 30 85-114 187-216 (319)
481 PRK10271 thiK thiamine kinase; 96.1 0.0045 9.8E-08 44.7 2.5 29 86-115 78-106 (188)
482 cd05157 ETNK_euk Ethanolamine 96.1 0.0037 8E-08 47.2 2.2 30 85-114 170-200 (235)
483 PRK10593 hypothetical protein; 96.0 0.054 1.2E-06 42.6 8.5 51 8-58 39-100 (297)
484 PF03881 Fructosamin_kin: Fruc 95.9 0.033 7.1E-07 43.5 6.8 52 4-56 38-97 (288)
485 PLN02876 acyl-CoA dehydrogenas 95.8 0.083 1.8E-06 47.7 9.8 32 85-116 225-258 (822)
486 PF01633 Choline_kinase: Choli 95.7 0.0054 1.2E-07 45.5 1.7 30 85-114 143-173 (211)
487 KOG1236 Predicted unusual prot 95.7 0.061 1.3E-06 43.8 7.3 61 42-102 316-381 (565)
488 COG0510 ycfN Thiamine kinase a 95.6 0.0089 1.9E-07 46.1 2.3 31 85-115 153-183 (269)
489 TIGR02906 spore_CotS spore coa 95.0 0.017 3.6E-07 45.7 2.3 29 85-114 187-215 (313)
490 COG5072 ALK1 Serine/threonine 94.8 0.029 6.3E-07 44.9 3.2 74 35-115 289-370 (488)
491 TIGR02904 spore_ysxE spore coa 94.8 0.013 2.8E-07 46.3 1.3 30 85-114 196-225 (309)
492 PF07387 Seadorna_VP7: Seadorn 94.5 0.12 2.6E-06 38.6 5.5 81 21-113 103-190 (308)
493 PLN02236 choline kinase 94.4 0.026 5.7E-07 45.3 2.2 31 85-115 200-231 (344)
494 smart00587 CHK ZnF_C4 abd HLH 94.3 0.029 6.3E-07 41.2 2.0 31 84-114 119-154 (196)
495 PLN02421 phosphotransferase, a 93.9 0.042 9.1E-07 43.9 2.4 29 87-115 184-213 (330)
496 COG3173 Predicted aminoglycosi 93.5 0.057 1.2E-06 42.6 2.3 32 85-116 198-229 (321)
497 PF05445 Pox_ser-thr_kin: Poxv 93.0 0.14 3E-06 40.8 3.7 46 71-116 274-347 (434)
498 PHA03111 Ser/Thr kinase; Provi 92.9 0.12 2.5E-06 41.0 3.2 32 70-101 277-318 (444)
499 PRK11768 serine/threonine prot 92.6 0.064 1.4E-06 42.8 1.5 28 85-114 196-223 (325)
500 TIGR01767 MTRK 5-methylthiorib 92.4 0.09 1.9E-06 42.3 2.1 31 83-114 190-220 (370)
No 1
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-53 Score=320.97 Aligned_cols=227 Identities=32% Similarity=0.500 Sum_probs=198.3
Q ss_pred CCCCCCcEEEEEecc---chHHHHHHHHHHHHHhhcCCCcccc-----cCCc-eeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 1 MNKGTGALFVVKSAE---SEAGVQALRNEAEIRQSLNSPNIGR-----NGEK-TVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~---~~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~-~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
+|+.|++.+|+|++. .+...+++.+|+++++..+|||||. ..++ .++++||||++|+|.+++... +++++
T Consensus 99 ~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~-g~i~E 177 (364)
T KOG0581|consen 99 RHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRV-GRIPE 177 (364)
T ss_pred EEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhc-CCCCH
Confidence 478899999999985 4566788999999999999999998 4445 699999999999999999974 67888
Q ss_pred HHHHHHHHHH------hh-cCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 72 GVIRLYTKEI------LH-GNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 72 ~~~~~~~~~~------Lh-~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
.....++.++ || +.+|+||||||+|||+++.|.+||+|||.+....+. ....+.||..|||||.+
T Consensus 178 ~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--------~a~tfvGT~~YMsPERi 249 (364)
T KOG0581|consen 178 PVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--------IANTFVGTSAYMSPERI 249 (364)
T ss_pred HHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh--------hcccccccccccChhhh
Confidence 8777777654 68 599999999999999999999999999999877652 33567799999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccc--hhchHHHHHHHHhcCCCCCCChh-hHHHHHHHHHHhhccCCCCCCCh
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDK--ISNAAATLLKIACSNEKPHFPTQ-FFKKVLDFLAKCLERKPEKRWSA 221 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~~p~~Rps~ 221 (241)
.+..|+.++||||||++++|+.+|+.||... +.....+++.......+|..|.. .++++++|+..||++||.+|||+
T Consensus 250 ~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~ 329 (364)
T KOG0581|consen 250 SGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSA 329 (364)
T ss_pred cCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCH
Confidence 9999999999999999999999999999763 34456677777777788888887 99999999999999999999999
Q ss_pred HHHhcCCCCCCCCcc
Q 042809 222 EELLNHTFISGNAKK 236 (241)
Q Consensus 222 ~~~l~~p~~~~~~~~ 236 (241)
.++++|||++.....
T Consensus 330 ~qLl~Hpfi~~~~~~ 344 (364)
T KOG0581|consen 330 KQLLQHPFIKKFEDP 344 (364)
T ss_pred HHHhcCHHHhhcccc
Confidence 999999999876654
No 2
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.7e-54 Score=328.29 Aligned_cols=225 Identities=30% Similarity=0.482 Sum_probs=185.2
Q ss_pred CCCCCcEEEEEeccchH---------HHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCC
Q 042809 2 NKGTGALFVVKSAESEA---------GVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGG 67 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~---------~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~ 67 (241)
+++||+.||||.+.+.. ......+|+++|++|.|||||+ +..+..|+||||++||+|.+++.. .+
T Consensus 193 e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~-nk 271 (475)
T KOG0615|consen 193 EKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVA-NK 271 (475)
T ss_pred EcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHh-cc
Confidence 57899999999988432 1122469999999999999998 677888999999999999999987 46
Q ss_pred CCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecC---CCeeecCCCcchhhcccccCCccccccccccCcccc
Q 042809 68 TLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSH---GDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLW 138 (241)
Q Consensus 68 ~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (241)
.+.+...+.++.|+ ||++||+||||||+|||++.+ ..+||+|||+++..++ ..-....|||+.|
T Consensus 272 ~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~-------~sfm~TlCGTpsY 344 (475)
T KOG0615|consen 272 YLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGE-------GSFMKTLCGTPSY 344 (475)
T ss_pred ccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhcccc-------ceehhhhcCCccc
Confidence 67777767666655 799999999999999999877 5699999999998765 2334578899999
Q ss_pred cCcccccccCC--C-chhhHHHHHHHHHHHHhCCCCCccchhch-HHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccC
Q 042809 139 MAPEVLRNEGL--D-FATDIWSLGCMVIEMATGRPPWGDKISNA-AATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERK 214 (241)
Q Consensus 139 ~aPE~~~~~~~--~-~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 214 (241)
.|||++.+..+ + .+.|+||+||++|-+++|.+||.+..... ..+.+........+.....++++..+||.+||..|
T Consensus 345 vAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~Vd 424 (475)
T KOG0615|consen 345 VAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVD 424 (475)
T ss_pred cChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeC
Confidence 99999976443 3 47899999999999999999998876555 44444433334444556778899999999999999
Q ss_pred CCCCCChHHHhcCCCCCCCC
Q 042809 215 PEKRWSAEELLNHTFISGNA 234 (241)
Q Consensus 215 p~~Rps~~~~l~~p~~~~~~ 234 (241)
|++|||++++|+||||+...
T Consensus 425 P~~R~s~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 425 PENRPSADEALNHPWFKDAP 444 (475)
T ss_pred cccCcCHHHHhcChhhhccc
Confidence 99999999999999999665
No 3
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-50 Score=322.65 Aligned_cols=221 Identities=32% Similarity=0.543 Sum_probs=195.7
Q ss_pred CCCCCcEEEEEeccc-----hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAES-----EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
|..+|..||+|++.+ ....+.+.+|+++.+.|.|||||. ++..++|+|+|+|..++|..+++. ..++++
T Consensus 39 ~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~Kr-rk~ltE 117 (592)
T KOG0575|consen 39 DLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLKR-RKPLTE 117 (592)
T ss_pred EcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCCccHHHHHHh-cCCCCc
Confidence 568999999999774 456788999999999999999999 899999999999999999999994 789999
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..++.++.|| ||+++|+|||||..|+|++.+..+||+|||+|....... ......||||.|+|||++.
T Consensus 118 pEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~------Erk~TlCGTPNYIAPEVl~ 191 (592)
T KOG0575|consen 118 PEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG------ERKKTLCGTPNYIAPEVLN 191 (592)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcc------cccceecCCCcccChhHhc
Confidence 9999999988 699999999999999999999999999999999876521 2345678999999999999
Q ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHh
Q 042809 146 NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225 (241)
Q Consensus 146 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l 225 (241)
...++..+||||+||++|.|++|++||....-......++ ...+.+|...+.++.+||.++|+.+|.+|||++++|
T Consensus 192 k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik----~~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL 267 (592)
T KOG0575|consen 192 KSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIK----LNEYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVL 267 (592)
T ss_pred cCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHH----hcCcccccccCHHHHHHHHHHhcCCcccCCCHHHHh
Confidence 9999999999999999999999999998764444433333 455677888999999999999999999999999999
Q ss_pred cCCCCCCC
Q 042809 226 NHTFISGN 233 (241)
Q Consensus 226 ~~p~~~~~ 233 (241)
.|+||+..
T Consensus 268 ~h~Ff~~g 275 (592)
T KOG0575|consen 268 DHPFFKSG 275 (592)
T ss_pred cCHhhhCC
Confidence 99999443
No 4
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-49 Score=310.06 Aligned_cols=229 Identities=29% Similarity=0.551 Sum_probs=193.6
Q ss_pred CCCCCCcEEEEEeccchHHH-----HHHHHHHHHHhhc-CCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCC
Q 042809 1 MNKGTGALFVVKSAESEAGV-----QALRNEAEIRQSL-NSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~~~~~~-----~~~~~e~~~l~~l-~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~ 69 (241)
+++++++.||||++.++-.. +.+..|-..|.+| .||.|++ +++..+|+|+||+++|+|.++|... +.+
T Consensus 93 ~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~-Gsf 171 (604)
T KOG0592|consen 93 REKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKY-GSF 171 (604)
T ss_pred eecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHh-Ccc
Confidence 47889999999998865433 3467899999999 6999999 8899999999999999999999985 789
Q ss_pred CHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccC-----Cc--cccccccccCcc
Q 042809 70 DAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN-----GN--LKQSWQSIGGTQ 136 (241)
Q Consensus 70 ~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~-----~~--~~~~~~~~~~~~ 136 (241)
++...+.++.++ ||++|||||||||+|||++.++.++|+|||.+..+.+.... .. .......+.||.
T Consensus 172 de~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTA 251 (604)
T KOG0592|consen 172 DETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTA 251 (604)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeee
Confidence 999999998866 79999999999999999999999999999999977553322 11 111125688999
Q ss_pred cccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCC
Q 042809 137 LWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPE 216 (241)
Q Consensus 137 ~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 216 (241)
.|.+||.+.+...++.+|+|+|||++|.|+.|++||.+..+--.. +........++...++.+++||+++|..||.
T Consensus 252 eYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliF----qkI~~l~y~fp~~fp~~a~dLv~KLLv~dp~ 327 (604)
T KOG0592|consen 252 EYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIF----QKIQALDYEFPEGFPEDARDLIKKLLVRDPS 327 (604)
T ss_pred cccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHH----HHHHHhcccCCCCCCHHHHHHHHHHHccCcc
Confidence 999999999999999999999999999999999999875332222 2222455677888889999999999999999
Q ss_pred CCCChHHHhcCCCCCCCC
Q 042809 217 KRWSAEELLNHTFISGNA 234 (241)
Q Consensus 217 ~Rps~~~~l~~p~~~~~~ 234 (241)
+|+|+.+|.+||||.+-.
T Consensus 328 ~Rlt~~qIk~HpFF~~Vd 345 (604)
T KOG0592|consen 328 DRLTSQQIKAHPFFEGVD 345 (604)
T ss_pred ccccHHHHhhCcccccCC
Confidence 999999999999997654
No 5
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-48 Score=293.99 Aligned_cols=222 Identities=31% Similarity=0.527 Sum_probs=187.1
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
+++|++.||+|++++. ...+...+|..+|.+++||.||. ++...+|+|+||+.||.|+..|+. .+.+++
T Consensus 46 k~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~-eg~F~E 124 (357)
T KOG0598|consen 46 KKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQR-EGRFSE 124 (357)
T ss_pred EcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCCccHHHHHHh-cCCcch
Confidence 4689999999998854 34566899999999999999998 899999999999999999999997 578899
Q ss_pred HHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..++.++.+ +||++||+||||||+|||+|.+|.++|+|||+++...... .....++||+.|+|||++.
T Consensus 125 ~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~------~~t~tfcGT~eYmAPEil~ 198 (357)
T KOG0598|consen 125 DRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG------DATRTFCGTPEYMAPEILL 198 (357)
T ss_pred hHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCC------CccccccCCccccChHHHh
Confidence 988887764 4899999999999999999999999999999998543321 2223478999999999999
Q ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC----Ch
Q 042809 146 NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW----SA 221 (241)
Q Consensus 146 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp----s~ 221 (241)
+..|+..+|.||||+++|+|++|.+||.+....... ........+..+.-.+.+.+++++++|..+|++|. .+
T Consensus 199 ~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~---~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~ 275 (357)
T KOG0598|consen 199 GKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMY---DKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDA 275 (357)
T ss_pred cCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHH---HHHhcCcCCCCCccCCHHHHHHHHHHhccCHHHhcCCCCCh
Confidence 999999999999999999999999999875433322 22222223444555888999999999999999996 79
Q ss_pred HHHhcCCCCCCC
Q 042809 222 EELLNHTFISGN 233 (241)
Q Consensus 222 ~~~l~~p~~~~~ 233 (241)
+++-+||||+.-
T Consensus 276 ~~ik~HpfF~~i 287 (357)
T KOG0598|consen 276 EEIKRHPFFKGI 287 (357)
T ss_pred HHhhcCcccccC
Confidence 999999999764
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-48 Score=294.13 Aligned_cols=227 Identities=30% Similarity=0.538 Sum_probs=193.2
Q ss_pred CCCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 1 MNKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++++++..||||.+.+. ...+.+..|+++|+.++|||||. ..++.+|+|||||+||+|.+|++.. +.+++
T Consensus 30 ~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~-~~l~e 108 (429)
T KOG0595|consen 30 RHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRR-GRLPE 108 (429)
T ss_pred EeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHc-CCCCH
Confidence 36788999999998854 35677899999999999999998 7788999999999999999999984 68999
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecC------CCeeecCCCcchhhcccccCCccccccccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSH------GDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWM 139 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (241)
+.++.+.+|+ ||+++||||||||.|||++.+ -.+||+|||+++...+ .......+|++.||
T Consensus 109 ~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~-------~~~a~tlcGSplYM 181 (429)
T KOG0595|consen 109 ATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQP-------GSMAETLCGSPLYM 181 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCc-------hhHHHHhhCCcccc
Confidence 9999888765 899999999999999999875 3489999999987654 23345678999999
Q ss_pred CcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC
Q 042809 140 APEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219 (241)
Q Consensus 140 aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 219 (241)
|||++....|+.++|+||+|+++|++++|+.||...+........+. .....+..+...+..+.+++...+..+|.+|.
T Consensus 182 APEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k-~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~ 260 (429)
T KOG0595|consen 182 APEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKK-GNEIVPVLPAELSNPLRELLISLLQRNPKDRI 260 (429)
T ss_pred CHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc-cccccCchhhhccCchhhhhhHHHhcCccccC
Confidence 99999999999999999999999999999999988766665553332 22344455666777788999999999999999
Q ss_pred ChHHHhcCCCCCCCCcc
Q 042809 220 SAEELLNHTFISGNAKK 236 (241)
Q Consensus 220 s~~~~l~~p~~~~~~~~ 236 (241)
+..+-..|+++.....+
T Consensus 261 ~~~~~~~~~~l~~~p~~ 277 (429)
T KOG0595|consen 261 SFEDFFDHPFLAANPQD 277 (429)
T ss_pred chHHhhhhhhcccCccc
Confidence 99999999999877654
No 7
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-47 Score=292.58 Aligned_cols=230 Identities=47% Similarity=0.777 Sum_probs=189.3
Q ss_pred CCCCCcEEEEEeccch--HHHHHHHHHHHHHhhcCCCcccccC------C-ceeeeeecccCCCCHHHHHHHhCCCCCHH
Q 042809 2 NKGTGALFVVKSAESE--AGVQALRNEAEIRQSLNSPNIGRNG------E-KTVNIFMEYMAGGSLLDVAEKFGGTLDAG 72 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~------~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 72 (241)
++++|..+|||.+... ...+.+.+|+.+|++++|||||+.. . ..++++|||+++|+|.+++...++.+++.
T Consensus 38 ~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~ 117 (313)
T KOG0198|consen 38 NKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEP 117 (313)
T ss_pred ecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHH
Confidence 4566899999987743 1256799999999999999999822 2 26999999999999999999976689999
Q ss_pred HHHHHHHHH------hhcCCccccCCCCCcEEeec-CCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 73 VIRLYTKEI------LHGNGILHCDLKCNNVLLGS-HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 73 ~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
.++.++.|+ ||++|++|+||||+|||++. ++.+||+|||.+..... ............||+.|+|||++.
T Consensus 118 ~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~---~~~~~~~~~~~~Gtp~~maPEvi~ 194 (313)
T KOG0198|consen 118 LVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLES---KGTKSDSELSVQGTPNYMAPEVIR 194 (313)
T ss_pred HHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccc---ccccccccccccCCccccCchhhc
Confidence 999999877 69999999999999999999 79999999999976543 111122233466999999999998
Q ss_pred cc-CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHH
Q 042809 146 NE-GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224 (241)
Q Consensus 146 ~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 224 (241)
.+ ...+.+|||||||++.||+||..||... ................|.+|..++.+.++|+.+|+..+|.+|||++++
T Consensus 195 ~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eL 273 (313)
T KOG0198|consen 195 NGEVARRESDIWSLGCTVVEMLTGKPPWSEF-FEEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEEL 273 (313)
T ss_pred CCCcCCccchhhhcCCEEEeccCCCCcchhh-cchHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHH
Confidence 53 3446999999999999999999999874 233344445554556678899999999999999999999999999999
Q ss_pred hcCCCCCCCCc
Q 042809 225 LNHTFISGNAK 235 (241)
Q Consensus 225 l~~p~~~~~~~ 235 (241)
|.|||.+....
T Consensus 274 L~hpf~~~~~~ 284 (313)
T KOG0198|consen 274 LEHPFLKQNSI 284 (313)
T ss_pred hhChhhhcccc
Confidence 99999977554
No 8
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-47 Score=307.29 Aligned_cols=225 Identities=27% Similarity=0.463 Sum_probs=192.3
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
|-.||+.+|||++.+. .....+.+|+-+|+.+.||||+. ++..++|+|.||++||.|++++.. .+++.+
T Consensus 33 h~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~-kG~l~e 111 (786)
T KOG0588|consen 33 HAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVR-KGPLPE 111 (786)
T ss_pred cccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCCchhHHHHHh-hCCCCC
Confidence 5679999999998854 34566899999999999999988 788899999999999999999998 466777
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++.|| +|..+++||||||+|++++..+.+||+|||+|....+ .......||++.|++||++.
T Consensus 112 ~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~-------gklLeTSCGSPHYA~PEIV~ 184 (786)
T KOG0588|consen 112 REAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVP-------GKLLETSCGSPHYAAPEIVS 184 (786)
T ss_pred HHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccC-------CccccccCCCcccCCchhhc
Confidence 7777777766 6999999999999999999999999999999975433 23445678999999999999
Q ss_pred ccCCC-chhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHH
Q 042809 146 NEGLD-FATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224 (241)
Q Consensus 146 ~~~~~-~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 224 (241)
|.+|. .++||||+|+++|.|+||.+||.+. +...++... .....++|..++.++++|+.+|+..||..|+|++++
T Consensus 185 G~pYdG~~sDVWSCGVILfALLtG~LPFdDd---Nir~LLlKV-~~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI 260 (786)
T KOG0588|consen 185 GRPYDGRPSDVWSCGVILFALLTGKLPFDDD---NIRVLLLKV-QRGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEI 260 (786)
T ss_pred CCCCCCCccccchhHHHHHHHHhCCCCCCCc---cHHHHHHHH-HcCcccCCCcCCHHHHHHHHHHhccCccccccHHHH
Confidence 99985 7899999999999999999999853 333333332 356678889999999999999999999999999999
Q ss_pred hcCCCCCCCCccCC
Q 042809 225 LNHTFISGNAKKNS 238 (241)
Q Consensus 225 l~~p~~~~~~~~~~ 238 (241)
+.|||+.+....++
T Consensus 261 ~kHP~l~g~~~~~~ 274 (786)
T KOG0588|consen 261 LKHPFLSGYTSLPS 274 (786)
T ss_pred hhCchhhcCCCCCh
Confidence 99999988766443
No 9
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-47 Score=299.68 Aligned_cols=220 Identities=28% Similarity=0.464 Sum_probs=188.2
Q ss_pred CCCCCcEEEEEeccch-------HHHHHHHHHHHHHhhcC-CCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCC
Q 042809 2 NKGTGALFVVKSAESE-------AGVQALRNEAEIRQSLN-SPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGT 68 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-------~~~~~~~~e~~~l~~l~-h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~ 68 (241)
+..+|..||+|.+..+ ...+.+.+|+.++++++ ||||++ .....+|+||||+.||+|.+++.. .++
T Consensus 38 ~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~-~g~ 116 (370)
T KOG0583|consen 38 HRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVN-KGR 116 (370)
T ss_pred eccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHH-cCC
Confidence 5678899999977653 23456778999999999 999998 666779999999999999999999 788
Q ss_pred CCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecC-CCeeecCCCcchhhcccccCCccccccccccCcccccCc
Q 042809 69 LDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSH-GDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141 (241)
Q Consensus 69 ~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aP 141 (241)
+.+..++.+++|+ ||++|++||||||+||+++.+ +.+||+|||++.... .........+|++.|+||
T Consensus 117 l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~------~~~~~l~t~cGsp~Y~aP 190 (370)
T KOG0583|consen 117 LKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP------GEDGLLKTFCGSPAYAAP 190 (370)
T ss_pred CChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccC------CCCCcccCCCCCcccCCH
Confidence 9999999999877 799999999999999999999 999999999998663 112344667899999999
Q ss_pred ccccccC-CC-chhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhh-HHHHHHHHHHhhccCCCCC
Q 042809 142 EVLRNEG-LD-FATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQF-FKKVLDFLAKCLERKPEKR 218 (241)
Q Consensus 142 E~~~~~~-~~-~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~l~~~p~~R 218 (241)
|++.+.. |+ .++||||+|++||-|++|..||.+......... .......+|..+ +.++.+|+.+||..+|.+|
T Consensus 191 Evl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~k----i~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R 266 (370)
T KOG0583|consen 191 EVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRK----IRKGEFKIPSYLLSPEARSLIEKMLVPDPSTR 266 (370)
T ss_pred HHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHH----HhcCCccCCCCcCCHHHHHHHHHHcCCCcccC
Confidence 9999877 75 889999999999999999999987433332222 335556677777 9999999999999999999
Q ss_pred CChHHHhcCCCCCC
Q 042809 219 WSAEELLNHTFISG 232 (241)
Q Consensus 219 ps~~~~l~~p~~~~ 232 (241)
+|+.++++||||+.
T Consensus 267 ~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 267 ITLLEILEHPWFQK 280 (370)
T ss_pred CCHHHHhhChhhcc
Confidence 99999999999997
No 10
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-47 Score=273.12 Aligned_cols=226 Identities=30% Similarity=0.455 Sum_probs=192.5
Q ss_pred CCCCCCcEEEEEecc----chHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 1 MNKGTGALFVVKSAE----SEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~----~~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++..||+.+|+|.++ +....+.+.+|++|-+.|+||||++ ...+..|+|+|+|.|++|..-+-.+ ..+++
T Consensus 31 ~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R-~~ySE 109 (355)
T KOG0033|consen 31 VHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-EFYSE 109 (355)
T ss_pred HhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccchHHHHHHHHH-HHHHH
Confidence 367788889998866 3346788999999999999999998 6778899999999999998877653 56788
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCC---CeeecCCCcchhhcccccCCccccccccccCcccccCcc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHG---DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPE 142 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE 142 (241)
..+-++++|+ +|.+||||||+||+|+++.+.. .+||+|||++..... ........|+|.|+|||
T Consensus 110 a~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~-------g~~~~G~~GtP~fmaPE 182 (355)
T KOG0033|consen 110 ADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND-------GEAWHGFAGTPGYLSPE 182 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCC-------ccccccccCCCcccCHH
Confidence 8888888887 4999999999999999996653 499999999986653 23344567999999999
Q ss_pred cccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChH
Q 042809 143 VLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAE 222 (241)
Q Consensus 143 ~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 222 (241)
++...+|+..+|||+.|+++|-++.|.+||.+.+.....+.+.......+++....++++.++|+++||..||.+|+|+.
T Consensus 183 vvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~ 262 (355)
T KOG0033|consen 183 VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITAD 262 (355)
T ss_pred HhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHH
Confidence 99999999999999999999999999999999777776666665555555556677889999999999999999999999
Q ss_pred HHhcCCCCCCCC
Q 042809 223 ELLNHTFISGNA 234 (241)
Q Consensus 223 ~~l~~p~~~~~~ 234 (241)
|+|.|||+.+..
T Consensus 263 EAL~HpWi~~r~ 274 (355)
T KOG0033|consen 263 EALKHPWICNRE 274 (355)
T ss_pred HHhCCchhcchH
Confidence 999999998753
No 11
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=3.8e-46 Score=274.71 Aligned_cols=225 Identities=27% Similarity=0.510 Sum_probs=182.1
Q ss_pred CCCCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 1 MNKGTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
+++.||++||||.+.. +...+-..+|+++|++++|+|+|. .....+++|+|||++ ++-+-+......++.
T Consensus 22 rnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dh-TvL~eLe~~p~G~~~ 100 (396)
T KOG0593|consen 22 RNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDH-TVLHELERYPNGVPS 100 (396)
T ss_pred ccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecch-HHHHHHHhccCCCCH
Confidence 5899999999999763 234556789999999999999988 678899999999987 666777776778888
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++.|+ +|+++++||||||+||+++.+|.+||||||.|...... .........|+.|+|||.+.
T Consensus 101 ~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p------gd~YTDYVATRWYRaPELLv 174 (396)
T KOG0593|consen 101 ELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAP------GDNYTDYVATRWYRAPELLV 174 (396)
T ss_pred HHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCC------cchhhhhhhhhhccChhhhc
Confidence 8888888876 59999999999999999999999999999999877631 12223345689999999998
Q ss_pred c-cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCC---------------CC------------h
Q 042809 146 N-EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPH---------------FP------------T 197 (241)
Q Consensus 146 ~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------~~------------~ 197 (241)
| ..|...+||||+||++.||++|++-|.+..+-+..-.+........++ +| +
T Consensus 175 GDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p 254 (396)
T KOG0593|consen 175 GDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYP 254 (396)
T ss_pred ccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcc
Confidence 8 779999999999999999999999998765554444433333222210 00 2
Q ss_pred hhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCC
Q 042809 198 QFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISG 232 (241)
Q Consensus 198 ~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~ 232 (241)
..+.-+.+|+++||..||.+|+|.++++.||||.+
T Consensus 255 ~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 255 KISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG 289 (396)
T ss_pred cchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence 23456899999999999999999999999999954
No 12
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-46 Score=294.85 Aligned_cols=222 Identities=35% Similarity=0.560 Sum_probs=183.8
Q ss_pred CCCCCcEEEEEeccc--hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHH
Q 042809 2 NKGTGALFVVKSAES--EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI 74 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~--~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 74 (241)
+..+++.||||.+.. ....+.+.+|+.+|+..+|+|||. ...+.+|+||||++||+|.+.+.. ..+++..+
T Consensus 294 ~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~--~~~~E~qI 371 (550)
T KOG0578|consen 294 KISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTK--TRMTEGQI 371 (550)
T ss_pred eccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchhhhhhc--ccccHHHH
Confidence 457889999999773 334566899999999999999998 566899999999999999999986 45788887
Q ss_pred HHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccC
Q 042809 75 RLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEG 148 (241)
Q Consensus 75 ~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~ 148 (241)
..+++ ++||.+|++|||||.+||+++.+|.+||+|||++..+..... ......||+.|+|||++....
T Consensus 372 A~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~------KR~TmVGTPYWMAPEVvtrk~ 445 (550)
T KOG0578|consen 372 AAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS------KRSTMVGTPYWMAPEVVTRKP 445 (550)
T ss_pred HHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccC------ccccccCCCCccchhhhhhcc
Confidence 77766 447999999999999999999999999999999987655222 334567999999999999999
Q ss_pred CCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhc-CCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcC
Q 042809 149 LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACS-NEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227 (241)
Q Consensus 149 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 227 (241)
|+++.||||||++++||+.|++||-... ....+...... ......+..++..+++|+.+||..|+.+|+|+.++|+|
T Consensus 446 YG~KVDIWSLGIMaIEMveGEPPYlnE~--PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 446 YGPKVDIWSLGIMAIEMVEGEPPYLNEN--PLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred cCccccchhhhhHHHHHhcCCCCccCCC--hHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 9999999999999999999999998632 22222222222 22234467789999999999999999999999999999
Q ss_pred CCCCCC
Q 042809 228 TFISGN 233 (241)
Q Consensus 228 p~~~~~ 233 (241)
|||+.+
T Consensus 524 pFl~~a 529 (550)
T KOG0578|consen 524 PFLKMA 529 (550)
T ss_pred hhhhhc
Confidence 999543
No 13
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-46 Score=272.05 Aligned_cols=219 Identities=30% Similarity=0.546 Sum_probs=189.3
Q ss_pred CCCCCCcEEEEEeccchHH-----HHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 1 MNKGTGALFVVKSAESEAG-----VQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~~~~~-----~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
+++.+|..||+|++.+... .+-..+|..+|+.+.||.+++ .+.+.+|+||||++||.|+++++. .++++
T Consensus 64 r~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk-~~rF~ 142 (355)
T KOG0616|consen 64 REKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRK-SGRFS 142 (355)
T ss_pred EEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHh-cCCCC
Confidence 3578899999999986643 344789999999999999998 678899999999999999999998 57889
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+..+++++.|+ ||++++++|||||+||++|.+|.+||+|||.++.... .....||||.|+|||++
T Consensus 143 e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~---------rT~TlCGTPeYLAPEii 213 (355)
T KOG0616|consen 143 EPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG---------RTWTLCGTPEYLAPEII 213 (355)
T ss_pred chhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecC---------cEEEecCCccccChHHh
Confidence 99988887755 7999999999999999999999999999999986544 24678899999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC-----
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW----- 219 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp----- 219 (241)
...++..++|.||||+++|||+.|.+||.+... .. + ..........+|.-.+.++++|++.+|+.|-.+|.
T Consensus 214 ~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~--~~-i-Y~KI~~~~v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlkn 289 (355)
T KOG0616|consen 214 QSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP--IQ-I-YEKILEGKVKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKN 289 (355)
T ss_pred hcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh--HH-H-HHHHHhCcccCCcccCHHHHHHHHHHHhhhhHhhhcCcCC
Confidence 999999999999999999999999999987543 22 2 22223456678888999999999999999999994
Q ss_pred ChHHHhcCCCCCCC
Q 042809 220 SAEELLNHTFISGN 233 (241)
Q Consensus 220 s~~~~l~~p~~~~~ 233 (241)
...++..||||+..
T Consensus 290 G~~dIk~H~wF~~v 303 (355)
T KOG0616|consen 290 GVEDIKNHPWFKGV 303 (355)
T ss_pred CccccccCcccccc
Confidence 67799999999854
No 14
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.9e-45 Score=289.10 Aligned_cols=231 Identities=28% Similarity=0.488 Sum_probs=189.5
Q ss_pred CCCCCcEEEEEeccchH-----HHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESEA-----GVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
.+.||.++|+|++++.. ..+-+..|-.+|....+|.||+ ++..++||||||++||++.++|.. ...+++
T Consensus 162 Kk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~-~~~L~e 240 (550)
T KOG0605|consen 162 KKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMR-KDTLTE 240 (550)
T ss_pred EccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHh-cCcCch
Confidence 47899999999988543 3455789999999999999999 899999999999999999999997 578999
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhccccc------------------CCccc-
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN------------------NGNLK- 126 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~------------------~~~~~- 126 (241)
..+++++.+. ||+.|++||||||+|+|+|..|.+||+|||++........ .....
T Consensus 241 ~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (550)
T KOG0605|consen 241 DWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPK 320 (550)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccc
Confidence 9998887754 7999999999999999999999999999999964321000 00000
Q ss_pred ----------------------cccccccCcccccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHH
Q 042809 127 ----------------------QSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLL 184 (241)
Q Consensus 127 ----------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~ 184 (241)
.-.....|||-|+|||++.+..|+..+|.|||||++|||+.|.+||...+.......+
T Consensus 321 ~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI 400 (550)
T KOG0605|consen 321 FNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKI 400 (550)
T ss_pred cccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 0112456999999999999999999999999999999999999999887766665555
Q ss_pred HHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC---ChHHHhcCCCCCCCC
Q 042809 185 KIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW---SAEELLNHTFISGNA 234 (241)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~~l~~p~~~~~~ 234 (241)
.........+-....+.++++||.+|+. ||.+|. +++||..||||++..
T Consensus 401 ~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~ 452 (550)
T KOG0605|consen 401 VNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVD 452 (550)
T ss_pred HHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCC
Confidence 5444334343344566899999999999 999998 699999999998753
No 15
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-45 Score=282.20 Aligned_cols=228 Identities=32% Similarity=0.558 Sum_probs=183.8
Q ss_pred CCCCcEEEEEecc---chHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHh-CCCCCHHH
Q 042809 3 KGTGALFVVKSAE---SEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF-GGTLDAGV 73 (241)
Q Consensus 3 ~~~~~~vaiK~~~---~~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~ 73 (241)
+.++.+||||++. ++...+.+++|+..|+.+.||||+. ..+..+|+||.||.+|++.+.++.. ...+++..
T Consensus 48 ~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~ 127 (516)
T KOG0582|consen 48 IPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEAS 127 (516)
T ss_pred cccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHH
Confidence 4678999999987 3445788999999999999999998 7888999999999999999999874 44588888
Q ss_pred HHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc--
Q 042809 74 IRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR-- 145 (241)
Q Consensus 74 ~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-- 145 (241)
+..+++ .|||.+|.+|||||+.|||++.+|.+||+|||.+....... .+. ...+..+.|++.|+|||.+.
T Consensus 128 Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G-~R~-~~rf~tfvgtp~wmAPEvl~q~ 205 (516)
T KOG0582|consen 128 IATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG-DRQ-VTRFNTFVGTPCWMAPEVLMQQ 205 (516)
T ss_pred HHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccC-cee-eEeeccccCcccccChHHhhhc
Confidence 777766 55899999999999999999999999999999887665532 111 12225678999999999964
Q ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCC---------CCChhhHHHHHHHHHHhhccCCC
Q 042809 146 NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP---------HFPTQFFKKVLDFLAKCLERKPE 216 (241)
Q Consensus 146 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~ 216 (241)
...|+.++||||||++..|+.+|..||.....-. .+-....+.++ +.....+..++.++..||.+||.
T Consensus 206 ~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmk---vLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~ 282 (516)
T KOG0582|consen 206 LHGYDFKADIWSFGITACELAHGHAPFSKYPPMK---VLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPS 282 (516)
T ss_pred ccCccchhhhhhhhHHHHHHhcCCCCcccCChHH---HHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcc
Confidence 3568999999999999999999999998753322 22222223333 22244567899999999999999
Q ss_pred CCCChHHHhcCCCCCCCCc
Q 042809 217 KRWSAEELLNHTFISGNAK 235 (241)
Q Consensus 217 ~Rps~~~~l~~p~~~~~~~ 235 (241)
+|||+++++.|+||+....
T Consensus 283 kRptAskLlkh~FFk~~k~ 301 (516)
T KOG0582|consen 283 KRPTASKLLKHAFFKKAKS 301 (516)
T ss_pred cCCCHHHHhccHHHhhccc
Confidence 9999999999999987654
No 16
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2.8e-45 Score=289.96 Aligned_cols=223 Identities=32% Similarity=0.532 Sum_probs=189.2
Q ss_pred CCCCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 1 MNKGTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
+.|.|.++||+|.+.+ +...+.+.+|+++++.++||||+. +...++|+|+||+.| +|+.++.. .+.+++
T Consensus 22 rrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g-~L~~il~~-d~~lpE 99 (808)
T KOG0597|consen 22 RRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG-DLFTILEQ-DGKLPE 99 (808)
T ss_pred ccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh-hHHHHHHh-ccCCCH
Confidence 4688999999999874 345677999999999999999998 888999999999976 99999997 577888
Q ss_pred HHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
+.+..++. ++||+.+|.|||+||.||+++..|.+|++|||+++.....+ .......|||.|+|||.+.
T Consensus 100 e~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t------~vltsikGtPlYmAPElv~ 173 (808)
T KOG0597|consen 100 EQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT------SVLTSIKGTPLYMAPELVE 173 (808)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCc------eeeeeccCcccccCHHHHc
Confidence 88777765 45899999999999999999999999999999998765521 2223456999999999999
Q ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHh
Q 042809 146 NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225 (241)
Q Consensus 146 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l 225 (241)
+.+|+..+|+||+||++||+++|++||... ....+.+... ..+...|...+..+.+|++.+|.+||.+|.|+.+++
T Consensus 174 e~pyd~~sDlWslGcilYE~~~G~PPF~a~---si~~Lv~~I~-~d~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll 249 (808)
T KOG0597|consen 174 EQPYDHTSDLWSLGCILYELYVGQPPFYAR---SITQLVKSIL-KDPVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLL 249 (808)
T ss_pred CCCccchhhHHHHHHHHHHHhcCCCCchHH---HHHHHHHHHh-cCCCCCcccccHHHHHHHHHHhhcChhhcccHHHHh
Confidence 999999999999999999999999999764 3333333322 344455668889999999999999999999999999
Q ss_pred cCCCCCCCCc
Q 042809 226 NHTFISGNAK 235 (241)
Q Consensus 226 ~~p~~~~~~~ 235 (241)
.|||+++...
T Consensus 250 ~HpF~k~~~~ 259 (808)
T KOG0597|consen 250 GHPFWKGKIN 259 (808)
T ss_pred cChHHhhhhh
Confidence 9999987654
No 17
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.1e-45 Score=267.45 Aligned_cols=211 Identities=27% Similarity=0.478 Sum_probs=178.1
Q ss_pred CCCCCcEEEEEecc----chHHHHHHHHHHHHHhhcCCCcccc-------cCCceeeeeecccCCCCHHHHHHHh---CC
Q 042809 2 NKGTGALFVVKSAE----SEAGVQALRNEAEIRQSLNSPNIGR-------NGEKTVNIFMEYMAGGSLLDVAEKF---GG 67 (241)
Q Consensus 2 ~~~~~~~vaiK~~~----~~~~~~~~~~e~~~l~~l~h~~i~~-------~~~~~~~lv~e~~~~~~L~~~l~~~---~~ 67 (241)
+..+|+.+|.|.+. .....+.+..|+.+|++|+|||||+ ++..-+++|||||++|+|+..++.. +.
T Consensus 40 ~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr 119 (375)
T KOG0591|consen 40 CLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKR 119 (375)
T ss_pred eccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccc
Confidence 56789999999877 3456778999999999999999998 4445599999999999999988653 56
Q ss_pred CCCHHHHHHHHHHH------hhc--CC--ccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCccc
Q 042809 68 TLDAGVIRLYTKEI------LHG--NG--ILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL 137 (241)
Q Consensus 68 ~~~~~~~~~~~~~~------Lh~--~~--~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (241)
.+++..++.++.|+ +|+ .. +.||||||.||+++.+|.+||+|||+++.+.... ....+..|||.
T Consensus 120 ~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~------tfA~S~VGTPy 193 (375)
T KOG0591|consen 120 LIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKT------TFAHSLVGTPY 193 (375)
T ss_pred cCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchh------HHHHhhcCCCc
Confidence 78999999888877 487 44 8999999999999999999999999998765421 12235679999
Q ss_pred ccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCC-hhhHHHHHHHHHHhhccCCC
Q 042809 138 WMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP-TQFFKKVLDFLAKCLERKPE 216 (241)
Q Consensus 138 ~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~ 216 (241)
|++||.+.+.+|++++||||+||++|||+.-+.||.+. +...+-+....+..++.| ..++.++..||..|+..||.
T Consensus 194 YMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~---n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~ 270 (375)
T KOG0591|consen 194 YMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD---NLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPE 270 (375)
T ss_pred ccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc---cHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcc
Confidence 99999999999999999999999999999999999885 445555555556666677 67899999999999999999
Q ss_pred CCCCh
Q 042809 217 KRWSA 221 (241)
Q Consensus 217 ~Rps~ 221 (241)
.||+.
T Consensus 271 ~RP~t 275 (375)
T KOG0591|consen 271 QRPDT 275 (375)
T ss_pred cCCCc
Confidence 99985
No 18
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.4e-45 Score=267.37 Aligned_cols=227 Identities=26% Similarity=0.385 Sum_probs=183.3
Q ss_pred CCCCCCcEEEEEeccc----------hHHHHHHHHHHHHHhhcC-CCcccc-----cCCceeeeeecccCCCCHHHHHHH
Q 042809 1 MNKGTGALFVVKSAES----------EAGVQALRNEAEIRQSLN-SPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEK 64 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~~----------~~~~~~~~~e~~~l~~l~-h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~ 64 (241)
+++.||+.+|+|++.. ....+.-.+|+.||+++. ||||+. +.+..+++|+|.|+.|.|++++.+
T Consensus 37 i~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts 116 (411)
T KOG0599|consen 37 IHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTS 116 (411)
T ss_pred hhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhh
Confidence 3688999999998661 133455689999999996 999988 677889999999999999999998
Q ss_pred hCCCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccc
Q 042809 65 FGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLW 138 (241)
Q Consensus 65 ~~~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (241)
.-.+++...+.+.+|+ ||.++||||||||+||+++.+.+++|+|||.++...+ .......||||+|
T Consensus 117 -~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~-------GekLrelCGTPgY 188 (411)
T KOG0599|consen 117 -KVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEP-------GEKLRELCGTPGY 188 (411)
T ss_pred -heeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCC-------chhHHHhcCCCcc
Confidence 4667787777777755 7999999999999999999999999999999998766 3345567899999
Q ss_pred cCcccccc------cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhc
Q 042809 139 MAPEVLRN------EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLE 212 (241)
Q Consensus 139 ~aPE~~~~------~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 212 (241)
+|||.+.. ..|+...|+|++|+++|.++.|.+||.-...-.+...+.........+...+.+..+.+||.+||+
T Consensus 189 LAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLq 268 (411)
T KOG0599|consen 189 LAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQ 268 (411)
T ss_pred cChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHe
Confidence 99999864 457789999999999999999999997643322222222221222223345677899999999999
Q ss_pred cCCCCCCChHHHhcCCCCCCCCc
Q 042809 213 RKPEKRWSAEELLNHTFISGNAK 235 (241)
Q Consensus 213 ~~p~~Rps~~~~l~~p~~~~~~~ 235 (241)
.||.+|.|++++|+||||.+-+.
T Consensus 269 Vdp~~Ritake~LaHpff~q~~~ 291 (411)
T KOG0599|consen 269 VDPTKRITAKEALAHPFFIQIAQ 291 (411)
T ss_pred eCchhcccHHHHhcChHHHHHHH
Confidence 99999999999999999954433
No 19
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-44 Score=282.35 Aligned_cols=228 Identities=25% Similarity=0.406 Sum_probs=188.6
Q ss_pred CCCCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCcccc-------cCCceeeeeecccCCCCHHHHHHHhCCCC
Q 042809 1 MNKGTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGR-------NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~-------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~ 69 (241)
+|..||++||+|.++- +.......+|+.+|++|.||||++ ...+.+|+|+|||++ +|.-++...+-.+
T Consensus 137 r~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdh-DL~GLl~~p~vkf 215 (560)
T KOG0600|consen 137 RDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDH-DLSGLLSSPGVKF 215 (560)
T ss_pred eecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccc-hhhhhhcCCCccc
Confidence 4789999999999773 334567899999999999999988 335799999999987 9999999877889
Q ss_pred CHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccc
Q 042809 70 DAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEV 143 (241)
Q Consensus 70 ~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~ 143 (241)
++..++.+..|+ ||++|+.|||||.+|||+|.+|.+||+|||+|.......... .....-|+.|+|||.
T Consensus 216 t~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~-----~T~rVvTLWYRpPEL 290 (560)
T KOG0600|consen 216 TEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAP-----YTSRVVTLWYRPPEL 290 (560)
T ss_pred ChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCcc-----cccceEEeeccChHH
Confidence 999999999887 599999999999999999999999999999998554422211 233446889999999
Q ss_pred ccc-cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCC-------------------------h
Q 042809 144 LRN-EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP-------------------------T 197 (241)
Q Consensus 144 ~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~ 197 (241)
+.| ..|+.+.|+||+||++.||++|++.|.+.++..-.+.+...+......+. .
T Consensus 291 LLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~ 370 (560)
T KOG0600|consen 291 LLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFK 370 (560)
T ss_pred hcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhc
Confidence 988 55899999999999999999999999998877666666655543322211 1
Q ss_pred hhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCC
Q 042809 198 QFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNA 234 (241)
Q Consensus 198 ~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~ 234 (241)
..+....+|+..+|..||.+|.|+.++|+++||....
T Consensus 371 ~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p 407 (560)
T KOG0600|consen 371 DFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEP 407 (560)
T ss_pred cCCHHHHHHHHHHhccCccccccHHHHhcCcccccCC
Confidence 2345789999999999999999999999999995443
No 20
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=7e-44 Score=280.24 Aligned_cols=213 Identities=31% Similarity=0.466 Sum_probs=178.2
Q ss_pred CcE-EEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-----cCCc-eeeeeecccCCCCHHHHHHH-hCCCCCHHH
Q 042809 6 GAL-FVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-----NGEK-TVNIFMEYMAGGSLLDVAEK-FGGTLDAGV 73 (241)
Q Consensus 6 ~~~-vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~-~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~ 73 (241)
|.. ||+|.+... ...+.|.+|+.+|.+++|||||. .... .+++||||+++|+|..++.. ....++...
T Consensus 64 g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~ 143 (362)
T KOG0192|consen 64 GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKV 143 (362)
T ss_pred CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHH
Confidence 555 999998732 22678999999999999999998 2232 69999999999999999988 467888888
Q ss_pred HHHHHHH------HhhcCC-ccccCCCCCcEEeecCC-CeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 74 IRLYTKE------ILHGNG-ILHCDLKCNNVLLGSHG-DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 74 ~~~~~~~------~Lh~~~-~vH~dl~p~Nil~~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
+..++.+ |||+++ +|||||||+|||++.++ ++||+|||++....... .......||+.|+|||++.
T Consensus 144 ~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~------~~~~~~~GT~~wMAPEv~~ 217 (362)
T KOG0192|consen 144 RLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK------TSMTSVAGTYRWMAPEVLR 217 (362)
T ss_pred HHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc------ccccCCCCCccccChhhhc
Confidence 8877775 489999 99999999999999998 99999999997544311 1222356999999999999
Q ss_pred --ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHH
Q 042809 146 --NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEE 223 (241)
Q Consensus 146 --~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ 223 (241)
...|+.++||||||+++||++||..||.+... ............++.++...++.+..++.+||..+|..||++.+
T Consensus 218 ~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~--~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~e 295 (362)
T KOG0192|consen 218 GEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP--VQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLE 295 (362)
T ss_pred CCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHH
Confidence 56899999999999999999999999988644 33344444567788888889999999999999999999999999
Q ss_pred Hhc
Q 042809 224 LLN 226 (241)
Q Consensus 224 ~l~ 226 (241)
++.
T Consensus 296 i~~ 298 (362)
T KOG0192|consen 296 IVS 298 (362)
T ss_pred HHH
Confidence 874
No 21
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=7.1e-44 Score=277.96 Aligned_cols=218 Identities=28% Similarity=0.476 Sum_probs=178.5
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+|+.||+|.+... ...+.+.+|+.++++++||||++ .++...++||||+.+++|.+++.. ...+++
T Consensus 22 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~ 100 (291)
T cd05612 22 DRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRN-SGRFSN 100 (291)
T ss_pred EcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHH-cCCCCH
Confidence 4678999999998643 23456889999999999999988 567889999999999999999987 356777
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++.|+ ||++|++||||+|+||+++.+|.++|+|||++...... .....|++.|+|||.+.
T Consensus 101 ~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~---------~~~~~gt~~y~aPE~~~ 171 (291)
T cd05612 101 STGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR---------TWTLCGTPEYLAPEVIQ 171 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC---------cccccCChhhcCHHHHc
Confidence 7766665544 79999999999999999999999999999998754321 12345899999999999
Q ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCC-----
Q 042809 146 NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWS----- 220 (241)
Q Consensus 146 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----- 220 (241)
+..++.++||||||+++|+|++|..||............. .....++...+..+.+++++||+.||.+||+
T Consensus 172 ~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~----~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~ 247 (291)
T cd05612 172 SKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKIL----AGKLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNG 247 (291)
T ss_pred CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH----hCCcCCCccCCHHHHHHHHHHcCCCHHHccCCccCC
Confidence 8889999999999999999999999997754333222221 2334556667889999999999999999995
Q ss_pred hHHHhcCCCCCCC
Q 042809 221 AEELLNHTFISGN 233 (241)
Q Consensus 221 ~~~~l~~p~~~~~ 233 (241)
+++++.||||+..
T Consensus 248 ~~~~l~h~~~~~~ 260 (291)
T cd05612 248 ADDVKNHRWFKSV 260 (291)
T ss_pred HHHHhcCccccCC
Confidence 9999999999753
No 22
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=3.8e-44 Score=283.29 Aligned_cols=220 Identities=27% Similarity=0.465 Sum_probs=180.3
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+|+.||+|.+... .....+.+|+.++++++||||++ ...+..|+||||+.+++|.+++.. ...+++
T Consensus 16 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~ 94 (323)
T cd05571 16 EKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSE 94 (323)
T ss_pred ECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHH-cCCCCH
Confidence 5678999999998743 23456788999999999999987 677889999999999999999987 456777
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++.|+ ||+.|++||||||+||+++.++.+||+|||++...... ........|++.|+|||.+.
T Consensus 95 ~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~------~~~~~~~~gt~~y~aPE~~~ 168 (323)
T cd05571 95 DRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD------GATMKTFCGTPEYLAPEVLE 168 (323)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC------CCcccceecCccccChhhhc
Confidence 7777666554 79999999999999999999999999999998642211 11123456899999999999
Q ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC-----C
Q 042809 146 NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW-----S 220 (241)
Q Consensus 146 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s 220 (241)
+..++.++|+||+||++|+|++|..||............. .....++..++.++.+++++||..+|.+|| +
T Consensus 169 ~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~----~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~ 244 (323)
T cd05571 169 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL----MEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPED 244 (323)
T ss_pred CCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHH----cCCCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCC
Confidence 9889999999999999999999999997654433322222 233456677888999999999999999999 8
Q ss_pred hHHHhcCCCCCC
Q 042809 221 AEELLNHTFISG 232 (241)
Q Consensus 221 ~~~~l~~p~~~~ 232 (241)
+.++++||||+.
T Consensus 245 ~~~ll~h~~f~~ 256 (323)
T cd05571 245 AKEIMEHRFFAS 256 (323)
T ss_pred HHHHHcCCCcCC
Confidence 999999999976
No 23
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-44 Score=269.85 Aligned_cols=232 Identities=26% Similarity=0.378 Sum_probs=183.0
Q ss_pred CCCCCCcEEEEEecc----chHHHHHHHHHHHHHhhcCCCcccc----------cCCceeeeeecccCCCCHHHHHHHhC
Q 042809 1 MNKGTGALFVVKSAE----SEAGVQALRNEAEIRQSLNSPNIGR----------NGEKTVNIFMEYMAGGSLLDVAEKFG 66 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~----~~~~~~~~~~e~~~l~~l~h~~i~~----------~~~~~~~lv~e~~~~~~L~~~l~~~~ 66 (241)
+|+.||+.||||.+. +....++..+|+++|+.++|+||+. ..-..+|+|+|+| +.+|...++. +
T Consensus 42 ~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elM-etDL~~iik~-~ 119 (359)
T KOG0660|consen 42 KDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELM-ETDLHQIIKS-Q 119 (359)
T ss_pred EEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHH-hhHHHHHHHc-C
Confidence 378899999999866 5567788999999999999999976 3456899999999 4799999997 4
Q ss_pred CCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccC
Q 042809 67 GTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMA 140 (241)
Q Consensus 67 ~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 140 (241)
..++...+..+..|+ +|+.+++||||||+|++++.++.+||+|||+|...... .. .........|..|.|
T Consensus 120 ~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~-~~---~~~mTeYVaTRWYRA 195 (359)
T KOG0660|consen 120 QDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKF-FE---DGFMTEYVATRWYRA 195 (359)
T ss_pred ccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeecccc-Cc---ccchhcceeeeeecC
Confidence 559999999999988 49999999999999999999999999999999877543 11 112233446889999
Q ss_pred ccccc-ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHh----------------------cCCCCCCC-
Q 042809 141 PEVLR-NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIAC----------------------SNEKPHFP- 196 (241)
Q Consensus 141 PE~~~-~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~----------------------~~~~~~~~- 196 (241)
||++. ...|+.+.||||+||++.||++|++-|.+.+...-..++.... ....+..+
T Consensus 196 PElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f 275 (359)
T KOG0660|consen 196 PELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPF 275 (359)
T ss_pred HHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCH
Confidence 99985 4678999999999999999999999997643322222111111 11111111
Q ss_pred ----hhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCccCC
Q 042809 197 ----TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNS 238 (241)
Q Consensus 197 ----~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~~~~ 238 (241)
+..++.+.+|+.+||.+||.+|+|++++|+|||+..-..-+.
T Consensus 276 ~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~d 321 (359)
T KOG0660|consen 276 SSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPED 321 (359)
T ss_pred HHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCcc
Confidence 245578999999999999999999999999999987665433
No 24
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-44 Score=290.59 Aligned_cols=219 Identities=29% Similarity=0.502 Sum_probs=188.3
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcC-CCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLN-SPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~-h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
.+.|++.+|||++++. +..+....|.+++.... ||.++. ++..++|.||||+.||++..+.+. ..++
T Consensus 389 ~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~~~~--~~F~ 466 (694)
T KOG0694|consen 389 LKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHHIHT--DVFS 466 (694)
T ss_pred EcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecCCCcEEEEEec--cccc
Confidence 3678999999998853 45677889999988876 999988 899999999999999996555553 6789
Q ss_pred HHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+..++.|+. |+||++||++||||.+||++|.+|.+||+|||+++..- ........++|||.|+|||++
T Consensus 467 e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m------~~g~~TsTfCGTpey~aPEil 540 (694)
T KOG0694|consen 467 EPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM------GQGDRTSTFCGTPEFLAPEVL 540 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccC------CCCCccccccCChhhcChhhh
Confidence 999888765 66899999999999999999999999999999997422 122345678999999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC-C---
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW-S--- 220 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-s--- 220 (241)
.+..|+.++|.|||||++|+|+.|+.||.+.+++.....+. ...+.+|..++.+..++++++|.++|.+|. +
T Consensus 541 ~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~----~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~ 616 (694)
T KOG0694|consen 541 TEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIV----NDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGSGER 616 (694)
T ss_pred ccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHh----cCCCCCCCcccHHHHHHHHHHhccCcccccCCCCC
Confidence 99999999999999999999999999999876655544443 566778899999999999999999999999 3
Q ss_pred -hHHHhcCCCCCC
Q 042809 221 -AEELLNHTFISG 232 (241)
Q Consensus 221 -~~~~l~~p~~~~ 232 (241)
++++..||||+.
T Consensus 617 d~~~i~~hpFFr~ 629 (694)
T KOG0694|consen 617 DAEDIKKHPFFRS 629 (694)
T ss_pred CchhhhhCCcccc
Confidence 689999999975
No 25
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=9.6e-44 Score=276.46 Aligned_cols=227 Identities=25% Similarity=0.429 Sum_probs=181.6
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC-CCCC
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG-GTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~ 70 (241)
++.+|+.||+|.+... .....+.+|+.++.++.|+||+. ..++..++|+||+++|+|.+++.... ..++
T Consensus 21 ~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~ 100 (285)
T cd05631 21 VRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFD 100 (285)
T ss_pred EecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCC
Confidence 4678999999987643 22345778999999999999987 56778999999999999998886543 3577
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+..+..++.|+ ||+.|++||||||+||+++.++.++|+|||++...... .......|+..|+|||.+
T Consensus 101 ~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~~~~~g~~~y~aPE~~ 173 (285)
T cd05631 101 EQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG-------ETVRGRVGTVGYMAPEVI 173 (285)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC-------CeecCCCCCCCccCHhhh
Confidence 77776666544 79999999999999999999999999999998654321 111234589999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCC----
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWS---- 220 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps---- 220 (241)
.+..++.++||||||+++|++++|+.||......................++...+.++.+|+++||+.+|.+||+
T Consensus 174 ~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~ 253 (285)
T cd05631 174 NNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGN 253 (285)
T ss_pred cCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCC
Confidence 9999999999999999999999999999765443332223323333344556677889999999999999999997
Q ss_pred -hHHHhcCCCCCCCCc
Q 042809 221 -AEELLNHTFISGNAK 235 (241)
Q Consensus 221 -~~~~l~~p~~~~~~~ 235 (241)
++++++||||++...
T Consensus 254 ~~~~~~~h~~~~~~~~ 269 (285)
T cd05631 254 GAAGVKQHPIFKNINF 269 (285)
T ss_pred CHHHHhcCHhhcCCCH
Confidence 899999999987654
No 26
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=7.8e-44 Score=282.12 Aligned_cols=218 Identities=30% Similarity=0.524 Sum_probs=178.5
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+|+.||+|.+... ...+.+.+|+.++.+++||||++ ..++..|+||||+.+++|.+++.. ...+++
T Consensus 39 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~ 117 (329)
T PTZ00263 39 HKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRK-AGRFPN 117 (329)
T ss_pred ECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHH-cCCCCH
Confidence 4678999999998743 23456889999999999999998 677899999999999999999987 456677
Q ss_pred HHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++. ++||++|++||||||+||+++.++.+||+|||++...... .....|++.|+|||.+.
T Consensus 118 ~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~---------~~~~~gt~~y~aPE~~~ 188 (329)
T PTZ00263 118 DVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR---------TFTLCGTPEYLAPEVIQ 188 (329)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC---------cceecCChhhcCHHHHc
Confidence 76665554 4489999999999999999999999999999998754321 12345899999999999
Q ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCC-----
Q 042809 146 NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWS----- 220 (241)
Q Consensus 146 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----- 220 (241)
+..++.++|+||||+++|+|++|..||.+......... . ......++..++..+.+|+++||+.||.+||+
T Consensus 189 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~---i-~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~ 264 (329)
T PTZ00263 189 SKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEK---I-LAGRLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGG 264 (329)
T ss_pred CCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHH---H-hcCCcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCC
Confidence 98899999999999999999999999976433222211 1 12334556667889999999999999999996
Q ss_pred hHHHhcCCCCCCC
Q 042809 221 AEELLNHTFISGN 233 (241)
Q Consensus 221 ~~~~l~~p~~~~~ 233 (241)
+++++.||||+..
T Consensus 265 ~~~ll~hp~f~~~ 277 (329)
T PTZ00263 265 VADVKNHPYFHGA 277 (329)
T ss_pred HHHHhcCCccCCC
Confidence 7999999999763
No 27
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.8e-43 Score=263.65 Aligned_cols=230 Identities=27% Similarity=0.377 Sum_probs=184.7
Q ss_pred CCCCCCcEEEEEeccchHHH----HHHHHHHHHHhhcCCCcccc-------cCCceeeeeecccCCCCHHHHHHHhCCCC
Q 042809 1 MNKGTGALFVVKSAESEAGV----QALRNEAEIRQSLNSPNIGR-------NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~~~~~~----~~~~~e~~~l~~l~h~~i~~-------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~ 69 (241)
+|+.|+.+||+|.++.+... -...+|+.+|.+++|||||. .+-+.+|+|||||++ +|.+++....+++
T Consensus 96 kdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLksl~d~m~q~F 174 (419)
T KOG0663|consen 96 KDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKSLMETMKQPF 174 (419)
T ss_pred ccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHHh-hHHHHHHhccCCC
Confidence 58999999999998854322 23579999999999999987 455679999999986 9999999988899
Q ss_pred CHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccc
Q 042809 70 DAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEV 143 (241)
Q Consensus 70 ~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~ 143 (241)
....++.+..|+ ||.+.|+|||||++|++++..|.+||+|||+|..++... .......-|..|+|||.
T Consensus 175 ~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~------k~~T~lVVTLWYRaPEL 248 (419)
T KOG0663|consen 175 LPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL------KPYTPLVVTLWYRAPEL 248 (419)
T ss_pred chHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCc------ccCcceEEEeeecCHHH
Confidence 999998888876 699999999999999999999999999999999876631 22233446889999999
Q ss_pred ccccC-CCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCC---------------------------CC
Q 042809 144 LRNEG-LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP---------------------------HF 195 (241)
Q Consensus 144 ~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~ 195 (241)
+.|.+ |+.+.|+||+||++.|++++.+.|.+..+-+....+......... .+
T Consensus 249 LLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF 328 (419)
T KOG0663|consen 249 LLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKF 328 (419)
T ss_pred hcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhc
Confidence 98855 889999999999999999999999876544433333322211110 01
Q ss_pred Chh-hHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCccC
Q 042809 196 PTQ-FFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKN 237 (241)
Q Consensus 196 ~~~-~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~~~ 237 (241)
+.. +++...+|+..+|..||.+|.|++++|.|.||++.+...
T Consensus 329 ~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~ 371 (419)
T KOG0663|consen 329 GALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPI 371 (419)
T ss_pred cccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCCC
Confidence 111 446788999999999999999999999999999865543
No 28
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.5e-43 Score=277.37 Aligned_cols=221 Identities=29% Similarity=0.479 Sum_probs=179.7
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+++.||+|.+... .....+.+|+.++.+++||||++ ...+..|+||||+++|+|.+++.. ...+++
T Consensus 14 ~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~ 92 (312)
T cd05585 14 KRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQR-EGRFDL 92 (312)
T ss_pred ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHh-cCCCCH
Confidence 5678999999998632 33456788999999999999988 567889999999999999999987 456777
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++.|+ ||++|++||||||+||+++.++.++|+|||++....... .......|++.|+|||.+.
T Consensus 93 ~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~gt~~y~aPE~~~ 166 (312)
T cd05585 93 SRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD------DKTNTFCGTPEYLAPELLL 166 (312)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC------CccccccCCcccCCHHHHc
Confidence 7777666544 799999999999999999999999999999986432211 1122345899999999999
Q ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC---ChH
Q 042809 146 NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW---SAE 222 (241)
Q Consensus 146 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~ 222 (241)
+..++.++||||+|+++|++++|..||.+......... .......++...+..+.+++.+||..+|.+|| ++.
T Consensus 167 ~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~ 242 (312)
T cd05585 167 GHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRK----ILQEPLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQ 242 (312)
T ss_pred CCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHH----HHcCCCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHH
Confidence 98899999999999999999999999976543322221 12334556677888999999999999999997 579
Q ss_pred HHhcCCCCCCC
Q 042809 223 ELLNHTFISGN 233 (241)
Q Consensus 223 ~~l~~p~~~~~ 233 (241)
+++.||||+..
T Consensus 243 e~l~hp~~~~~ 253 (312)
T cd05585 243 EIKNHPFFSQL 253 (312)
T ss_pred HHHcCCCcCCC
Confidence 99999999874
No 29
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-43 Score=275.33 Aligned_cols=227 Identities=28% Similarity=0.435 Sum_probs=194.6
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHH
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAG 72 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 72 (241)
+--||..||||++.+. .....+++|++-|+.++|||||+ ...-.+|+|+|.-++|+|++||-.+...+.+.
T Consensus 39 HVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~ 118 (864)
T KOG4717|consen 39 HVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNED 118 (864)
T ss_pred hhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHH
Confidence 3458999999998843 34566899999999999999999 56678999999999999999999999999999
Q ss_pred HHHHHHHHH------hhcCCccccCCCCCcEEeec-CCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 73 VIRLYTKEI------LHGNGILHCDLKCNNVLLGS-HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 73 ~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
.++.++.|| +|+..+|||||||+|+++-. -|-+||+|||++..+.+ .......||+..|.|||++.
T Consensus 119 La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P-------G~kL~TsCGSLAYSAPEILL 191 (864)
T KOG4717|consen 119 LAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP-------GKKLTTSCGSLAYSAPEILL 191 (864)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCC-------cchhhcccchhhccCchhhh
Confidence 999999988 58899999999999997744 58899999999976544 34455678999999999999
Q ss_pred ccCCC-chhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHH
Q 042809 146 NEGLD-FATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224 (241)
Q Consensus 146 ~~~~~-~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 224 (241)
|..|+ ++.||||||+++|.++.|+.||....+......+. ...+..|..++.++++||..||..+|++|.|++++
T Consensus 192 GDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmIm----DCKYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI 267 (864)
T KOG4717|consen 192 GDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIM----DCKYTVPSHVSKECRDLIQSMLVRDPKKRASLEEI 267 (864)
T ss_pred cCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhh----cccccCchhhhHHHHHHHHHHHhcCchhhccHHHH
Confidence 98886 78999999999999999999998765444433333 56678889999999999999999999999999999
Q ss_pred hcCCCCCCCCccCCC
Q 042809 225 LNHTFISGNAKKNST 239 (241)
Q Consensus 225 l~~p~~~~~~~~~~~ 239 (241)
..++|++....-.++
T Consensus 268 ~s~~Wlq~~D~~~sT 282 (864)
T KOG4717|consen 268 VSTSWLQAGDRGLST 282 (864)
T ss_pred hccccccCCCCCccc
Confidence 999999876654443
No 30
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=5.1e-43 Score=276.80 Aligned_cols=221 Identities=27% Similarity=0.450 Sum_probs=179.5
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+|+.||+|.+... .....+.+|+++++.++||||++ ...+..|+||||+++++|..++.. ...+++
T Consensus 16 ~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~-~~~~~~ 94 (323)
T cd05595 16 EKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR-ERVFTE 94 (323)
T ss_pred ECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHH-cCCCCH
Confidence 5678999999998743 23456778999999999999988 567789999999999999998876 456777
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++.|+ ||++|++||||||+||+++.++.++|+|||++...... ........|++.|+|||.+.
T Consensus 95 ~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~------~~~~~~~~gt~~y~aPE~~~ 168 (323)
T cd05595 95 ERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD------GATMKTFCGTPEYLAPEVLE 168 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCC------CCccccccCCcCcCCccccc
Confidence 7777766654 79999999999999999999999999999988642111 11122345899999999999
Q ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC-----C
Q 042809 146 NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW-----S 220 (241)
Q Consensus 146 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s 220 (241)
+..++.++|+||||+++|++++|..||............. .....++..+++.+.+++.+||+.+|.+|+ +
T Consensus 169 ~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~----~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~ 244 (323)
T cd05595 169 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL----MEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSD 244 (323)
T ss_pred CCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHh----cCCCCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCC
Confidence 8889999999999999999999999997654433322221 233445667888999999999999999998 9
Q ss_pred hHHHhcCCCCCCC
Q 042809 221 AEELLNHTFISGN 233 (241)
Q Consensus 221 ~~~~l~~p~~~~~ 233 (241)
+.++++||||...
T Consensus 245 ~~~~l~h~~~~~~ 257 (323)
T cd05595 245 AKEVMEHRFFLSI 257 (323)
T ss_pred HHHHHcCCCcCCC
Confidence 9999999999763
No 31
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=4e-43 Score=277.86 Aligned_cols=221 Identities=27% Similarity=0.469 Sum_probs=179.8
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+|+.||+|.+... .....+.+|+.+++.++||||++ ..++..|+||||+++|+|.+++.. ...+++
T Consensus 16 ~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-~~~l~~ 94 (328)
T cd05593 16 EKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSR-ERVFSE 94 (328)
T ss_pred ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHh-cCCCCH
Confidence 5678999999998743 33456789999999999999987 677889999999999999999876 456777
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++.|+ ||++|++||||||+||+++.++.+||+|||++...... ........|++.|+|||.+.
T Consensus 95 ~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~------~~~~~~~~gt~~y~aPE~~~ 168 (328)
T cd05593 95 DRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD------AATMKTFCGTPEYLAPEVLE 168 (328)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc------ccccccccCCcCccChhhhc
Confidence 7776666544 79999999999999999999999999999998642211 11122346899999999999
Q ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC-----C
Q 042809 146 NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW-----S 220 (241)
Q Consensus 146 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s 220 (241)
+..++.++|+||||+++|++++|+.||............ ......++...+.++.+++++||..+|.+|+ +
T Consensus 169 ~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~----~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~ 244 (328)
T cd05593 169 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI----LMEDIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDD 244 (328)
T ss_pred CCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHh----ccCCccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCC
Confidence 888999999999999999999999999765433322221 2233456677888999999999999999997 8
Q ss_pred hHHHhcCCCCCCC
Q 042809 221 AEELLNHTFISGN 233 (241)
Q Consensus 221 ~~~~l~~p~~~~~ 233 (241)
+.++++||||...
T Consensus 245 ~~~il~h~~~~~~ 257 (328)
T cd05593 245 AKEIMRHSFFTGV 257 (328)
T ss_pred HHHHhcCCCcCCC
Confidence 9999999999763
No 32
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-43 Score=274.93 Aligned_cols=228 Identities=25% Similarity=0.450 Sum_probs=176.3
Q ss_pred CCCCCCcEEEEEeccchH----------------HHHHHHHHHHHHhhcCCCcccc-------cCCceeeeeecccCCCC
Q 042809 1 MNKGTGALFVVKSAESEA----------------GVQALRNEAEIRQSLNSPNIGR-------NGEKTVNIFMEYMAGGS 57 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~~~~----------------~~~~~~~e~~~l~~l~h~~i~~-------~~~~~~~lv~e~~~~~~ 57 (241)
+|..+|+.||||++.+.. ..+...+|+.+|+++.|||||+ .....+|+|+|||..|.
T Consensus 117 r~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~ 196 (576)
T KOG0585|consen 117 RDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGE 196 (576)
T ss_pred eecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCcccCceEEEEEeccCCc
Confidence 366789999999977321 2357889999999999999998 56778999999999887
Q ss_pred HHHHHHHhCCC-CCHHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccc
Q 042809 58 LLDVAEKFGGT-LDAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQ 130 (241)
Q Consensus 58 L~~~l~~~~~~-~~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 130 (241)
+...-. ..+ +....++.+++ +|||.+|++||||||+|+|++.+|++||+|||.+...... ..........
T Consensus 197 v~w~p~--d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~-~~~~~d~~L~ 273 (576)
T KOG0585|consen 197 VKWCPP--DKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQG-SDEGSDDQLS 273 (576)
T ss_pred cccCCC--CcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccceeeecccC-CccccHHHHh
Confidence 643322 233 77777777766 6699999999999999999999999999999999755332 1112222333
Q ss_pred cccCcccccCcccccccC----CCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCC--hhhHHHHH
Q 042809 131 SIGGTQLWMAPEVLRNEG----LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP--TQFFKKVL 204 (241)
Q Consensus 131 ~~~~~~~~~aPE~~~~~~----~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 204 (241)
...|||.|+|||.+.++. .+.+.||||+|++||-++.|+.||.+...-.....+ ...+..+| +.+.+.++
T Consensus 274 ~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KI----vn~pL~fP~~pe~~e~~k 349 (576)
T KOG0585|consen 274 RTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKI----VNDPLEFPENPEINEDLK 349 (576)
T ss_pred hcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHH----hcCcccCCCcccccHHHH
Confidence 467999999999997732 347889999999999999999999875332222222 23333333 34678999
Q ss_pred HHHHHhhccCCCCCCChHHHhcCCCCCCCCc
Q 042809 205 DFLAKCLERKPEKRWSAEELLNHTFISGNAK 235 (241)
Q Consensus 205 ~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~ 235 (241)
+||++||.+||.+|+++.++..|||......
T Consensus 350 Dli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~ 380 (576)
T KOG0585|consen 350 DLIKRLLEKDPEQRITLPDIKLHPWVTRDGD 380 (576)
T ss_pred HHHHHHhhcChhheeehhhheecceeccCCC
Confidence 9999999999999999999999999987643
No 33
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=7.2e-43 Score=252.90 Aligned_cols=228 Identities=25% Similarity=0.336 Sum_probs=183.8
Q ss_pred CCCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 1 MNKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
+|.+||+.||||.+.-. .......+|++.|+.++|+||+. ...+.+.+|+||++ .+|...+++....++.
T Consensus 22 ~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~-tdLe~vIkd~~i~l~p 100 (318)
T KOG0659|consen 22 RDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMP-TDLEVVIKDKNIILSP 100 (318)
T ss_pred EecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEecc-ccHHHHhcccccccCH
Confidence 47899999999998732 22456889999999999999988 67889999999997 6999999998889999
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
+.++.++.+. ||++.+.||||||.|++++++|.+||+|||++..+....... ....-|+.|+|||.+.
T Consensus 101 a~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~------~~~V~TRWYRAPELLf 174 (318)
T KOG0659|consen 101 ADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQ------THQVVTRWYRAPELLF 174 (318)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCccc------ccceeeeeccChHHhc
Confidence 9998887754 799999999999999999999999999999998776522211 1224688999999998
Q ss_pred cc-CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCC------------------------CChhhH
Q 042809 146 NE-GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPH------------------------FPTQFF 200 (241)
Q Consensus 146 ~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~ 200 (241)
|. .|+...|+||+||++.|++-|.+-|.+..+-+-...+........++ .-...+
T Consensus 175 Gsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas 254 (318)
T KOG0659|consen 175 GSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAAS 254 (318)
T ss_pred cchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCcccccccccc
Confidence 74 58899999999999999999988887765444433333332222211 112234
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCc
Q 042809 201 KKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAK 235 (241)
Q Consensus 201 ~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~ 235 (241)
.++.+|+.+||..||.+|+|+.|++.|+||+..+.
T Consensus 255 ~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~ 289 (318)
T KOG0659|consen 255 SDALDLLSKMLTYNPKKRITASQALKHPYFKSLPL 289 (318)
T ss_pred HHHHHHHHhhhccCchhcccHHHHhcchhhhcCCC
Confidence 67899999999999999999999999999986543
No 34
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.4e-43 Score=268.91 Aligned_cols=218 Identities=26% Similarity=0.450 Sum_probs=185.4
Q ss_pred CCCCCcEEEEEeccc-----hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAES-----EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
+...|+.||||.+++ +...-.+++|++||..|+||||+. ++.+.+.+||||..+|.|++|+.+ .+.+++
T Consensus 74 e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSe-r~~LsE 152 (668)
T KOG0611|consen 74 EHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGGELYDYISE-RGSLSE 152 (668)
T ss_pred hccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCccHHHHHHH-hccccH
Confidence 346799999999774 344556899999999999999988 788999999999999999999998 578999
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..++.+++|| +|.++++|||||.+||++|.++.+||.|||++..+.+ ..-...+||++.|.+||++.
T Consensus 153 rEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~-------~kfLqTFCGSPLYASPEIvN 225 (668)
T KOG0611|consen 153 REARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYAD-------KKFLQTFCGSPLYASPEIVN 225 (668)
T ss_pred HHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhcc-------ccHHHHhcCCcccCCccccC
Confidence 9999999987 6999999999999999999999999999999987655 22345688999999999999
Q ss_pred ccCC-CchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHH
Q 042809 146 NEGL-DFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224 (241)
Q Consensus 146 ~~~~-~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 224 (241)
|.+| .+..|.||||+++|.++.|..||.+.+.......+. .+. +. .+.-+.+..-||++||..||.+|.|++++
T Consensus 226 G~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs---~Ga-Yr-EP~~PSdA~gLIRwmLmVNP~RRATieDi 300 (668)
T KOG0611|consen 226 GTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQIS---RGA-YR-EPETPSDASGLIRWMLMVNPERRATIEDI 300 (668)
T ss_pred CCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhh---ccc-cc-CCCCCchHHHHHHHHHhcCcccchhHHHH
Confidence 9998 589999999999999999999999875544433333 222 11 23345578899999999999999999999
Q ss_pred hcCCCCCC
Q 042809 225 LNHTFISG 232 (241)
Q Consensus 225 l~~p~~~~ 232 (241)
..|=|++-
T Consensus 301 AsHWWvNw 308 (668)
T KOG0611|consen 301 ASHWWVNW 308 (668)
T ss_pred hhhheeec
Confidence 99988854
No 35
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.4e-42 Score=269.30 Aligned_cols=226 Identities=28% Similarity=0.419 Sum_probs=178.8
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHh---CCC
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF---GGT 68 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~---~~~ 68 (241)
++.+|+.||+|.+... ...+.+..|+.+++.+.|+||++ ..+...++||||+++|+|..++... ...
T Consensus 14 ~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~ 93 (280)
T cd05608 14 MRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPG 93 (280)
T ss_pred EccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCC
Confidence 5678999999998643 23356788999999999999987 5667899999999999999887542 345
Q ss_pred CCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcc
Q 042809 69 LDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPE 142 (241)
Q Consensus 69 ~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE 142 (241)
+++..+..++.|+ ||++|++||||+|+||+++.++.++|+|||.+........ ......|++.|+|||
T Consensus 94 l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~------~~~~~~g~~~y~aPE 167 (280)
T cd05608 94 FPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS------KTKGYAGTPGFMAPE 167 (280)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc------cccccCCCcCccCHH
Confidence 7777776666554 7999999999999999999999999999999865433111 112345789999999
Q ss_pred cccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC---
Q 042809 143 VLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW--- 219 (241)
Q Consensus 143 ~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp--- 219 (241)
.+.+..++.++|+||||+++|++++|+.||.......................+..++..+.+++.+||+.+|.+||
T Consensus 168 ~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~ 247 (280)
T cd05608 168 LLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLAKDPEKRLGFR 247 (280)
T ss_pred HhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHhcCCHHHhcCCC
Confidence 99999999999999999999999999999976433222222222222333445566788999999999999999999
Q ss_pred --ChHHHhcCCCCCCC
Q 042809 220 --SAEELLNHTFISGN 233 (241)
Q Consensus 220 --s~~~~l~~p~~~~~ 233 (241)
|++++++||||+..
T Consensus 248 ~~~~~~~l~h~~~~~~ 263 (280)
T cd05608 248 DGNCDGLRTHPLFRDL 263 (280)
T ss_pred CCCHHHHhcChhhhcC
Confidence 88999999999874
No 36
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-43 Score=271.76 Aligned_cols=225 Identities=24% Similarity=0.404 Sum_probs=179.1
Q ss_pred CCCCCcEEEEEeccchH-HHHH--HHHHHHHHhhcC-CCcccc------cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESEA-GVQA--LRNEAEIRQSLN-SPNIGR------NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~-~~~~--~~~e~~~l~~l~-h~~i~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
.+.+|..||||..+..- ..++ =.+|++.|++|. ||||++ +.+.++|+|||||+ .+|+.+++.++..+++
T Consensus 31 ~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md-~NLYqLmK~R~r~fse 109 (538)
T KOG0661|consen 31 SKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMD-CNLYQLMKDRNRLFSE 109 (538)
T ss_pred ecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhh-hhHHHHHhhcCCcCCH
Confidence 46789999999877431 1222 358999999999 999988 44459999999996 6999999999999999
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..++.++.|+ +|.+|+.|||+||+|||++.+..+||+|||+|+.+..... ......|+.|+|||++.
T Consensus 110 ~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpP-------YTeYVSTRWYRAPEvLL 182 (538)
T KOG0661|consen 110 SDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPP-------YTEYVSTRWYRAPEVLL 182 (538)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccCCC-------cchhhhcccccchHHhh
Confidence 9999999988 5999999999999999999999999999999987655222 22344689999999985
Q ss_pred -ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCC----------------------------CCC
Q 042809 146 -NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP----------------------------HFP 196 (241)
Q Consensus 146 -~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~ 196 (241)
.+.|+...|+||+||+++|+.+-++.|.+..+ ...+.+....-..| ..-
T Consensus 183 rs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE--~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~ 260 (538)
T KOG0661|consen 183 RSGYYSSPVDMWAVGCIMAELYSLRPLFPGASE--IDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLL 260 (538)
T ss_pred hccccCCchHHHHHHHHHHHHHHhcccCCCCcH--HHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhC
Confidence 46689999999999999999999999976432 22222222111111 011
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCcc
Q 042809 197 TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKK 236 (241)
Q Consensus 197 ~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~~ 236 (241)
+..+.++.++|.+|++.||++|||++++++||||.....-
T Consensus 261 p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~~~ 300 (538)
T KOG0661|consen 261 PNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGRAS 300 (538)
T ss_pred cccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccccc
Confidence 2256789999999999999999999999999999876553
No 37
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-42 Score=274.89 Aligned_cols=226 Identities=29% Similarity=0.405 Sum_probs=189.5
Q ss_pred CCCCCcEEEEEeccchH-----HHHHHHHHHHHHhhcC-CCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 2 NKGTGALFVVKSAESEA-----GVQALRNEAEIRQSLN-SPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l~-h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
++.||+.+|+|.+.+.. ..+.+.+|+.+|+++. ||||+. ++...+++|||+|.||.|.+.+... .++
T Consensus 56 ~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~--~~s 133 (382)
T KOG0032|consen 56 EKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK--HYS 133 (382)
T ss_pred ecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc--cCC
Confidence 57889999999987543 3468999999999999 999988 7788999999999999999999986 388
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecC----CCeeecCCCcchhhcccccCCccccccccccCcccccC
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSH----GDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMA 140 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~----~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 140 (241)
+..+..++.|+ ||+.|++||||||+|+++... +.++++|||++..... .......+||+.|+|
T Consensus 134 E~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~-------~~~~~~~~Gtp~y~A 206 (382)
T KOG0032|consen 134 ERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP-------GERLHTIVGTPEYVA 206 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC-------CceEeeecCCccccC
Confidence 88887777765 799999999999999999654 4799999999986544 234456789999999
Q ss_pred cccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCC
Q 042809 141 PEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWS 220 (241)
Q Consensus 141 PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 220 (241)
||.+.+..|+..+|+||+|+++|.|++|..||.+.+.......+..............++..+.++|+.|+..+|.+|+|
T Consensus 207 PEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~t 286 (382)
T KOG0032|consen 207 PEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLT 286 (382)
T ss_pred chhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCC
Confidence 99999999999999999999999999999999887655544433322223334445667899999999999999999999
Q ss_pred hHHHhcCCCCCCCCcc
Q 042809 221 AEELLNHTFISGNAKK 236 (241)
Q Consensus 221 ~~~~l~~p~~~~~~~~ 236 (241)
+.++|+|||++.....
T Consensus 287 a~~~L~HpWi~~~~~~ 302 (382)
T KOG0032|consen 287 AAQALQHPWIKSIGEA 302 (382)
T ss_pred HHHHhcCccccCCccc
Confidence 9999999999876443
No 38
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=8.2e-43 Score=276.91 Aligned_cols=222 Identities=30% Similarity=0.510 Sum_probs=178.0
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+|+.||+|++... .....+.+|+.++..++||||++ ...+..|+||||++|++|.+++.. ...+++
T Consensus 22 ~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~l~~ 100 (333)
T cd05600 22 KKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNN-LGVLSE 100 (333)
T ss_pred ECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHH-cCCCCH
Confidence 4678999999998743 23456889999999999999988 667889999999999999999986 456777
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++.|+ ||+.|++||||+|+||+++.++.+||+|||++..... ......|++.|+|||.+.
T Consensus 101 ~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~---------~~~~~~gt~~y~aPE~~~ 171 (333)
T cd05600 101 DHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT---------YANSVVGSPDYMAPEVLR 171 (333)
T ss_pred HHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc---------ccCCcccCccccChhHhc
Confidence 7766666554 7999999999999999999999999999999875432 112345899999999999
Q ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhc-CCCCCCC---hhhHHHHHHHHHHhhccCCCCCCCh
Q 042809 146 NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACS-NEKPHFP---TQFFKKVLDFLAKCLERKPEKRWSA 221 (241)
Q Consensus 146 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~ 221 (241)
+..++.++||||||+++|+|++|..||................. ...+... ...+.++.+++.+||..+|.+|||+
T Consensus 172 ~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~ 251 (333)
T cd05600 172 GKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSL 251 (333)
T ss_pred CCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCH
Confidence 98999999999999999999999999977544333222221111 1111111 2457899999999999999999999
Q ss_pred HHHhcCCCCCCC
Q 042809 222 EELLNHTFISGN 233 (241)
Q Consensus 222 ~~~l~~p~~~~~ 233 (241)
++++.||||+..
T Consensus 252 ~~ll~h~~~~~~ 263 (333)
T cd05600 252 EDIKNHPFFKEV 263 (333)
T ss_pred HHHHhCcccCCC
Confidence 999999999864
No 39
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.3e-42 Score=272.48 Aligned_cols=226 Identities=28% Similarity=0.445 Sum_probs=176.3
Q ss_pred CCCCCcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 2 NKGTGALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
++.+|..||+|.+..+ ...+.+.+|++++++++||||++ ..++..++||||+++++|.+++... ..+++..
T Consensus 26 ~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~ 104 (331)
T cd06649 26 HKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEA-KRIPEEI 104 (331)
T ss_pred ECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHHc-CCCCHHH
Confidence 5678999999987743 34567999999999999999998 5667899999999999999999873 4577777
Q ss_pred HHHHHHHH------hhcC-CccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 74 IRLYTKEI------LHGN-GILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 74 ~~~~~~~~------Lh~~-~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
+..++.|+ ||+. +++||||||+||+++.++.++|+|||++...... ......|++.|+|||.+.+
T Consensus 105 ~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--------~~~~~~g~~~y~aPE~~~~ 176 (331)
T cd06649 105 LGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--------MANSFVGTRSYMSPERLQG 176 (331)
T ss_pred HHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc--------ccccCCCCcCcCCHhHhcC
Confidence 66666544 7875 6999999999999999999999999998654331 1123458899999999999
Q ss_pred cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHH----------------------------------------
Q 042809 147 EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKI---------------------------------------- 186 (241)
Q Consensus 147 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~---------------------------------------- 186 (241)
..++.++|+||||+++|++++|+.||..............
T Consensus 177 ~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
T cd06649 177 THYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFEL 256 (331)
T ss_pred CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHH
Confidence 8899999999999999999999999965433222111110
Q ss_pred ---HhcCCCCCC-ChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCcc
Q 042809 187 ---ACSNEKPHF-PTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKK 236 (241)
Q Consensus 187 ---~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~~ 236 (241)
......+.. ....+.++.+|+.+||+.+|++|||++++++||||+....+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~~~ 310 (331)
T cd06649 257 LDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSEVE 310 (331)
T ss_pred HHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcccc
Confidence 000111111 12356789999999999999999999999999999866543
No 40
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-43 Score=275.83 Aligned_cols=211 Identities=27% Similarity=0.414 Sum_probs=176.1
Q ss_pred cEEEEEeccc-hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHH-hCCCCCHHHHHHHHH
Q 042809 7 ALFVVKSAES-EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEK-FGGTLDAGVIRLYTK 79 (241)
Q Consensus 7 ~~vaiK~~~~-~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~ 79 (241)
..||+|.+.. ....+.|.+|+.+|++|+|+|||+ ..++.+|||||||+.|+|.+||+. .+..+.......++.
T Consensus 231 ~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~ 310 (468)
T KOG0197|consen 231 TKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAA 310 (468)
T ss_pred CcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHH
Confidence 3788888775 334577889999999999999998 555689999999999999999997 567788888888888
Q ss_pred HH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCchh
Q 042809 80 EI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFAT 153 (241)
Q Consensus 80 ~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~ 153 (241)
|+ |+++++|||||...||||+.+..+||+|||+++...+... .......-+..|.|||.+...+++.++
T Consensus 311 qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y-----~~~~~~kfPIkWtAPEa~~~~~FS~kS 385 (468)
T KOG0197|consen 311 QIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEY-----TASEGGKFPIKWTAPEALNYGKFSSKS 385 (468)
T ss_pred HHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCce-----eecCCCCCCceecCHHHHhhCCccccc
Confidence 76 7899999999999999999999999999999985433111 111111235669999999999999999
Q ss_pred hHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHh
Q 042809 154 DIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225 (241)
Q Consensus 154 Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l 225 (241)
||||||++|||++| |+.||.+.+... .+.....+.+...|..+|+.+.++++.||..+|++|||++.+.
T Consensus 386 DVWSFGVlL~E~fT~G~~py~~msn~e---v~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 386 DVWSFGVLLWELFTYGRVPYPGMSNEE---VLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred ceeehhhhHHHHhccCCCCCCCCCHHH---HHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 99999999999999 999998765544 4455556777778888999999999999999999999999764
No 41
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-44 Score=276.77 Aligned_cols=223 Identities=34% Similarity=0.569 Sum_probs=183.8
Q ss_pred CCCCCCcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHH
Q 042809 1 MNKGTGALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAG 72 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 72 (241)
+|++|+++||+|++.- +...+.+.+|+..+.+++++||.+ ..+..+|++||||.||++.+.++.. ..+++.
T Consensus 33 ~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~~-~~~~E~ 111 (467)
T KOG0201|consen 33 IDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKSG-NILDEF 111 (467)
T ss_pred eeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcchhhhhccC-CCCccc
Confidence 4789999999999883 345678999999999999999977 6778899999999999999999973 333443
Q ss_pred HHH------HHHHHHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 73 VIR------LYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 73 ~~~------~~~~~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
.+. ..++.+||.++.+|||||+.||+++.+|.+||+|||.+....... .....+.||+.|||||++++
T Consensus 112 ~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~------~rr~tfvGTPfwMAPEVI~~ 185 (467)
T KOG0201|consen 112 EIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV------KRRKTFVGTPFWMAPEVIKQ 185 (467)
T ss_pred eeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechh------hccccccccccccchhhhcc
Confidence 332 334567899999999999999999999999999999997654421 12256779999999999999
Q ss_pred cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 147 EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 147 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
..|+.++||||||++.+||.+|.+|+.+...- ..+...-+..+|.+....++.+++|+..||.++|+.|||+.+++.
T Consensus 186 ~~Y~~KADIWSLGITaiEla~GePP~s~~hPm---rvlflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 186 SGYDTKADIWSLGITAIELAKGEPPHSKLHPM---RVLFLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred ccccchhhhhhhhHHHHHHhcCCCCCcccCcc---eEEEeccCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 99999999999999999999999999775331 111222234555666678889999999999999999999999999
Q ss_pred CCCCCCC
Q 042809 227 HTFISGN 233 (241)
Q Consensus 227 ~p~~~~~ 233 (241)
|+|++.+
T Consensus 263 h~FIk~a 269 (467)
T KOG0201|consen 263 HKFIKRA 269 (467)
T ss_pred hHHHHhc
Confidence 9999983
No 42
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.8e-42 Score=273.36 Aligned_cols=221 Identities=28% Similarity=0.463 Sum_probs=178.0
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhc-CCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSL-NSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l-~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
++.+++.||+|.+... ...+.+..|..++..+ .||||++ ...+.+|+||||+++|+|.+++.. ...++
T Consensus 16 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~-~~~l~ 94 (320)
T cd05590 16 LKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQK-SRRFD 94 (320)
T ss_pred EcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHH-cCCCC
Confidence 5678999999998743 2345677888888877 5999988 577889999999999999999887 35677
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+..+..++.|+ ||++|++||||||+||+++.++.++|+|||++...... ........|++.|+|||.+
T Consensus 95 ~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~------~~~~~~~~gt~~y~aPE~~ 168 (320)
T cd05590 95 EARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN------GKTTSTFCGTPDYIAPEIL 168 (320)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC------CCcccccccCccccCHHHH
Confidence 77777666554 79999999999999999999999999999998642210 0112234589999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCCh---
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSA--- 221 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~--- 221 (241)
.+..++.++|+||||+++|++++|+.||............. ......+...+.++.+++++||+.+|.+||++
T Consensus 169 ~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~----~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~ 244 (320)
T cd05590 169 QEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL----NDEVVYPTWLSQDAVDILKAFMTKNPTMRLGSLTL 244 (320)
T ss_pred cCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHh----cCCCCCCCCCCHHHHHHHHHHcccCHHHCCCCCCC
Confidence 98889999999999999999999999997754433322222 23344566678899999999999999999998
Q ss_pred ---HHHhcCCCCCCC
Q 042809 222 ---EELLNHTFISGN 233 (241)
Q Consensus 222 ---~~~l~~p~~~~~ 233 (241)
++++.||||+..
T Consensus 245 ~~~~~~~~h~~f~~~ 259 (320)
T cd05590 245 GGEEAILRHPFFKEL 259 (320)
T ss_pred CCHHHHHcCCCcCCC
Confidence 999999999763
No 43
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.5e-42 Score=275.58 Aligned_cols=214 Identities=25% Similarity=0.381 Sum_probs=175.4
Q ss_pred CcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHH
Q 042809 6 GALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIR 75 (241)
Q Consensus 6 ~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 75 (241)
+..||+|.+... ...+.+.+|+.++..++||||++ ...+.+|+||||+.+|+|.+++.. ...+++..+.
T Consensus 56 ~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~-~~~~~~~~~~ 134 (340)
T PTZ00426 56 FPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRR-NKRFPNDVGC 134 (340)
T ss_pred CeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHH
Confidence 468999987632 33456889999999999999998 567789999999999999999987 4567777776
Q ss_pred HHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCC
Q 042809 76 LYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGL 149 (241)
Q Consensus 76 ~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~ 149 (241)
.++.|+ ||++|++||||||+||+++.++.++|+|||++..... ......|++.|+|||.+.+..+
T Consensus 135 ~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~---------~~~~~~gt~~y~aPE~~~~~~~ 205 (340)
T PTZ00426 135 FYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT---------RTYTLCGTPEYIAPEILLNVGH 205 (340)
T ss_pred HHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC---------CcceecCChhhcCHHHHhCCCC
Confidence 666654 7999999999999999999999999999999865422 1123468999999999998888
Q ss_pred CchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC-----ChHHH
Q 042809 150 DFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW-----SAEEL 224 (241)
Q Consensus 150 ~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s~~~~ 224 (241)
+.++|+||||+++|+|++|..||.+.......... ......++...+..+.+++++||+.+|.+|+ |++++
T Consensus 206 ~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i----~~~~~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~ 281 (340)
T PTZ00426 206 GKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKI----LEGIIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNV 281 (340)
T ss_pred CccccccchhhHHHHHhcCCCCCCCCCHHHHHHHH----hcCCCCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHH
Confidence 99999999999999999999999875432222221 1233345666788999999999999999995 89999
Q ss_pred hcCCCCCCC
Q 042809 225 LNHTFISGN 233 (241)
Q Consensus 225 l~~p~~~~~ 233 (241)
++||||++.
T Consensus 282 ~~hp~f~~~ 290 (340)
T PTZ00426 282 KEHPWFGNI 290 (340)
T ss_pred HcCCCcCCC
Confidence 999999864
No 44
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2.9e-42 Score=268.56 Aligned_cols=222 Identities=25% Similarity=0.416 Sum_probs=170.3
Q ss_pred CCCCCcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 2 NKGTGALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
++.++..||+|.+... .....+.+|+.++++++||||++ ..+...++||||++ ++|.+++...+..++...
T Consensus 26 ~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~ 104 (288)
T cd07871 26 SKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLD-SDLKQYLDNCGNLMSMHN 104 (288)
T ss_pred ECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCC-cCHHHHHHhcCCCCCHHH
Confidence 4678999999987632 23456789999999999999988 56678999999997 599999987666677777
Q ss_pred HHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc-
Q 042809 74 IRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN- 146 (241)
Q Consensus 74 ~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~- 146 (241)
+..++.|+ ||++|++||||||+||+++.++.+||+|||++....... .......+++.|+|||.+.+
T Consensus 105 ~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~ 178 (288)
T cd07871 105 VKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPT------KTYSNEVVTLWYRPPDVLLGS 178 (288)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCC------ccccCceecccccChHHhcCC
Confidence 66665544 799999999999999999999999999999986432210 11123457889999999865
Q ss_pred cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCC------------------C--------CCChhhH
Q 042809 147 EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEK------------------P--------HFPTQFF 200 (241)
Q Consensus 147 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------------------~--------~~~~~~~ 200 (241)
..++.++|+||+|+++|++++|+.||.+.................. + ......+
T Consensus 179 ~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (288)
T cd07871 179 TEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLD 258 (288)
T ss_pred cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCC
Confidence 5578999999999999999999999976543332222211111000 0 0012345
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 201 KKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 201 ~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
.++.+|+++||..+|.+|||++++++||||
T Consensus 259 ~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 259 TDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred HHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 688999999999999999999999999998
No 45
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.1e-42 Score=268.32 Aligned_cols=223 Identities=23% Similarity=0.374 Sum_probs=170.3
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHH
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAG 72 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 72 (241)
++.+++.||+|.+... ...+.+.+|+.+++.++||||++ ..++..++||||++++.+..+.. ....++..
T Consensus 22 ~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~ 100 (287)
T cd07848 22 HKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEE-MPNGVPPE 100 (287)
T ss_pred ECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCCHHHHHHh-cCCCCCHH
Confidence 5678999999987632 33466889999999999999988 56778999999998876655443 34567777
Q ss_pred HHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 73 VIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 73 ~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
.+..++.|+ ||+.|++||||+|+||+++.++.++|+|||++........ .......|++.|+|||.+.+
T Consensus 101 ~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~ 175 (287)
T cd07848 101 KVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN-----ANYTEYVATRWYRSPELLLG 175 (287)
T ss_pred HHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc-----ccccccccccccCCcHHHcC
Confidence 777666655 7999999999999999999999999999999976532111 11223457899999999998
Q ss_pred cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCC------------------CC----------CCChh
Q 042809 147 EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNE------------------KP----------HFPTQ 198 (241)
Q Consensus 147 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~------------------~~----------~~~~~ 198 (241)
..++.++|+||+|+++|++++|+.||................... .+ .....
T Consensus 176 ~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (287)
T cd07848 176 APYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGI 255 (287)
T ss_pred CCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcc
Confidence 889999999999999999999999997643322211111100000 00 00112
Q ss_pred hHHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 199 FFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 199 ~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
.+..+.+|+++||+.+|++|||++++++||||
T Consensus 256 ~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 256 LSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred cCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 56679999999999999999999999999998
No 46
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=8.3e-43 Score=275.93 Aligned_cols=221 Identities=27% Similarity=0.467 Sum_probs=179.2
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+|+.||+|.+... .....+.+|++++..++||||++ ...+..|+||||+++|+|..++.. ...+++
T Consensus 16 ~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~-~~~l~~ 94 (325)
T cd05594 16 EKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSE 94 (325)
T ss_pred ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHh-cCCCCH
Confidence 5678999999998743 23456788999999999999987 567889999999999999998876 456777
Q ss_pred HHHHHHHHHH------hhc-CCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 72 GVIRLYTKEI------LHG-NGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~-~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
..+..++.|+ ||+ .|++||||||+||+++.++.+||+|||++...... ........|++.|+|||.+
T Consensus 95 ~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~------~~~~~~~~gt~~y~aPE~~ 168 (325)
T cd05594 95 DRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD------GATMKTFCGTPEYLAPEVL 168 (325)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC------CcccccccCCcccCCHHHH
Confidence 7777666654 797 89999999999999999999999999998642211 0111234589999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC-----
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW----- 219 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp----- 219 (241)
.+..++.++||||||+++|+|++|..||............. .....++...++++.+++++||+.+|++|+
T Consensus 169 ~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~----~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~ 244 (325)
T cd05594 169 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL----MEEIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPD 244 (325)
T ss_pred ccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHh----cCCCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCC
Confidence 98889999999999999999999999997654433322222 233445667788999999999999999997
Q ss_pred ChHHHhcCCCCCCC
Q 042809 220 SAEELLNHTFISGN 233 (241)
Q Consensus 220 s~~~~l~~p~~~~~ 233 (241)
++.++++||||++.
T Consensus 245 ~~~~il~h~~~~~~ 258 (325)
T cd05594 245 DAKEIMQHKFFAGI 258 (325)
T ss_pred CHHHHhcCCCcCCC
Confidence 99999999999864
No 47
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=3.7e-42 Score=271.93 Aligned_cols=220 Identities=30% Similarity=0.477 Sum_probs=175.9
Q ss_pred CCCCcEEEEEeccch------HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 3 KGTGALFVVKSAESE------AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 3 ~~~~~~vaiK~~~~~------~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
..+|+.||+|.+... .....+.+|+.+++.++||||++ ..++..|+||||+.+++|.+++... ..+.+
T Consensus 21 ~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~ 99 (323)
T cd05584 21 ADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLERE-GIFME 99 (323)
T ss_pred CCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeCCCCchHHHHHHHc-CCCCH
Confidence 467899999998743 22345678999999999999988 5677899999999999999999873 55666
Q ss_pred HHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++. ++||++|++||||||+||+++.++.++|+|||++....... .......|++.|+|||.+.
T Consensus 100 ~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~gt~~y~aPE~~~ 173 (323)
T cd05584 100 DTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG------TVTHTFCGTIEYMAPEILM 173 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC------CcccccCCCccccChhhcc
Confidence 66555554 44799999999999999999999999999999986322110 1112345899999999999
Q ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC-----C
Q 042809 146 NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW-----S 220 (241)
Q Consensus 146 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s 220 (241)
+..++.++||||||+++|++++|..||............ .......+...+..+.+++++||+.+|.+|| +
T Consensus 174 ~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 249 (323)
T cd05584 174 RSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKI----LKGKLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGD 249 (323)
T ss_pred CCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHH----HcCCCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCC
Confidence 888899999999999999999999999765433222221 1233455667788999999999999999999 8
Q ss_pred hHHHhcCCCCCCC
Q 042809 221 AEELLNHTFISGN 233 (241)
Q Consensus 221 ~~~~l~~p~~~~~ 233 (241)
+++++.||||+..
T Consensus 250 ~~~l~~h~~~~~~ 262 (323)
T cd05584 250 AAEVQSHPFFRHV 262 (323)
T ss_pred HHHHhcCCCcCCC
Confidence 9999999999754
No 48
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=8.5e-42 Score=273.03 Aligned_cols=224 Identities=31% Similarity=0.533 Sum_probs=172.0
Q ss_pred CCCCCcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 2 NKGTGALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
++.+|+.||||.+.. ......+.+|+++++.++|+||++ ...+.+++||||+++++|.+.. ...+..
T Consensus 95 ~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~-----~~~~~~ 169 (353)
T PLN00034 95 HRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTH-----IADEQF 169 (353)
T ss_pred ECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCcccccc-----cCCHHH
Confidence 467899999999753 234567899999999999999988 5677899999999999986532 223333
Q ss_pred HHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc-
Q 042809 74 IRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN- 146 (241)
Q Consensus 74 ~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~- 146 (241)
+..++. ++||++|++||||||+||+++.++.+||+|||++....... .......|+..|+|||.+..
T Consensus 170 ~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~ 243 (353)
T PLN00034 170 LADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM------DPCNSSVGTIAYMSPERINTD 243 (353)
T ss_pred HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceeccccc------ccccccccCccccCccccccc
Confidence 333333 55899999999999999999999999999999987543211 11123458999999998743
Q ss_pred ----cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChH
Q 042809 147 ----EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAE 222 (241)
Q Consensus 147 ----~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 222 (241)
...+.++||||||+++|++++|+.||....................+..+...+.++.+||.+||+.+|.+|||+.
T Consensus 244 ~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ 323 (353)
T PLN00034 244 LNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAM 323 (353)
T ss_pred cccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHH
Confidence 2335689999999999999999999974333333333333333444555667788999999999999999999999
Q ss_pred HHhcCCCCCCCCcc
Q 042809 223 ELLNHTFISGNAKK 236 (241)
Q Consensus 223 ~~l~~p~~~~~~~~ 236 (241)
++++||||......
T Consensus 324 ell~hp~~~~~~~~ 337 (353)
T PLN00034 324 QLLQHPFILRAQPG 337 (353)
T ss_pred HHhcCcccccCCcc
Confidence 99999999887543
No 49
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.9e-42 Score=272.94 Aligned_cols=225 Identities=29% Similarity=0.493 Sum_probs=177.2
Q ss_pred CCCCcEEEEEeccch------HHHHHHHHHHHHHhhcC-CCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 3 KGTGALFVVKSAESE------AGVQALRNEAEIRQSLN-SPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 3 ~~~~~~vaiK~~~~~------~~~~~~~~e~~~l~~l~-h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
..+|+.||+|++... ...+.+.+|+.++..++ |+||+. ..++.+++||||+.+|+|.+++.. ...++
T Consensus 25 ~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~ 103 (332)
T cd05614 25 HDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQ-RDNFS 103 (332)
T ss_pred CCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHH-cCCCC
Confidence 468999999998642 23456788999999995 899987 567789999999999999999987 35677
Q ss_pred HHHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+..+..++.| +||++|++||||||+||+++.++.++|+|||++........ .......|++.|+|||.+
T Consensus 104 ~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~ 178 (332)
T cd05614 104 EDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEK-----ERTYSFCGTIEYMAPEII 178 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCC-----CccccccCCccccCHHHh
Confidence 7777666654 47999999999999999999999999999999875422111 111234689999999999
Q ss_pred ccc-CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC----
Q 042809 145 RNE-GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW---- 219 (241)
Q Consensus 145 ~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---- 219 (241)
.+. .++.++||||||+++|++++|..||....................+..+..++..+.+++.+||+.+|++||
T Consensus 179 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~ 258 (332)
T cd05614 179 RGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGP 258 (332)
T ss_pred cCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCC
Confidence 865 478899999999999999999999965432222222222223344556677888999999999999999999
Q ss_pred -ChHHHhcCCCCCCC
Q 042809 220 -SAEELLNHTFISGN 233 (241)
Q Consensus 220 -s~~~~l~~p~~~~~ 233 (241)
+++++++||||+..
T Consensus 259 ~~~~~~l~h~~~~~~ 273 (332)
T cd05614 259 QGASEIKEHPFFKGL 273 (332)
T ss_pred CCHHHHHcCCCcCCC
Confidence 88899999999764
No 50
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=5.8e-42 Score=269.98 Aligned_cols=221 Identities=28% Similarity=0.491 Sum_probs=176.5
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhc-CCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSL-NSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l-~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
++.+|+.||+|.+..+ .....+..|..++..+ .||||++ ...+.+|+||||+.+++|..++.. ...++
T Consensus 16 ~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~-~~~~~ 94 (316)
T cd05620 16 LKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQD-KGRFD 94 (316)
T ss_pred ECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHH-cCCCC
Confidence 5678999999998753 2345567788887754 7999987 567899999999999999999987 45677
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
...+..++.|+ ||++|++||||||+||+++.++.++|+|||++...... ........|++.|+|||.+
T Consensus 95 ~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~gt~~y~aPE~~ 168 (316)
T cd05620 95 LYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG------DNRASTFCGTPDYIAPEIL 168 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccC------CCceeccCCCcCccCHHHH
Confidence 77766665544 79999999999999999999999999999988632110 0112235689999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCCh-HH
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSA-EE 223 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~~ 223 (241)
.+..++.++|+||+|+++|+|++|..||............. ...+..+...+.++.+++++||..+|.+||++ ++
T Consensus 169 ~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~ 244 (316)
T cd05620 169 QGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIR----VDTPHYPRWITKESKDILEKLFERDPTRRLGVVGN 244 (316)
T ss_pred cCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH----hCCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHH
Confidence 99999999999999999999999999997654433322222 23455566788899999999999999999998 58
Q ss_pred HhcCCCCCCC
Q 042809 224 LLNHTFISGN 233 (241)
Q Consensus 224 ~l~~p~~~~~ 233 (241)
++.||||+..
T Consensus 245 ~~~h~~f~~~ 254 (316)
T cd05620 245 IRGHPFFKTI 254 (316)
T ss_pred HHcCCCcCCC
Confidence 8899999774
No 51
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=7.4e-42 Score=272.05 Aligned_cols=229 Identities=24% Similarity=0.361 Sum_probs=171.4
Q ss_pred CCCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCccccc----------CCceeeeeecccCCCCHHHHHHHhCC
Q 042809 2 NKGTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGRN----------GEKTVNIFMEYMAGGSLLDVAEKFGG 67 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~----------~~~~~~lv~e~~~~~~L~~~l~~~~~ 67 (241)
|+.+|..||+|.+.. ......+.+|+.+++.++||||++. .....|+||||+. ++|.+++.. ..
T Consensus 21 ~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~-~~ 98 (338)
T cd07859 21 DTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELME-SDLHQVIKA-ND 98 (338)
T ss_pred ECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCC-CCHHHHHHh-cc
Confidence 577899999998763 2334568899999999999999871 1235899999995 699999886 45
Q ss_pred CCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCc
Q 042809 68 TLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141 (241)
Q Consensus 68 ~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aP 141 (241)
.+++..+..++.|+ ||++|++||||||+||+++.++.+||+|||++.......... .......|++.|+||
T Consensus 99 ~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~---~~~~~~~~t~~y~aP 175 (338)
T cd07859 99 DLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA---IFWTDYVATRWYRAP 175 (338)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCcc---ccccCCCCCCCcCCH
Confidence 67777777766654 799999999999999999999999999999987543211111 112234589999999
Q ss_pred ccccc--cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHH------------------------hcCCCCCC
Q 042809 142 EVLRN--EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIA------------------------CSNEKPHF 195 (241)
Q Consensus 142 E~~~~--~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------------------------~~~~~~~~ 195 (241)
|.+.+ ..++.++||||||+++|++++|+.||.+............. ........
T Consensus 176 E~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 255 (338)
T cd07859 176 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPF 255 (338)
T ss_pred HHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCch
Confidence 99876 56889999999999999999999999664322211111000 00000000
Q ss_pred ---ChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCc
Q 042809 196 ---PTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAK 235 (241)
Q Consensus 196 ---~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~ 235 (241)
.+..++.+.+++.+||+.+|.+|||++++++||||+....
T Consensus 256 ~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 256 SQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred HHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence 0124567899999999999999999999999999977555
No 52
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=6.1e-42 Score=271.30 Aligned_cols=224 Identities=27% Similarity=0.459 Sum_probs=177.8
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhc-CCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSL-NSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l-~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
++.+++.||+|.+... .....+..|..++..+ +||||++ .....+|+||||+++|+|.+++.. ...++
T Consensus 16 ~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~-~~~l~ 94 (329)
T cd05588 16 LKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQR-QRKLP 94 (329)
T ss_pred ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHH-cCCCC
Confidence 5678999999998743 2345678899999988 6999988 567889999999999999999876 45688
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+..+..++.|+ ||++|++||||||+||+++.++.++|+|||++...... ........|++.|+|||.+
T Consensus 95 ~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~------~~~~~~~~gt~~y~aPE~~ 168 (329)
T cd05588 95 EEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP------GDTTSTFCGTPNYIAPEIL 168 (329)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccC------CCccccccCCccccCHHHH
Confidence 88877776655 79999999999999999999999999999998632110 1112234689999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchh-----chHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKIS-----NAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 219 (241)
.+..++.++|+||||+++|++++|+.||..... ..................|..++..+.+++++||+.+|.+|+
T Consensus 169 ~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~ 248 (329)
T cd05588 169 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKASSVLKGFLNKDPKERL 248 (329)
T ss_pred cCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcC
Confidence 998899999999999999999999999953211 111112222222344456677888999999999999999998
Q ss_pred C------hHHHhcCCCCCC
Q 042809 220 S------AEELLNHTFISG 232 (241)
Q Consensus 220 s------~~~~l~~p~~~~ 232 (241)
| +++++.||||..
T Consensus 249 ~~~~~~~~~~i~~hp~~~~ 267 (329)
T cd05588 249 GCHPQTGFRDIKSHPFFRN 267 (329)
T ss_pred CCCCCCCHHHHhcCCCCCC
Confidence 7 789999999975
No 53
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.1e-41 Score=273.33 Aligned_cols=228 Identities=28% Similarity=0.427 Sum_probs=173.9
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+|+.||+|++... .....+.+|+.++.+++|+||++ .....+|+||||++||+|.+++.. ...+++
T Consensus 22 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~l~~ 100 (363)
T cd05628 22 KKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMK-KDTLTE 100 (363)
T ss_pred ECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHh-cCCCCH
Confidence 5678999999998743 23456788999999999999988 667789999999999999999987 456788
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCC----------------------
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNG---------------------- 123 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~---------------------- 123 (241)
..+..++.|+ ||++|++||||||+||+++.++.++|+|||++..........
T Consensus 101 ~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (363)
T cd05628 101 EETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKR 180 (363)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccccccccccccccccccccccc
Confidence 7777776654 799999999999999999999999999999987543211000
Q ss_pred -------ccccccccccCcccccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCC
Q 042809 124 -------NLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP 196 (241)
Q Consensus 124 -------~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (241)
..........||+.|+|||.+.+..++.++|+|||||++|+|++|..||.+........... .......++
T Consensus 181 ~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~--~~~~~~~~p 258 (363)
T cd05628 181 KAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVM--NWKETLIFP 258 (363)
T ss_pred ccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH--cCcCcccCC
Confidence 00001123568999999999999889999999999999999999999997654333222221 111122222
Q ss_pred --hhhHHHHHHHHHHhhccCCC---CCCChHHHhcCCCCCCC
Q 042809 197 --TQFFKKVLDFLAKCLERKPE---KRWSAEELLNHTFISGN 233 (241)
Q Consensus 197 --~~~~~~~~~li~~~l~~~p~---~Rps~~~~l~~p~~~~~ 233 (241)
...++++.+++.+++. +|. .||+++++++||||++.
T Consensus 259 ~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~ 299 (363)
T cd05628 259 PEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGV 299 (363)
T ss_pred CcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCC
Confidence 2356789999998664 344 46899999999999764
No 54
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=2.7e-42 Score=275.79 Aligned_cols=230 Identities=28% Similarity=0.478 Sum_probs=179.5
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+|+.||+|.+... .....+.+|+.++..+.||||++ ..++..|+||||+.+++|.+++... ..++.
T Consensus 22 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~ 100 (350)
T cd05573 22 DKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRK-DVFPE 100 (350)
T ss_pred ECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCCCCHHHHHHHc-CCCCH
Confidence 4568999999998743 23456889999999999999988 5778899999999999999999874 66788
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhccccc-----------------------C
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN-----------------------N 122 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-----------------------~ 122 (241)
..+..++.|+ ||+.|++||||||+||+++.++.++|+|||++........ .
T Consensus 101 ~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (350)
T cd05573 101 ETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDH 180 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccccccccccccccccccccccc
Confidence 7777776654 7999999999999999999999999999999876543210 0
Q ss_pred CccccccccccCcccccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHH
Q 042809 123 GNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKK 202 (241)
Q Consensus 123 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (241)
...........|++.|+|||.+.+..++.++|||||||++|+|++|+.||..........................++++
T Consensus 181 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~ 260 (350)
T cd05573 181 KQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPE 260 (350)
T ss_pred ccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHH
Confidence 00011223455899999999999999999999999999999999999999775433222222211011111122235889
Q ss_pred HHHHHHHhhccCCCCCCC-hHHHhcCCCCCCC
Q 042809 203 VLDFLAKCLERKPEKRWS-AEELLNHTFISGN 233 (241)
Q Consensus 203 ~~~li~~~l~~~p~~Rps-~~~~l~~p~~~~~ 233 (241)
+.++|.+||. +|.+||+ ++++++||||+..
T Consensus 261 ~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~ 291 (350)
T cd05573 261 AIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI 291 (350)
T ss_pred HHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence 9999999997 9999999 9999999999764
No 55
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.3e-41 Score=264.54 Aligned_cols=225 Identities=27% Similarity=0.454 Sum_probs=179.7
Q ss_pred CCCCCcEEEEEeccchH-----HHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC-CCCC
Q 042809 2 NKGTGALFVVKSAESEA-----GVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG-GTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~ 70 (241)
+..+++.||+|.+.... ....+.+|+.+++.++||||++ ..++.+++||||+++++|.+++.... ..++
T Consensus 21 ~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~ 100 (285)
T cd05605 21 VRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFD 100 (285)
T ss_pred EcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCC
Confidence 45678999999886432 2345678999999999999987 56678999999999999999887643 4577
Q ss_pred HHHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+..+..++.| +||+.|++|+||+|+||+++.++.++|+|||++...... .......|++.|+|||.+
T Consensus 101 ~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~-------~~~~~~~~~~~y~aPE~~ 173 (285)
T cd05605 101 EERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG-------ETIRGRVGTVGYMAPEVV 173 (285)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC-------CccccccCCCCccCcHHh
Confidence 7777666554 479999999999999999999999999999998654321 111234578999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC-----
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW----- 219 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp----- 219 (241)
.+..++.++|+||+|+++|++++|..||.+.....................+..++..+.+++.+||+.||.+||
T Consensus 174 ~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~ 253 (285)
T cd05605 174 KNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGE 253 (285)
T ss_pred cCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCC
Confidence 988899999999999999999999999987544333222222233344455667888999999999999999999
Q ss_pred ChHHHhcCCCCCCC
Q 042809 220 SAEELLNHTFISGN 233 (241)
Q Consensus 220 s~~~~l~~p~~~~~ 233 (241)
++++++.||||...
T Consensus 254 ~~~~l~~~~~~~~~ 267 (285)
T cd05605 254 GAEEVKAHPFFRTA 267 (285)
T ss_pred CHHHHhcCcCccCC
Confidence 89999999999864
No 56
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=3.7e-42 Score=276.36 Aligned_cols=228 Identities=27% Similarity=0.471 Sum_probs=176.5
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+|+.||||++... .....+.+|+.++..++||||++ ..+..+|+||||+.+|+|.+++.. ...+++
T Consensus 22 ~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~-~~~l~~ 100 (364)
T cd05599 22 KKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMK-KDTFTE 100 (364)
T ss_pred ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHH-cCCCCH
Confidence 5678999999998743 23455788999999999999988 678899999999999999999987 456788
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCcc--------------------
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNL-------------------- 125 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~-------------------- 125 (241)
..+..++.|+ ||++|++||||||+||+++.++.++|+|||++............
T Consensus 101 ~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (364)
T cd05599 101 EETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMS 180 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccccccccccccccccccccccccc
Confidence 8777776655 79999999999999999999999999999998654221100000
Q ss_pred ------------ccccccccCcccccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCC
Q 042809 126 ------------KQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP 193 (241)
Q Consensus 126 ------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 193 (241)
........||+.|+|||++.+..++.++|||||||++|+|++|..||............ .......
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i--~~~~~~~ 258 (364)
T cd05599 181 SKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKI--INWKETL 258 (364)
T ss_pred ccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHH--HcCCCcc
Confidence 00111245899999999999888999999999999999999999999765432222111 1111111
Q ss_pred CCC--hhhHHHHHHHHHHhhccCCCCCCC---hHHHhcCCCCCCC
Q 042809 194 HFP--TQFFKKVLDFLAKCLERKPEKRWS---AEELLNHTFISGN 233 (241)
Q Consensus 194 ~~~--~~~~~~~~~li~~~l~~~p~~Rps---~~~~l~~p~~~~~ 233 (241)
..+ ...++.+.++|++|+. +|.+|++ +++++.||||++.
T Consensus 259 ~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~ 302 (364)
T cd05599 259 QFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV 302 (364)
T ss_pred CCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 222 2457899999999996 8999997 9999999999764
No 57
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=7.1e-42 Score=275.99 Aligned_cols=229 Identities=24% Similarity=0.425 Sum_probs=173.5
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+++.||+|.+... .....+.+|+.+++.++||||++ ...+.+|+||||+++|+|.+++... ..+++
T Consensus 22 ~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-~~~~e 100 (381)
T cd05626 22 KVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRM-EVFPE 100 (381)
T ss_pred ECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhc-CCCCH
Confidence 5678999999998743 23456889999999999999998 6678899999999999999999873 56777
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCc---------------------
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGN--------------------- 124 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~--------------------- 124 (241)
..++.++.|+ ||+.|++||||||+||+++.++.++|+|||++...........
T Consensus 101 ~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (381)
T cd05626 101 VLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDV 180 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCcccccccc
Confidence 7766665544 7999999999999999999999999999998753211000000
Q ss_pred --------------------cccccccccCcccccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHH
Q 042809 125 --------------------LKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLL 184 (241)
Q Consensus 125 --------------------~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~ 184 (241)
.........||+.|+|||.+.+..++.++|||||||++|+|++|..||............
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i 260 (381)
T cd05626 181 SNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKV 260 (381)
T ss_pred cccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHH
Confidence 000012346899999999999888999999999999999999999999765433222111
Q ss_pred HHHhcCCCCCCC--hhhHHHHHHHHHHhh--ccCCCCCCChHHHhcCCCCCCC
Q 042809 185 KIACSNEKPHFP--TQFFKKVLDFLAKCL--ERKPEKRWSAEELLNHTFISGN 233 (241)
Q Consensus 185 ~~~~~~~~~~~~--~~~~~~~~~li~~~l--~~~p~~Rps~~~~l~~p~~~~~ 233 (241)
. ........+ ..+++++.+++.+|+ ..++..|+++++++.||||+..
T Consensus 261 ~--~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~ 311 (381)
T cd05626 261 I--NWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV 311 (381)
T ss_pred H--ccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence 1 111112222 346789999999954 5556669999999999999764
No 58
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.3e-41 Score=258.69 Aligned_cols=228 Identities=29% Similarity=0.470 Sum_probs=184.3
Q ss_pred CCCCCcEEEEEeccchH-----HHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHh-CCCCC
Q 042809 2 NKGTGALFVVKSAESEA-----GVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF-GGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~ 70 (241)
.++++..+|+|++.++. ...++..|-+||..++||-+.. +.+...|+|||||.||+|..+.+.+ +..++
T Consensus 98 l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fs 177 (459)
T KOG0610|consen 98 LRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFS 177 (459)
T ss_pred ecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccc
Confidence 35678999999988653 3456788999999999999977 7888999999999999999999986 45688
Q ss_pred HHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhccccc-----------------------
Q 042809 71 AGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKN----------------------- 121 (241)
Q Consensus 71 ~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~----------------------- 121 (241)
+..+++++. +|||-.|||+|||||+|||+-++|.+-|+||+++........
T Consensus 178 e~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~ 257 (459)
T KOG0610|consen 178 ESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSC 257 (459)
T ss_pred hhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccc
Confidence 888888765 568999999999999999999999999999998864311000
Q ss_pred -------C-C-------------------ccccccccccCcccccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCcc
Q 042809 122 -------N-G-------------------NLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGD 174 (241)
Q Consensus 122 -------~-~-------------------~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 174 (241)
. . ........+.||-.|+|||++.|...+.++|.|+||+++|||+.|..||.+
T Consensus 258 f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG 337 (459)
T KOG0610|consen 258 FSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKG 337 (459)
T ss_pred cccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCC
Confidence 0 0 000122356789999999999999999999999999999999999999998
Q ss_pred chhchHHHHHHHHhcCCCCCCC--hhhHHHHHHHHHHhhccCCCCCCC----hHHHhcCCCCCCC
Q 042809 175 KISNAAATLLKIACSNEKPHFP--TQFFKKVLDFLAKCLERKPEKRWS----AEELLNHTFISGN 233 (241)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rps----~~~~l~~p~~~~~ 233 (241)
...+.....+- ...+.+| +.++..+++||+++|.+||.+|.. ++||.+||||++.
T Consensus 338 ~~~~~Tl~NIv----~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gV 398 (459)
T KOG0610|consen 338 SNNKETLRNIV----GQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGV 398 (459)
T ss_pred CCchhhHHHHh----cCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCC
Confidence 75544332222 2233333 356789999999999999999997 9999999999874
No 59
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=2.2e-42 Score=274.14 Aligned_cols=226 Identities=29% Similarity=0.428 Sum_probs=176.5
Q ss_pred CCCCCcEEEEEeccchH-----HHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESEA-----GVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+|+.||+|.+.... ..+.+.+|+.+++.+.|+||++ ..+...++||||+++++|.+++......+++
T Consensus 22 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~ 101 (330)
T cd05601 22 EKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDE 101 (330)
T ss_pred ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCH
Confidence 56789999999987432 3456889999999999999988 5677899999999999999999986667888
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++.|+ ||+.|++||||||+||+++.++.++|+|||++........ .......|++.|+|||.+.
T Consensus 102 ~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~-----~~~~~~~gt~~y~aPE~~~ 176 (330)
T cd05601 102 DMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM-----VNSKLPVGTPDYIAPEVLT 176 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc-----eeeecccCCccccCHHHhc
Confidence 8877666554 7999999999999999999999999999999875432111 1112345899999999986
Q ss_pred ------ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC
Q 042809 146 ------NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219 (241)
Q Consensus 146 ------~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 219 (241)
+..++.++||||||+++|+|++|..||...........................+..+.+|+++||. +|.+||
T Consensus 177 ~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~ 255 (330)
T cd05601 177 TMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERL 255 (330)
T ss_pred cccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCC
Confidence 4456789999999999999999999997654333222111111111111223467889999999997 999999
Q ss_pred ChHHHhcCCCCCCC
Q 042809 220 SAEELLNHTFISGN 233 (241)
Q Consensus 220 s~~~~l~~p~~~~~ 233 (241)
|+++++.||||+..
T Consensus 256 t~~~l~~h~~~~~~ 269 (330)
T cd05601 256 GYEGLCCHPFFSKI 269 (330)
T ss_pred CHHHHhCCCCcCCC
Confidence 99999999999753
No 60
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.1e-42 Score=269.65 Aligned_cols=225 Identities=29% Similarity=0.443 Sum_probs=190.0
Q ss_pred CCCCCCcEEEEEecc----chHHHHHHHHHHHHHhhcCCCcccc-----cCCce-eeeeecccCCCCHHHHHHHhC-CCC
Q 042809 1 MNKGTGALFVVKSAE----SEAGVQALRNEAEIRQSLNSPNIGR-----NGEKT-VNIFMEYMAGGSLLDVAEKFG-GTL 69 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~----~~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~-~~lv~e~~~~~~L~~~l~~~~-~~~ 69 (241)
+++.+++.||+|.+. .+.......+|..++++++|||||. ..+++ ++|||+||+||+|.+.+.... .-+
T Consensus 24 rhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f 103 (426)
T KOG0589|consen 24 RHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLF 103 (426)
T ss_pred hhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccc
Confidence 467788999999977 3345567899999999999999998 44455 999999999999999998865 668
Q ss_pred CHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccc
Q 042809 70 DAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEV 143 (241)
Q Consensus 70 ~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~ 143 (241)
++..+..++.|+ ||+++++|||||+.|||++.++.++|+|||+++...... .......||+.|+.||+
T Consensus 104 ~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~------~~a~tvvGTp~YmcPEi 177 (426)
T KOG0589|consen 104 PEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED------SLASTVVGTPYYMCPEI 177 (426)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch------hhhheecCCCcccCHHH
Confidence 888877777665 799999999999999999999999999999999876521 12345779999999999
Q ss_pred ccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHH
Q 042809 144 LRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEE 223 (241)
Q Consensus 144 ~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ 223 (241)
+.+.+|..++|||||||++||+++-+.+|...+.. .+..........+.|..++.+++.+|+.|+.++|..||++.+
T Consensus 178 l~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~---~Li~ki~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~ 254 (426)
T KOG0589|consen 178 LSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS---ELILKINRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALE 254 (426)
T ss_pred hCCCCCCccCcchhhcchHHHHHhcccccCccchH---HHHHHHhhccCCCCCccccHHHHHHHHHHhhcCCccCCCHHH
Confidence 99999999999999999999999999999875433 333333344466778889999999999999999999999999
Q ss_pred HhcCCCCCCCC
Q 042809 224 LLNHTFISGNA 234 (241)
Q Consensus 224 ~l~~p~~~~~~ 234 (241)
+|.+|.+....
T Consensus 255 LL~~P~l~~~~ 265 (426)
T KOG0589|consen 255 LLRRPHLLRYL 265 (426)
T ss_pred HhhChhhhhHH
Confidence 99999876443
No 61
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2e-41 Score=265.67 Aligned_cols=226 Identities=25% Similarity=0.412 Sum_probs=169.8
Q ss_pred CCCCCcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 2 NKGTGALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
++.+|+.||+|.+... .....+.+|+.+++.++||||++ ..+...++||||+. ++|.+++......++...
T Consensus 26 ~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~ 104 (303)
T cd07869 26 SKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH-TDLCQYMDKHPGGLHPEN 104 (303)
T ss_pred ECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC-cCHHHHHHhCCCCCCHHH
Confidence 4568999999997732 22345778999999999999988 56778999999995 689888887666778877
Q ss_pred HHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc-
Q 042809 74 IRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN- 146 (241)
Q Consensus 74 ~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~- 146 (241)
+..++.|+ ||++|++||||||+||+++.++.+||+|||++...... ........+++.|+|||.+.+
T Consensus 105 ~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~ 178 (303)
T cd07869 105 VKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVP------SHTYSNEVVTLWYRPPDVLLGS 178 (303)
T ss_pred HHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCC------CccCCCCcccCCCCChHHHcCC
Confidence 77776655 79999999999999999999999999999998643221 111223457889999999865
Q ss_pred cCCCchhhHHHHHHHHHHHHhCCCCCccchhchH--HHHHHHHhcCC-------------CC-----CCCh---------
Q 042809 147 EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAA--ATLLKIACSNE-------------KP-----HFPT--------- 197 (241)
Q Consensus 147 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~-------------~~-----~~~~--------- 197 (241)
..++.++|+||+|+++|+|++|..||.+...... ........... .+ ..+.
T Consensus 179 ~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (303)
T cd07869 179 TEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKL 258 (303)
T ss_pred CCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhcc
Confidence 4578899999999999999999999976422111 11111000000 00 0000
Q ss_pred hhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCC
Q 042809 198 QFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNA 234 (241)
Q Consensus 198 ~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~ 234 (241)
..+..+.+|+.+||+.+|++|||++++++||||+...
T Consensus 259 ~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~ 295 (303)
T cd07869 259 SYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP 295 (303)
T ss_pred CCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence 1235788999999999999999999999999998654
No 62
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=2.7e-42 Score=278.21 Aligned_cols=230 Identities=23% Similarity=0.412 Sum_probs=174.6
Q ss_pred CCCCCcEEEEEeccchH-----HHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESEA-----GVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+|+.||+|.+.... ....+.+|++++.+++|+||++ ..++.+|+||||+++|+|.+++... ..+++
T Consensus 22 ~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~-~~~~~ 100 (376)
T cd05598 22 KVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRL-GIFEE 100 (376)
T ss_pred ECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhc-CCCCH
Confidence 56789999999987432 3456789999999999999988 6678999999999999999999873 56777
Q ss_pred HHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccC-----------------------
Q 042809 72 GVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN----------------------- 122 (241)
Q Consensus 72 ~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~----------------------- 122 (241)
..+..++.| +||++|++||||||+||+++.++.++|+|||++.........
T Consensus 101 ~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (376)
T cd05598 101 DLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEI 180 (376)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccccccccccccccccccccccc
Confidence 776666554 479999999999999999999999999999997532100000
Q ss_pred --------------CccccccccccCcccccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHh
Q 042809 123 --------------GNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIAC 188 (241)
Q Consensus 123 --------------~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~ 188 (241)
...........|++.|+|||.+.+..++.++|||||||++|+|++|..||.+..............
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~ 260 (376)
T cd05598 181 DRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWE 260 (376)
T ss_pred ccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccC
Confidence 000000113468999999999999889999999999999999999999997754333222211111
Q ss_pred cCCCCCCChhhHHHHHHHHHHhhccCCCCCC---ChHHHhcCCCCCCC
Q 042809 189 SNEKPHFPTQFFKKVLDFLAKCLERKPEKRW---SAEELLNHTFISGN 233 (241)
Q Consensus 189 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~~l~~p~~~~~ 233 (241)
..........++..+.+++.+|+ .+|.+|+ |+.+++.||||++.
T Consensus 261 ~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~ 307 (376)
T cd05598 261 TTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI 307 (376)
T ss_pred ccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence 11111122346788999999976 5999999 99999999999863
No 63
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1e-41 Score=269.22 Aligned_cols=220 Identities=25% Similarity=0.460 Sum_probs=175.9
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhc-CCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSL-NSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l-~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
++.+|+.||+|.+... .....+..|.+++..+ +||||++ ...+..|+||||+++++|..++.. ...++
T Consensus 16 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~-~~~~~ 94 (321)
T cd05591 16 LKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQR-SRKFD 94 (321)
T ss_pred ECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHH-cCCCC
Confidence 4678899999998743 2345577888888866 6999988 567789999999999999999986 35677
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+..+..++.|+ ||++|++||||||+||+++.++.++|+|||++....... .......|++.|+|||.+
T Consensus 95 ~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~------~~~~~~~gt~~y~aPE~~ 168 (321)
T cd05591 95 EPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG------VTTTTFCGTPDYIAPEIL 168 (321)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCC------ccccccccCccccCHHHH
Confidence 77766665544 799999999999999999999999999999986432110 112234589999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC-----
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW----- 219 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp----- 219 (241)
.+..++.++|+||||+++|+|++|+.||............. ......+...+.++.+++.+||+.+|.+||
T Consensus 169 ~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~----~~~~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~ 244 (321)
T cd05591 169 QELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESIL----HDDVLYPVWLSKEAVSILKAFMTKNPNKRLGCVAS 244 (321)
T ss_pred cCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHH----cCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCC
Confidence 99889999999999999999999999997654433322221 233345566788999999999999999999
Q ss_pred --ChHHHhcCCCCCC
Q 042809 220 --SAEELLNHTFISG 232 (241)
Q Consensus 220 --s~~~~l~~p~~~~ 232 (241)
+++++++||||..
T Consensus 245 ~~~~~~~~~hp~~~~ 259 (321)
T cd05591 245 QGGEDAIKQHPFFKE 259 (321)
T ss_pred CCCHHHHhcCCccCC
Confidence 9999999999965
No 64
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=9.6e-42 Score=270.11 Aligned_cols=225 Identities=28% Similarity=0.462 Sum_probs=176.6
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhc-CCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSL-NSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l-~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
++.+++.||+|.+... .....+.+|+.++.++ +||||++ ...+..++||||+++++|..++.. ...++
T Consensus 16 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~-~~~l~ 94 (329)
T cd05618 16 LKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR-QRKLP 94 (329)
T ss_pred ECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHH-cCCCC
Confidence 5678999999998743 3345677888888877 7999988 567789999999999999998876 45677
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+..+..++.|+ ||++|++||||||+||+++.++.++|+|||++...... ........|++.|+|||.+
T Consensus 95 ~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~------~~~~~~~~gt~~y~aPE~~ 168 (329)
T cd05618 95 EEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP------GDTTSTFCGTPNYIAPEIL 168 (329)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCC------CCccccccCCccccCHHHH
Confidence 77777666544 79999999999999999999999999999998642211 0112234689999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccch-----hchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKI-----SNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 219 (241)
.+..++.++|+||||+++|++++|..||.... ..................+|...+..+.+++++||+.+|.+||
T Consensus 169 ~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dP~~R~ 248 (329)
T cd05618 169 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERL 248 (329)
T ss_pred cCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHHHcC
Confidence 99889999999999999999999999995211 1111111222222344456777888999999999999999999
Q ss_pred C------hHHHhcCCCCCCC
Q 042809 220 S------AEELLNHTFISGN 233 (241)
Q Consensus 220 s------~~~~l~~p~~~~~ 233 (241)
| ++++++||||+..
T Consensus 249 ~~~~~~~~~~i~~hp~f~~~ 268 (329)
T cd05618 249 GCHPQTGFADIQGHPFFRNV 268 (329)
T ss_pred CCCCCCCHHHHhcCCCCCCC
Confidence 8 5899999999764
No 65
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.9e-41 Score=267.05 Aligned_cols=221 Identities=26% Similarity=0.466 Sum_probs=175.7
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhc-CCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSL-NSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l-~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
++.+++.||+|.+... .....+..|..++..+ .||||++ ...+.+++||||+++|+|.+++.. ...++
T Consensus 16 ~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~ 94 (316)
T cd05619 16 LKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQS-CHKFD 94 (316)
T ss_pred ECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCC
Confidence 5678999999998753 2345566777887764 8999988 567789999999999999999987 35567
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
...+..++.|+ ||+.|++||||||+||+++.++.++|+|||++...... ........|++.|+|||.+
T Consensus 95 ~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~gt~~y~aPE~~ 168 (316)
T cd05619 95 LPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG------DAKTCTFCGTPDYIAPEIL 168 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCC------CCceeeecCCccccCHHHH
Confidence 76666666544 79999999999999999999999999999998632110 0111234589999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChH-H
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAE-E 223 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~-~ 223 (241)
.+..++.++|+||+|+++|++++|..||............. ...+..+...+.++.+++.+||..+|.+||++. +
T Consensus 169 ~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~----~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~ 244 (316)
T cd05619 169 LGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIR----MDNPCYPRWLTREAKDILVKLFVREPERRLGVKGD 244 (316)
T ss_pred cCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHH----hCCCCCCccCCHHHHHHHHHHhccCHhhcCCChHH
Confidence 98889999999999999999999999997654433222222 223445666788999999999999999999996 8
Q ss_pred HhcCCCCCCC
Q 042809 224 LLNHTFISGN 233 (241)
Q Consensus 224 ~l~~p~~~~~ 233 (241)
+++||||+..
T Consensus 245 l~~h~~~~~~ 254 (316)
T cd05619 245 IRQHPFFREI 254 (316)
T ss_pred HHcCcccCCC
Confidence 9999999774
No 66
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.9e-41 Score=267.42 Aligned_cols=221 Identities=28% Similarity=0.474 Sum_probs=178.1
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhc-CCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSL-NSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l-~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
++.+++.||+|.+... .....+.+|.+++..+ +||||++ ...+.+|+||||+++++|..++.. ...++
T Consensus 16 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~l~ 94 (318)
T cd05570 16 LKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQR-SGRFD 94 (318)
T ss_pred ECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHH-cCCCC
Confidence 4678899999998743 2345677888998888 5999988 567789999999999999999887 35677
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+..+..++.|+ ||++|++||||+|+||+++.++.++|+|||++...... ........|++.|+|||.+
T Consensus 95 ~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~g~~~y~aPE~~ 168 (318)
T cd05570 95 EPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG------GVTTSTFCGTPDYIAPEIL 168 (318)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcC------CCcccceecCccccCHHHh
Confidence 77777666554 79999999999999999999999999999988532110 0111234588999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCCh---
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSA--- 221 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~--- 221 (241)
.+..++.++|+||||+++|++++|+.||............ .......+...+..+.+++++||..+|.+|||+
T Consensus 169 ~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i----~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~ 244 (318)
T cd05570 169 SYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSI----LEDEVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPT 244 (318)
T ss_pred cCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHH----HcCCCCCCCcCCHHHHHHHHHHccCCHHHcCCCCCC
Confidence 9999999999999999999999999999765433322221 123345566778899999999999999999999
Q ss_pred --HHHhcCCCCCCC
Q 042809 222 --EELLNHTFISGN 233 (241)
Q Consensus 222 --~~~l~~p~~~~~ 233 (241)
.+++.||||+..
T Consensus 245 ~~~~ll~~~~~~~~ 258 (318)
T cd05570 245 GEQDIKGHPFFREI 258 (318)
T ss_pred CHHHHhcCCCcCCC
Confidence 999999999774
No 67
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=9.3e-42 Score=274.02 Aligned_cols=223 Identities=24% Similarity=0.418 Sum_probs=173.4
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+|+.||+|.+... .....+.+|+.+++.++||||++ ..+..+|+||||++||+|.+++.. ..+++
T Consensus 64 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~--~~l~~ 141 (370)
T cd05596 64 HKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSN--YDIPE 141 (370)
T ss_pred ECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHh--cCCCH
Confidence 5678999999998642 23345788999999999999988 677889999999999999999976 34666
Q ss_pred HHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++. .+||+.|++||||||+||+++.++.+||+|||++....... ........|++.|+|||.+.
T Consensus 142 ~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~ 216 (370)
T cd05596 142 KWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANG-----MVRCDTAVGTPDYISPEVLK 216 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCC-----cccCCCCCCCcCeECHHHhc
Confidence 66665554 44899999999999999999999999999999987543211 01112346899999999986
Q ss_pred cc----CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCC--hhhHHHHHHHHHHhhccCCCC--
Q 042809 146 NE----GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP--TQFFKKVLDFLAKCLERKPEK-- 217 (241)
Q Consensus 146 ~~----~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~-- 217 (241)
+. .++.++|+|||||++|+|++|..||............ ........++ ..++.++.++|++||..+|.+
T Consensus 217 ~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i--~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~ 294 (370)
T cd05596 217 SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI--MDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLG 294 (370)
T ss_pred cCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHH--HcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccC
Confidence 53 3678999999999999999999999875443222221 1111122223 246789999999999999988
Q ss_pred CCChHHHhcCCCCCCC
Q 042809 218 RWSAEELLNHTFISGN 233 (241)
Q Consensus 218 Rps~~~~l~~p~~~~~ 233 (241)
|+|+++++.||||+..
T Consensus 295 R~s~~ell~h~~~~~~ 310 (370)
T cd05596 295 RNGVDEIKSHPFFKND 310 (370)
T ss_pred CCCHHHHhcCcccCCC
Confidence 9999999999999763
No 68
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=3.7e-42 Score=271.51 Aligned_cols=221 Identities=28% Similarity=0.474 Sum_probs=178.9
Q ss_pred CCCCCcEEEEEeccchH----HHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHH
Q 042809 2 NKGTGALFVVKSAESEA----GVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAG 72 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 72 (241)
++.+|+.||+|++.... ....+.+|++++.+++||||++ ..++..|+||||+++++|.+++.. ...+++.
T Consensus 20 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~ 98 (318)
T cd05582 20 GPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTEE 98 (318)
T ss_pred cCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHH-cCCCCHH
Confidence 35689999999987432 3445778999999999999988 567889999999999999999976 4567887
Q ss_pred HHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 73 VIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 73 ~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
.+..++.|+ ||+.|++||||+|+||+++.++.++|+|||++....... .......|++.|+|||.+.+
T Consensus 99 ~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~------~~~~~~~g~~~y~aPE~~~~ 172 (318)
T cd05582 99 DVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE------KKAYSFCGTVEYMAPEVVNR 172 (318)
T ss_pred HHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC------CceecccCChhhcCHHHHcC
Confidence 777776654 799999999999999999999999999999986543210 11223468999999999998
Q ss_pred cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCC-----h
Q 042809 147 EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWS-----A 221 (241)
Q Consensus 147 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps-----~ 221 (241)
..++.++|+||||+++|+|++|..||............. ......+...+..+.+++++||+.+|.+||| +
T Consensus 173 ~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~----~~~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~ 248 (318)
T cd05582 173 RGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMIL----KAKLGMPQFLSPEAQSLLRALFKRNPANRLGAGPDGV 248 (318)
T ss_pred CCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHH----cCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCH
Confidence 888999999999999999999999997654332222211 2334456667889999999999999999999 7
Q ss_pred HHHhcCCCCCCC
Q 042809 222 EELLNHTFISGN 233 (241)
Q Consensus 222 ~~~l~~p~~~~~ 233 (241)
++++.||||...
T Consensus 249 ~~~~~~~~~~~~ 260 (318)
T cd05582 249 EEIKRHPFFSTI 260 (318)
T ss_pred HHHhCCCCcCCC
Confidence 889999999753
No 69
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.1e-41 Score=266.79 Aligned_cols=221 Identities=30% Similarity=0.542 Sum_probs=176.0
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhc-CCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSL-NSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l-~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
++.+++.||+|.+..+ ...+.+..|..++..+ .||||++ .....+|+||||++||+|..++.. ...++
T Consensus 16 ~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~-~~~~~ 94 (316)
T cd05592 16 LKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQS-SGRFD 94 (316)
T ss_pred ECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHH-cCCCC
Confidence 4678999999998743 2334456677776654 7999988 567789999999999999999987 45677
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+..+..++.|+ ||+.|++||||||+||+++.++.++|+|||++....... .......|++.|+|||.+
T Consensus 95 ~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~------~~~~~~~gt~~y~aPE~~ 168 (316)
T cd05592 95 EARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE------GKASTFCGTPDYIAPEIL 168 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC------CccccccCCccccCHHHH
Confidence 77777766655 799999999999999999999999999999986432211 112334689999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChH-H
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAE-E 223 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~-~ 223 (241)
.+..++.++|+||||+++|+|++|..||.+.......... ....+.++...+.++.+++.+||+.+|.+||++. +
T Consensus 169 ~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i----~~~~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~ 244 (316)
T cd05592 169 KGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSI----LNDRPHFPRWISKEAKDCLSKLFERDPTKRLGVDGD 244 (316)
T ss_pred cCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHH----HcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHH
Confidence 9988999999999999999999999999875443322222 2344556777888999999999999999999875 8
Q ss_pred HhcCCCCCCC
Q 042809 224 LLNHTFISGN 233 (241)
Q Consensus 224 ~l~~p~~~~~ 233 (241)
++.||||+..
T Consensus 245 l~~h~~~~~~ 254 (316)
T cd05592 245 IRQHPFFRGI 254 (316)
T ss_pred HHcCcccCCC
Confidence 8899999764
No 70
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.9e-41 Score=268.05 Aligned_cols=220 Identities=28% Similarity=0.461 Sum_probs=174.9
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHH---hhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCC
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIR---QSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGT 68 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l---~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~ 68 (241)
++.+|+.||||.+... ...+.+.+|.+++ ..++||||++ ...+..|+||||+++++|..++.. ..
T Consensus 20 ~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~--~~ 97 (324)
T cd05589 20 YKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHT--DV 97 (324)
T ss_pred ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhhc--CC
Confidence 4678999999998743 2345566676655 5667999988 567889999999999999988865 56
Q ss_pred CCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcc
Q 042809 69 LDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPE 142 (241)
Q Consensus 69 ~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE 142 (241)
+++..+..++.|+ ||+.|++||||||+||+++.++.+||+|||++...... ........|++.|+|||
T Consensus 98 l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~------~~~~~~~~g~~~y~aPE 171 (324)
T cd05589 98 FSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF------GDRTSTFCGTPEFLAPE 171 (324)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC------CCcccccccCccccCHh
Confidence 7777777666654 79999999999999999999999999999988642211 11123456899999999
Q ss_pred cccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC---
Q 042809 143 VLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW--- 219 (241)
Q Consensus 143 ~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp--- 219 (241)
.+.+..++.++|+||||+++|++++|..||.+........... ......+..++..+.+++.+||+.+|.+||
T Consensus 172 ~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~----~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~ 247 (324)
T cd05589 172 VLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIV----NDEVRYPRFLSREAISIMRRLLRRNPERRLGSG 247 (324)
T ss_pred HhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHH----hCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCC
Confidence 9999889999999999999999999999997754433322221 223445667788999999999999999999
Q ss_pred --ChHHHhcCCCCCCC
Q 042809 220 --SAEELLNHTFISGN 233 (241)
Q Consensus 220 --s~~~~l~~p~~~~~ 233 (241)
++.++++||||+..
T Consensus 248 ~~~~~~l~~~~~f~~~ 263 (324)
T cd05589 248 EKDAEDVKKQPFFRDI 263 (324)
T ss_pred CCCHHHHhhCCCcCCC
Confidence 79999999999763
No 71
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2.6e-41 Score=267.26 Aligned_cols=221 Identities=24% Similarity=0.453 Sum_probs=176.5
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCc-ccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPN-IGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~-i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
++.+++.||+|++... ...+.+..|.+++..+.|++ |+. ...+.+|+||||+++|+|.+++.. ...++
T Consensus 21 ~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~-~~~~~ 99 (324)
T cd05587 21 RKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ-VGKFK 99 (324)
T ss_pred ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHH-cCCCC
Confidence 5678899999998743 34566788999999998765 544 567789999999999999999987 35677
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+..+..++.|+ ||++|++||||||+||+++.++.++|+|||++...... ........|++.|+|||.+
T Consensus 100 ~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~------~~~~~~~~gt~~y~aPE~~ 173 (324)
T cd05587 100 EPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG------GKTTRTFCGTPDYIAPEII 173 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC------CCceeeecCCccccChhhh
Confidence 77776666544 79999999999999999999999999999998532110 1112345689999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCCh---
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSA--- 221 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~--- 221 (241)
.+..++.++|+||+|+++|+|++|+.||.+.......... ......++...+..+.+++++||..+|.+|++.
T Consensus 174 ~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i----~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~ 249 (324)
T cd05587 174 AYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSI----MEHNVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPT 249 (324)
T ss_pred cCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH----HcCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCC
Confidence 9988999999999999999999999999765443332222 233455667788899999999999999999976
Q ss_pred --HHHhcCCCCCCC
Q 042809 222 --EELLNHTFISGN 233 (241)
Q Consensus 222 --~~~l~~p~~~~~ 233 (241)
+++++||||+..
T Consensus 250 ~~~~~~~hp~~~~~ 263 (324)
T cd05587 250 GERDIREHAFFRRI 263 (324)
T ss_pred CHHHHhcCCCcCCC
Confidence 899999999763
No 72
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.6e-41 Score=268.35 Aligned_cols=221 Identities=27% Similarity=0.430 Sum_probs=173.6
Q ss_pred CCCCCcEEEEEeccchH-----HHHHHHHHHH-HHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 2 NKGTGALFVVKSAESEA-----GVQALRNEAE-IRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~-----~~~~~~~e~~-~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
++.+|+.||+|.+.... ....+.+|.. +++.++||||++ ...+..|+||||+++|+|..++.. ...++
T Consensus 16 ~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~ 94 (323)
T cd05575 16 HKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQR-ERSFP 94 (323)
T ss_pred ECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHh-cCCCC
Confidence 56789999999987432 2234445544 467899999998 567789999999999999999986 45677
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+..+..++.|+ ||++|++||||||+||+++.++.+||+|||++...... ........|++.|+|||.+
T Consensus 95 ~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~gt~~y~aPE~~ 168 (323)
T cd05575 95 EPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH------SKTTSTFCGTPEYLAPEVL 168 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC------CCccccccCChhhcChhhh
Confidence 77776666544 79999999999999999999999999999998643211 1112234589999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCCh---
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSA--- 221 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~--- 221 (241)
.+..++.++|+||||+++|+|++|..||............. ......+...+..+.+++++||+.+|.+||++
T Consensus 169 ~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~----~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~ 244 (323)
T cd05575 169 RKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNIL----NKPLRLKPNISVSARHLLEGLLQKDRTKRLGAKDD 244 (323)
T ss_pred cCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHH----cCCCCCCCCCCHHHHHHHHHHhhcCHHhCCCCCCC
Confidence 99889999999999999999999999997654332222211 23334555678899999999999999999987
Q ss_pred -HHHhcCCCCCCC
Q 042809 222 -EELLNHTFISGN 233 (241)
Q Consensus 222 -~~~l~~p~~~~~ 233 (241)
.+++.||||...
T Consensus 245 ~~~il~~~~~~~~ 257 (323)
T cd05575 245 FLEIKNHVFFSSI 257 (323)
T ss_pred HHHHHcCCCcCCC
Confidence 699999999753
No 73
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.1e-41 Score=274.71 Aligned_cols=228 Identities=26% Similarity=0.454 Sum_probs=173.1
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+|+.||+|.+... ...+.+.+|++++.+++||||++ .....+|+||||+++|+|.+++.. ...+++
T Consensus 22 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~~ 100 (377)
T cd05629 22 KKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIK-YDTFSE 100 (377)
T ss_pred ECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHh-cCCCCH
Confidence 5678999999987642 23466889999999999999998 677889999999999999999986 356777
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCC---------ccc----------
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNG---------NLK---------- 126 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~---------~~~---------- 126 (241)
..++.++.|+ ||+.|++||||||+||+++.++.++|+|||++.......... ...
T Consensus 101 ~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (377)
T cd05629 101 DVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVA 180 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccccccccccccccccccccccccc
Confidence 7776666544 799999999999999999999999999999986321100000 000
Q ss_pred ----------------------cccccccCcccccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHH
Q 042809 127 ----------------------QSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLL 184 (241)
Q Consensus 127 ----------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~ 184 (241)
.......|++.|+|||.+.+..++.++|+|||||++|+|++|..||............
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i 260 (377)
T cd05629 181 VDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKI 260 (377)
T ss_pred cccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHH
Confidence 0001245899999999999888999999999999999999999999765432222211
Q ss_pred HHHhcCCCCCCCh--hhHHHHHHHHHHhhccCCCCC---CChHHHhcCCCCCCC
Q 042809 185 KIACSNEKPHFPT--QFFKKVLDFLAKCLERKPEKR---WSAEELLNHTFISGN 233 (241)
Q Consensus 185 ~~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~R---ps~~~~l~~p~~~~~ 233 (241)
. .......++. .++.++.+++.+||. +|.+| +|+.+++.||||++.
T Consensus 261 ~--~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~ 311 (377)
T cd05629 261 I--NWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGV 311 (377)
T ss_pred H--ccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 1 1111122222 467889999999997 67765 599999999999864
No 74
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.3e-41 Score=274.74 Aligned_cols=230 Identities=24% Similarity=0.418 Sum_probs=174.5
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+++.||+|.+... .....+.+|+.+++++.||||++ ..++.+|+||||+++|+|.+++... ..+++
T Consensus 22 ~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-~~~~e 100 (382)
T cd05625 22 KVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRM-GIFPE 100 (382)
T ss_pred ECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhc-CCCCH
Confidence 5678999999998743 23456889999999999999998 6677899999999999999999874 56777
Q ss_pred HHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCC----------------------
Q 042809 72 GVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNG---------------------- 123 (241)
Q Consensus 72 ~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~---------------------- 123 (241)
..++.++.| +||++|++||||||+||+++.+|.++|+|||++..........
T Consensus 101 ~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (382)
T cd05625 101 DLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDP 180 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccccccccccccccccccccccccccc
Confidence 777666654 4799999999999999999999999999999975321100000
Q ss_pred -------------------ccccccccccCcccccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHH
Q 042809 124 -------------------NLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLL 184 (241)
Q Consensus 124 -------------------~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~ 184 (241)
..........||+.|+|||.+.+..++.++||||+||++|+|++|+.||............
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i 260 (382)
T cd05625 181 ANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKV 260 (382)
T ss_pred ccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 0000012346899999999999988999999999999999999999999765432222211
Q ss_pred HHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCC---hHHHhcCCCCCCC
Q 042809 185 KIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWS---AEELLNHTFISGN 233 (241)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps---~~~~l~~p~~~~~ 233 (241)
..............+++++.+++.+|+ .+|.+|++ ++++++||||+..
T Consensus 261 ~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~ 311 (382)
T cd05625 261 INWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTI 311 (382)
T ss_pred HccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence 111111111222356788999999976 59999997 9999999999764
No 75
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=7.3e-41 Score=265.50 Aligned_cols=226 Identities=29% Similarity=0.462 Sum_probs=174.5
Q ss_pred CCCCCcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 2 NKGTGALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
++.+|..+|+|.+.. ......+.+|+++++.++||||++ ..++..++||||+.+++|.+++.. ...++...
T Consensus 26 ~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~ 104 (333)
T cd06650 26 HKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQI 104 (333)
T ss_pred ECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCCcHHHHHHH-cCCCCHHH
Confidence 456889999998763 344567899999999999999998 567789999999999999999987 34566766
Q ss_pred HHHHHHH------HhhcC-CccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 74 IRLYTKE------ILHGN-GILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 74 ~~~~~~~------~Lh~~-~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
+..++.+ +||+. +++|+||||+||+++.++.++|+|||++...... ......++..|+|||.+.+
T Consensus 105 ~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--------~~~~~~~~~~y~aPE~~~~ 176 (333)
T cd06650 105 LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--------MANSFVGTRSYMSPERLQG 176 (333)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh--------ccccCCCCccccCHHHhcC
Confidence 6655554 47974 7999999999999999999999999998654331 1122357889999999998
Q ss_pred cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHH-----------------------------------------
Q 042809 147 EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLK----------------------------------------- 185 (241)
Q Consensus 147 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~----------------------------------------- 185 (241)
..++.++|+||||+++|++++|+.||.............
T Consensus 177 ~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (333)
T cd06650 177 THYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLD 256 (333)
T ss_pred CCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHH
Confidence 889999999999999999999999997543322211110
Q ss_pred HHhcCCCCCCC-hhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCcc
Q 042809 186 IACSNEKPHFP-TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKK 236 (241)
Q Consensus 186 ~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~~ 236 (241)
.......+..+ ...+.++.+|+.+||+.+|.+|||+++++.||||+....+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~~~ 308 (333)
T cd06650 257 YIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSEAE 308 (333)
T ss_pred HHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCccc
Confidence 00011111111 1245688999999999999999999999999999876544
No 76
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.8e-42 Score=244.71 Aligned_cols=220 Identities=26% Similarity=0.465 Sum_probs=185.0
Q ss_pred CCCCCcEEEEEeccchH-----HHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHh-CCCCC
Q 042809 2 NKGTGALFVVKSAESEA-----GVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF-GGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~ 70 (241)
-++++-+||+|++.++. ...++.+|+++-..|+||||++ -+...+|+++||..+|+|...+.+. ...++
T Consensus 43 ekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~ 122 (281)
T KOG0580|consen 43 EKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFD 122 (281)
T ss_pred eccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEecCCchHHHHHHhccccccc
Confidence 46788899999987654 3456899999999999999998 6788999999999999999999954 34577
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+.....++.|+ +|.++++||||||+|++++..|.+|++|||++..... ......+||..|+|||..
T Consensus 123 e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~--------~kR~tlcgt~dyl~pEmv 194 (281)
T KOG0580|consen 123 EQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--------NKRKTLCGTLDYLPPEMV 194 (281)
T ss_pred ccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCC--------CCceeeecccccCCHhhc
Confidence 77666666654 7999999999999999999999999999999975433 233567899999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHH
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 224 (241)
.+..++...|+|++|++.||++.|.+||...........+. .....+|..++..+.++|.+|+.++|.+|.+..++
T Consensus 195 ~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~----k~~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v 270 (281)
T KOG0580|consen 195 EGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIR----KVDLKFPSTISGGAADLISRLLVKNPIERLALTEV 270 (281)
T ss_pred CCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHH----HccccCCcccChhHHHHHHHHhccCccccccHHHH
Confidence 99999999999999999999999999998765333322222 33445567888999999999999999999999999
Q ss_pred hcCCCCCCC
Q 042809 225 LNHTFISGN 233 (241)
Q Consensus 225 l~~p~~~~~ 233 (241)
+.|||+...
T Consensus 271 ~~hpwI~a~ 279 (281)
T KOG0580|consen 271 MDHPWIVAN 279 (281)
T ss_pred hhhHHHHhc
Confidence 999998654
No 77
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.8e-41 Score=271.03 Aligned_cols=223 Identities=25% Similarity=0.448 Sum_probs=172.3
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+++.||+|.+... .....+.+|+.+++.++||||++ ..+..+|+||||+++|+|.+++.. ..+++
T Consensus 64 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~--~~~~~ 141 (370)
T cd05621 64 HKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSN--YDVPE 141 (370)
T ss_pred ECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHh--cCCCH
Confidence 4678999999997642 23445789999999999999998 677889999999999999999976 34677
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++.|+ ||++|++||||||+||+++.++.+||+|||++....... ........|++.|+|||.+.
T Consensus 142 ~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~-----~~~~~~~~gt~~Y~aPE~~~ 216 (370)
T cd05621 142 KWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG-----MVRCDTAVGTPDYISPEVLK 216 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCC-----ceecccCCCCcccCCHHHHh
Confidence 6666666544 799999999999999999999999999999987543211 11123456899999999997
Q ss_pred cc----CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCC--hhhHHHHHHHHHHhhccCCCC--
Q 042809 146 NE----GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP--TQFFKKVLDFLAKCLERKPEK-- 217 (241)
Q Consensus 146 ~~----~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~-- 217 (241)
+. .++.++|+||+|+++|+|++|..||............ .........+ ..++..+.+++.+||..++.+
T Consensus 217 ~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i--~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~ 294 (370)
T cd05621 217 SQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKI--MDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLG 294 (370)
T ss_pred ccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHH--HhCCcccCCCCcccCCHHHHHHHHHHccCchhccC
Confidence 53 3678999999999999999999999765433222221 1112222233 345788999999999865543
Q ss_pred CCChHHHhcCCCCCCC
Q 042809 218 RWSAEELLNHTFISGN 233 (241)
Q Consensus 218 Rps~~~~l~~p~~~~~ 233 (241)
|+|++++++||||+..
T Consensus 295 R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 295 RNGVEEIKQHPFFKND 310 (370)
T ss_pred CCCHHHHhcCcccCCC
Confidence 8899999999999864
No 78
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=8.8e-41 Score=258.81 Aligned_cols=225 Identities=29% Similarity=0.453 Sum_probs=172.9
Q ss_pred CCCCCcEEEEEeccchH-----HHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC-CCCC
Q 042809 2 NKGTGALFVVKSAESEA-----GVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG-GTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~ 70 (241)
++.+|+.||+|.+.... ....+..|++++++++||||++ ..+...++||||++|++|.+++.... ..++
T Consensus 14 ~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~ 93 (277)
T cd05607 14 VKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLE 93 (277)
T ss_pred EccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCC
Confidence 46789999999886422 2344567999999999999988 56788999999999999999886533 3466
Q ss_pred HHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
...+..++. ++||+.|++||||+|+||+++.++.++|+|||++....... ......|+..|+|||.+
T Consensus 94 ~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~-------~~~~~~~~~~y~aPE~~ 166 (277)
T cd05607 94 MERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK-------TITQRAGTNGYMAPEIL 166 (277)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-------eeeccCCCCCccCHHHH
Confidence 666655554 44799999999999999999999999999999986543311 11234578899999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchH-HHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCCh--
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAA-ATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSA-- 221 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-- 221 (241)
.+..++.++|+||+|+++|++++|..||........ ..................++.++.+++++||+.+|.+||++
T Consensus 167 ~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~ 246 (277)
T cd05607 167 KEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSRE 246 (277)
T ss_pred ccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCcc
Confidence 888899999999999999999999999975432211 11222211112122223567889999999999999999999
Q ss_pred --HHHhcCCCCCCC
Q 042809 222 --EELLNHTFISGN 233 (241)
Q Consensus 222 --~~~l~~p~~~~~ 233 (241)
++++.||||+.-
T Consensus 247 ~~~~~~~h~~f~~~ 260 (277)
T cd05607 247 KNDDPRKHEFFKTI 260 (277)
T ss_pred chhhhhcChhhcCC
Confidence 678899999764
No 79
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=6.3e-41 Score=277.13 Aligned_cols=220 Identities=23% Similarity=0.340 Sum_probs=175.6
Q ss_pred CcEEEEEecc--chHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHh---CCCCCHHHHH
Q 042809 6 GALFVVKSAE--SEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF---GGTLDAGVIR 75 (241)
Q Consensus 6 ~~~vaiK~~~--~~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~ 75 (241)
+..||+|.+. .......+.+|+.+++.++||||++ ...+..|+||||+++|+|.+++... ..++++..+.
T Consensus 93 ~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~ 172 (478)
T PTZ00267 93 KEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVG 172 (478)
T ss_pred CeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHH
Confidence 6788888754 2334456788999999999999998 5678999999999999999988642 3457777776
Q ss_pred HHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCC
Q 042809 76 LYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGL 149 (241)
Q Consensus 76 ~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~ 149 (241)
.++.|+ ||+.|++||||||+||+++.++.+||+|||++........ ........|++.|+|||.+.+..+
T Consensus 173 ~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~ 248 (478)
T PTZ00267 173 LLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS----LDVASSFCGTPYYLAPELWERKRY 248 (478)
T ss_pred HHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc----cccccccCCCccccCHhHhCCCCC
Confidence 666554 7999999999999999999999999999999975533111 111234568999999999999889
Q ss_pred CchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCC
Q 042809 150 DFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTF 229 (241)
Q Consensus 150 ~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~ 229 (241)
+.++||||||+++|+|++|..||....... .......+.....+..++..+.++|.+||..+|.+|||+++++.|+|
T Consensus 249 ~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~---~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~ 325 (478)
T PTZ00267 249 SKKADMWSLGVILYELLTLHRPFKGPSQRE---IMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEF 325 (478)
T ss_pred CcHHhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHhCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHH
Confidence 999999999999999999999997654322 22222223334455667889999999999999999999999999999
Q ss_pred CCC
Q 042809 230 ISG 232 (241)
Q Consensus 230 ~~~ 232 (241)
++.
T Consensus 326 ~~~ 328 (478)
T PTZ00267 326 LKY 328 (478)
T ss_pred HHH
Confidence 853
No 80
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=6.7e-41 Score=265.15 Aligned_cols=225 Identities=27% Similarity=0.454 Sum_probs=178.1
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhc-CCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSL-NSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l-~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
++.+++.||+|++..+ ...+.+.+|+.++.++ .||||+. .....+|+||||+++++|..++.. ...++
T Consensus 16 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~l~ 94 (327)
T cd05617 16 LKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQR-QRKLP 94 (327)
T ss_pred ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCC
Confidence 4678899999998743 3345678999999888 5999987 567889999999999999998876 35688
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+..+..++.|+ ||++|++||||||+||+++.++.++|+|||++...... ........|++.|+|||.+
T Consensus 95 ~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~gt~~y~aPE~~ 168 (327)
T cd05617 95 EEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP------GDTTSTFCGTPNYIAPEIL 168 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCC------CCceecccCCcccCCHHHH
Confidence 88777776654 79999999999999999999999999999998642110 1112235689999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhc---hHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCC-
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISN---AAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWS- 220 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps- 220 (241)
.+..++.++|+||||+++|+|++|..||...... .................|...+..+.+++++||+.+|.+|++
T Consensus 169 ~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 169 RGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred CCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 9989999999999999999999999999532111 111222222233444567778889999999999999999997
Q ss_pred -----hHHHhcCCCCCCC
Q 042809 221 -----AEELLNHTFISGN 233 (241)
Q Consensus 221 -----~~~~l~~p~~~~~ 233 (241)
+++++.||||+..
T Consensus 249 ~~~~~~~~i~~h~~f~~~ 266 (327)
T cd05617 249 QPQTGFSDIKSHTFFRSI 266 (327)
T ss_pred CCCCCHHHHHcCCCCCCC
Confidence 5799999999764
No 81
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=7e-41 Score=260.37 Aligned_cols=225 Identities=28% Similarity=0.469 Sum_probs=176.0
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC-CCCC
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG-GTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~ 70 (241)
++.+++.||+|.+... .....+.+|+.++++++|++++. ..++..++||||+.+++|.+++.... ..++
T Consensus 21 ~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~ 100 (285)
T cd05630 21 VRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFE 100 (285)
T ss_pred EcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCC
Confidence 4678999999987642 22345778999999999999987 46678999999999999999986533 3577
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+..+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||++...... .......|+..|+|||.+
T Consensus 101 ~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~-------~~~~~~~g~~~y~aPE~~ 173 (285)
T cd05630 101 EGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG-------QTIKGRVGTVGYMAPEVV 173 (285)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC-------ccccCCCCCccccChHHH
Confidence 76666665544 79999999999999999999999999999988643321 111233588999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCC----
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWS---- 220 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps---- 220 (241)
.+..++.++|+||+|+++|++++|..||.......................+...+.++.+|+.+||+.+|.+|||
T Consensus 174 ~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~ 253 (285)
T cd05630 174 KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGG 253 (285)
T ss_pred cCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCC
Confidence 9888999999999999999999999999764332211111111112223345567788999999999999999999
Q ss_pred -hHHHhcCCCCCCC
Q 042809 221 -AEELLNHTFISGN 233 (241)
Q Consensus 221 -~~~~l~~p~~~~~ 233 (241)
+++++.||||+..
T Consensus 254 ~~~~~~~h~~~~~~ 267 (285)
T cd05630 254 GAREVKEHPLFKQI 267 (285)
T ss_pred chHHHHcChhhhcc
Confidence 8999999999864
No 82
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-42 Score=252.57 Aligned_cols=224 Identities=29% Similarity=0.419 Sum_probs=179.4
Q ss_pred CCCCCcEEEEEeccchHHHHHHHHHHHHHhhc-CCCcccc---------cCCceeeeeecccCCCCHHHHHHHhC-CCCC
Q 042809 2 NKGTGALFVVKSAESEAGVQALRNEAEIRQSL-NSPNIGR---------NGEKTVNIFMEYMAGGSLLDVAEKFG-GTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l-~h~~i~~---------~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~ 70 (241)
++.||..+|+|++.+. ...++|+++--.. .|||||. .+..++.+|||.|+||.|++.+++++ +.++
T Consensus 83 ~k~T~ekfALKvL~Ds---~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afT 159 (400)
T KOG0604|consen 83 HKRTQEKFALKVLLDS---PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFT 159 (400)
T ss_pred eccchhhhHHHHHhcC---HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccch
Confidence 5677888888877643 4467888875555 4999987 56778999999999999999999864 4688
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecC---CCeeecCCCcchhhcccccCCccccccccccCcccccCc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSH---GDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aP 141 (241)
+..+..+..|| ||+.+|.||||||+|+|++.+ ..+||+|||+++.... .......+-|+.|.||
T Consensus 160 Erea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~-------~~~L~TPc~TPyYvaP 232 (400)
T KOG0604|consen 160 EREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQE-------PGDLMTPCFTPYYVAP 232 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCC-------CccccCCcccccccCH
Confidence 88887777655 899999999999999999764 4599999999986543 2334456679999999
Q ss_pred ccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCC----hhhHHHHHHHHHHhhccCCCC
Q 042809 142 EVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP----TQFFKKVLDFLAKCLERKPEK 217 (241)
Q Consensus 142 E~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~ 217 (241)
|++-..+|+..+|+||+|+++|-|+.|.+||...-......-.+.........+| ..+++...++|+.+|..+|.+
T Consensus 233 evlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~Pte 312 (400)
T KOG0604|consen 233 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTE 312 (400)
T ss_pred HHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchh
Confidence 9999899999999999999999999999999765443333333333333444444 457789999999999999999
Q ss_pred CCChHHHhcCCCCCCCCc
Q 042809 218 RWSAEELLNHTFISGNAK 235 (241)
Q Consensus 218 Rps~~~~l~~p~~~~~~~ 235 (241)
|.|+++++.|||+.....
T Consensus 313 RlTI~~~m~hpwi~~~~~ 330 (400)
T KOG0604|consen 313 RLTIEEVMDHPWINQYEA 330 (400)
T ss_pred heeHHHhhcCchhccccc
Confidence 999999999999977654
No 83
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.4e-41 Score=271.12 Aligned_cols=228 Identities=28% Similarity=0.473 Sum_probs=175.3
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+|+.||+|.+... .....+.+|+.++..++||||++ .....+|+||||++||+|.+++.. ...+++
T Consensus 22 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~l~~ 100 (360)
T cd05627 22 KKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMK-KDTLSE 100 (360)
T ss_pred ECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHh-cCCCCH
Confidence 5678999999998742 23456788999999999999988 677889999999999999999986 456777
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCC----------------------
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNG---------------------- 123 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~---------------------- 123 (241)
..+..++.|+ ||++|++||||||+||+++.+|.++|+|||++..........
T Consensus 101 ~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (360)
T cd05627 101 EATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKR 180 (360)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCccccccccccccc
Confidence 7777766654 799999999999999999999999999999986442211000
Q ss_pred -------ccccccccccCcccccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCC
Q 042809 124 -------NLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP 196 (241)
Q Consensus 124 -------~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (241)
..........||+.|+|||++.+..++.++|+|||||++|+|++|..||.............. ......++
T Consensus 181 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~--~~~~~~~p 258 (360)
T cd05627 181 KAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMN--WKETLVFP 258 (360)
T ss_pred ccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHc--CCCceecC
Confidence 000011234689999999999999999999999999999999999999976544332222211 11112222
Q ss_pred h--hhHHHHHHHHHHhhccCCCCCC---ChHHHhcCCCCCCC
Q 042809 197 T--QFFKKVLDFLAKCLERKPEKRW---SAEELLNHTFISGN 233 (241)
Q Consensus 197 ~--~~~~~~~~li~~~l~~~p~~Rp---s~~~~l~~p~~~~~ 233 (241)
. ..+.++.++|.+|+ .+|.+|+ +++++++||||++.
T Consensus 259 ~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~ 299 (360)
T cd05627 259 PEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPFFEGV 299 (360)
T ss_pred CCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCCCCCCC
Confidence 2 35678999999977 4999998 58999999999864
No 84
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.4e-40 Score=267.08 Aligned_cols=222 Identities=25% Similarity=0.297 Sum_probs=167.7
Q ss_pred CCCCCcEEEEEeccchHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHH
Q 042809 2 NKGTGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRL 76 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 76 (241)
|+.+++.||+|... ...+.+|+.++++++||||++ ......++|+|++. ++|..++... ..++...+..
T Consensus 113 d~~~~~~vaiK~~~----~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~l~~~~~~~ 186 (391)
T PHA03212 113 DNKTCEHVVIKAGQ----RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLYCYLAAK-RNIAICDILA 186 (391)
T ss_pred ECCCCCEEEEechh----hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHHHHHHhc-CCCCHHHHHH
Confidence 67889999999755 345679999999999999998 45678999999995 6899988763 4567776666
Q ss_pred HHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCC
Q 042809 77 YTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLD 150 (241)
Q Consensus 77 ~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~ 150 (241)
++.|+ ||++|++||||||+||+++.++.++|+|||++........ .......||+.|+|||.+.+..++
T Consensus 187 i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~ 261 (391)
T PHA03212 187 IERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA-----NKYYGWAGTIATNAPELLARDPYG 261 (391)
T ss_pred HHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccc-----cccccccCccCCCChhhhcCCCCC
Confidence 65544 7999999999999999999999999999999864322111 112234689999999999998899
Q ss_pred chhhHHHHHHHHHHHHhCCCCCccchh--------chHHHHHHH----------------------Hh---cCCCCCCC-
Q 042809 151 FATDIWSLGCMVIEMATGRPPWGDKIS--------NAAATLLKI----------------------AC---SNEKPHFP- 196 (241)
Q Consensus 151 ~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~~----------------------~~---~~~~~~~~- 196 (241)
.++||||||+++|++++|..||..... .....+... .. .......+
T Consensus 262 ~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (391)
T PHA03212 262 PAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPL 341 (391)
T ss_pred cHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCC
Confidence 999999999999999999987643211 000000000 00 00000011
Q ss_pred ----hhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCC
Q 042809 197 ----TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNA 234 (241)
Q Consensus 197 ----~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~ 234 (241)
...+.++.+|+.+||+.+|.+|||++++++||||+.-.
T Consensus 342 ~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~ 383 (391)
T PHA03212 342 WTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIP 383 (391)
T ss_pred HHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCC
Confidence 12456889999999999999999999999999997744
No 85
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=3.6e-40 Score=253.51 Aligned_cols=223 Identities=39% Similarity=0.686 Sum_probs=176.9
Q ss_pred CCCCCcEEEEEeccch-------HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCC
Q 042809 2 NKGTGALFVVKSAESE-------AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-------~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~ 69 (241)
++.+|+.||+|.+... .....+.+|+.++++++||||++ ......++|+||+++++|.+++... ..+
T Consensus 23 ~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~-~~~ 101 (263)
T cd06625 23 DVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAY-GAL 101 (263)
T ss_pred EcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHh-CCC
Confidence 4678999999987632 12456889999999999999988 5667999999999999999999874 456
Q ss_pred CHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccc
Q 042809 70 DAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEV 143 (241)
Q Consensus 70 ~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~ 143 (241)
+......++.|+ ||+.|++|+||+|+||+++.++.++|+|||++.......... .......++..|+|||.
T Consensus 102 ~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~---~~~~~~~~~~~y~aPE~ 178 (263)
T cd06625 102 TETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSG---TGMKSVTGTPYWMSPEV 178 (263)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccccc---ccccCCCcCccccCcce
Confidence 666666555544 799999999999999999999999999999986543211100 11123446788999999
Q ss_pred ccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHH
Q 042809 144 LRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEE 223 (241)
Q Consensus 144 ~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ 223 (241)
+.+..++.++|+||+|+++|++++|+.||..... .............+..+...+..+.+++.+||..+|.+|||+.+
T Consensus 179 ~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 256 (263)
T cd06625 179 ISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA--MAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEE 256 (263)
T ss_pred eccCCCCchhhhHHHHHHHHHHHhCCCCccccch--HHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHH
Confidence 9988899999999999999999999999976422 22222333334445567778889999999999999999999999
Q ss_pred HhcCCCC
Q 042809 224 LLNHTFI 230 (241)
Q Consensus 224 ~l~~p~~ 230 (241)
++.||||
T Consensus 257 ll~~~~~ 263 (263)
T cd06625 257 LLRHFFV 263 (263)
T ss_pred HhhCCCC
Confidence 9999997
No 86
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=9.9e-41 Score=268.05 Aligned_cols=225 Identities=24% Similarity=0.394 Sum_probs=171.2
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+++.||+|.+... .....+.+|+.++..++||||++ ..+...|+||||+++|+|.+++.. ..++.
T Consensus 64 ~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~--~~~~~ 141 (371)
T cd05622 64 HKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN--YDVPE 141 (371)
T ss_pred ECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHh--cCCCH
Confidence 5678999999997632 23445788999999999999988 577889999999999999999976 34666
Q ss_pred HHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++.| +||++|++||||||+||+++.++.+||+|||++....... ........||+.|+|||.+.
T Consensus 142 ~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~-----~~~~~~~~gt~~y~aPE~l~ 216 (371)
T cd05622 142 KWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-----MVRCDTAVGTPDYISPEVLK 216 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCC-----cccccCcccCccccCHHHHh
Confidence 666655554 4799999999999999999999999999999987543211 01122456899999999997
Q ss_pred ccC----CCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCC--CC
Q 042809 146 NEG----LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEK--RW 219 (241)
Q Consensus 146 ~~~----~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--Rp 219 (241)
+.. ++.++|+||||+++|+|++|..||...........+..............++..+.++|.+||...+.+ |+
T Consensus 217 ~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~ 296 (371)
T cd05622 217 SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRN 296 (371)
T ss_pred ccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCC
Confidence 533 678999999999999999999999765433222222111111111223457889999999999854443 78
Q ss_pred ChHHHhcCCCCCCC
Q 042809 220 SAEELLNHTFISGN 233 (241)
Q Consensus 220 s~~~~l~~p~~~~~ 233 (241)
+++++++||||++.
T Consensus 297 ~~~ei~~h~~~~~~ 310 (371)
T cd05622 297 GVEEIKRHLFFKND 310 (371)
T ss_pred CHHHHhcCcccCCC
Confidence 99999999999764
No 87
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=4.2e-40 Score=253.70 Aligned_cols=225 Identities=32% Similarity=0.616 Sum_probs=177.0
Q ss_pred CCCCCcEEEEEeccch-----------HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHh
Q 042809 2 NKGTGALFVVKSAESE-----------AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF 65 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----------~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~ 65 (241)
++.+++.||+|.+... ...+.+.+|+.++++++||||++ ...+..++|+||+++++|.+++...
T Consensus 21 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 100 (267)
T cd06628 21 NASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNY 100 (267)
T ss_pred ecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHhc
Confidence 4567899999976521 22356889999999999999988 5677899999999999999999874
Q ss_pred CCCCCHHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCccccc
Q 042809 66 GGTLDAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWM 139 (241)
Q Consensus 66 ~~~~~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (241)
..++...+..++. ++||+.|++||||+|+||+++.++.++|+|||.+....................++..|+
T Consensus 101 -~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 179 (267)
T cd06628 101 -GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWM 179 (267)
T ss_pred -cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCcc
Confidence 5566666655555 447999999999999999999999999999999876543211111111122345788899
Q ss_pred CcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC
Q 042809 140 APEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219 (241)
Q Consensus 140 aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 219 (241)
|||.+.+..++.++|+||+|+++|++++|..||....... .. ........+..+...+..+.+++++||+.+|.+||
T Consensus 180 ~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 256 (267)
T cd06628 180 APEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ--AI-FKIGENASPEIPSNISSEAIDFLEKTFEIDHNKRP 256 (267)
T ss_pred ChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH--HH-HHHhccCCCcCCcccCHHHHHHHHHHccCCchhCc
Confidence 9999998888999999999999999999999997643322 11 12222344556677888999999999999999999
Q ss_pred ChHHHhcCCCC
Q 042809 220 SAEELLNHTFI 230 (241)
Q Consensus 220 s~~~~l~~p~~ 230 (241)
+++++++||||
T Consensus 257 ~~~~il~~~~~ 267 (267)
T cd06628 257 TAAELLKHPFL 267 (267)
T ss_pred CHHHHhhCCCC
Confidence 99999999997
No 88
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-42 Score=253.48 Aligned_cols=226 Identities=32% Similarity=0.551 Sum_probs=191.6
Q ss_pred CCCCCCcEEEEEeccchHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHH
Q 042809 1 MNKGTGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIR 75 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 75 (241)
+++.+|.++|||.+.-+...+++..|+.+|.+.+.|++|+ .....+|+|||||..|+.++.++-++.++.+..+.
T Consensus 53 IH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs 132 (502)
T KOG0574|consen 53 IHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEIS 132 (502)
T ss_pred HHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHH
Confidence 4789999999999999888999999999999999999999 55678999999999999999999988999988877
Q ss_pred HHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCC
Q 042809 76 LYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGL 149 (241)
Q Consensus 76 ~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~ 149 (241)
.+++ ||||...-+|||||..||+++.+|..||.|||.+....+-.. ....++||+.|+|||++..-.|
T Consensus 133 ~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMA------KRNTVIGTPFWMAPEVI~EIGY 206 (502)
T KOG0574|consen 133 AVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMA------KRNTVIGTPFWMAPEVIEEIGY 206 (502)
T ss_pred HHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHH------hhCccccCcccccHHHHHHhcc
Confidence 6654 789999999999999999999999999999999987655222 2245779999999999999899
Q ss_pred CchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCC--CChhhHHHHHHHHHHhhccCCCCCCChHHHhcC
Q 042809 150 DFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPH--FPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227 (241)
Q Consensus 150 ~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 227 (241)
...+||||||++..||..|++||.+- +....+.... ...++. .|...+.++-+++++||.++|++|-|+.++++|
T Consensus 207 ~~~ADIWSLGITaIEMAEG~PPYsDI--HPMRAIFMIP-T~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 207 DTKADIWSLGITAIEMAEGRPPYSDI--HPMRAIFMIP-TKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred chhhhHhhhcchhhhhhcCCCCcccc--cccceeEecc-CCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 99999999999999999999999762 2222222111 122222 345677899999999999999999999999999
Q ss_pred CCCCCCCc
Q 042809 228 TFISGNAK 235 (241)
Q Consensus 228 p~~~~~~~ 235 (241)
||++++..
T Consensus 284 ~FiknA~g 291 (502)
T KOG0574|consen 284 TFIKNAPG 291 (502)
T ss_pred hhhcCCCc
Confidence 99987653
No 89
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.5e-40 Score=255.53 Aligned_cols=227 Identities=30% Similarity=0.451 Sum_probs=180.5
Q ss_pred CCCCCcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHh--CCCCCH
Q 042809 2 NKGTGALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF--GGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~ 71 (241)
++.+|+.||+|.+.. +.....+.+|+.++++++||||++ ...+..++|+||+++++|..++... ...+++
T Consensus 22 ~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~ 101 (286)
T cd06622 22 HRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPE 101 (286)
T ss_pred EcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCH
Confidence 456899999998763 334567899999999999999988 5678999999999999999998763 236778
Q ss_pred HHHHHHHHHH------hhc-CCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 72 GVIRLYTKEI------LHG-NGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~-~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
..+..++.++ ||+ .|++|+||+|+||+++.++.++|+|||.+...... ......+++.|+|||.+
T Consensus 102 ~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--------~~~~~~~~~~y~aPE~~ 173 (286)
T cd06622 102 DVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS--------LAKTNIGCQSYMAPERI 173 (286)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC--------ccccCCCccCccCcchh
Confidence 7777766654 786 69999999999999999999999999998654321 11223467889999998
Q ss_pred cccC------CCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCC
Q 042809 145 RNEG------LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218 (241)
Q Consensus 145 ~~~~------~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 218 (241)
.+.. ++.++|+||+|+++|++++|..||....................+..+..++.++.+++.+||..+|.+|
T Consensus 174 ~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 253 (286)
T cd06622 174 KSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRR 253 (286)
T ss_pred cCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccC
Confidence 6543 4788999999999999999999997644433333333333445556677788999999999999999999
Q ss_pred CChHHHhcCCCCCCCCcc
Q 042809 219 WSAEELLNHTFISGNAKK 236 (241)
Q Consensus 219 ps~~~~l~~p~~~~~~~~ 236 (241)
|++++++.||||......
T Consensus 254 p~~~~l~~~~~~~~~~~~ 271 (286)
T cd06622 254 PTYAQLLEHPWLVKYKNA 271 (286)
T ss_pred CCHHHHhcChhhhhccCC
Confidence 999999999999776543
No 90
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=5.1e-40 Score=251.67 Aligned_cols=221 Identities=34% Similarity=0.543 Sum_probs=178.6
Q ss_pred CCCCcEEEEEeccchHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHH
Q 042809 3 KGTGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY 77 (241)
Q Consensus 3 ~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 77 (241)
+.+++.+++|.+......+.+.+|++++++++|+||++ ......|+++||+.+++|.+++...+..+++..+..+
T Consensus 25 ~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~ 104 (256)
T cd06612 25 KETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAI 104 (256)
T ss_pred cCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHH
Confidence 45689999999887666788999999999999999988 5668899999999999999999876677888887777
Q ss_pred HHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCc
Q 042809 78 TKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDF 151 (241)
Q Consensus 78 ~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ 151 (241)
+.|+ ||+.+++|+||+|+||+++.++.++|+|||.+........ ......++..|+|||.+.+..++.
T Consensus 105 ~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~ 178 (256)
T cd06612 105 LYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA------KRNTVIGTPFWMAPEVIQEIGYNN 178 (256)
T ss_pred HHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcc------ccccccCCccccCHHHHhcCCCCc
Confidence 6655 7999999999999999999999999999999876543111 112334688899999999888999
Q ss_pred hhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 152 ATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 152 ~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
++|+||+|+++|++++|..||............. .........+..++..+.+++.+||+.+|.+|||+.+++.||||
T Consensus 179 ~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 179 KADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIP-NKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred hhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhc-cCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 9999999999999999999997643322211111 01111122334566789999999999999999999999999997
No 91
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.9e-40 Score=259.76 Aligned_cols=227 Identities=24% Similarity=0.409 Sum_probs=173.4
Q ss_pred CCCCCcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 2 NKGTGALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
++.+++.||+|.+... .....+.+|+.++++++||||++ ..++..++||||++ ++|.+++...+..++...
T Consensus 27 ~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~ 105 (309)
T cd07872 27 SKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLD-KDLKQYMDDCGNIMSMHN 105 (309)
T ss_pred ecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCC-CCHHHHHHhcCCCCCHHH
Confidence 5678899999987632 22345778999999999999988 56778999999997 589998887666677777
Q ss_pred HHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc-
Q 042809 74 IRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN- 146 (241)
Q Consensus 74 ~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~- 146 (241)
+..++.|+ ||++|++||||+|+||+++.++.++|+|||++....... .......+++.|+|||.+.+
T Consensus 106 ~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~ 179 (309)
T cd07872 106 VKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT------KTYSNEVVTLWYRPPDVLLGS 179 (309)
T ss_pred HHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCc------cccccccccccccCCHHHhCC
Confidence 76666544 799999999999999999999999999999986432211 11122346889999999865
Q ss_pred cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCC-------------------CC-------CCChhhH
Q 042809 147 EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNE-------------------KP-------HFPTQFF 200 (241)
Q Consensus 147 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------------------~~-------~~~~~~~ 200 (241)
..++.++|+||+|+++|++++|+.||.+.+............... +. .....++
T Consensus 180 ~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (309)
T cd07872 180 SEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLD 259 (309)
T ss_pred CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCC
Confidence 457889999999999999999999997654433322221111000 00 0112356
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCc
Q 042809 201 KKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAK 235 (241)
Q Consensus 201 ~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~ 235 (241)
.++.+++.+||+.+|.+|||++++++||||+.-..
T Consensus 260 ~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~ 294 (309)
T cd07872 260 TEGIELLTKFLQYESKKRISAEEAMKHAYFRSLGT 294 (309)
T ss_pred HHHHHHHHHhccCChhhCCCHHHHhcChhhhhccc
Confidence 78899999999999999999999999999987543
No 92
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=9.5e-41 Score=264.19 Aligned_cols=221 Identities=24% Similarity=0.378 Sum_probs=173.2
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHH-HHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAE-IRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~-~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
++.+|+.||+|++... .....+.+|.. +++.++||||++ ..++..|+||||+.+++|..++.. ...++
T Consensus 16 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~ 94 (325)
T cd05604 16 RKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQR-ERSFP 94 (325)
T ss_pred ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHH-cCCCC
Confidence 5678999999998743 22344555554 467789999988 567889999999999999998876 45677
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+..+..++.|+ ||+.|++||||||+||+++.++.++|+|||++...... ........|++.|+|||.+
T Consensus 95 ~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~------~~~~~~~~gt~~y~aPE~~ 168 (325)
T cd05604 95 EPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ------SDTTTTFCGTPEYLAPEVI 168 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC------CCCcccccCChhhCCHHHH
Confidence 77777766654 79999999999999999999999999999998642211 0111234589999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCCh---
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSA--- 221 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~--- 221 (241)
.+..++.++|+||||+++|+|++|..||...+......... ......+...+..+.+++++||..+|.+||++
T Consensus 169 ~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~ 244 (325)
T cd05604 169 RKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNIL----HKPLVLRPGASLTAWSILEELLEKDRQRRLGAKED 244 (325)
T ss_pred cCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHH----cCCccCCCCCCHHHHHHHHHHhccCHHhcCCCCCC
Confidence 99889999999999999999999999997654333222111 22233445577889999999999999999976
Q ss_pred -HHHhcCCCCCCC
Q 042809 222 -EELLNHTFISGN 233 (241)
Q Consensus 222 -~~~l~~p~~~~~ 233 (241)
.+++.||||...
T Consensus 245 ~~~i~~h~~f~~~ 257 (325)
T cd05604 245 FLEIQEHPFFESL 257 (325)
T ss_pred HHHHhcCCCcCCC
Confidence 589999999763
No 93
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=4.1e-40 Score=260.26 Aligned_cols=221 Identities=24% Similarity=0.448 Sum_probs=175.3
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCC-Ccccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNS-PNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h-~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
++.+|+.||+|.+... ...+.+..|..++..+.| ++|+. ...+.+|+||||+++|+|.+++.. ...++
T Consensus 21 ~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~-~~~l~ 99 (323)
T cd05615 21 RKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQ-VGKFK 99 (323)
T ss_pred ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHH-cCCCC
Confidence 5678999999998743 234557788899888875 55554 566789999999999999999987 35677
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+..+..++.|+ ||++|++||||||+||+++.++.++|+|||++....... .......|++.|+|||.+
T Consensus 100 ~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~------~~~~~~~gt~~y~aPE~~ 173 (323)
T cd05615 100 EPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG------VTTRTFCGTPDYIAPEII 173 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCC------ccccCccCCccccCHHHH
Confidence 77777776654 799999999999999999999999999999986432110 112234589999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCC----
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWS---- 220 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps---- 220 (241)
.+..++.++|+||+|+++|+|++|..||.+........... ......+...+.++.+++.+||+.+|.+|++
T Consensus 174 ~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~----~~~~~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~ 249 (323)
T cd05615 174 AYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIM----EHNVSYPKSLSKEAVSICKGLMTKHPSKRLGCGPE 249 (323)
T ss_pred cCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH----hCCCCCCccCCHHHHHHHHHHcccCHhhCCCCCCC
Confidence 98889999999999999999999999997754433222221 2334456677889999999999999999997
Q ss_pred -hHHHhcCCCCCCC
Q 042809 221 -AEELLNHTFISGN 233 (241)
Q Consensus 221 -~~~~l~~p~~~~~ 233 (241)
.+++++||||+..
T Consensus 250 ~~~~i~~h~~f~~~ 263 (323)
T cd05615 250 GERDIREHAFFRRI 263 (323)
T ss_pred CHHHHhcCcccCCC
Confidence 4789999999864
No 94
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.5e-40 Score=261.57 Aligned_cols=221 Identities=24% Similarity=0.432 Sum_probs=175.0
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcC-CCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLN-SPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~-h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
++.+++.||+|.+... .....+..|..++..+. |++|+. ...+.+|+||||+++|+|.+++... ..++
T Consensus 21 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~-~~~~ 99 (323)
T cd05616 21 RKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQV-GRFK 99 (323)
T ss_pred ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHc-CCCC
Confidence 5678899999998743 22345677888887775 777765 5677899999999999999999863 5677
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+..+..++.|+ ||++|++||||||+||+++.++.++|+|||++...... ........|++.|+|||.+
T Consensus 100 ~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~------~~~~~~~~gt~~y~aPE~~ 173 (323)
T cd05616 100 EPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD------GVTTKTFCGTPDYIAPEII 173 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCC------CCccccCCCChhhcCHHHh
Confidence 77777666544 79999999999999999999999999999998643210 0112234689999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCCh---
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSA--- 221 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~--- 221 (241)
.+..++.++|+||||+++|+|++|+.||.+........... .....++...+.++.+++.+||+.+|.+|++.
T Consensus 174 ~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~----~~~~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~ 249 (323)
T cd05616 174 AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM----EHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPE 249 (323)
T ss_pred cCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHH----hCCCCCCCcCCHHHHHHHHHHcccCHHhcCCCCCC
Confidence 99999999999999999999999999997754433322222 23345667788899999999999999999974
Q ss_pred --HHHhcCCCCCCC
Q 042809 222 --EELLNHTFISGN 233 (241)
Q Consensus 222 --~~~l~~p~~~~~ 233 (241)
+++++||||+..
T Consensus 250 ~~~~i~~h~~~~~~ 263 (323)
T cd05616 250 GERDIKEHAFFRYI 263 (323)
T ss_pred CHHHHhcCCCcCCC
Confidence 899999999753
No 95
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.5e-39 Score=249.06 Aligned_cols=220 Identities=25% Similarity=0.408 Sum_probs=176.8
Q ss_pred CCCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHh-CCCCCH
Q 042809 2 NKGTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF-GGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~ 71 (241)
++.+|+.|++|.+.. ......+.+|+++++.++|||+++ ...+..++|+||+++++|.+++... ...++.
T Consensus 21 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 100 (256)
T cd08529 21 RKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPE 100 (256)
T ss_pred EcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCH
Confidence 456889999998762 345677899999999999999988 5667899999999999999999875 455666
Q ss_pred HHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++. .+||+.|++|+||+|+||+++.++.++|+|||++....... .......+++.|+|||.+.
T Consensus 101 ~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~ 174 (256)
T cd08529 101 DQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT------NFANTIVGTPYYLSPELCE 174 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc------chhhccccCccccCHHHhc
Confidence 66555554 44899999999999999999999999999999987543311 1112345788899999999
Q ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHh
Q 042809 146 NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225 (241)
Q Consensus 146 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l 225 (241)
+..++.++|+||||+++|++++|..||....... ..........+..+..++..+.+++.+||+.+|++||++.+++
T Consensus 175 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll 251 (256)
T cd08529 175 DKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA---LILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLL 251 (256)
T ss_pred CCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHh
Confidence 8888999999999999999999999997654222 2222223344445556778999999999999999999999999
Q ss_pred cCCCC
Q 042809 226 NHTFI 230 (241)
Q Consensus 226 ~~p~~ 230 (241)
+|||+
T Consensus 252 ~~~~~ 256 (256)
T cd08529 252 RNPSL 256 (256)
T ss_pred hCCCC
Confidence 99996
No 96
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=4.4e-40 Score=255.91 Aligned_cols=227 Identities=26% Similarity=0.433 Sum_probs=180.2
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC-CCCC
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG-GTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~ 70 (241)
+..+|+.||+|.+... .....+.+|+.+++.++|+||+. ..++..++|+||+.+++|.+++...+ ..++
T Consensus 21 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~ 100 (285)
T cd05632 21 VRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFE 100 (285)
T ss_pred ECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCC
Confidence 4568999999987643 22345788999999999999987 56778999999999999999887643 3577
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
...+..++.|+ ||+.|++||||+|+||+++.++.++|+|||++...... .......|+..|+|||.+
T Consensus 101 ~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~-------~~~~~~~g~~~~~aPE~~ 173 (285)
T cd05632 101 EERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG-------ESIRGRVGTVGYMAPEVL 173 (285)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC-------CcccCCCCCcCccChHHh
Confidence 87777766654 79999999999999999999999999999988643221 111234588999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCC----
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWS---- 220 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps---- 220 (241)
.+..++.++|+||+|+++|++++|..||.......................+...+..+.+|+.+||+.+|.+|||
T Consensus 174 ~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~ 253 (285)
T cd05632 174 NNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEE 253 (285)
T ss_pred cCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCccc
Confidence 9888999999999999999999999999765433222222222223333455667788999999999999999999
Q ss_pred -hHHHhcCCCCCCCCc
Q 042809 221 -AEELLNHTFISGNAK 235 (241)
Q Consensus 221 -~~~~l~~p~~~~~~~ 235 (241)
+.+++.|+||+....
T Consensus 254 ~~~~l~~~~~~~~~~~ 269 (285)
T cd05632 254 GAGEVKRHPFFRNMNF 269 (285)
T ss_pred ChHHHHcChhhhcCCH
Confidence 889999999987644
No 97
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=6.3e-40 Score=252.07 Aligned_cols=224 Identities=33% Similarity=0.550 Sum_probs=180.5
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+++.+|+|.+... ...+.+.+|+.+++.++||||++ ..+...++|+||+++++|.+++... ..++.
T Consensus 14 ~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~ 92 (262)
T cd05572 14 VKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDR-GLFDE 92 (262)
T ss_pred ECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhhc-CCCCH
Confidence 4567999999997632 34467899999999999999988 5677899999999999999999874 45676
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||.+....... ......++..|+|||.+.
T Consensus 93 ~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-------~~~~~~~~~~~~~PE~~~ 165 (262)
T cd05572 93 YTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-------KTWTFCGTPEYVAPEIIL 165 (262)
T ss_pred HHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-------ccccccCCcCccChhHhc
Confidence 6666655544 799999999999999999999999999999987654321 112335788899999998
Q ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCC-----
Q 042809 146 NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWS----- 220 (241)
Q Consensus 146 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----- 220 (241)
+..++.++|+||+|+++|++++|..||.....+.................+...+..+.+++.+||..+|.+|||
T Consensus 166 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~ 245 (262)
T cd05572 166 NKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGG 245 (262)
T ss_pred CCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccC
Confidence 888899999999999999999999999876532322222222223445556666889999999999999999999
Q ss_pred hHHHhcCCCCCCC
Q 042809 221 AEELLNHTFISGN 233 (241)
Q Consensus 221 ~~~~l~~p~~~~~ 233 (241)
++++++||||+.-
T Consensus 246 ~~~l~~~~~~~~~ 258 (262)
T cd05572 246 IKDIKKHKWFNGF 258 (262)
T ss_pred HHHHhcChhhhCC
Confidence 9999999999864
No 98
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.3e-41 Score=263.49 Aligned_cols=228 Identities=29% Similarity=0.471 Sum_probs=174.3
Q ss_pred CCCcEEEEEecc----chHHHHHHHHHHHHHhhcC-CCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 4 GTGALFVVKSAE----SEAGVQALRNEAEIRQSLN-SPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 4 ~~~~~vaiK~~~----~~~~~~~~~~e~~~l~~l~-h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
..+..||+|.+. .+.....+.+|+.+|.+|+ |.+||. ..++.+|+||||-+ .+|...|+..........
T Consensus 383 s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~Gd-~DL~kiL~k~~~~~~~~~ 461 (677)
T KOG0596|consen 383 SDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECGD-IDLNKILKKKKSIDPDWF 461 (677)
T ss_pred CCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeeccc-ccHHHHHHhccCCCchHH
Confidence 345667777644 4556778999999999998 999988 67899999999985 699999998766666567
Q ss_pred HHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccccc
Q 042809 74 IRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNE 147 (241)
Q Consensus 74 ~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~ 147 (241)
++.+..|+ +|+.||||.||||.|+++ -+|.+||+|||++..+.....+. .....+||+.|++||.+...
T Consensus 462 lk~ywkqML~aV~~IH~~gIVHSDLKPANFLl-VkG~LKLIDFGIA~aI~~DTTsI----~kdsQvGT~NYMsPEAl~~~ 536 (677)
T KOG0596|consen 462 LKFYWKQMLLAVKTIHQHGIVHSDLKPANFLL-VKGRLKLIDFGIANAIQPDTTSI----VKDSQVGTVNYMSPEALTDM 536 (677)
T ss_pred HHHHHHHHHHHHHHHHHhceeecCCCcccEEE-EeeeEEeeeechhcccCccccce----eeccccCcccccCHHHHhhc
Confidence 77777776 499999999999999999 78999999999998776643333 33567899999999998643
Q ss_pred C-----------CCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhH-HHHHHHHHHhhccCC
Q 042809 148 G-----------LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFF-KKVLDFLAKCLERKP 215 (241)
Q Consensus 148 ~-----------~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p 215 (241)
. .+.++|||||||+||+|+.|+.||..-.. ....+.......-.-++|..-+ .++.++++.||..||
T Consensus 537 ~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n-~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdP 615 (677)
T KOG0596|consen 537 SSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN-QIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDP 615 (677)
T ss_pred cccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH-HHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCc
Confidence 2 45789999999999999999999965321 1111111111111112332222 239999999999999
Q ss_pred CCCCChHHHhcCCCCCCCCccCC
Q 042809 216 EKRWSAEELLNHTFISGNAKKNS 238 (241)
Q Consensus 216 ~~Rps~~~~l~~p~~~~~~~~~~ 238 (241)
++|||+.++|+|||+.......+
T Consensus 616 kkR~si~eLLqhpFl~~~~i~~~ 638 (677)
T KOG0596|consen 616 KKRWSIPELLQHPFLQIQPIPVE 638 (677)
T ss_pred ccCCCcHHHhcCcccccccccch
Confidence 99999999999999988655443
No 99
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=4.5e-40 Score=272.41 Aligned_cols=224 Identities=21% Similarity=0.323 Sum_probs=178.0
Q ss_pred CCCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCcccccC-------------CceeeeeecccCCCCHHHHHHH
Q 042809 2 NKGTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGRNG-------------EKTVNIFMEYMAGGSLLDVAEK 64 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~-------------~~~~~lv~e~~~~~~L~~~l~~ 64 (241)
++.+|+.||||.+.. +.....+.+|+..+..++|+|+++.. ...+++||||+++|+|.+++..
T Consensus 53 ~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~ 132 (496)
T PTZ00283 53 RVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKS 132 (496)
T ss_pred EcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHH
Confidence 467899999999763 34456788999999999999998711 1147899999999999999975
Q ss_pred h---CCCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCc
Q 042809 65 F---GGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGT 135 (241)
Q Consensus 65 ~---~~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~ 135 (241)
. ...+++..+..++.|+ ||+.|++||||||+||+++.++.+||+|||++......... .......|+
T Consensus 133 ~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~----~~~~~~~Gt 208 (496)
T PTZ00283 133 RAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSD----DVGRTFCGT 208 (496)
T ss_pred hhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCeeccccccc----cccccccCC
Confidence 3 2457777766666544 79999999999999999999999999999998754331111 112235689
Q ss_pred ccccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCC
Q 042809 136 QLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKP 215 (241)
Q Consensus 136 ~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 215 (241)
+.|+|||.+.+..++.++||||||+++|++++|..||...... ..............+...++++.+++.+||+.+|
T Consensus 209 ~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 285 (496)
T PTZ00283 209 PYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENME---EVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDP 285 (496)
T ss_pred cceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH---HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCh
Confidence 9999999999988999999999999999999999999764332 2223333344445667788899999999999999
Q ss_pred CCCCChHHHhcCCCCCC
Q 042809 216 EKRWSAEELLNHTFISG 232 (241)
Q Consensus 216 ~~Rps~~~~l~~p~~~~ 232 (241)
.+|||+.++++|||++.
T Consensus 286 ~~RPs~~ell~~p~~~~ 302 (496)
T PTZ00283 286 KRRPSSSKLLNMPICKL 302 (496)
T ss_pred hhCcCHHHHHhCHHHHH
Confidence 99999999999999864
No 100
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-41 Score=270.77 Aligned_cols=231 Identities=35% Similarity=0.593 Sum_probs=195.5
Q ss_pred CCCCCCcEEEEEeccc--hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCC--CH
Q 042809 1 MNKGTGALFVVKSAES--EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL--DA 71 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~~--~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--~~ 71 (241)
+|..|...+|||.+.. ++..+-+..|+.+-+.|+|.|||+ ..++.+-++||-++||+|++++++..+++ .+
T Consensus 595 RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNE 674 (1226)
T KOG4279|consen 595 RDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNE 674 (1226)
T ss_pred ccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhccCCCccch
Confidence 5889999999998774 344566999999999999999998 56778889999999999999999988887 77
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeec-CCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGS-HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
..+-.+..|| ||++.|||||||.+|++++. .|.+||+|||-++......+ ....+.||..|+|||++
T Consensus 675 stm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP------~TETFTGTLQYMAPEvI 748 (1226)
T KOG4279|consen 675 STMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINP------CTETFTGTLQYMAPEVI 748 (1226)
T ss_pred hHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCc------cccccccchhhhChHhh
Confidence 8888888887 69999999999999999954 78999999999987644222 22456799999999999
Q ss_pred cc--cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChH
Q 042809 145 RN--EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAE 222 (241)
Q Consensus 145 ~~--~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 222 (241)
.. +.|..++|||||||++.||.||++||....... ..+.+......-|++|..++.+++++|.+|+..+|.+||++.
T Consensus 749 DqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq-AAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~ 827 (1226)
T KOG4279|consen 749 DQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ-AAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAK 827 (1226)
T ss_pred ccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh-HhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHH
Confidence 65 448899999999999999999999997654332 334455555667888999999999999999999999999999
Q ss_pred HHhcCCCCCCCCccCC
Q 042809 223 ELLNHTFISGNAKKNS 238 (241)
Q Consensus 223 ~~l~~p~~~~~~~~~~ 238 (241)
++|++||++...++.-
T Consensus 828 ~LL~DpFlq~~~kk~r 843 (1226)
T KOG4279|consen 828 DLLQDPFLQHNNKKPR 843 (1226)
T ss_pred HhccCcccccCCCCCC
Confidence 9999999988866543
No 101
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.9e-39 Score=248.64 Aligned_cols=220 Identities=29% Similarity=0.486 Sum_probs=175.5
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc------cCCceeeeeecccCCCCHHHHHHHh-CCCCC
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR------NGEKTVNIFMEYMAGGSLLDVAEKF-GGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~------~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~ 70 (241)
++.+++.+|+|.+... ...+.+.+|++++++++|+|+++ ..+..+++|+||+++++|.+++... ...++
T Consensus 21 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~ 100 (257)
T cd08223 21 HRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLP 100 (257)
T ss_pred EcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCC
Confidence 4667899999997632 34566889999999999999987 2344689999999999999999864 34577
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+..+..++.++ ||+.|++|+||+|+||+++.++.++|+|||++....... .......+++.|+|||.+
T Consensus 101 ~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~------~~~~~~~~~~~y~aPE~~ 174 (257)
T cd08223 101 ENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC------DMASTLIGTPYYMSPELF 174 (257)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccC------CccccccCCcCccChhHh
Confidence 77777666644 799999999999999999999999999999987543211 111234578899999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHH
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 224 (241)
.+..++.++|+||+|++++++++|..||...+.... ......+..+..+...+..+.+++.+||+.+|.+|||+.++
T Consensus 175 ~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~ 251 (257)
T cd08223 175 SNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSL---VYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSI 251 (257)
T ss_pred cCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH---HHHHHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHH
Confidence 988889999999999999999999999975433222 12222233445566778899999999999999999999999
Q ss_pred hcCCCC
Q 042809 225 LNHTFI 230 (241)
Q Consensus 225 l~~p~~ 230 (241)
+.||||
T Consensus 252 l~~~~~ 257 (257)
T cd08223 252 LRQPYI 257 (257)
T ss_pred hcCCCC
Confidence 999997
No 102
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=9.2e-40 Score=253.68 Aligned_cols=211 Identities=17% Similarity=0.185 Sum_probs=166.2
Q ss_pred CCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cC----CceeeeeecccCCCCHHHHHHHhCCCC
Q 042809 4 GTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NG----EKTVNIFMEYMAGGSLLDVAEKFGGTL 69 (241)
Q Consensus 4 ~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~ 69 (241)
.+|+.||+|.+... ...+.+.+|+.++.+++||||++ .. ...+++||||+++|+|.+++... ..+
T Consensus 41 ~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~~~ 119 (283)
T PHA02988 41 FNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKE-KDL 119 (283)
T ss_pred ECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhC-CCC
Confidence 36889999998742 22467889999999999999998 11 34689999999999999999874 456
Q ss_pred CHHHHHHHHH------HHhhc-CCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcc
Q 042809 70 DAGVIRLYTK------EILHG-NGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPE 142 (241)
Q Consensus 70 ~~~~~~~~~~------~~Lh~-~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE 142 (241)
+......++. .+||+ .+++||||+|+||+++.++.+||+|||++....... ....++..|+|||
T Consensus 120 ~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~---------~~~~~~~~y~aPE 190 (283)
T PHA02988 120 SFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP---------FKNVNFMVYFSYK 190 (283)
T ss_pred ChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc---------ccccCcccccCHH
Confidence 6655555544 34797 599999999999999999999999999987543211 1234788999999
Q ss_pred cccc--cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCC
Q 042809 143 VLRN--EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWS 220 (241)
Q Consensus 143 ~~~~--~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 220 (241)
.+.+ ..++.++||||||+++|++++|..||.+.......... ......+..+...+..+.+++.+||+.+|.+|||
T Consensus 191 ~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i--~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 268 (283)
T PHA02988 191 MLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLI--INKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPN 268 (283)
T ss_pred HhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHH--HhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcC
Confidence 9976 67899999999999999999999999875433322221 1223344556567889999999999999999999
Q ss_pred hHHHhc
Q 042809 221 AEELLN 226 (241)
Q Consensus 221 ~~~~l~ 226 (241)
++++++
T Consensus 269 ~~ell~ 274 (283)
T PHA02988 269 IKEILY 274 (283)
T ss_pred HHHHHH
Confidence 999985
No 103
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2.6e-40 Score=261.31 Aligned_cols=220 Identities=27% Similarity=0.428 Sum_probs=172.4
Q ss_pred CCCCCcEEEEEeccchH-----HHHHHHHHHH-HHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 2 NKGTGALFVVKSAESEA-----GVQALRNEAE-IRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~-----~~~~~~~e~~-~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
++.+|+.||+|.+.... ....+.+|.. +++.++||||++ ...+..|+||||+++++|..++.. ...+.
T Consensus 16 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~ 94 (321)
T cd05603 16 RKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQR-ERCFL 94 (321)
T ss_pred ECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHH-cCCCC
Confidence 56789999999987432 2334455544 578899999998 567789999999999999998876 45667
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+..+..++.|+ ||+.|++||||||+||+++.+|.+||+|||++....... .......|++.|+|||.+
T Consensus 95 ~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~gt~~y~aPE~~ 168 (321)
T cd05603 95 EPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE------ETTSTFCGTPEYLAPEVL 168 (321)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC------CccccccCCcccCCHHHh
Confidence 77666666544 799999999999999999999999999999986422111 111234589999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCCh---
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSA--- 221 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~--- 221 (241)
.+..++.++|+||||+++|+|++|..||...+....... ........+...+..+.+++.+||+.+|.+||++
T Consensus 169 ~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~----i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~ 244 (321)
T cd05603 169 RKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDN----ILHKPLQLPGGKTVAACDLLVGLLHKDQRRRLGAKAD 244 (321)
T ss_pred cCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHH----HhcCCCCCCCCCCHHHHHHHHHHccCCHhhcCCCCCC
Confidence 988899999999999999999999999977543222221 1233445566677899999999999999999975
Q ss_pred -HHHhcCCCCCC
Q 042809 222 -EELLNHTFISG 232 (241)
Q Consensus 222 -~~~l~~p~~~~ 232 (241)
.++++||||..
T Consensus 245 ~~~~~~~~~~~~ 256 (321)
T cd05603 245 FLEIKNHVFFSP 256 (321)
T ss_pred HHHHhCCCCcCC
Confidence 59999999975
No 104
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=3e-40 Score=270.32 Aligned_cols=222 Identities=24% Similarity=0.329 Sum_probs=164.7
Q ss_pred CCCCCcEEEEEeccchHHHHHHHHHHHHHhhcCCCccccc-------------CCceeeeeecccCCCCHHHHHHH---h
Q 042809 2 NKGTGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGRN-------------GEKTVNIFMEYMAGGSLLDVAEK---F 65 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~-------------~~~~~~lv~e~~~~~~L~~~l~~---~ 65 (241)
++.+++.||||.+.... ....+|+.+++.++||||++. ....+++||||++ ++|.+++.. .
T Consensus 87 ~~~~~~~vAiK~i~~~~--~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~-~~l~~~~~~~~~~ 163 (440)
T PTZ00036 87 CIDTSEKVAIKKVLQDP--QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIP-QTVHKYMKHYARN 163 (440)
T ss_pred ECCCCCEEEEEEEecCc--chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCC-ccHHHHHHHHhhc
Confidence 46789999999876432 234579999999999999871 1235779999997 588777754 2
Q ss_pred CCCCCHHHHHHHHHH------HhhcCCccccCCCCCcEEeecCC-CeeecCCCcchhhcccccCCccccccccccCcccc
Q 042809 66 GGTLDAGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHG-DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLW 138 (241)
Q Consensus 66 ~~~~~~~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (241)
...++...+..++.| +||++|++||||||+||+++.++ .+||+|||++....... ......+++.|
T Consensus 164 ~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~-------~~~~~~~t~~y 236 (440)
T PTZ00036 164 NHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQ-------RSVSYICSRFY 236 (440)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCC-------CcccCCCCcCc
Confidence 456777777666554 48999999999999999998665 69999999997543311 11234578999
Q ss_pred cCccccccc-CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcC-----------------CC--------
Q 042809 139 MAPEVLRNE-GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN-----------------EK-------- 192 (241)
Q Consensus 139 ~aPE~~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----------------~~-------- 192 (241)
+|||.+.+. .++.++|||||||++|+|++|.+||.+................ .+
T Consensus 237 ~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~ 316 (440)
T PTZ00036 237 RAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLK 316 (440)
T ss_pred cCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHH
Confidence 999998764 6899999999999999999999999765332221111111000 00
Q ss_pred CCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCC
Q 042809 193 PHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233 (241)
Q Consensus 193 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~ 233 (241)
..++...+.++.+|+.+||..+|.+|||+.++++||||+.-
T Consensus 317 ~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~ 357 (440)
T PTZ00036 317 KVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDL 357 (440)
T ss_pred HHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhh
Confidence 01223356789999999999999999999999999999754
No 105
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.5e-40 Score=261.76 Aligned_cols=220 Identities=25% Similarity=0.418 Sum_probs=171.2
Q ss_pred CCCCCcEEEEEeccchH-----HHHHHHHHH-HHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 2 NKGTGALFVVKSAESEA-----GVQALRNEA-EIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~-----~~~~~~~e~-~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
++.+++.||+|++.... ....+..|. .+++.++||||++ ...+..|+||||+++++|.+++.. ...+.
T Consensus 16 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~ 94 (325)
T cd05602 16 HKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQR-ERCFL 94 (325)
T ss_pred ECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHh-cCCCC
Confidence 56788999999987432 222344444 4567789999988 567889999999999999999987 34566
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+..+..++.|+ ||++|++||||||+||+++.++.++|+|||++...... ........|++.|+|||.+
T Consensus 95 ~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~------~~~~~~~~gt~~y~aPE~~ 168 (325)
T cd05602 95 EPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH------NGTTSTFCGTPEYLAPEVL 168 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccC------CCCcccccCCccccCHHHH
Confidence 66666655544 79999999999999999999999999999998643221 1112344689999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChH--
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAE-- 222 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~-- 222 (241)
.+..++.++||||||+++|+|++|..||............. ......+...+..+.+++++||+.+|.+|+++.
T Consensus 169 ~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~----~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~ 244 (325)
T cd05602 169 HKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL----NKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDD 244 (325)
T ss_pred cCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHH----hCCcCCCCCCCHHHHHHHHHHcccCHHHCCCCCCC
Confidence 99889999999999999999999999997654333222221 223344556788999999999999999999876
Q ss_pred --HHhcCCCCCC
Q 042809 223 --ELLNHTFISG 232 (241)
Q Consensus 223 --~~l~~p~~~~ 232 (241)
++++|+||..
T Consensus 245 ~~~i~~~~~~~~ 256 (325)
T cd05602 245 FMEIKNHIFFSP 256 (325)
T ss_pred HHHHhcCcccCC
Confidence 8999999965
No 106
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.2e-39 Score=250.97 Aligned_cols=224 Identities=33% Similarity=0.541 Sum_probs=179.5
Q ss_pred CCCCCcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 2 NKGTGALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
++.+++.+++|.+... .....+.+|+++++++.||||++ ......++|+||+.+++|.+++......++...
T Consensus 22 ~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 101 (265)
T cd06605 22 HRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERI 101 (265)
T ss_pred EcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHH
Confidence 4568999999987643 44567889999999999999987 567889999999999999999987556777777
Q ss_pred HHHHHHHH------hhc-CCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 74 IRLYTKEI------LHG-NGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 74 ~~~~~~~~------Lh~-~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
+..++.|+ ||+ .|++|+||+|+||+++.++.++|+|||.+........ ....++..|+|||.+.+
T Consensus 102 ~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~--------~~~~~~~~y~~PE~~~~ 173 (265)
T cd06605 102 LGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA--------KTFVGTSSYMAPERIQG 173 (265)
T ss_pred HHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh--------hcccCChhccCHHHHcC
Confidence 76665544 799 9999999999999999999999999999875533111 11457888999999998
Q ss_pred cCCCchhhHHHHHHHHHHHHhCCCCCccch--hchHHHHHHHHhcCCCCCCChh-hHHHHHHHHHHhhccCCCCCCChHH
Q 042809 147 EGLDFATDIWSLGCMVIEMATGRPPWGDKI--SNAAATLLKIACSNEKPHFPTQ-FFKKVLDFLAKCLERKPEKRWSAEE 223 (241)
Q Consensus 147 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~~p~~Rps~~~ 223 (241)
..++.++|+||||+++|++++|..||.... ................+..+.. ++..+.++|.+||..+|.+|||+.+
T Consensus 174 ~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 253 (265)
T cd06605 174 NDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKE 253 (265)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHH
Confidence 889999999999999999999999996542 1222223333333334444444 7788999999999999999999999
Q ss_pred HhcCCCCCCC
Q 042809 224 LLNHTFISGN 233 (241)
Q Consensus 224 ~l~~p~~~~~ 233 (241)
++.||||+..
T Consensus 254 ll~~~~~~~~ 263 (265)
T cd06605 254 LLEHPFIKKY 263 (265)
T ss_pred HhhCchhhcc
Confidence 9999999753
No 107
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=6.9e-40 Score=259.52 Aligned_cols=233 Identities=24% Similarity=0.349 Sum_probs=171.0
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHh-CCCCCH
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF-GGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~ 71 (241)
++.+|+.||+|.+..+ ...+.+.+|+.+++.++||||++ ..++..++|+||+++++|.+++... ...+++
T Consensus 21 ~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~ 100 (327)
T cd08227 21 YKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSE 100 (327)
T ss_pred ecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCH
Confidence 5788999999998743 33456788999999999999988 5677899999999999999999764 344777
Q ss_pred HHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCcc-ccccccccCcccccCcccc
Q 042809 72 GVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNL-KQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 72 ~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aPE~~ 144 (241)
..+..++.| +||++|++||||||+||+++.++.++++||+.............. ........++..|+|||.+
T Consensus 101 ~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 180 (327)
T cd08227 101 LAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVL 180 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHh
Confidence 776666654 479999999999999999999999999999865443221110000 0001122456779999999
Q ss_pred cc--cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcC--------------------------------
Q 042809 145 RN--EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN-------------------------------- 190 (241)
Q Consensus 145 ~~--~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------------------------------- 190 (241)
.+ ..++.++||||||+++|++++|..||..................
T Consensus 181 ~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (327)
T cd08227 181 QQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTV 260 (327)
T ss_pred hcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCccccc
Confidence 76 45889999999999999999999999753322111110000000
Q ss_pred ----------CCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCC
Q 042809 191 ----------EKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNA 234 (241)
Q Consensus 191 ----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~ 234 (241)
........+++.+.+++.+||+.||.+|||++++++||||+...
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~ 314 (327)
T cd08227 261 STPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 314 (327)
T ss_pred CCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcc
Confidence 00011123456899999999999999999999999999997644
No 108
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=9.2e-40 Score=263.05 Aligned_cols=225 Identities=23% Similarity=0.347 Sum_probs=170.3
Q ss_pred CCCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCcccc-----cCCc-----eeeeeecccCCCCHHHHHHHhCC
Q 042809 2 NKGTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGR-----NGEK-----TVNIFMEYMAGGSLLDVAEKFGG 67 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~-----~~~lv~e~~~~~~L~~~l~~~~~ 67 (241)
|+.+|+.||+|.+.. ....+.+.+|+++++.++|+||++ .... ..|+|+||+. ++|.+++.. ..
T Consensus 21 ~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~ 98 (372)
T cd07853 21 DPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQ-SDLHKIIVS-PQ 98 (372)
T ss_pred ECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEeeccc-cCHHHHHhc-CC
Confidence 567899999998753 234567889999999999999988 2222 7899999996 688888875 45
Q ss_pred CCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCc
Q 042809 68 TLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141 (241)
Q Consensus 68 ~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aP 141 (241)
.++...+..++.|+ ||+.|++||||||+||+++.++.++|+|||++....... ........+++.|+||
T Consensus 99 ~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~-----~~~~~~~~~~~~y~aP 173 (372)
T cd07853 99 PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE-----SKHMTQEVVTQYYRAP 173 (372)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCc-----cccCCCCCcCCCcCCH
Confidence 67777777766654 799999999999999999999999999999987543211 1111223468889999
Q ss_pred cccccc-CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHH----------------------hcCCCC-----
Q 042809 142 EVLRNE-GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIA----------------------CSNEKP----- 193 (241)
Q Consensus 142 E~~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~----------------------~~~~~~----- 193 (241)
|.+.+. .++.++||||+||++|+|++|+.||.+.........+... .....+
T Consensus 174 E~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (372)
T cd07853 174 EILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVL 253 (372)
T ss_pred HHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHh
Confidence 999874 4788999999999999999999999764332221111110 000011
Q ss_pred -CCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCC
Q 042809 194 -HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233 (241)
Q Consensus 194 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~ 233 (241)
......++.+.+|+.+||+.||.+|||+.++++||||++.
T Consensus 254 ~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 294 (372)
T cd07853 254 YTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG 294 (372)
T ss_pred cccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence 1223346789999999999999999999999999999874
No 109
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.4e-41 Score=255.24 Aligned_cols=224 Identities=29% Similarity=0.438 Sum_probs=173.1
Q ss_pred CCCCcEEEEEeccchHHHHHHHHHHHHHhhcCCCcccc---------cC-CceeeeeecccCCCCHHHHHHHh---CCCC
Q 042809 3 KGTGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR---------NG-EKTVNIFMEYMAGGSLLDVAEKF---GGTL 69 (241)
Q Consensus 3 ~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~---------~~-~~~~~lv~e~~~~~~L~~~l~~~---~~~~ 69 (241)
..+++.||||..-.+.. .-.+|+.+|+.+.|||||+ .. .-++.+|||||+ .+|..+++.. +..+
T Consensus 46 ~e~~~~vAIKKv~~d~r--~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP-~tL~~~~r~~~~~~~~m 122 (364)
T KOG0658|consen 46 RETEEEVAIKKVLQDKR--YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMP-ETLYRVIRHYTRANQRM 122 (364)
T ss_pred cCCCceeEEEEecCCCC--cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhch-HHHHHHHHHHhhcCCCC
Confidence 35688999998664331 2347899999999999998 22 336789999997 5999999853 5667
Q ss_pred CHHHHHHHHHHH------hhcCCccccCCCCCcEEeecC-CCeeecCCCcchhhcccccCCccccccccccCcccccCcc
Q 042809 70 DAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSH-GDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPE 142 (241)
Q Consensus 70 ~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE 142 (241)
+...++.+..|+ ||+.|++||||||.|+++|.+ |.+||||||.|+.......+ .+..-++.|+|||
T Consensus 123 p~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epn-------iSYicSRyYRaPE 195 (364)
T KOG0658|consen 123 PLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPN-------ISYICSRYYRAPE 195 (364)
T ss_pred ceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCCc-------eeEEEeccccCHH
Confidence 777777777665 799999999999999999986 89999999999977653322 2233588999999
Q ss_pred cccc-cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCC----------------C---------CCC
Q 042809 143 VLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEK----------------P---------HFP 196 (241)
Q Consensus 143 ~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----------------~---------~~~ 196 (241)
.+.| ..|+.+.||||.||++.||+-|++.|.+.........+....+... + -+.
T Consensus 196 Lifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~ 275 (364)
T KOG0658|consen 196 LIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFF 275 (364)
T ss_pred HHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecc
Confidence 9987 5589999999999999999999999988544433322222211100 0 123
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCcc
Q 042809 197 TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKK 236 (241)
Q Consensus 197 ~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~~ 236 (241)
...+++..+|+.++|..+|.+|.++.+++.||||+.-...
T Consensus 276 ~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 276 KRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred cCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 4466899999999999999999999999999999876554
No 110
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=7.5e-40 Score=262.42 Aligned_cols=220 Identities=26% Similarity=0.329 Sum_probs=163.6
Q ss_pred CCCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCcccc-----c------CCceeeeeecccCCCCHHHHHHHhC
Q 042809 2 NKGTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGR-----N------GEKTVNIFMEYMAGGSLLDVAEKFG 66 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~-----~------~~~~~~lv~e~~~~~~L~~~l~~~~ 66 (241)
|+.+|+.||+|.+.. ......+.+|+.+++.++||||++ . ....+|+||||+++ +|...+..
T Consensus 42 ~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~-- 118 (359)
T cd07876 42 DTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIHM-- 118 (359)
T ss_pred EcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCCc-CHHHHHhc--
Confidence 567899999999763 234567889999999999999987 1 11357999999964 67776643
Q ss_pred CCCCHHHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccC
Q 042809 67 GTLDAGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMA 140 (241)
Q Consensus 67 ~~~~~~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 140 (241)
.++...+..++.| +||++|++||||||+||+++.++.++|+|||++...... .......+++.|+|
T Consensus 119 -~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~-------~~~~~~~~t~~y~a 190 (359)
T cd07876 119 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN-------FMMTPYVVTRYYRA 190 (359)
T ss_pred -cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccC-------ccCCCCcccCCCCC
Confidence 3566665555554 479999999999999999999999999999998643221 11122457889999
Q ss_pred cccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHH------------------hcCCCCC--------
Q 042809 141 PEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIA------------------CSNEKPH-------- 194 (241)
Q Consensus 141 PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------------------~~~~~~~-------- 194 (241)
||.+.+..++.++||||||+++|+|++|+.||.+.+........... .....+.
T Consensus 191 PE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (359)
T cd07876 191 PEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEE 270 (359)
T ss_pred chhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhh
Confidence 99999989999999999999999999999999764322111000000 0000000
Q ss_pred ------------CChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCC
Q 042809 195 ------------FPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISG 232 (241)
Q Consensus 195 ------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~ 232 (241)
.....+..+.+|+.+||..+|++|||++++++||||+.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 271 LFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV 320 (359)
T ss_pred hccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence 11123467899999999999999999999999999864
No 111
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.5e-39 Score=252.54 Aligned_cols=228 Identities=34% Similarity=0.555 Sum_probs=177.7
Q ss_pred CCCCCcEEEEEeccc--hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHH
Q 042809 2 NKGTGALFVVKSAES--EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI 74 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~--~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 74 (241)
++.++..+++|.+.. ....+.+.+|+++++.++|||+++ ......++|+||+++++|..++.....++++..+
T Consensus 26 ~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~ 105 (282)
T cd06643 26 NKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQI 105 (282)
T ss_pred ECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHH
Confidence 456788999998763 345677889999999999999988 5667899999999999999988765567788877
Q ss_pred HHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc---
Q 042809 75 RLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR--- 145 (241)
Q Consensus 75 ~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~--- 145 (241)
..++.|+ ||+.|++||||+|+||+++.++.++|+|||++....... .......++..|+|||.+.
T Consensus 106 ~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~ 179 (282)
T cd06643 106 RVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI------QRRDSFIGTPYWMAPEVVMCET 179 (282)
T ss_pred HHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEccccccccccccc------cccccccccccccCHhhccccC
Confidence 7766654 799999999999999999999999999999986443211 1112345788999999984
Q ss_pred --ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHH
Q 042809 146 --NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEE 223 (241)
Q Consensus 146 --~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ 223 (241)
+..++.++|+||+|+++|++++|..||............. .........+..++..+.+++.+||+.+|.+|||+++
T Consensus 180 ~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 258 (282)
T cd06643 180 SKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIA-KSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQ 258 (282)
T ss_pred CCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHh-hcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHH
Confidence 3456789999999999999999999997643222111111 1111122334557789999999999999999999999
Q ss_pred HhcCCCCCCCCcc
Q 042809 224 LLNHTFISGNAKK 236 (241)
Q Consensus 224 ~l~~p~~~~~~~~ 236 (241)
+++||||+.....
T Consensus 259 il~~~~~~~~~~~ 271 (282)
T cd06643 259 LLQHPFVTVNSNK 271 (282)
T ss_pred HhcCCCEeccCCC
Confidence 9999999876544
No 112
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.5e-39 Score=252.29 Aligned_cols=225 Identities=32% Similarity=0.528 Sum_probs=178.5
Q ss_pred CCCCCcEEEEEeccc--hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHH
Q 042809 2 NKGTGALFVVKSAES--EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI 74 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~--~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 74 (241)
++.++..+|+|.+.. ....+.+.+|++++++++||||++ ..+...|+||||+++++|.+++...+..+++..+
T Consensus 26 ~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~ 105 (280)
T cd06611 26 HKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQI 105 (280)
T ss_pred EcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHH
Confidence 346789999999763 345567889999999999999988 5677899999999999999999886667888888
Q ss_pred HHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc---
Q 042809 75 RLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR--- 145 (241)
Q Consensus 75 ~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~--- 145 (241)
..++.|+ ||+.|++|+||+|+||+++.++.++|+|||.+....... .......+++.|+|||.+.
T Consensus 106 ~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~ 179 (280)
T cd06611 106 RYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL------QKRDTFIGTPYWMAPEVVACET 179 (280)
T ss_pred HHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccc------cccceeecchhhcCHHHHhhcc
Confidence 8777654 799999999999999999999999999999876543211 1112345788899999974
Q ss_pred --ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCC--CCChhhHHHHHHHHHHhhccCCCCCCCh
Q 042809 146 --NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP--HFPTQFFKKVLDFLAKCLERKPEKRWSA 221 (241)
Q Consensus 146 --~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~ 221 (241)
+..++.++|+||||+++|++++|..||......... ........+ ..+...+.++.+++.+||..+|.+|||+
T Consensus 180 ~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~ 256 (280)
T cd06611 180 FKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVL---LKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTA 256 (280)
T ss_pred cCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHH---HHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCH
Confidence 344677899999999999999999999765332221 111222222 2344567889999999999999999999
Q ss_pred HHHhcCCCCCCCCc
Q 042809 222 EELLNHTFISGNAK 235 (241)
Q Consensus 222 ~~~l~~p~~~~~~~ 235 (241)
+++++||||+....
T Consensus 257 ~~il~~~~~~~~~~ 270 (280)
T cd06611 257 AELLKHPFVSDQSD 270 (280)
T ss_pred HHHhcChhhcccch
Confidence 99999999987643
No 113
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.1e-40 Score=275.08 Aligned_cols=214 Identities=23% Similarity=0.395 Sum_probs=177.4
Q ss_pred CCcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCC---------
Q 042809 5 TGALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGG--------- 67 (241)
Q Consensus 5 ~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~--------- 67 (241)
....||||.+++. .....|++|++++..++|||||+ ..++.+|+|+|||.+|+|..||..+..
T Consensus 515 ~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~ 594 (774)
T KOG1026|consen 515 DEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQ 594 (774)
T ss_pred cceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCC
Confidence 4567999998853 35678999999999999999999 788899999999999999999987532
Q ss_pred C----CCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCccc
Q 042809 68 T----LDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL 137 (241)
Q Consensus 68 ~----~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (241)
. ++......++.|| |-++.+|||||-.+||+|+.+-.|||+|||+++.+-. .+..+......-+.+
T Consensus 595 ~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYs----sDYYk~~~~t~lPIR 670 (774)
T KOG1026|consen 595 DTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYS----SDYYKVRGNTLLPIR 670 (774)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhh----hhhhcccCCceeeee
Confidence 2 6677777777766 7899999999999999999999999999999975422 111111112234678
Q ss_pred ccCcccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCC
Q 042809 138 WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPE 216 (241)
Q Consensus 138 ~~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 216 (241)
|||||.+..++|+.++||||+||++||+++ |..||.+...+...+.++ .+.....|...|..+++|+..||+.+|+
T Consensus 671 WMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~---~g~lL~~Pe~CP~~vY~LM~~CW~~~P~ 747 (774)
T KOG1026|consen 671 WMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIR---AGQLLSCPENCPTEVYSLMLECWNENPK 747 (774)
T ss_pred cCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHH---cCCcccCCCCCCHHHHHHHHHHhhcCcc
Confidence 999999999999999999999999999999 999998876665554444 3444777888999999999999999999
Q ss_pred CCCChHHHh
Q 042809 217 KRWSAEELL 225 (241)
Q Consensus 217 ~Rps~~~~l 225 (241)
+|||+++|-
T Consensus 748 ~RPsF~eI~ 756 (774)
T KOG1026|consen 748 RRPSFKEIH 756 (774)
T ss_pred cCCCHHHHH
Confidence 999999974
No 114
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=3.2e-39 Score=248.58 Aligned_cols=225 Identities=40% Similarity=0.663 Sum_probs=175.3
Q ss_pred CCCcEEEEEeccc--------hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 4 GTGALFVVKSAES--------EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 4 ~~~~~vaiK~~~~--------~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
.+|..+|+|.+.. ......+.+|++++++++|+||++ ...+..++|+||+++++|.+++... ..++
T Consensus 22 ~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~ 100 (265)
T cd06631 22 NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRF-GPLP 100 (265)
T ss_pred cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHhc-CCCC
Confidence 4678899997652 223456889999999999999988 5668899999999999999999874 4567
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
...+..++.|+ ||+.+++|+||+|+||+++.++.++|+|||.+....................++..|+|||.+
T Consensus 101 ~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 180 (265)
T cd06631 101 EPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVI 180 (265)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhh
Confidence 77766665544 799999999999999999999999999999987543211111111122234578899999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHH
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 224 (241)
.+..++.++|+||||+++|++++|..||.......... .........+..+..++..+.+++++||..+|.+|||++++
T Consensus 181 ~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~ 259 (265)
T cd06631 181 NESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMF-YIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQL 259 (265)
T ss_pred cCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHH-HhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHH
Confidence 98888999999999999999999999997543222111 11111123345666788899999999999999999999999
Q ss_pred hcCCCC
Q 042809 225 LNHTFI 230 (241)
Q Consensus 225 l~~p~~ 230 (241)
+.||||
T Consensus 260 l~~~~~ 265 (265)
T cd06631 260 LRHDFL 265 (265)
T ss_pred hcCCCC
Confidence 999997
No 115
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.5e-39 Score=251.59 Aligned_cols=224 Identities=36% Similarity=0.598 Sum_probs=179.6
Q ss_pred CCCCCcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 2 NKGTGALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
+..+|..||+|.+... .....+.+|+.+++.++|+||++ ..+...|+|+||+.+++|.+++... +++...
T Consensus 22 ~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~--~~~~~~ 99 (274)
T cd06609 22 DKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG--KLDETY 99 (274)
T ss_pred ECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhc--CCCHHH
Confidence 4568999999997632 33466889999999999999988 5667899999999999999999863 677777
Q ss_pred HHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccccc
Q 042809 74 IRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNE 147 (241)
Q Consensus 74 ~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~ 147 (241)
+..++.|+ ||+.+++|+||+|+||+++.++.++|+|||.+....... .......+++.|+|||.+.+.
T Consensus 100 ~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~ 173 (274)
T cd06609 100 IAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM------SKRNTFVGTPFWMAPEVIKQS 173 (274)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccc------cccccccCCccccChhhhccC
Confidence 77766655 799999999999999999999999999999987654321 111234477889999999988
Q ss_pred CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChh-hHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 148 GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQ-FFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 148 ~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
.++.++|+||||+++|++++|..||........ .........+..+.. .+..+.+++.+||..+|.+|||+++++.
T Consensus 174 ~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 174 GYDEKADIWSLGITAIELAKGEPPLSDLHPMRV---LFLIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCcccCchHHH---HHHhhhcCCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 899999999999999999999999975432221 111222333333333 7788999999999999999999999999
Q ss_pred CCCCCCCCcc
Q 042809 227 HTFISGNAKK 236 (241)
Q Consensus 227 ~p~~~~~~~~ 236 (241)
||||+....+
T Consensus 251 ~~~~~~~~~~ 260 (274)
T cd06609 251 HKFIKKAKKT 260 (274)
T ss_pred ChhhcCCCcc
Confidence 9999886554
No 116
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.2e-39 Score=254.09 Aligned_cols=218 Identities=26% Similarity=0.372 Sum_probs=163.3
Q ss_pred CCcEEEEEeccch----HHHHHHHHHHHHHhhc---CCCcccc----------cCCceeeeeecccCCCCHHHHHHHhC-
Q 042809 5 TGALFVVKSAESE----AGVQALRNEAEIRQSL---NSPNIGR----------NGEKTVNIFMEYMAGGSLLDVAEKFG- 66 (241)
Q Consensus 5 ~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l---~h~~i~~----------~~~~~~~lv~e~~~~~~L~~~l~~~~- 66 (241)
+|..||+|.+... .....+.+|+.+++.+ .||||++ .....+++|+||+. ++|.+++....
T Consensus 26 ~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~ 104 (290)
T cd07862 26 GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPE 104 (290)
T ss_pred CCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEEccCC-CCHHHHHHhCCC
Confidence 4688999987632 1233456777777665 6999987 13456899999996 69999987642
Q ss_pred CCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccC
Q 042809 67 GTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMA 140 (241)
Q Consensus 67 ~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 140 (241)
..+++..+..++.|+ ||++|++||||||+||+++.++.++|+|||++...... .......|++.|+|
T Consensus 105 ~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-------~~~~~~~~~~~y~a 177 (290)
T cd07862 105 PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-------MALTSVVVTLWYRA 177 (290)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCC-------cccccccccccccC
Confidence 346777776666654 79999999999999999999999999999998654321 11223457899999
Q ss_pred cccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcC-CCC----------------------CCCh
Q 042809 141 PEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN-EKP----------------------HFPT 197 (241)
Q Consensus 141 PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~----------------------~~~~ 197 (241)
||.+.+..++.++|+||||+++|++++|..||.+................ ... ...+
T Consensus 178 PE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (290)
T cd07862 178 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVT 257 (290)
T ss_pred hHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHcc
Confidence 99998888999999999999999999999999765433222221111100 000 0112
Q ss_pred hhHHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 198 QFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 198 ~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
.++..+.+++.+||+.+|++|||+.++++||||
T Consensus 258 ~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 258 DIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred CCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 355678999999999999999999999999998
No 117
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.5e-39 Score=252.00 Aligned_cols=226 Identities=31% Similarity=0.465 Sum_probs=178.1
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC-CCCC
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG-GTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~ 70 (241)
++.+|+.||+|.+... .....+.+|++++++++||||++ ...+..|+||||+++++|.+++.... ..++
T Consensus 14 ~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 93 (277)
T cd05577 14 VKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFP 93 (277)
T ss_pred EcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCC
Confidence 4668999999987642 22445678999999999999988 56678999999999999999998743 3577
Q ss_pred HHHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+..+..++.| +||+.|++|+||+|+||+++.++.++|+|||.+...... .......++..|+|||.+
T Consensus 94 ~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~-------~~~~~~~~~~~y~~PE~~ 166 (277)
T cd05577 94 EARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG-------KKIKGRAGTPGYMAPEVL 166 (277)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC-------CccccccCCCCcCCHHHh
Confidence 7776666554 479999999999999999999999999999988754321 111223467889999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC-----
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW----- 219 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp----- 219 (241)
.+..++.++|+||+|+++|++++|..||.......................+...++.+.+++.+||+.+|.+||
T Consensus 167 ~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~ 246 (277)
T cd05577 167 QGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGG 246 (277)
T ss_pred cCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCChhHccCCCcc
Confidence 888889999999999999999999999976543222222222222334455566788999999999999999999
Q ss_pred ChHHHhcCCCCCCCC
Q 042809 220 SAEELLNHTFISGNA 234 (241)
Q Consensus 220 s~~~~l~~p~~~~~~ 234 (241)
++.+++.||||+...
T Consensus 247 ~~~~ll~h~~~~~~~ 261 (277)
T cd05577 247 SADEVREHPLFKDLN 261 (277)
T ss_pred cHHHHHhChhhhcCC
Confidence 888899999996543
No 118
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-42 Score=291.29 Aligned_cols=236 Identities=38% Similarity=0.665 Sum_probs=199.2
Q ss_pred CCCCCCcEEEEEecc----chHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 1 MNKGTGALFVVKSAE----SEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~----~~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++..||...|+|-+. .....+...+|..++..+.|||+|+ ...+.++|+||||++|+|.+.+.. +...++
T Consensus 1255 vN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~-gri~dE 1333 (1509)
T KOG4645|consen 1255 VNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEH-GRIEDE 1333 (1509)
T ss_pred ecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCcHHHHHHh-cchhhh
Confidence 477899999999765 2334566889999999999999998 678889999999999999999986 555666
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
...+.+..|+ ||+.|||||||||.||+++.+|.+|++|||.+..+.... ...+.......||+.|||||++.
T Consensus 1334 ~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~--~~~~~el~~~~GT~~YMAPEvit 1411 (1509)
T KOG4645|consen 1334 MVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA--QTMPGELQSMMGTPMYMAPEVIT 1411 (1509)
T ss_pred hHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCch--hcCCHHHHhhcCCchhcCchhhc
Confidence 6666666655 799999999999999999999999999999998765532 12234455677999999999997
Q ss_pred ccC---CCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChH
Q 042809 146 NEG---LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAE 222 (241)
Q Consensus 146 ~~~---~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 222 (241)
+.. ...++||||||||+.||+||+.||... +....+......+..|.+|..++..-.+|+..||..||++|+++.
T Consensus 1412 ~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~--dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~ 1489 (1509)
T KOG4645|consen 1412 GTKGKGHGGAADIWSLGCVVLEMATGKRPWAEL--DNEWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTAS 1489 (1509)
T ss_pred ccccCCCCcchhhhcccceEEEeecCCCchhhc--cchhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHH
Confidence 754 457899999999999999999999875 334455566667888899999999999999999999999999999
Q ss_pred HHhcCCCCCCCCccCCCCC
Q 042809 223 ELLNHTFISGNAKKNSTEE 241 (241)
Q Consensus 223 ~~l~~p~~~~~~~~~~~~~ 241 (241)
|+++|-|-+....+.+.+|
T Consensus 1490 qlle~~f~~~~~d~~s~~~ 1508 (1509)
T KOG4645|consen 1490 QLLEHAFGKSCTDEDSSEQ 1508 (1509)
T ss_pred HHHHhhccccccccchhhc
Confidence 9999999999888887765
No 119
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.5e-39 Score=259.26 Aligned_cols=222 Identities=23% Similarity=0.357 Sum_probs=168.2
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCccccc-----------CCceeeeeecccCCCCHHHHHHHhC
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGRN-----------GEKTVNIFMEYMAGGSLLDVAEKFG 66 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~-----------~~~~~~lv~e~~~~~~L~~~l~~~~ 66 (241)
++.+++.||+|.+... .....+.+|+.+++.++||||++. .....|++++++ +++|.+++..
T Consensus 36 ~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~-- 112 (343)
T cd07878 36 DTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIVKC-- 112 (343)
T ss_pred ECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecC-CCCHHHHHhc--
Confidence 5678999999998643 234567899999999999999871 124579999998 6799988864
Q ss_pred CCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccC
Q 042809 67 GTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMA 140 (241)
Q Consensus 67 ~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 140 (241)
..++...+..++.|+ ||++|++||||||+||+++.++.+||+|||++...... .....+++.|+|
T Consensus 113 ~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~---------~~~~~~t~~y~a 183 (343)
T cd07878 113 QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDE---------MTGYVATRWYRA 183 (343)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCCC---------cCCccccccccC
Confidence 467887777776655 79999999999999999999999999999998754321 122357899999
Q ss_pred cccccc-cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcC-------------------CCCCCC----
Q 042809 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN-------------------EKPHFP---- 196 (241)
Q Consensus 141 PE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------------------~~~~~~---- 196 (241)
||.+.+ ..++.++||||||+++|+|++|..||.+................ ..+..+
T Consensus 184 PE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (343)
T cd07878 184 PEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDL 263 (343)
T ss_pred chHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhH
Confidence 999976 56788999999999999999999999764322211111110000 000011
Q ss_pred ----hhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCc
Q 042809 197 ----TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAK 235 (241)
Q Consensus 197 ----~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~ 235 (241)
...++.+.+|+.+||..+|.+|||+.++++||||.....
T Consensus 264 ~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~ 306 (343)
T cd07878 264 KKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHD 306 (343)
T ss_pred HHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCC
Confidence 123456789999999999999999999999999987544
No 120
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.4e-39 Score=258.96 Aligned_cols=218 Identities=22% Similarity=0.317 Sum_probs=165.3
Q ss_pred CCCCcEEEEEeccc---hHHHHHHHHHHHHHhhc-CCCcccc------cCCceeeeeecccCCCCHHHHHHHhC------
Q 042809 3 KGTGALFVVKSAES---EAGVQALRNEAEIRQSL-NSPNIGR------NGEKTVNIFMEYMAGGSLLDVAEKFG------ 66 (241)
Q Consensus 3 ~~~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~------~~~~~~~lv~e~~~~~~L~~~l~~~~------ 66 (241)
+.++..||+|.+.. ......+.+|+.++..+ +||||++ ...+.+++||||+++|+|.+++....
T Consensus 34 ~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~ 113 (338)
T cd05102 34 KSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPY 113 (338)
T ss_pred cccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccc
Confidence 34567899999864 23456789999999999 7999988 33456899999999999999997532
Q ss_pred -------------------------------------------------------CCCCHHHHHHHHH------HHhhcC
Q 042809 67 -------------------------------------------------------GTLDAGVIRLYTK------EILHGN 85 (241)
Q Consensus 67 -------------------------------------------------------~~~~~~~~~~~~~------~~Lh~~ 85 (241)
.+++...+..++. .+||++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~ 193 (338)
T cd05102 114 REKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASR 193 (338)
T ss_pred cccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 1244444444444 448999
Q ss_pred CccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCchhhHHHHHHHHHHH
Q 042809 86 GILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165 (241)
Q Consensus 86 ~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l 165 (241)
|++||||||+||+++.++.++|+|||++......... .......++..|+|||.+.+..++.++||||||+++|++
T Consensus 194 ~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el 269 (338)
T cd05102 194 KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY----VRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEI 269 (338)
T ss_pred CEECCCCccceEEEcCCCcEEEeecccccccccCcch----hcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHH
Confidence 9999999999999999999999999998754321110 111223356789999999988899999999999999999
Q ss_pred Hh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 166 AT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 166 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
++ |..||.+...... .......+.....+...++.+.+++.+||+.+|.+|||+.++++
T Consensus 270 ~~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 270 FSLGASPYPGVQINEE--FCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred HhCCCCCCCCCCccHH--HHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 97 9999976433221 11222223334455667789999999999999999999999975
No 121
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=2.3e-39 Score=254.54 Aligned_cols=226 Identities=30% Similarity=0.482 Sum_probs=174.7
Q ss_pred CCCCCcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 2 NKGTGALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
+..+|..+|+|.+.. ......+.+|++++++++||||++ ..++.+++|+||+++++|.+++... ..++...
T Consensus 22 ~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~-~~~~~~~ 100 (308)
T cd06615 22 HRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPENI 100 (308)
T ss_pred EcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhc-CCCCHHH
Confidence 456889999998763 334566889999999999999988 5678999999999999999999874 5677777
Q ss_pred HHHHHHHH------hhc-CCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 74 IRLYTKEI------LHG-NGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 74 ~~~~~~~~------Lh~-~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
+..++.|+ ||+ .+++|+||+|+||+++.++.++|+|||++...... ......++..|+|||.+.+
T Consensus 101 ~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--------~~~~~~~~~~~~aPE~~~~ 172 (308)
T cd06615 101 LGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--------MANSFVGTRSYMSPERLQG 172 (308)
T ss_pred HHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccc--------ccccCCCCcCccChhHhcC
Confidence 76666654 797 69999999999999999999999999988643221 1123457889999999988
Q ss_pred cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHH---------------------------------hcCCCC
Q 042809 147 EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIA---------------------------------CSNEKP 193 (241)
Q Consensus 147 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~---------------------------------~~~~~~ 193 (241)
..++.++|+||||+++|++++|..||............... .....+
T Consensus 173 ~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (308)
T cd06615 173 THYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPP 252 (308)
T ss_pred CCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCc
Confidence 88899999999999999999999998654322211111100 001111
Q ss_pred CCCh-hhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCcc
Q 042809 194 HFPT-QFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKK 236 (241)
Q Consensus 194 ~~~~-~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~~ 236 (241)
..+. .++.++.+++.+||..+|++|||+++++.||||.....+
T Consensus 253 ~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 296 (308)
T cd06615 253 KLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAELE 296 (308)
T ss_pred cCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhcccc
Confidence 1111 246679999999999999999999999999999875443
No 122
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-41 Score=260.38 Aligned_cols=224 Identities=30% Similarity=0.492 Sum_probs=193.9
Q ss_pred CCCCcEEEEEeccc-----hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC-CCCCH
Q 042809 3 KGTGALFVVKSAES-----EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG-GTLDA 71 (241)
Q Consensus 3 ~~~~~~vaiK~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~ 71 (241)
+.||+.||+|++.+ ..+.....+|-.+|.++..+.||. +..+.+|+|+..|+||+|.-+|...+ ..+++
T Consensus 207 raTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e 286 (591)
T KOG0986|consen 207 RATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDE 286 (591)
T ss_pred ecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCch
Confidence 46889999998764 345566789999999999999988 88999999999999999999888764 46999
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+.+++.++ ||..+||+||+||+||++|..|.++|+|+|+|..+.+.. ......||.+|||||++.
T Consensus 287 ~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~-------~~~~rvGT~GYMAPEvl~ 359 (591)
T KOG0986|consen 287 QRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGK-------PIRGRVGTVGYMAPEVLQ 359 (591)
T ss_pred HHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCC-------ccccccCcccccCHHHHc
Confidence 9999999877 699999999999999999999999999999998776522 223346999999999999
Q ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC-----C
Q 042809 146 NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW-----S 220 (241)
Q Consensus 146 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s 220 (241)
...|+...|.|||||++|+|+.|+.||.........+.+..........++...++++.+|.+.+|.+||.+|. .
T Consensus 360 ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~g 439 (591)
T KOG0986|consen 360 NEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEG 439 (591)
T ss_pred CCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcC
Confidence 99999999999999999999999999987665555555555666667778888999999999999999999998 7
Q ss_pred hHHHhcCCCCCCC
Q 042809 221 AEELLNHTFISGN 233 (241)
Q Consensus 221 ~~~~l~~p~~~~~ 233 (241)
++++.+||||+.-
T Consensus 440 a~evk~HpfFk~l 452 (591)
T KOG0986|consen 440 AQEVKEHPFFKDL 452 (591)
T ss_pred cchhhhCcccccC
Confidence 8899999999863
No 123
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=5.2e-39 Score=250.75 Aligned_cols=224 Identities=36% Similarity=0.542 Sum_probs=175.5
Q ss_pred CCCCCcEEEEEeccc--hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHH
Q 042809 2 NKGTGALFVVKSAES--EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI 74 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~--~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 74 (241)
++.+++.|++|.+.. ....+.+.+|+.+++.++||||++ ..++..++||||+++++|..++......++...+
T Consensus 33 ~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~ 112 (292)
T cd06644 33 NKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQI 112 (292)
T ss_pred ECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHH
Confidence 457889999999763 344677889999999999999988 5677899999999999999988765667788877
Q ss_pred HHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc---
Q 042809 75 RLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR--- 145 (241)
Q Consensus 75 ~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~--- 145 (241)
..++.|+ ||+.|++|+||+|+||+++.++.++|+|||++...... ........+++.|+|||.+.
T Consensus 113 ~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~ 186 (292)
T cd06644 113 QVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT------LQRRDSFIGTPYWMAPEVVMCET 186 (292)
T ss_pred HHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccc------ccccceecCCccccCceeecccc
Confidence 7776655 79999999999999999999999999999987643221 11112345788899999984
Q ss_pred --ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCC--CCCChhhHHHHHHHHHHhhccCCCCCCCh
Q 042809 146 --NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEK--PHFPTQFFKKVLDFLAKCLERKPEKRWSA 221 (241)
Q Consensus 146 --~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~ 221 (241)
...++.++|+||||+++|++++|..||........ .... ..... ...+..++.++.+++++||..+|.+||++
T Consensus 187 ~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~ 263 (292)
T cd06644 187 MKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV--LLKI-AKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSA 263 (292)
T ss_pred ccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHH--HHHH-hcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCH
Confidence 34467889999999999999999999976432221 1111 11111 22345567789999999999999999999
Q ss_pred HHHhcCCCCCCCC
Q 042809 222 EELLNHTFISGNA 234 (241)
Q Consensus 222 ~~~l~~p~~~~~~ 234 (241)
+++++||||....
T Consensus 264 ~~il~~~~~~~~~ 276 (292)
T cd06644 264 AQLLEHPFVSSVT 276 (292)
T ss_pred HHHhcCccccccc
Confidence 9999999997544
No 124
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=2.6e-39 Score=255.30 Aligned_cols=224 Identities=23% Similarity=0.365 Sum_probs=162.5
Q ss_pred CCCCcEEEEEeccchHHHHHHHHHHHHHhhcCCCcccc-------cCCceeeeeecccCCCCHHHHHHHhC--------C
Q 042809 3 KGTGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-------NGEKTVNIFMEYMAGGSLLDVAEKFG--------G 67 (241)
Q Consensus 3 ~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~-------~~~~~~~lv~e~~~~~~L~~~l~~~~--------~ 67 (241)
..+++.||+|.+........+.+|+.++++++||||++ ..+..+++|+||+. ++|.+++.... .
T Consensus 25 ~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~ 103 (317)
T cd07868 25 GKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPV 103 (317)
T ss_pred CCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-CCHHHHHHhcccccccCCcc
Confidence 35778999999886555566889999999999999987 34567899999995 58988876421 2
Q ss_pred CCCHHHHHHHHHHH------hhcCCccccCCCCCcEEe----ecCCCeeecCCCcchhhcccccCCccccccccccCccc
Q 042809 68 TLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLL----GSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL 137 (241)
Q Consensus 68 ~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~----~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (241)
.++...+..++.|+ ||++|++||||||+||++ +.++.+||+|||++........ .........+++.
T Consensus 104 ~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~---~~~~~~~~~~t~~ 180 (317)
T cd07868 104 QLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLK---PLADLDPVVVTFW 180 (317)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCc---cccccCCcccccc
Confidence 46677666666654 799999999999999999 4557899999999975432111 0111233457899
Q ss_pred ccCcccccc-cCCCchhhHHHHHHHHHHHHhCCCCCccchhch----------HHHHHHHHh------------------
Q 042809 138 WMAPEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDKISNA----------AATLLKIAC------------------ 188 (241)
Q Consensus 138 ~~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----------~~~~~~~~~------------------ 188 (241)
|+|||.+.+ ..++.++|+||+||++|++++|+.||....... ...+.....
T Consensus 181 y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (317)
T cd07868 181 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHST 260 (317)
T ss_pred ccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhh
Confidence 999999977 457889999999999999999999996432210 000000000
Q ss_pred -----cCCCC----------CCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 189 -----SNEKP----------HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 189 -----~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
..... ......+..+.+|+++||+.||.+|||++++++||||
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 261 LMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred hhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 00000 0000123468899999999999999999999999998
No 125
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.6e-39 Score=260.94 Aligned_cols=220 Identities=25% Similarity=0.310 Sum_probs=164.5
Q ss_pred CCCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCcccc-----------cCCceeeeeecccCCCCHHHHHHHhC
Q 042809 2 NKGTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGR-----------NGEKTVNIFMEYMAGGSLLDVAEKFG 66 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~-----------~~~~~~~lv~e~~~~~~L~~~l~~~~ 66 (241)
|+.+++.||||.+.. ......+.+|+.+++.++||||+. .....+|+||||++ ++|..++..
T Consensus 45 ~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-- 121 (364)
T cd07875 45 DAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQM-- 121 (364)
T ss_pred ECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEEeCCC-CCHHHHHHh--
Confidence 567889999999763 334567889999999999999987 12246899999996 578777754
Q ss_pred CCCCHHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccC
Q 042809 67 GTLDAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMA 140 (241)
Q Consensus 67 ~~~~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 140 (241)
.++...+..++. ++||++|++||||||+||+++.++.++|+|||++...... .......+++.|+|
T Consensus 122 -~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-------~~~~~~~~t~~y~a 193 (364)
T cd07875 122 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-------FMMTPYVVTRYYRA 193 (364)
T ss_pred -cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCC-------CcccCCcccCCcCC
Confidence 355555555554 4479999999999999999999999999999999754321 11123457899999
Q ss_pred cccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcC------------------CCC---------
Q 042809 141 PEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN------------------EKP--------- 193 (241)
Q Consensus 141 PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~------------------~~~--------- 193 (241)
||.+.+..++.++||||||+++|+|++|+.||.+.+.............. ..+
T Consensus 194 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (364)
T cd07875 194 PEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEK 273 (364)
T ss_pred HHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHh
Confidence 99999999999999999999999999999999764332211111100000 000
Q ss_pred -----------CCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCC
Q 042809 194 -----------HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISG 232 (241)
Q Consensus 194 -----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~ 232 (241)
......+..+.+|+.+||+.||.+|||++++++||||..
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~ 323 (364)
T cd07875 274 LFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323 (364)
T ss_pred hCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence 001112357899999999999999999999999999964
No 126
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.5e-39 Score=253.56 Aligned_cols=227 Identities=24% Similarity=0.404 Sum_probs=172.8
Q ss_pred CCCCCcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 2 NKGTGALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
++.++..||+|.+... .....+.+|+.+++.++||||++ ......++|+||++ ++|.+++......++...
T Consensus 27 ~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~ 105 (301)
T cd07873 27 SKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNSINMHN 105 (301)
T ss_pred EcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc-cCHHHHHHhcCCCCCHHH
Confidence 4678899999987632 23456788999999999999988 56778999999997 599999887666677777
Q ss_pred HHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc-
Q 042809 74 IRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN- 146 (241)
Q Consensus 74 ~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~- 146 (241)
+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||++....... .......+++.|+|||.+.+
T Consensus 106 ~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~ 179 (301)
T cd07873 106 VKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT------KTYSNEVVTLWYRPPDILLGS 179 (301)
T ss_pred HHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC------CcccccceeecccCcHHHhCC
Confidence 77666544 799999999999999999999999999999986432211 11122346788999999865
Q ss_pred cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcC------------------CCCC--------CChhhH
Q 042809 147 EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN------------------EKPH--------FPTQFF 200 (241)
Q Consensus 147 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~------------------~~~~--------~~~~~~ 200 (241)
..++.++|+||||+++|+|++|+.||...+.............. ..+. ....++
T Consensus 180 ~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (301)
T cd07873 180 TDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLD 259 (301)
T ss_pred CCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCC
Confidence 34788999999999999999999999765433222111111000 0000 112356
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCc
Q 042809 201 KKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAK 235 (241)
Q Consensus 201 ~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~ 235 (241)
.++.+||.+||..+|.+|||++++++||||+.-.+
T Consensus 260 ~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~ 294 (301)
T cd07873 260 SDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGE 294 (301)
T ss_pred HHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence 78899999999999999999999999999977654
No 127
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1e-39 Score=258.76 Aligned_cols=227 Identities=25% Similarity=0.376 Sum_probs=172.3
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+++.||+|++... ...+.+.+|..++..++|+||+. ..++++|+||||+.+++|.+++......+++
T Consensus 22 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~ 101 (331)
T cd05597 22 MKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPE 101 (331)
T ss_pred ECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCH
Confidence 4678999999998742 23455889999999999999987 6778999999999999999999876667888
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++.|+ ||++|++||||||+||+++.++.++|+|||++........ .......|++.|+|||.+.
T Consensus 102 ~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~ 176 (331)
T cd05597 102 DMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT-----VQSNVAVGTPDYISPEILQ 176 (331)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC-----ccccceeccccccCHHHHh
Confidence 8777776654 7999999999999999999999999999999865432111 1112245899999999986
Q ss_pred c-----cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHH-HhcCCCCCCChhhHHHHHHHHHHhhccCCC--C
Q 042809 146 N-----EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKI-ACSNEKPHFPTQFFKKVLDFLAKCLERKPE--K 217 (241)
Q Consensus 146 ~-----~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~--~ 217 (241)
. ..++.++|+||+|+++|+|++|+.||.............. ......+......+..+.+++++|+...++ .
T Consensus 177 ~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~ 256 (331)
T cd05597 177 AMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLG 256 (331)
T ss_pred hccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccC
Confidence 3 3467889999999999999999999976433222111111 011111222234678999999998865443 3
Q ss_pred CCChHHHhcCCCCCCC
Q 042809 218 RWSAEELLNHTFISGN 233 (241)
Q Consensus 218 Rps~~~~l~~p~~~~~ 233 (241)
|+++++++.||||.+.
T Consensus 257 r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 257 RNGLQDFKDHPFFEGI 272 (331)
T ss_pred CCCHHHHhcCCCCCCC
Confidence 7899999999999764
No 128
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.4e-39 Score=253.02 Aligned_cols=224 Identities=35% Similarity=0.554 Sum_probs=176.9
Q ss_pred CCCCCcEEEEEeccch--HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHH
Q 042809 2 NKGTGALFVVKSAESE--AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI 74 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 74 (241)
|..+|+.|++|.+... ...+.+.+|+.+++.++|||+++ ......++|+||+.+++|..++.. ..+++..+
T Consensus 40 ~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~ 117 (296)
T cd06655 40 DVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTE--TCMDEAQI 117 (296)
T ss_pred EcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHHHHHHh--cCCCHHHH
Confidence 5678999999987632 33567889999999999999988 567789999999999999999875 35677776
Q ss_pred HHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccC
Q 042809 75 RLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEG 148 (241)
Q Consensus 75 ~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~ 148 (241)
..++.++ ||+.|++|+||+|+||+++.++.++|+|||++........ ......++..|+|||.+.+..
T Consensus 118 ~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~ 191 (296)
T cd06655 118 AAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS------KRSTMVGTPYWMAPEVVTRKA 191 (296)
T ss_pred HHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccc------cCCCcCCCccccCcchhcCCC
Confidence 6665544 7999999999999999999999999999998875433111 112235788999999999888
Q ss_pred CCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCC
Q 042809 149 LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHT 228 (241)
Q Consensus 149 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p 228 (241)
++.++|+||||+++|++++|..||............. .........+..++..+.++|++||..+|.+|||+.+++.||
T Consensus 192 ~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~ 270 (296)
T cd06655 192 YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA-TNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHP 270 (296)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-hcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhCh
Confidence 8999999999999999999999997654322221111 111112233456778899999999999999999999999999
Q ss_pred CCCCCC
Q 042809 229 FISGNA 234 (241)
Q Consensus 229 ~~~~~~ 234 (241)
||+...
T Consensus 271 ~~~~~~ 276 (296)
T cd06655 271 FLKLAK 276 (296)
T ss_pred Hhhhcc
Confidence 998654
No 129
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=3.2e-39 Score=252.61 Aligned_cols=233 Identities=27% Similarity=0.362 Sum_probs=177.7
Q ss_pred CCCCCcEEEEEeccchH-------HHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCC
Q 042809 2 NKGTGALFVVKSAESEA-------GVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~-------~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~ 69 (241)
++.+|+.||+|.+.... ....+.+|++++++++|+||++ ......++||||+ +++|.+++......+
T Consensus 21 ~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~~~~ 99 (298)
T cd07841 21 DKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKSIVL 99 (298)
T ss_pred ECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc-CCCHHHHHhccCCCC
Confidence 45678999999987432 2345778999999999999988 5567899999999 889999998744467
Q ss_pred CHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccc
Q 042809 70 DAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEV 143 (241)
Q Consensus 70 ~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~ 143 (241)
++..+..++.|+ ||++|++|+||+|+||+++.++.++|+|||++....... .......+++.|+|||.
T Consensus 100 ~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~------~~~~~~~~~~~y~aPE~ 173 (298)
T cd07841 100 TPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN------RKMTHQVVTRWYRAPEL 173 (298)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC------ccccccccceeeeCHHH
Confidence 887777776654 799999999999999999999999999999987554311 11122235778999999
Q ss_pred ccc-cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcC-------------------CCCC-----CChh
Q 042809 144 LRN-EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN-------------------EKPH-----FPTQ 198 (241)
Q Consensus 144 ~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------------------~~~~-----~~~~ 198 (241)
+.+ ..++.++|+||||+++|++++|..||.................. .... ....
T Consensus 174 ~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (298)
T cd07841 174 LFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPA 253 (298)
T ss_pred HhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhccc
Confidence 865 45688999999999999999998877654332211111100000 0000 1123
Q ss_pred hHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCccCCCCC
Q 042809 199 FFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTEE 241 (241)
Q Consensus 199 ~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~~~~~~~ 241 (241)
.+..+.+++.+||+.+|++|||+++++.||||++.+..+++.|
T Consensus 254 ~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~~~~~ 296 (298)
T cd07841 254 ASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPTPPSQ 296 (298)
T ss_pred ccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCCCCCC
Confidence 4578899999999999999999999999999999999888765
No 130
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=4.2e-39 Score=248.34 Aligned_cols=222 Identities=34% Similarity=0.578 Sum_probs=172.3
Q ss_pred CCCCCcEEEEEeccc--hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCC--CHH
Q 042809 2 NKGTGALFVVKSAES--EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL--DAG 72 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~--~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--~~~ 72 (241)
++.++..|++|.+.. ....+.+.+|+.++++++|+||++ ..++..++|+||+.+++|.+++......+ +..
T Consensus 29 ~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 108 (268)
T cd06624 29 DLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQ 108 (268)
T ss_pred ecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHH
Confidence 456788999998763 334567899999999999999988 56678999999999999999998754444 555
Q ss_pred HHHHHHHH------HhhcCCccccCCCCCcEEeec-CCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 73 VIRLYTKE------ILHGNGILHCDLKCNNVLLGS-HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 73 ~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
.+..++.| +||++|++|+||+|+||+++. ++.++|+|||.+........ ......++..|+|||.+.
T Consensus 109 ~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~------~~~~~~~~~~~~aPE~~~ 182 (268)
T cd06624 109 TIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP------CTETFTGTLQYMAPEVID 182 (268)
T ss_pred HHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCC------ccccCCCCccccChhhhc
Confidence 55555444 479999999999999999976 67899999999865432111 111234688999999986
Q ss_pred ccC--CCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHH
Q 042809 146 NEG--LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEE 223 (241)
Q Consensus 146 ~~~--~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ 223 (241)
+.. ++.++|+||+|+++|++++|..||........ ...........+..+...++++.+++++||+.+|.+|||+++
T Consensus 183 ~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 261 (268)
T cd06624 183 KGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA-AMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHD 261 (268)
T ss_pred cccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh-hHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHH
Confidence 543 67899999999999999999999975432221 112222223344566678889999999999999999999999
Q ss_pred HhcCCCC
Q 042809 224 LLNHTFI 230 (241)
Q Consensus 224 ~l~~p~~ 230 (241)
++.||||
T Consensus 262 ll~~~~~ 268 (268)
T cd06624 262 LLQDPFL 268 (268)
T ss_pred HHhCCCC
Confidence 9999997
No 131
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=2.6e-39 Score=252.21 Aligned_cols=219 Identities=31% Similarity=0.520 Sum_probs=179.4
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+++.+|+|.+... ...+.+.+|+++++++.||||++ ..+...++||||+++++|.+++... ..++.
T Consensus 22 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~ 100 (290)
T cd05580 22 HKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKS-GRFPE 100 (290)
T ss_pred EcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHc-CCCCH
Confidence 4568899999997642 33566889999999999999988 5678899999999999999999874 56777
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||++...... .....+++.|+|||.+.
T Consensus 101 ~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~---------~~~~~~~~~y~aPE~~~ 171 (290)
T cd05580 101 PVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR---------TYTLCGTPEYLAPEIIL 171 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC---------CCCCCCCccccChhhhc
Confidence 7777666654 79999999999999999999999999999998755331 12345788999999998
Q ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC-----C
Q 042809 146 NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW-----S 220 (241)
Q Consensus 146 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s 220 (241)
+...+.++|+||||+++|++++|..||............ .......+...+..+.+++++||..+|.+|+ +
T Consensus 172 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~ 247 (290)
T cd05580 172 SKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKI----LEGKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNG 247 (290)
T ss_pred CCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH----hcCCccCCccCCHHHHHHHHHHccCCHHHccCcccCC
Confidence 888889999999999999999999999765422221111 1334456666788999999999999999999 9
Q ss_pred hHHHhcCCCCCCCC
Q 042809 221 AEELLNHTFISGNA 234 (241)
Q Consensus 221 ~~~~l~~p~~~~~~ 234 (241)
++++++||||+...
T Consensus 248 ~~~l~~~~~~~~~~ 261 (290)
T cd05580 248 VNDIKNHPWFAGID 261 (290)
T ss_pred HHHHHcCcccccCC
Confidence 99999999997644
No 132
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.8e-39 Score=252.66 Aligned_cols=224 Identities=34% Similarity=0.542 Sum_probs=175.2
Q ss_pred CCCCCcEEEEEeccch--HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHH
Q 042809 2 NKGTGALFVVKSAESE--AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI 74 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 74 (241)
++.+++.|++|.+... ...+.+.+|+.+++.+.|+||++ ..+...|+|+||+++++|.+++.. ..++...+
T Consensus 41 ~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~ 118 (296)
T cd06654 41 DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQI 118 (296)
T ss_pred ECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHh--cCCCHHHH
Confidence 4678899999987642 33567889999999999999988 456789999999999999999875 34666666
Q ss_pred HHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccC
Q 042809 75 RLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEG 148 (241)
Q Consensus 75 ~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~ 148 (241)
..++.| +||+.|++|+||+|+||+++.++.++|+|||.+....... .......+++.|+|||.+.+..
T Consensus 119 ~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~ 192 (296)
T cd06654 119 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ------SKRSTMVGTPYWMAPEVVTRKA 192 (296)
T ss_pred HHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccc------cccCcccCCccccCHHHHcCCC
Confidence 655544 4799999999999999999999999999999887543211 1112235788999999999888
Q ss_pred CCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCC
Q 042809 149 LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHT 228 (241)
Q Consensus 149 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p 228 (241)
++.++|+||||+++|++++|+.||........... ...........+..++..+.+++.+||..+|.+|||+++++.||
T Consensus 193 ~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~ 271 (296)
T cd06654 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL-IATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQ 271 (296)
T ss_pred CCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHH-HhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhCh
Confidence 89999999999999999999999976543221111 11111112223456778899999999999999999999999999
Q ss_pred CCCCCC
Q 042809 229 FISGNA 234 (241)
Q Consensus 229 ~~~~~~ 234 (241)
||....
T Consensus 272 ~~~~~~ 277 (296)
T cd06654 272 FLKIAK 277 (296)
T ss_pred hhhccC
Confidence 997653
No 133
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=5e-39 Score=247.66 Aligned_cols=223 Identities=39% Similarity=0.687 Sum_probs=173.6
Q ss_pred CCCCCcEEEEEeccch-------HHHHHHHHHHHHHhhcCCCcccc-------cCCceeeeeecccCCCCHHHHHHHhCC
Q 042809 2 NKGTGALFVVKSAESE-------AGVQALRNEAEIRQSLNSPNIGR-------NGEKTVNIFMEYMAGGSLLDVAEKFGG 67 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-------~~~~~~~~e~~~l~~l~h~~i~~-------~~~~~~~lv~e~~~~~~L~~~l~~~~~ 67 (241)
++.+|+.|++|.+... .....+.+|+.++++++||||++ ......++++||+++++|.+++... .
T Consensus 23 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~-~ 101 (266)
T cd06651 23 DVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAY-G 101 (266)
T ss_pred EcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHc-C
Confidence 4678999999987521 23456889999999999999987 2346789999999999999999863 4
Q ss_pred CCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCc
Q 042809 68 TLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141 (241)
Q Consensus 68 ~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aP 141 (241)
.++......++.|+ ||+.+++|+||+|+||+++.++.++|+|||++......... ........++..|+||
T Consensus 102 ~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~~y~aP 178 (266)
T cd06651 102 ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMS---GTGIRSVTGTPYWMSP 178 (266)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccccc---CCccccCCccccccCH
Confidence 56766666665544 79999999999999999999999999999998654321100 0111224478889999
Q ss_pred ccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCCh
Q 042809 142 EVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSA 221 (241)
Q Consensus 142 E~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~ 221 (241)
|.+.+..++.++|+||+|+++|++++|+.||..... .............+..+...++.+.+++ +||..+|++|||+
T Consensus 179 E~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~ 255 (266)
T cd06651 179 EVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA--MAAIFKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSA 255 (266)
T ss_pred HHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch--HHHHHHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCH
Confidence 999988889999999999999999999999976432 2222233333344566667788899998 6777899999999
Q ss_pred HHHhcCCCCC
Q 042809 222 EELLNHTFIS 231 (241)
Q Consensus 222 ~~~l~~p~~~ 231 (241)
++++.||||+
T Consensus 256 ~eil~hp~~~ 265 (266)
T cd06651 256 EELLRHPFAQ 265 (266)
T ss_pred HHHhcCcccc
Confidence 9999999996
No 134
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.7e-39 Score=252.30 Aligned_cols=227 Identities=30% Similarity=0.465 Sum_probs=177.2
Q ss_pred CCCCCcEEEEEeccc--hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHH
Q 042809 2 NKGTGALFVVKSAES--EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI 74 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~--~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 74 (241)
++.++..||||.+.. ....+.+.+|+..++.++|+||++ ...+..++||||+++++|.+++.. ..++...+
T Consensus 43 ~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~ 120 (292)
T cd06658 43 EKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQI 120 (292)
T ss_pred ECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHhc--CCCCHHHH
Confidence 456789999998763 334567889999999999999988 567889999999999999998864 45677777
Q ss_pred HHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccC
Q 042809 75 RLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEG 148 (241)
Q Consensus 75 ~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~ 148 (241)
..++.|+ ||++|++||||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+..
T Consensus 121 ~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~ 194 (292)
T cd06658 121 ATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV------PKRKSLVGTPYWMAPEVISRLP 194 (292)
T ss_pred HHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhccccc------ccCceeecCccccCHHHHccCC
Confidence 6666654 799999999999999999999999999999986543211 1112345788999999998888
Q ss_pred CCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCC
Q 042809 149 LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHT 228 (241)
Q Consensus 149 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p 228 (241)
++.++|+||+|+++|++++|..||................ ..........+..+.+++.+||..+|.+|||++++++||
T Consensus 195 ~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~ 273 (292)
T cd06658 195 YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNL-PPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHP 273 (292)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC-CCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhCh
Confidence 8999999999999999999999997654332222222111 111112234567899999999999999999999999999
Q ss_pred CCCCCCccC
Q 042809 229 FISGNAKKN 237 (241)
Q Consensus 229 ~~~~~~~~~ 237 (241)
||+......
T Consensus 274 ~~~~~~~~~ 282 (292)
T cd06658 274 FLKLAGPPS 282 (292)
T ss_pred hhhccCCcc
Confidence 998765543
No 135
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=6e-39 Score=247.37 Aligned_cols=227 Identities=37% Similarity=0.636 Sum_probs=179.1
Q ss_pred CCCCCcEEEEEeccch--------HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCC
Q 042809 2 NKGTGALFVVKSAESE--------AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGT 68 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~--------~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~ 68 (241)
++.+|+.||+|.+... ...+.+.+|+..+++++|+||++ ...+..++|+||+.+++|.+++... .+
T Consensus 21 ~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-~~ 99 (268)
T cd06630 21 DVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKY-GA 99 (268)
T ss_pred EcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEeccCCCcHHHHHHHh-CC
Confidence 4678999999987632 24567899999999999999988 5677899999999999999999863 46
Q ss_pred CCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCC-CeeecCCCcchhhcccccCCccccccccccCcccccCc
Q 042809 69 LDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHG-DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141 (241)
Q Consensus 69 ~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aP 141 (241)
+++..+..++.|+ ||++|++|+||+|+||+++.++ .++|+|||.+........... .......++..|+||
T Consensus 100 ~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~--~~~~~~~~~~~~~~P 177 (268)
T cd06630 100 FKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAG--EFQGQLLGTIAFMAP 177 (268)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccccCC--ccccccccccceeCH
Confidence 6777766666654 7999999999999999998776 599999999876543211111 111234578899999
Q ss_pred ccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHH-HHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCC
Q 042809 142 EVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAAT-LLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWS 220 (241)
Q Consensus 142 E~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 220 (241)
|.+.+..++.++|+||+|++++++++|..||.......... ..........+..+...+.++.+++.+||..+|.+|||
T Consensus 178 E~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~ 257 (268)
T cd06630 178 EVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPP 257 (268)
T ss_pred hHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcC
Confidence 99988888999999999999999999999996543322222 22222234455667778889999999999999999999
Q ss_pred hHHHhcCCCCC
Q 042809 221 AEELLNHTFIS 231 (241)
Q Consensus 221 ~~~~l~~p~~~ 231 (241)
+.+++.||||+
T Consensus 258 ~~~ll~~~~~~ 268 (268)
T cd06630 258 SRELLKHPVFR 268 (268)
T ss_pred HHHHhcCcccC
Confidence 99999999985
No 136
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=4.7e-39 Score=249.19 Aligned_cols=225 Identities=35% Similarity=0.580 Sum_probs=180.7
Q ss_pred CCCCCcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 2 NKGTGALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
++.++..||+|.+.. ......+.+|+.+++.+.|+||++ ..+...++||||+++++|.+++.. .+++...
T Consensus 25 ~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~--~~l~~~~ 102 (277)
T cd06640 25 DNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRA--GPFDEFQ 102 (277)
T ss_pred EccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhc--CCCCHHH
Confidence 466889999998763 334567889999999999999988 567889999999999999999875 4566666
Q ss_pred HHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccccc
Q 042809 74 IRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNE 147 (241)
Q Consensus 74 ~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~ 147 (241)
+..++. ++||+.+++|+||+|+||+++.++.++++|||++....... .......++..|+|||.+.+.
T Consensus 103 ~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~------~~~~~~~~~~~y~apE~~~~~ 176 (277)
T cd06640 103 IATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ------IKRNTFVGTPFWMAPEVIQQS 176 (277)
T ss_pred HHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc------cccccccCcccccCHhHhccC
Confidence 555554 44799999999999999999999999999999986543311 111223467889999999888
Q ss_pred CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcC
Q 042809 148 GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227 (241)
Q Consensus 148 ~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 227 (241)
.++.++|+||||+++|++++|..||......... ........+..+...+..+.+++.+||..+|.+||++.+++.|
T Consensus 177 ~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 177 AYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL---FLIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHh---hhhhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 8999999999999999999999999764332221 1222233455666788899999999999999999999999999
Q ss_pred CCCCCCCccC
Q 042809 228 TFISGNAKKN 237 (241)
Q Consensus 228 p~~~~~~~~~ 237 (241)
|||.....+.
T Consensus 254 ~~~~~~~~~~ 263 (277)
T cd06640 254 KFIVKNAKKT 263 (277)
T ss_pred hHhhhcchhh
Confidence 9998877654
No 137
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=4.5e-40 Score=260.88 Aligned_cols=221 Identities=29% Similarity=0.445 Sum_probs=170.6
Q ss_pred CCCCCcEEEEEeccchH-----HHHHHHHHHHHHhhc---CCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCC
Q 042809 2 NKGTGALFVVKSAESEA-----GVQALRNEAEIRQSL---NSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGT 68 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l---~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~ 68 (241)
++.+|+.||+|++.... ....+..|..++... .||||+. ......|+||||+.+|+|.+++.. ...
T Consensus 14 ~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~ 92 (330)
T cd05586 14 KKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQK-EGR 92 (330)
T ss_pred ECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCCChHHHHHHh-cCC
Confidence 56789999999986432 223345666666655 6999987 567889999999999999999886 456
Q ss_pred CCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcc
Q 042809 69 LDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPE 142 (241)
Q Consensus 69 ~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE 142 (241)
+++..+..++.|+ ||++|++||||||+||+++.++.++|+|||++....... .......|++.|+|||
T Consensus 93 ~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~------~~~~~~~gt~~y~aPE 166 (330)
T cd05586 93 FSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN------KTTNTFCGTTEYLAPE 166 (330)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC------CCccCccCCccccCHH
Confidence 7887777766654 799999999999999999999999999999986432110 1122346899999999
Q ss_pred ccccc-CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCC-hhhHHHHHHHHHHhhccCCCCCC-
Q 042809 143 VLRNE-GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP-TQFFKKVLDFLAKCLERKPEKRW- 219 (241)
Q Consensus 143 ~~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~Rp- 219 (241)
.+.+. .++.++||||||+++|+|++|..||............ ... ...++ ..++.++.+++++||..+|.+||
T Consensus 167 ~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i---~~~-~~~~~~~~~~~~~~~li~~~L~~~P~~R~~ 242 (330)
T cd05586 167 VLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNI---AFG-KVRFPKNVLSDEGRQFVKGLLNRNPQHRLG 242 (330)
T ss_pred HHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHH---HcC-CCCCCCccCCHHHHHHHHHHcCCCHHHCCC
Confidence 98764 4788999999999999999999999765433322221 111 12222 24678899999999999999998
Q ss_pred ---ChHHHhcCCCCCCC
Q 042809 220 ---SAEELLNHTFISGN 233 (241)
Q Consensus 220 ---s~~~~l~~p~~~~~ 233 (241)
+++++++||||+..
T Consensus 243 ~~~~~~~ll~h~~~~~~ 259 (330)
T cd05586 243 AHRDAVELKEHPFFADI 259 (330)
T ss_pred CCCCHHHHhcCccccCC
Confidence 79999999999764
No 138
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-41 Score=264.85 Aligned_cols=209 Identities=30% Similarity=0.465 Sum_probs=171.8
Q ss_pred CCcEEEEEeccchHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHHH
Q 042809 5 TGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTK 79 (241)
Q Consensus 5 ~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 79 (241)
.+..||||+++. .-..+++-|++|+||||+. ....++|||||||..|.|...|+. +..+.......+..
T Consensus 146 ~netVAVKKV~e-----lkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka-~~~itp~llv~Wsk 219 (904)
T KOG4721|consen 146 HNETVAVKKVRE-----LKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKA-GRPITPSLLVDWSK 219 (904)
T ss_pred cCceehhHHHhh-----hhhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhc-cCccCHHHHHHHHH
Confidence 466788887662 2346788899999999988 667899999999999999999998 45666666655554
Q ss_pred ------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCchh
Q 042809 80 ------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFAT 153 (241)
Q Consensus 80 ------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~ 153 (241)
+|||.++|+|||||.-|||++.+..+||+|||-++...+. .....++||..|||||.+...+.+.++
T Consensus 220 ~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~-------STkMSFaGTVaWMAPEvIrnePcsEKV 292 (904)
T KOG4721|consen 220 GIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK-------STKMSFAGTVAWMAPEVIRNEPCSEKV 292 (904)
T ss_pred HhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhh-------hhhhhhhhhHhhhCHHHhhcCCccccc
Confidence 5699999999999999999999999999999999876552 223457799999999999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCC
Q 042809 154 DIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHT 228 (241)
Q Consensus 154 Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p 228 (241)
||||||+|||||+||..||.+-+. ...++...........|..+++.+.=|+++||+..|..|||+.+++.|-
T Consensus 293 DIwSfGVVLWEmLT~EiPYkdVds--sAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 293 DIWSFGVVLWEMLTGEIPYKDVDS--SAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL 365 (904)
T ss_pred ceehhHHHHHHHHhcCCCccccch--heeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence 999999999999999999987432 2222222222344566778889999999999999999999999999984
No 139
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=3.5e-39 Score=250.18 Aligned_cols=223 Identities=30% Similarity=0.448 Sum_probs=170.9
Q ss_pred CCCCCcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 2 NKGTGALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
|..+++.||+|.+..+ .....+.+|+.++.++.||||++ ...+..++|+||+++++|..+. .+++..
T Consensus 22 ~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~-----~~~~~~ 96 (279)
T cd06619 22 HLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSLDVYR-----KIPEHV 96 (279)
T ss_pred EcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCChHHhh-----cCCHHH
Confidence 5678999999987632 34567889999999999999998 5667899999999999996553 244554
Q ss_pred HHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccccc
Q 042809 74 IRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNE 147 (241)
Q Consensus 74 ~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~ 147 (241)
+..++. ++||+.|++|+||+|+||+++.++.++|+|||++...... ......++..|+|||.+.+.
T Consensus 97 ~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~ 168 (279)
T cd06619 97 LGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS--------IAKTYVGTNAYMAPERISGE 168 (279)
T ss_pred HHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc--------cccCCCCChhhcCceeecCC
Confidence 444444 4579999999999999999999999999999998754321 11234578899999999988
Q ss_pred CCCchhhHHHHHHHHHHHHhCCCCCccchhch----HHHHHHHHhcCCCCCC-ChhhHHHHHHHHHHhhccCCCCCCChH
Q 042809 148 GLDFATDIWSLGCMVIEMATGRPPWGDKISNA----AATLLKIACSNEKPHF-PTQFFKKVLDFLAKCLERKPEKRWSAE 222 (241)
Q Consensus 148 ~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rps~~ 222 (241)
.++.++|+||||+++|++++|..||....... .............+.. ....+.++.+++.+||+.+|.+||+++
T Consensus 169 ~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~ 248 (279)
T cd06619 169 QYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPE 248 (279)
T ss_pred CCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHH
Confidence 89999999999999999999999996432111 1111111111112222 234667899999999999999999999
Q ss_pred HHhcCCCCCCCCccC
Q 042809 223 ELLNHTFISGNAKKN 237 (241)
Q Consensus 223 ~~l~~p~~~~~~~~~ 237 (241)
+++.||||......+
T Consensus 249 eil~~~~~~~~~~~~ 263 (279)
T cd06619 249 NLMDHPFIVQYNDGN 263 (279)
T ss_pred HHhcCcccccccCcc
Confidence 999999998775554
No 140
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=3.7e-39 Score=258.07 Aligned_cols=221 Identities=24% Similarity=0.300 Sum_probs=164.6
Q ss_pred CCCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCcccc-----------cCCceeeeeecccCCCCHHHHHHHhC
Q 042809 2 NKGTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGR-----------NGEKTVNIFMEYMAGGSLLDVAEKFG 66 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~-----------~~~~~~~lv~e~~~~~~L~~~l~~~~ 66 (241)
|..+++.||+|.+.. ......+.+|+.+++.++||||++ ......|+||||+++ +|...+..
T Consensus 38 ~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~-- 114 (355)
T cd07874 38 DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQM-- 114 (355)
T ss_pred ecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhhcc-cHHHHHhh--
Confidence 567899999998763 234567889999999999999987 122467999999964 77777654
Q ss_pred CCCCHHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccC
Q 042809 67 GTLDAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMA 140 (241)
Q Consensus 67 ~~~~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 140 (241)
.++...+..++. ++||++|++||||||+||+++.++.+||+|||++...... .......+++.|+|
T Consensus 115 -~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~~~~~~t~~y~a 186 (355)
T cd07874 115 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-------FMMTPYVVTRYYRA 186 (355)
T ss_pred -cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCc-------cccCCccccCCccC
Confidence 356655555554 4479999999999999999999999999999999754321 11123457899999
Q ss_pred cccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcC------------------CC----------
Q 042809 141 PEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN------------------EK---------- 192 (241)
Q Consensus 141 PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~------------------~~---------- 192 (241)
||.+.+..++.++|+||||+++|+|++|+.||.+................ ..
T Consensus 187 PE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (355)
T cd07874 187 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 266 (355)
T ss_pred HHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchh
Confidence 99999988999999999999999999999999764321111100000000 00
Q ss_pred ----------CCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCC
Q 042809 193 ----------PHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233 (241)
Q Consensus 193 ----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~ 233 (241)
...+...+..+.+++.+||..+|.+|||+.++++||||...
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~ 317 (355)
T cd07874 267 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW 317 (355)
T ss_pred hccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence 00111234578999999999999999999999999999743
No 141
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1e-38 Score=245.48 Aligned_cols=220 Identities=31% Similarity=0.495 Sum_probs=178.2
Q ss_pred CCCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCcccc-------cCCceeeeeecccCCCCHHHHHHHh---CC
Q 042809 2 NKGTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGR-------NGEKTVNIFMEYMAGGSLLDVAEKF---GG 67 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~-------~~~~~~~lv~e~~~~~~L~~~l~~~---~~ 67 (241)
++.+|+.+|+|.+.. ....+.+.+|+.++++++|+||++ ......++++||+++++|.+++... ..
T Consensus 21 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~ 100 (265)
T cd08217 21 RKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERK 100 (265)
T ss_pred ecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhccc
Confidence 567889999998752 344567889999999999999987 2456789999999999999999764 45
Q ss_pred CCCHHHHHHHHHHH------hh-----cCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcc
Q 042809 68 TLDAGVIRLYTKEI------LH-----GNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQ 136 (241)
Q Consensus 68 ~~~~~~~~~~~~~~------Lh-----~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (241)
.++...+..++.++ || +.+++|+||+|+||+++.++.++|+|||++........ ......+++
T Consensus 101 ~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~------~~~~~~~~~ 174 (265)
T cd08217 101 YIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSS------FAKTYVGTP 174 (265)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCcc------cccccccCC
Confidence 67777766666544 79 89999999999999999999999999999986543211 012234788
Q ss_pred cccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCC
Q 042809 137 LWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPE 216 (241)
Q Consensus 137 ~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 216 (241)
.|+|||.+.+..++.++|+||||++++++++|..||...... ...........+..+...+..+.+++.+||+.+|.
T Consensus 175 ~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~ 251 (265)
T cd08217 175 YYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL---QLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPD 251 (265)
T ss_pred CccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH---HHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcc
Confidence 999999998888899999999999999999999999875422 22233333444556677888999999999999999
Q ss_pred CCCChHHHhcCCCC
Q 042809 217 KRWSAEELLNHTFI 230 (241)
Q Consensus 217 ~Rps~~~~l~~p~~ 230 (241)
+|||++++++|||+
T Consensus 252 ~Rp~~~~il~~~~~ 265 (265)
T cd08217 252 KRPSTEELLQLPLI 265 (265)
T ss_pred cCCCHHHHhhCCCC
Confidence 99999999999996
No 142
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=3.1e-39 Score=247.73 Aligned_cols=220 Identities=29% Similarity=0.486 Sum_probs=180.6
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+++.||+|.+... ...+.+.+|++.+++++||||++ ......++|+||+.|++|.+++... ..++.
T Consensus 21 ~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~ 99 (258)
T cd05578 21 KRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQK-VKFSE 99 (258)
T ss_pred EccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhc-CCcCH
Confidence 4678999999988743 34677899999999999999988 6778899999999999999999874 57777
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||.+....... ......++..|+|||.+.
T Consensus 100 ~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~ 172 (258)
T cd05578 100 EQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-------LTTSTSGTPGYMAPEVLC 172 (258)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-------cccccCCChhhcCHHHHc
Confidence 7777766655 799999999999999999999999999999987653311 112344778899999998
Q ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCCh--HH
Q 042809 146 NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSA--EE 223 (241)
Q Consensus 146 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~--~~ 223 (241)
+..++.++|+||||+++|++++|..||............. .........+...+..+.+++++||..+|.+||++ .+
T Consensus 173 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~ 251 (258)
T cd05578 173 RQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRA-KQETADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKD 251 (258)
T ss_pred ccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHH-HhccccccCcccCcHHHHHHHHHHccCChhHcCCccHHH
Confidence 8888999999999999999999999998765432222222 22224455667778899999999999999999999 99
Q ss_pred HhcCCCC
Q 042809 224 LLNHTFI 230 (241)
Q Consensus 224 ~l~~p~~ 230 (241)
++.||||
T Consensus 252 l~~~~~~ 258 (258)
T cd05578 252 LKNHPYF 258 (258)
T ss_pred HhcCCCC
Confidence 9999998
No 143
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.7e-39 Score=252.87 Aligned_cols=225 Identities=34% Similarity=0.540 Sum_probs=175.3
Q ss_pred CCCCCcEEEEEeccc--hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHH
Q 042809 2 NKGTGALFVVKSAES--EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI 74 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~--~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 74 (241)
++.+|+.||+|.+.. ....+.+.+|+.+++.++|+||++ ..++..++||||+++++|.+++.. ..++...+
T Consensus 40 ~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~ 117 (297)
T cd06656 40 DIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQI 117 (297)
T ss_pred ECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHh--CCCCHHHH
Confidence 467899999998763 233466889999999999999988 567789999999999999999975 34566666
Q ss_pred HHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccC
Q 042809 75 RLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEG 148 (241)
Q Consensus 75 ~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~ 148 (241)
..++.+ +||+.|++|+||+|+||+++.++.++|+|||.+....... .......+++.|+|||.+.+..
T Consensus 118 ~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~ 191 (297)
T cd06656 118 AAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ------SKRSTMVGTPYWMAPEVVTRKA 191 (297)
T ss_pred HHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc------cCcCcccCCccccCHHHHcCCC
Confidence 555544 4799999999999999999999999999999986543211 1112335788899999999888
Q ss_pred CCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCC
Q 042809 149 LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHT 228 (241)
Q Consensus 149 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p 228 (241)
++.++|+||||+++|++++|..||........... ...........+...+..+.+++.+||..+|.+|||+++++.||
T Consensus 192 ~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 270 (297)
T cd06656 192 YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-IATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHP 270 (297)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee-eccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 89999999999999999999999976433221111 10111112223455677899999999999999999999999999
Q ss_pred CCCCCCc
Q 042809 229 FISGNAK 235 (241)
Q Consensus 229 ~~~~~~~ 235 (241)
||+....
T Consensus 271 ~~~~~~~ 277 (297)
T cd06656 271 FLKLAKP 277 (297)
T ss_pred hhccccc
Confidence 9976544
No 144
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=8.6e-40 Score=250.91 Aligned_cols=222 Identities=32% Similarity=0.512 Sum_probs=173.1
Q ss_pred CCCCCcEEEEEeccchHH----HHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHH
Q 042809 2 NKGTGALFVVKSAESEAG----VQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAG 72 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~~----~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 72 (241)
++.+++.||+|.+..... .....+|+.++++++||||++ ......++||||+++++|.+++.. ...++..
T Consensus 20 ~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~~-~~~~~~~ 98 (260)
T PF00069_consen 20 NKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQK-NKPLSEE 98 (260)
T ss_dssp ETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHHH-HSSBBHH
T ss_pred ECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccccccccccccccc-ccccccc
Confidence 567889999999885432 223456999999999999988 567889999999999999999984 4677888
Q ss_pred HHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc-
Q 042809 73 VIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR- 145 (241)
Q Consensus 73 ~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~- 145 (241)
.+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||.+..... .........++..|+|||.+.
T Consensus 99 ~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~------~~~~~~~~~~~~~y~aPE~~~~ 172 (260)
T PF00069_consen 99 EILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSE------NNENFNPFVGTPEYMAPEVLQQ 172 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTS------TTSEBSSSSSSGGGSCHHHHTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc------cccccccccccccccccccccc
Confidence 888777766 7999999999999999999999999999999864311 112233455788999999998
Q ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCC---CCCCChhhHHHHHHHHHHhhccCCCCCCChH
Q 042809 146 NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNE---KPHFPTQFFKKVLDFLAKCLERKPEKRWSAE 222 (241)
Q Consensus 146 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 222 (241)
+...+.++|+||+|+++|+|++|..||................... ........+..+.+++.+||+.+|.+|||++
T Consensus 173 ~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~ 252 (260)
T PF00069_consen 173 GKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAE 252 (260)
T ss_dssp TSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHH
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHH
Confidence 7888999999999999999999999998752222222222111110 0011111237899999999999999999999
Q ss_pred HHhcCCCC
Q 042809 223 ELLNHTFI 230 (241)
Q Consensus 223 ~~l~~p~~ 230 (241)
++++||||
T Consensus 253 ~l~~~~~~ 260 (260)
T PF00069_consen 253 ELLKHPWF 260 (260)
T ss_dssp HHHTSGGG
T ss_pred HHhcCCCC
Confidence 99999997
No 145
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=3.5e-39 Score=251.25 Aligned_cols=221 Identities=27% Similarity=0.355 Sum_probs=165.3
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhc---CCCcccc----------cCCceeeeeecccCCCCHHHHHHH
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSL---NSPNIGR----------NGEKTVNIFMEYMAGGSLLDVAEK 64 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l---~h~~i~~----------~~~~~~~lv~e~~~~~~L~~~l~~ 64 (241)
++.+|+.||+|.+... .....+.+|+.+++.+ .||||++ ......++|+||+. ++|.+++..
T Consensus 21 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~ 99 (288)
T cd07863 21 DPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVD-QDLRTYLDK 99 (288)
T ss_pred ECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEcccc-cCHHHHHHh
Confidence 5778999999987632 1223456777777665 6999987 12456899999997 589998876
Q ss_pred hC-CCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCccc
Q 042809 65 FG-GTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL 137 (241)
Q Consensus 65 ~~-~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (241)
.. ..++...+..++.|+ ||++|++|+||||+||+++.++.++|+|||++...... .......++..
T Consensus 100 ~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~~~~ 172 (288)
T cd07863 100 VPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQ-------MALTPVVVTLW 172 (288)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccccCc-------ccCCCcccccc
Confidence 43 347777777776654 79999999999999999999999999999998754321 11122347889
Q ss_pred ccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcC-CC----------------------CC
Q 042809 138 WMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN-EK----------------------PH 194 (241)
Q Consensus 138 ~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~----------------------~~ 194 (241)
|+|||.+.+..++.++||||+|+++|++++|..||.................. .. ..
T Consensus 173 y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (288)
T cd07863 173 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQS 252 (288)
T ss_pred ccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHH
Confidence 99999999888999999999999999999999999664332222111111000 00 00
Q ss_pred CChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 195 FPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 195 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
..+.++..+.+++.+||+.||.+|||+.+++.||||
T Consensus 253 ~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 253 VVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred hCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 112355678999999999999999999999999998
No 146
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.6e-39 Score=261.56 Aligned_cols=223 Identities=28% Similarity=0.453 Sum_probs=174.0
Q ss_pred CCCCCcEEEEEeccchH-HHHHHHHHHHHHhhcC-C-----Ccccc-----cCCceeeeeecccCCCCHHHHHHHhC-CC
Q 042809 2 NKGTGALFVVKSAESEA-GVQALRNEAEIRQSLN-S-----PNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG-GT 68 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~-h-----~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~-~~ 68 (241)
|.+|++.||||++++.. -..+...|+.+|..|+ | -|+|+ ...+++|||+|.+. .+|.++++... ..
T Consensus 207 d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL~-~NLYellK~n~f~G 285 (586)
T KOG0667|consen 207 DHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELLS-TNLYELLKNNKFRG 285 (586)
T ss_pred ecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhhh-hhHHHHHHhcCCCC
Confidence 78999999999999654 4577889999999997 3 35676 67899999999995 69999999753 45
Q ss_pred CCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecC--CCeeecCCCcchhhcccccCCccccccccccCcccccC
Q 042809 69 LDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSH--GDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMA 140 (241)
Q Consensus 69 ~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~--~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 140 (241)
++...++.++.|+ ||+.||||+||||+|||+..- ..+||+|||.+....+ ..+ ..+.++.|+|
T Consensus 286 lsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q--------~vy-tYiQSRfYRA 356 (586)
T KOG0667|consen 286 LSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQ--------RVY-TYIQSRFYRA 356 (586)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCC--------cce-eeeecccccc
Confidence 8899999988887 699999999999999999664 3699999999986544 111 4567899999
Q ss_pred cccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcC------------------------------
Q 042809 141 PEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN------------------------------ 190 (241)
Q Consensus 141 PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~------------------------------ 190 (241)
||++.|.+|+.+.|||||||++.||++|.+.|.+..+.+....+......
T Consensus 357 PEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~ 436 (586)
T KOG0667|consen 357 PEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETS 436 (586)
T ss_pred chhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeec
Confidence 99999999999999999999999999998888664322221111111000
Q ss_pred ------------------CCCCCC-----------hhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCC
Q 042809 191 ------------------EKPHFP-----------TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNA 234 (241)
Q Consensus 191 ------------------~~~~~~-----------~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~ 234 (241)
.....| ......+.+++++||..||.+|+|..++++||||++..
T Consensus 437 ~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~~ 509 (586)
T KOG0667|consen 437 APRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGTS 509 (586)
T ss_pred ccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccccccc
Confidence 000001 11224689999999999999999999999999998443
No 147
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.7e-39 Score=243.99 Aligned_cols=230 Identities=28% Similarity=0.408 Sum_probs=177.6
Q ss_pred CCCCCCcEEEEEeccchH----HHHHHHHHHHHHhhcCCCc-ccc------cC-----CceeeeeecccCCCCHHHHHHH
Q 042809 1 MNKGTGALFVVKSAESEA----GVQALRNEAEIRQSLNSPN-IGR------NG-----EKTVNIFMEYMAGGSLLDVAEK 64 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~-i~~------~~-----~~~~~lv~e~~~~~~L~~~l~~ 64 (241)
+++.+|+.||+|+++-+. ......+|+.+++.++|+| |+. .. ...+++|+||++ -+|..++..
T Consensus 31 r~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d-~DL~~ymd~ 109 (323)
T KOG0594|consen 31 RSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLD-RDLKKYMDS 109 (323)
T ss_pred EEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeec-ccHHHHHHh
Confidence 467899999999987332 3466799999999999999 877 22 238999999996 599999998
Q ss_pred hC---CCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCc
Q 042809 65 FG---GTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGT 135 (241)
Q Consensus 65 ~~---~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~ 135 (241)
.. ...+...++.+..|+ ||++||+||||||.||+++.+|.+||+|||++....-. ........+|
T Consensus 110 ~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip------~~~yt~evvT 183 (323)
T KOG0594|consen 110 LPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIP------MRTYTPEVVT 183 (323)
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCC------cccccccEEE
Confidence 65 357777777777776 69999999999999999999999999999999855421 1223445578
Q ss_pred ccccCccccccc-CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCC--------------CCC----
Q 042809 136 QLWMAPEVLRNE-GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP--------------HFP---- 196 (241)
Q Consensus 136 ~~~~aPE~~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------~~~---- 196 (241)
..|+|||++.|. .|+...||||+||++.||++++..|.+..+......+......... .++
T Consensus 184 lWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~ 263 (323)
T KOG0594|consen 184 LWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPG 263 (323)
T ss_pred eeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCC
Confidence 889999999886 6899999999999999999999999775443322222222111000 111
Q ss_pred -hh-------hHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCccC
Q 042809 197 -TQ-------FFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKN 237 (241)
Q Consensus 197 -~~-------~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~~~ 237 (241)
.. ..++..+++.+||+.+|.+|.|++.++.||||.......
T Consensus 264 ~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~~ 312 (323)
T KOG0594|consen 264 PKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEKS 312 (323)
T ss_pred ccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccch
Confidence 11 113789999999999999999999999999998775543
No 148
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.3e-39 Score=262.10 Aligned_cols=224 Identities=22% Similarity=0.305 Sum_probs=170.4
Q ss_pred CCCCcEEEEEeccchHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHH
Q 042809 3 KGTGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY 77 (241)
Q Consensus 3 ~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 77 (241)
..+++.||+|.+... ....+|++++++++||||++ ......|+|||++. ++|.+++.. ...+++..+..+
T Consensus 116 ~~~~~~v~vK~~~~~---~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~-~~~l~~~~~~~i 190 (392)
T PHA03207 116 DEQRKKVIVKAVTGG---KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-CDLFTYVDR-SGPLPLEQAITI 190 (392)
T ss_pred CccceeEEEEecccc---ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-CCHHHHHHh-cCCCCHHHHHHH
Confidence 456788999987754 23568999999999999998 45678999999995 689998854 567888887777
Q ss_pred HHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCc
Q 042809 78 TKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDF 151 (241)
Q Consensus 78 ~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ 151 (241)
+.|+ ||++|++||||||+||+++.++.++|+|||++........ ........|++.|+|||.+.+..++.
T Consensus 191 ~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~ 266 (392)
T PHA03207 191 QRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD----TPQCYGWSGTLETNSPELLALDPYCA 266 (392)
T ss_pred HHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccc----cccccccccccCccCHhHhcCCCCCc
Confidence 6655 7999999999999999999999999999999875433211 11122356899999999999988999
Q ss_pred hhhHHHHHHHHHHHHhCCCCCccchhch----HHHHHHHH----------------------hcCCCCC--CC-----hh
Q 042809 152 ATDIWSLGCMVIEMATGRPPWGDKISNA----AATLLKIA----------------------CSNEKPH--FP-----TQ 198 (241)
Q Consensus 152 ~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~~~----------------------~~~~~~~--~~-----~~ 198 (241)
++|||||||++|+|++|+.||.+..... ...+.... .....+. .+ ..
T Consensus 267 ~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (392)
T PHA03207 267 KTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYG 346 (392)
T ss_pred hhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccC
Confidence 9999999999999999999996543221 11111100 0000000 01 12
Q ss_pred hHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCc
Q 042809 199 FFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAK 235 (241)
Q Consensus 199 ~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~ 235 (241)
.+.++.++|++||..+|.+|||+.+++.||||+....
T Consensus 347 ~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~ 383 (392)
T PHA03207 347 MHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPI 383 (392)
T ss_pred cchhHHHHHHHHhccChhhCCCHHHHhhCchhhccch
Confidence 3467889999999999999999999999999976544
No 149
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=7.3e-39 Score=247.44 Aligned_cols=221 Identities=31% Similarity=0.521 Sum_probs=169.4
Q ss_pred CCCCCcEEEEEeccch-HHHHHHHHHHHHHhhc-CCCcccc-----c------CCceeeeeecccCCCCHHHHHHHh-CC
Q 042809 2 NKGTGALFVVKSAESE-AGVQALRNEAEIRQSL-NSPNIGR-----N------GEKTVNIFMEYMAGGSLLDVAEKF-GG 67 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~-----~------~~~~~~lv~e~~~~~~L~~~l~~~-~~ 67 (241)
++.+++.||+|.+... .....+.+|+.++.++ +|+||++ . .....|+|+||+.+++|.+++... ..
T Consensus 27 ~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~ 106 (272)
T cd06637 27 HVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGN 106 (272)
T ss_pred EcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCC
Confidence 4568899999997643 3346688999999998 6999987 1 135689999999999999999874 34
Q ss_pred CCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCc
Q 042809 68 TLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141 (241)
Q Consensus 68 ~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aP 141 (241)
.+++..+..++.|+ ||+.+++|+||+|+||+++.++.++|+|||++....... .......|+..|+||
T Consensus 107 ~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~------~~~~~~~g~~~y~aP 180 (272)
T cd06637 107 TLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV------GRRNTFIGTPYWMAP 180 (272)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceeccccc------ccCCcccccccccCH
Confidence 57777666665544 899999999999999999999999999999987543211 112234578899999
Q ss_pred cccc-----ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCC
Q 042809 142 EVLR-----NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPE 216 (241)
Q Consensus 142 E~~~-----~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 216 (241)
|.+. +..++.++|+||+|+++|++++|..||........ .............+...+..+.+|+.+||..+|.
T Consensus 181 E~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 258 (272)
T cd06637 181 EVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA--LFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHS 258 (272)
T ss_pred hHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHH--HHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCChh
Confidence 9986 34577899999999999999999999965432221 1111111222222345667899999999999999
Q ss_pred CCCChHHHhcCCCC
Q 042809 217 KRWSAEELLNHTFI 230 (241)
Q Consensus 217 ~Rps~~~~l~~p~~ 230 (241)
+|||+.+++.||||
T Consensus 259 ~Rpt~~~il~~~~~ 272 (272)
T cd06637 259 QRPTTEQLMKHPFI 272 (272)
T ss_pred hCCCHHHHhhCCCC
Confidence 99999999999997
No 150
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=2.1e-39 Score=251.16 Aligned_cols=223 Identities=35% Similarity=0.598 Sum_probs=177.0
Q ss_pred CCCCCcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 2 NKGTGALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
++.+|..||+|.+.. ....+.+.+|+.++++++||||++ ......++|+||+++++|.+++.. ..++...
T Consensus 25 ~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~ 102 (277)
T cd06642 25 DNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKP--GPLEETY 102 (277)
T ss_pred EcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcHHHHhhc--CCCCHHH
Confidence 467789999998762 344567899999999999999988 567789999999999999999875 4566766
Q ss_pred HHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccccc
Q 042809 74 IRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNE 147 (241)
Q Consensus 74 ~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~ 147 (241)
+..++.+ +||++|++|+||+|+||+++.++.++++|||++....... .......++..|+|||.+.+.
T Consensus 103 ~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~ 176 (277)
T cd06642 103 IATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ------IKRNTFVGTPFWMAPEVIKQS 176 (277)
T ss_pred HHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcc------hhhhcccCcccccCHHHhCcC
Confidence 6665554 4799999999999999999999999999999986543311 111223478889999999988
Q ss_pred CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcC
Q 042809 148 GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227 (241)
Q Consensus 148 ~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 227 (241)
.++.++|+||||+++|++++|..||.......... .......+..+...+..+.+++.+||+.+|.+|||+.+++.|
T Consensus 177 ~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 177 AYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF---LIPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred CCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHh---hhhcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 89999999999999999999999986543322211 112223334445667889999999999999999999999999
Q ss_pred CCCCCCCc
Q 042809 228 TFISGNAK 235 (241)
Q Consensus 228 p~~~~~~~ 235 (241)
|||.....
T Consensus 254 ~~~~~~~~ 261 (277)
T cd06642 254 KFITRYTK 261 (277)
T ss_pred HHHHHHhh
Confidence 99975543
No 151
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=6e-39 Score=253.09 Aligned_cols=230 Identities=29% Similarity=0.448 Sum_probs=176.6
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHh-CCCCC
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF-GGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~ 70 (241)
+..+|+.||+|.+..+ ...+.+.+|++.+..++|+||++ ......|+||||+.+++|.+++... +..++
T Consensus 22 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~ 101 (316)
T cd05574 22 LKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLS 101 (316)
T ss_pred EcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccC
Confidence 3567899999987743 24567889999999999999988 5677899999999999999998864 35677
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCcc-------------------
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNL------------------- 125 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~------------------- 125 (241)
+.....++.|+ ||+.|++|+||+|+||+++.++.++|+|||++............
T Consensus 102 ~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (316)
T cd05574 102 EEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETF 181 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhh
Confidence 77776665544 79999999999999999999999999999998754321110000
Q ss_pred ----ccccccccCcccccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHH
Q 042809 126 ----KQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFK 201 (241)
Q Consensus 126 ----~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (241)
........|+..|+|||.+.+..++.++||||||+++|++++|..||.......... ...............+.
T Consensus 182 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 259 (316)
T cd05574 182 SEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFS--NILKKEVTFPGSPPVSS 259 (316)
T ss_pred cccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHH--HHhcCCccCCCccccCH
Confidence 001113357888999999998889999999999999999999999997654332221 11111111111222678
Q ss_pred HHHHHHHHhhccCCCCCCC----hHHHhcCCCCCCC
Q 042809 202 KVLDFLAKCLERKPEKRWS----AEELLNHTFISGN 233 (241)
Q Consensus 202 ~~~~li~~~l~~~p~~Rps----~~~~l~~p~~~~~ 233 (241)
.+.+++.+||..+|.+||| +++++.||||+..
T Consensus 260 ~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~ 295 (316)
T cd05574 260 SARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGV 295 (316)
T ss_pred HHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcC
Confidence 9999999999999999999 9999999999764
No 152
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1e-38 Score=244.74 Aligned_cols=219 Identities=42% Similarity=0.755 Sum_probs=175.8
Q ss_pred CCCCCcEEEEEeccch-------HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCC
Q 042809 2 NKGTGALFVVKSAESE-------AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-------~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~ 69 (241)
++.++..|++|.+... ...+.+.+|+.+++.++|+||++ ..+...++|+||+++++|.+++... ..+
T Consensus 21 ~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~ 99 (258)
T cd06632 21 NLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKY-GSF 99 (258)
T ss_pred EcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEecCCCcHHHHHHhc-CCC
Confidence 3568899999987632 25677999999999999999988 5667899999999999999999874 456
Q ss_pred CHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccc
Q 042809 70 DAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEV 143 (241)
Q Consensus 70 ~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~ 143 (241)
+...+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||.+....... ......++..|+|||.
T Consensus 100 ~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~-------~~~~~~~~~~y~~pe~ 172 (258)
T cd06632 100 PEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS-------FAKSFKGSPYWMAPEV 172 (258)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc-------cccccCCCcceeCHHH
Confidence 676666655544 799999999999999999999999999999987543311 1123457888999999
Q ss_pred ccccC-CCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChH
Q 042809 144 LRNEG-LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAE 222 (241)
Q Consensus 144 ~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 222 (241)
+.... ++.++|+||||+++|++++|..||..... .............+..+..++..+.+++++||..+|.+|||+.
T Consensus 173 ~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ 250 (258)
T cd06632 173 IAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG--VAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAA 250 (258)
T ss_pred hcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH--HHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHH
Confidence 87766 88999999999999999999999976542 2222222222344455667788999999999999999999999
Q ss_pred HHhcCCCC
Q 042809 223 ELLNHTFI 230 (241)
Q Consensus 223 ~~l~~p~~ 230 (241)
+++.|||+
T Consensus 251 ~~l~~~~~ 258 (258)
T cd06632 251 ELLEHPFV 258 (258)
T ss_pred HHhcCCCC
Confidence 99999996
No 153
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=7.3e-39 Score=245.33 Aligned_cols=220 Identities=25% Similarity=0.432 Sum_probs=176.2
Q ss_pred CCCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC-CCCCH
Q 042809 2 NKGTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG-GTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~ 71 (241)
++.+|+.||+|.+.. ....+.+.+|+.++++++||||++ ...+..++|+||+.+++|.+++.... ..++.
T Consensus 21 ~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~ 100 (256)
T cd08218 21 SKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPE 100 (256)
T ss_pred EcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCH
Confidence 456789999998763 234567899999999999999988 66779999999999999999997643 34666
Q ss_pred HHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++.| +||++|++|+||+|+||+++.++.++++|||++....... .......+++.|+|||.+.
T Consensus 101 ~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~------~~~~~~~~~~~~~~pe~~~ 174 (256)
T cd08218 101 DQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV------ELARTCIGTPYYLSPEICE 174 (256)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch------hhhhhccCCccccCHHHhC
Confidence 666555554 4799999999999999999999999999999987543311 1112234788899999998
Q ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHh
Q 042809 146 NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225 (241)
Q Consensus 146 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l 225 (241)
+..++.++|+||||++++++++|..||....... .......+..+..+...+.++.++|.+||+.+|.+||++.+++
T Consensus 175 ~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl 251 (256)
T cd08218 175 NRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKN---LVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSIL 251 (256)
T ss_pred CCCCCCccchhHHHHHHHHHHcCCCCccCCCHHH---HHHHHhcCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHh
Confidence 8888899999999999999999999997543322 2222233444555667788999999999999999999999999
Q ss_pred cCCCC
Q 042809 226 NHTFI 230 (241)
Q Consensus 226 ~~p~~ 230 (241)
+||||
T Consensus 252 ~~~~~ 256 (256)
T cd08218 252 EKNFI 256 (256)
T ss_pred hCcCC
Confidence 99997
No 154
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2.2e-39 Score=257.05 Aligned_cols=225 Identities=24% Similarity=0.380 Sum_probs=171.8
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+++.+|+|.+.+. .....+.+|..++..++|+||+. .....+|+||||+.+|+|.+++......+++
T Consensus 22 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~ 101 (332)
T cd05623 22 LKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPE 101 (332)
T ss_pred ECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCH
Confidence 4667899999998642 22345788999999999999987 6778899999999999999999876667787
Q ss_pred HHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++.| +||+.|++||||||+||+++.++.++|+|||++....... ........|++.|+|||++.
T Consensus 102 ~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~-----~~~~~~~~gt~~y~aPE~~~ 176 (332)
T cd05623 102 DMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG-----TVQSSVAVGTPDYISPEILQ 176 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCC-----cceecccccCccccCHHHHh
Confidence 777666654 4799999999999999999999999999999986432211 01112345899999999986
Q ss_pred -----ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCC---CCCCChhhHHHHHHHHHHhhccCCCC
Q 042809 146 -----NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNE---KPHFPTQFFKKVLDFLAKCLERKPEK 217 (241)
Q Consensus 146 -----~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~ 217 (241)
...++.++|+||||+++|+|++|..||........... ...... .+.....++.++.+++++|+..++.+
T Consensus 177 ~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~--i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r 254 (332)
T cd05623 177 AMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK--IMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHR 254 (332)
T ss_pred ccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHH--HhCCCccccCCCccccCCHHHHHHHHHHccChhhh
Confidence 34578899999999999999999999976433222211 111111 12222356789999999998664444
Q ss_pred --CCChHHHhcCCCCCCC
Q 042809 218 --RWSAEELLNHTFISGN 233 (241)
Q Consensus 218 --Rps~~~~l~~p~~~~~ 233 (241)
|++++++++||||.+.
T Consensus 255 ~~r~~~~~~~~h~~f~~~ 272 (332)
T cd05623 255 LGQNGIEDFKQHPFFTGI 272 (332)
T ss_pred cCCCCHHHHhCCCCcCCC
Confidence 6899999999999863
No 155
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.7e-38 Score=244.04 Aligned_cols=222 Identities=35% Similarity=0.510 Sum_probs=174.9
Q ss_pred CCCCCcEEEEEeccch--HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHH
Q 042809 2 NKGTGALFVVKSAESE--AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI 74 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 74 (241)
++.+++.+++|.+... ...+.+.+|+.++++++||||++ .....+|++|||+.+++|.+++......++...+
T Consensus 24 ~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~ 103 (262)
T cd06613 24 DIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQI 103 (262)
T ss_pred ecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHH
Confidence 4567889999987743 34678999999999999999988 5677899999999999999999876567888777
Q ss_pred HHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccccc-
Q 042809 75 RLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNE- 147 (241)
Q Consensus 75 ~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~- 147 (241)
..++.|+ ||+.|++|+||+|+||+++.++.++|+|||.+....... .......++..|+|||.+.+.
T Consensus 104 ~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~------~~~~~~~~~~~y~~Pe~~~~~~ 177 (262)
T cd06613 104 AYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI------AKRKSFIGTPYWMAPEVAAVER 177 (262)
T ss_pred HHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhh------hccccccCCccccCchhhcccc
Confidence 7666654 799999999999999999999999999999987554311 011234578889999999776
Q ss_pred --CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHH-hcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHH
Q 042809 148 --GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIA-CSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224 (241)
Q Consensus 148 --~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 224 (241)
.++.++|+||||+++|+|++|..||............... ........+...+.++.+++++||..+|.+|||+.++
T Consensus 178 ~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i 257 (262)
T cd06613 178 KGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKL 257 (262)
T ss_pred cCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHH
Confidence 7888999999999999999999999764322222111111 0111112234567789999999999999999999999
Q ss_pred hcCCC
Q 042809 225 LNHTF 229 (241)
Q Consensus 225 l~~p~ 229 (241)
+.|+|
T Consensus 258 l~~~~ 262 (262)
T cd06613 258 LQHPF 262 (262)
T ss_pred hcCCC
Confidence 99998
No 156
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=5.6e-39 Score=265.32 Aligned_cols=223 Identities=21% Similarity=0.315 Sum_probs=164.2
Q ss_pred CCCCCcEEEEEeccch-HHHHHHHHHHHHHhhcCCCc------ccc------cCCceeeeeecccCCCCHHHHHHHhCCC
Q 042809 2 NKGTGALFVVKSAESE-AGVQALRNEAEIRQSLNSPN------IGR------NGEKTVNIFMEYMAGGSLLDVAEKFGGT 68 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-~~~~~~~~e~~~l~~l~h~~------i~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~ 68 (241)
+..+++.||||+++.. .....+..|+.++..++|.+ ++. ....++|+|||++ +++|.+++... ..
T Consensus 150 ~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~-~~ 227 (467)
T PTZ00284 150 DRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMKH-GP 227 (467)
T ss_pred EcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHHc-CC
Confidence 5678899999998742 33445677888888887655 433 3456899999999 67999988863 56
Q ss_pred CCHHHHHHHHHHH------hhc-CCccccCCCCCcEEeecCC----------------CeeecCCCcchhhcccccCCcc
Q 042809 69 LDAGVIRLYTKEI------LHG-NGILHCDLKCNNVLLGSHG----------------DVKLPDLGCARRVNDLKNNGNL 125 (241)
Q Consensus 69 ~~~~~~~~~~~~~------Lh~-~~~vH~dl~p~Nil~~~~~----------------~~kl~dfg~~~~~~~~~~~~~~ 125 (241)
++...+..++.|+ ||+ .|++||||||+||+++.++ .+||+|||.+.....
T Consensus 228 l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~------- 300 (467)
T PTZ00284 228 FSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERH------- 300 (467)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCcc-------
Confidence 7777777666654 797 5999999999999998765 499999998753211
Q ss_pred ccccccccCcccccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCC--------------
Q 042809 126 KQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNE-------------- 191 (241)
Q Consensus 126 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------------- 191 (241)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.................
T Consensus 301 --~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~ 378 (467)
T PTZ00284 301 --SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEAR 378 (467)
T ss_pred --ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHH
Confidence 1223568999999999999999999999999999999999999997654332222211111000
Q ss_pred ---------CCCCC---------------hhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCc
Q 042809 192 ---------KPHFP---------------TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAK 235 (241)
Q Consensus 192 ---------~~~~~---------------~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~ 235 (241)
.+... ....+.+.+||.+||..||.+|||++++++||||.....
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~~ 446 (467)
T PTZ00284 379 LLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYP 446 (467)
T ss_pred HHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccccCC
Confidence 00000 011345789999999999999999999999999987443
No 157
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=5.6e-39 Score=249.62 Aligned_cols=222 Identities=24% Similarity=0.372 Sum_probs=167.9
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHH
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAG 72 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 72 (241)
++.+|+.||+|.+... .....+.+|+.++++++||||++ .+....++|+||+. ++|.+++......+++.
T Consensus 21 ~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~ 99 (284)
T cd07839 21 NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD-QDLKKYFDSCNGDIDPE 99 (284)
T ss_pred ECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCC-CCHHHHHHhcCCCCCHH
Confidence 5678999999987632 22356788999999999999988 66778999999996 58988887766678888
Q ss_pred HHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 73 VIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 73 ~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
.+..++.|+ ||++|++|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+
T Consensus 100 ~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~ 173 (284)
T cd07839 100 IVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV------RCYSAEVVTLWYRPPDVLFG 173 (284)
T ss_pred HHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC------CCcCCCccccCCcChHHHhC
Confidence 887777655 799999999999999999999999999999987543211 11122346788999999876
Q ss_pred cC-CCchhhHHHHHHHHHHHHhCCCCCccchh-chHHHHHHHHhc----------------CCCCC---------CChhh
Q 042809 147 EG-LDFATDIWSLGCMVIEMATGRPPWGDKIS-NAAATLLKIACS----------------NEKPH---------FPTQF 199 (241)
Q Consensus 147 ~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~-~~~~~~~~~~~~----------------~~~~~---------~~~~~ 199 (241)
.. ++.++|+||||+++|+|++|..|+..... ............ ...+. ..+.+
T Consensus 174 ~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (284)
T cd07839 174 AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKL 253 (284)
T ss_pred CcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccC
Confidence 44 68899999999999999998888643221 111111100000 00000 11235
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 200 ~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
+..+.+++++||+.+|.+|||+++++.||||
T Consensus 254 ~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 254 NSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred CHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 6788999999999999999999999999998
No 158
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.2e-38 Score=247.79 Aligned_cols=223 Identities=33% Similarity=0.533 Sum_probs=175.4
Q ss_pred CCCCCcEEEEEeccc--hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHH
Q 042809 2 NKGTGALFVVKSAES--EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI 74 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~--~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 74 (241)
++.+++.+++|.+.. ....+.+.+|+.+++.+.||||++ ...+..++|+||+.+++|.+++.. ..++...+
T Consensus 40 ~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~ 117 (285)
T cd06648 40 DKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQI 117 (285)
T ss_pred ECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh--CCCCHHHH
Confidence 456789999998763 233556889999999999999988 466889999999999999999987 45676666
Q ss_pred HHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccC
Q 042809 75 RLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEG 148 (241)
Q Consensus 75 ~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~ 148 (241)
..++.|+ ||++|++||||+|+||+++.++.++|+|||.+....... .......|++.|+|||.+.+..
T Consensus 118 ~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~ 191 (285)
T cd06648 118 ATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV------PRRKSLVGTPYWMAPEVISRLP 191 (285)
T ss_pred HHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCC------cccccccCCccccCHHHhcCCC
Confidence 6665544 799999999999999999999999999999876443211 1112345788999999998888
Q ss_pred CCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCC--CChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 149 LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPH--FPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 149 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
++.++|+||+|+++|++++|..||............. ....+. .+...+..+.+++.+||+.+|++|||+.++++
T Consensus 192 ~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 192 YGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIR---DNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred CCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHH---hcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 8999999999999999999999997643322222211 111122 22336788999999999999999999999999
Q ss_pred CCCCCCCCc
Q 042809 227 HTFISGNAK 235 (241)
Q Consensus 227 ~p~~~~~~~ 235 (241)
||||+....
T Consensus 269 ~~~~~~~~~ 277 (285)
T cd06648 269 HPFLAKAGP 277 (285)
T ss_pred CcccccCCC
Confidence 999987654
No 159
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=2.3e-38 Score=243.81 Aligned_cols=223 Identities=38% Similarity=0.638 Sum_probs=173.6
Q ss_pred CCCCCcEEEEEeccc-------hHHHHHHHHHHHHHhhcCCCcccc-----c--CCceeeeeecccCCCCHHHHHHHhCC
Q 042809 2 NKGTGALFVVKSAES-------EAGVQALRNEAEIRQSLNSPNIGR-----N--GEKTVNIFMEYMAGGSLLDVAEKFGG 67 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~-------~~~~~~~~~e~~~l~~l~h~~i~~-----~--~~~~~~lv~e~~~~~~L~~~l~~~~~ 67 (241)
++.+|+.||+|.+.. ....+.+.+|+.++.++.||||++ . ....+++|+||+++++|.+++... .
T Consensus 23 ~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-~ 101 (265)
T cd06652 23 DADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSY-G 101 (265)
T ss_pred EcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHc-C
Confidence 567899999998642 123567889999999999999988 1 235688999999999999999864 4
Q ss_pred CCCHHHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCc
Q 042809 68 TLDAGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141 (241)
Q Consensus 68 ~~~~~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aP 141 (241)
.++......++.+ +||+.+++|+||+|+||+++.++.++|+|||.+......... ........++..|+||
T Consensus 102 ~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~---~~~~~~~~~~~~y~aP 178 (265)
T cd06652 102 ALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLS---GTGMKSVTGTPYWMSP 178 (265)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccccccccc---ccccccCCCCccccCh
Confidence 5666666665554 479999999999999999999999999999988754321100 0111234578899999
Q ss_pred ccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCCh
Q 042809 142 EVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSA 221 (241)
Q Consensus 142 E~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~ 221 (241)
|.+.+..++.++|+||||+++|++++|..||...... ............+..+...+..+.+++++|+. +|++|||+
T Consensus 179 E~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~ 255 (265)
T cd06652 179 EVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM--AAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSA 255 (265)
T ss_pred hhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH--HHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCH
Confidence 9998888899999999999999999999999764222 22223333333455667778889999999995 89999999
Q ss_pred HHHhcCCCCC
Q 042809 222 EELLNHTFIS 231 (241)
Q Consensus 222 ~~~l~~p~~~ 231 (241)
+++++|||++
T Consensus 256 ~~il~~~~~~ 265 (265)
T cd06652 256 DELLRHTFVH 265 (265)
T ss_pred HHHhcCcccC
Confidence 9999999984
No 160
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.8e-39 Score=256.88 Aligned_cols=219 Identities=26% Similarity=0.314 Sum_probs=163.5
Q ss_pred CCCCCcEEEEEeccchHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHH
Q 042809 2 NKGTGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRL 76 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 76 (241)
++.++..||+|...... ...|+.++++++||||++ ......++|+|++. ++|.+++......+++..+..
T Consensus 87 ~~~~~~~valK~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~ 161 (357)
T PHA03209 87 KPGQPDPVVLKIGQKGT----TLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-SDLYTYLTKRSRPLPIDQALI 161 (357)
T ss_pred ECCCCceEEEEeCCccc----cHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-CcHHHHHHhccCCCCHHHHHH
Confidence 45678899999865432 356899999999999998 55678999999995 699999887667788888777
Q ss_pred HHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCC
Q 042809 77 YTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLD 150 (241)
Q Consensus 77 ~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~ 150 (241)
++.|+ ||++|++||||||+||+++.++.++|+|||.+...... .......|++.|+|||.+.+..++
T Consensus 162 i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~ 234 (357)
T PHA03209 162 IEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA-------PAFLGLAGTVETNAPEVLARDKYN 234 (357)
T ss_pred HHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC-------cccccccccccccCCeecCCCCCC
Confidence 76654 79999999999999999999999999999998642221 111234588999999999998899
Q ss_pred chhhHHHHHHHHHHHHhCCCC-Cccchhch-------HHHHHHH--HhcCCCCCCC------------------------
Q 042809 151 FATDIWSLGCMVIEMATGRPP-WGDKISNA-------AATLLKI--ACSNEKPHFP------------------------ 196 (241)
Q Consensus 151 ~~~Di~slG~~l~~l~~g~~p-~~~~~~~~-------~~~~~~~--~~~~~~~~~~------------------------ 196 (241)
.++|+||||+++|+++++..+ |....... ...+... .....+..++
T Consensus 235 ~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (357)
T PHA03209 235 SKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTR 314 (357)
T ss_pred chhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccc
Confidence 999999999999999985444 33211110 0000000 0000000111
Q ss_pred ------hhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCC
Q 042809 197 ------TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISG 232 (241)
Q Consensus 197 ------~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~ 232 (241)
...+.++.+||.+||+.||.+|||++++++||||+.
T Consensus 315 ~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 315 YPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred cHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 123456778999999999999999999999999975
No 161
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.8e-39 Score=261.93 Aligned_cols=222 Identities=23% Similarity=0.264 Sum_probs=166.4
Q ss_pred CCCCCcEEEEEeccchHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHH
Q 042809 2 NKGTGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRL 76 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 76 (241)
+..+++.||+|... ...+.+|++++++++|+||++ ..++..++|+|++. ++|.+++......+++..+..
T Consensus 190 ~~~~~~~vavK~~~----~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~l~~~~~~~ 264 (461)
T PHA03211 190 HPDYPQRVVVKAGW----YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDLYTYLGARLRPLGLAQVTA 264 (461)
T ss_pred ECCCCCEEEEeccc----ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCHHHHHHhcCCCCCHHHHHH
Confidence 45678899999644 234678999999999999998 45678999999995 699999887656788888877
Q ss_pred HHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCC
Q 042809 77 YTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLD 150 (241)
Q Consensus 77 ~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~ 150 (241)
++.|+ ||++|++||||||+||+++.++.++|+|||++........ ........|++.|+|||.+.+..++
T Consensus 265 i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~----~~~~~~~~GT~~Y~APE~~~~~~~~ 340 (461)
T PHA03211 265 VARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS----TPFHYGIAGTVDTNAPEVLAGDPYT 340 (461)
T ss_pred HHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccc----cccccccCCCcCCcCHHHHcCCCCC
Confidence 77755 7999999999999999999999999999999875432111 1111234589999999999999999
Q ss_pred chhhHHHHHHHHHHHHhCCCCCccch--------hchHHHHHHHHhcC--C---------------------CCCCC---
Q 042809 151 FATDIWSLGCMVIEMATGRPPWGDKI--------SNAAATLLKIACSN--E---------------------KPHFP--- 196 (241)
Q Consensus 151 ~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~~~~~~~~~--~---------------------~~~~~--- 196 (241)
.++|||||||++|++++|..++.... ......++...... . .+...
T Consensus 341 ~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 420 (461)
T PHA03211 341 PSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPA 420 (461)
T ss_pred chHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcc
Confidence 99999999999999999775542211 11111111111100 0 00000
Q ss_pred ----hhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCC
Q 042809 197 ----TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISG 232 (241)
Q Consensus 197 ----~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~ 232 (241)
...+.++.+||.+||+.||.+|||++|+|+||||+.
T Consensus 421 ~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 421 WTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred hhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 023357899999999999999999999999999964
No 162
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.3e-38 Score=244.94 Aligned_cols=225 Identities=33% Similarity=0.589 Sum_probs=182.6
Q ss_pred CCCCCcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 2 NKGTGALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
++.+|+.|++|.+... .....+.+|+..+.+++|+|+++ ......++|+||+++++|.+++... ..++...
T Consensus 22 ~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~ 100 (264)
T cd06623 22 HKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKV-GKIPEPV 100 (264)
T ss_pred EcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHc-CCCCHHH
Confidence 4568999999997754 34678999999999999999988 5678999999999999999999874 5677777
Q ss_pred HHHHHHHH------hhc-CCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 74 IRLYTKEI------LHG-NGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 74 ~~~~~~~~------Lh~-~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
...++.|+ ||+ .|++|+||+|+||+++.++.++|+|||.+......... .....++..|+|||.+.+
T Consensus 101 ~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~------~~~~~~~~~y~~pE~~~~ 174 (264)
T cd06623 101 LAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ------CNTFVGTVTYMSPERIQG 174 (264)
T ss_pred HHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCc------ccceeecccccCHhhhCC
Confidence 66665544 799 99999999999999999999999999998755432111 112346788999999988
Q ss_pred cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChh-hHHHHHHHHHHhhccCCCCCCChHHHh
Q 042809 147 EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQ-FFKKVLDFLAKCLERKPEKRWSAEELL 225 (241)
Q Consensus 147 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~~p~~Rps~~~~l 225 (241)
..++.++|+||||+++|++++|..||....................+..+.. .+..+.+++++||..+|.+|||+.+++
T Consensus 175 ~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll 254 (264)
T cd06623 175 ESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELL 254 (264)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence 8889999999999999999999999976542222333333334444555555 788999999999999999999999999
Q ss_pred cCCCCCCC
Q 042809 226 NHTFISGN 233 (241)
Q Consensus 226 ~~p~~~~~ 233 (241)
+|||++..
T Consensus 255 ~~~~~~~~ 262 (264)
T cd06623 255 QHPFIKKA 262 (264)
T ss_pred hCHHHHhc
Confidence 99999754
No 163
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1e-38 Score=245.98 Aligned_cols=219 Identities=32% Similarity=0.494 Sum_probs=169.5
Q ss_pred CCCCCcEEEEEeccch--HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHH
Q 042809 2 NKGTGALFVVKSAESE--AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI 74 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 74 (241)
+..+++.||+|.+... .....+.+|+.+++.++||||++ ...+..++|+||+++++|.+++.. .+.+++..+
T Consensus 30 ~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~ 108 (267)
T cd06645 30 NVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHV-TGPLSESQI 108 (267)
T ss_pred EcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHh-cCCCCHHHH
Confidence 4678999999987643 33456889999999999999988 567889999999999999999876 356777777
Q ss_pred HHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc---
Q 042809 75 RLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR--- 145 (241)
Q Consensus 75 ~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~--- 145 (241)
..++.|+ ||+.|++|+||+|+||+++.++.++|+|||++....... .......|+..|+|||.+.
T Consensus 109 ~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~ 182 (267)
T cd06645 109 AYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATI------AKRKSFIGTPYWMAPEVAAVER 182 (267)
T ss_pred HHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcc------cccccccCcccccChhhhcccc
Confidence 7766654 799999999999999999999999999999986543211 1112345788999999974
Q ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCC-CCC--ChhhHHHHHHHHHHhhccCCCCCCChH
Q 042809 146 NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEK-PHF--PTQFFKKVLDFLAKCLERKPEKRWSAE 222 (241)
Q Consensus 146 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~ 222 (241)
...++.++|+||+|+++|++++|..||.......... ........ +.. ...++..+.+++.+||..+|.+|||++
T Consensus 183 ~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~ 260 (267)
T cd06645 183 KGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF--LMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAE 260 (267)
T ss_pred CCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHH--hhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHH
Confidence 4457889999999999999999999986533222111 11111111 111 123567899999999999999999999
Q ss_pred HHhcCCC
Q 042809 223 ELLNHTF 229 (241)
Q Consensus 223 ~~l~~p~ 229 (241)
++++|||
T Consensus 261 ~ll~~~~ 267 (267)
T cd06645 261 KLLQHPF 267 (267)
T ss_pred HHhcCCC
Confidence 9999998
No 164
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.1e-38 Score=247.31 Aligned_cols=223 Identities=27% Similarity=0.447 Sum_probs=170.3
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhh---cCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCC
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQS---LNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGT 68 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~---l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~ 68 (241)
++.+|+.+|+|.+... .....+.+|..++.. ..||||+. ..++..++||||+++++|.+++... ..
T Consensus 15 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~-~~ 93 (279)
T cd05633 15 KADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQH-GV 93 (279)
T ss_pred ECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHHHhc-CC
Confidence 4578999999987642 112234445444333 46999987 4567899999999999999998863 56
Q ss_pred CCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcc
Q 042809 69 LDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPE 142 (241)
Q Consensus 69 ~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE 142 (241)
+++..+..++.|+ ||+.+++|+||+|+||+++.++.++|+|||++....... .....|+..|+|||
T Consensus 94 l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~--------~~~~~~~~~y~aPE 165 (279)
T cd05633 94 FSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--------PHASVGTHGYMAPE 165 (279)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC--------ccCcCCCcCccCHH
Confidence 7877777666544 799999999999999999999999999999986443211 11235789999999
Q ss_pred ccc-ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC--
Q 042809 143 VLR-NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW-- 219 (241)
Q Consensus 143 ~~~-~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-- 219 (241)
.+. +..++.++|+||+|+++|++++|..||........... ...........+...+.++.+++++||..+|.+||
T Consensus 166 ~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~ 244 (279)
T cd05633 166 VLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI-DRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGC 244 (279)
T ss_pred HhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHH-HHHhhcCCcCCccccCHHHHHHHHHHhcCCHHHhcCC
Confidence 986 45678999999999999999999999975433322222 22222334455667888999999999999999999
Q ss_pred ---ChHHHhcCCCCCCCC
Q 042809 220 ---SAEELLNHTFISGNA 234 (241)
Q Consensus 220 ---s~~~~l~~p~~~~~~ 234 (241)
|++++++||||++..
T Consensus 245 ~~~~~~~~~~h~~~~~~~ 262 (279)
T cd05633 245 LGRGAQEVKEHVFFKGID 262 (279)
T ss_pred CCCCHHHHHhCccccCCC
Confidence 699999999998854
No 165
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.5e-38 Score=243.51 Aligned_cols=219 Identities=25% Similarity=0.388 Sum_probs=174.3
Q ss_pred CCCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC-CCCCH
Q 042809 2 NKGTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG-GTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~ 71 (241)
++.+++.+|+|.+.. ......+.+|+.++++++|||+++ ..++..++|+||+++++|.+++.... ..+++
T Consensus 21 ~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~ 100 (256)
T cd08220 21 RKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDE 100 (256)
T ss_pred EcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCH
Confidence 456889999998763 234567899999999999999987 56778999999999999999998753 34677
Q ss_pred HHHHHHHHH------HhhcCCccccCCCCCcEEeecCC-CeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 72 GVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHG-DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 72 ~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
..+..++.+ +||++|++|+||+|+||+++.++ .++|+|||.+....... ......++..|+|||.+
T Consensus 101 ~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~ 173 (256)
T cd08220 101 DTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS-------KAYTVVGTPCYISPELC 173 (256)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-------cccccccCCcccCchhc
Confidence 766665554 47999999999999999998654 57999999997654311 11223478899999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHH
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 224 (241)
.+..++.++|+||||+++|++++|..||......... ...........+...+.++.+++.+||..+|.+|||+.++
T Consensus 174 ~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l 250 (256)
T cd08220 174 EGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALV---LKIMSGTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQI 250 (256)
T ss_pred cCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHH---HHHHhcCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHH
Confidence 9888899999999999999999999999765433222 2222233344555678899999999999999999999999
Q ss_pred hcCCCC
Q 042809 225 LNHTFI 230 (241)
Q Consensus 225 l~~p~~ 230 (241)
++||||
T Consensus 251 l~~p~~ 256 (256)
T cd08220 251 MAQPIC 256 (256)
T ss_pred hhCCCC
Confidence 999997
No 166
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=3.7e-38 Score=241.46 Aligned_cols=220 Identities=26% Similarity=0.429 Sum_probs=176.0
Q ss_pred CCCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHh-CCCCCH
Q 042809 2 NKGTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF-GGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~ 71 (241)
+..+|+.+++|.+.. ......+.+|+.++++++|+||++ ...+..++++||+++++|.+++... ...++.
T Consensus 21 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~ 100 (256)
T cd08221 21 RTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEE 100 (256)
T ss_pred EcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCH
Confidence 457889999998652 345567889999999999999988 6678899999999999999999874 345677
Q ss_pred HHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++.| +||+.|++|+||+|+||+++.++.++|+|||.+........ ......+++.|.|||.+.
T Consensus 101 ~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~------~~~~~~~~~~y~ape~~~ 174 (256)
T cd08221 101 EMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS------MAETVVGTPYYMSPELCQ 174 (256)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc------cccccCCCccccCHhhcC
Confidence 766665554 47999999999999999999999999999999875433211 112345788999999998
Q ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHh
Q 042809 146 NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225 (241)
Q Consensus 146 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l 225 (241)
+..++.++|+||||+++|++++|..||.......... ....+.....+...+.++.+++.+||..+|.+|||+++++
T Consensus 175 ~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll 251 (256)
T cd08221 175 GVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVV---KIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVL 251 (256)
T ss_pred CCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHH---HHHcCCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHh
Confidence 8888899999999999999999999997643322221 1122333334456778999999999999999999999999
Q ss_pred cCCCC
Q 042809 226 NHTFI 230 (241)
Q Consensus 226 ~~p~~ 230 (241)
+|||+
T Consensus 252 ~~~~l 256 (256)
T cd08221 252 DQPLL 256 (256)
T ss_pred hCcCC
Confidence 99996
No 167
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=3.5e-39 Score=255.74 Aligned_cols=225 Identities=26% Similarity=0.419 Sum_probs=172.7
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+++.||+|.+... .....+.+|..++..+.|+||+. ...+..|+||||+.||+|.+++......+++
T Consensus 22 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~ 101 (331)
T cd05624 22 MKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPE 101 (331)
T ss_pred ECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCH
Confidence 4678899999998642 22345788999999999999987 6778999999999999999999876667788
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++.|+ ||++|++||||||+||+++.++.++|+|||++........ .......|++.|+|||.+.
T Consensus 102 ~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-----~~~~~~~gt~~y~aPE~~~ 176 (331)
T cd05624 102 DMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT-----VQSSVAVGTPDYISPEILQ 176 (331)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCc-----eeeccccCCcccCCHHHHh
Confidence 7777666654 7999999999999999999999999999999865432110 1112345899999999987
Q ss_pred c-----cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCC---hhhHHHHHHHHHHhhccCCCC
Q 042809 146 N-----EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP---TQFFKKVLDFLAKCLERKPEK 217 (241)
Q Consensus 146 ~-----~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~ 217 (241)
+ ..++.++|+||+|+++|+|++|+.||.......... ..........++ ..++..+.+++.+|+...+++
T Consensus 177 ~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~--~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~ 254 (331)
T cd05624 177 AMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG--KIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERR 254 (331)
T ss_pred ccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHH--HHHcCCCcccCCCccccCCHHHHHHHHHHccCchhh
Confidence 5 457889999999999999999999997643322211 111111112222 345789999999999865544
Q ss_pred --CCChHHHhcCCCCCCC
Q 042809 218 --RWSAEELLNHTFISGN 233 (241)
Q Consensus 218 --Rps~~~~l~~p~~~~~ 233 (241)
|+++++++.||||+..
T Consensus 255 ~~~~~~~~~~~h~~f~~~ 272 (331)
T cd05624 255 LGQNGIEDFKKHAFFEGI 272 (331)
T ss_pred cCCCCHHHHhcCCCcCCC
Confidence 4699999999999763
No 168
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.5e-38 Score=245.48 Aligned_cols=227 Identities=30% Similarity=0.529 Sum_probs=173.3
Q ss_pred CCCCCcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-------cCCceeeeeecccCCCCHHHHHHH---hCCC
Q 042809 2 NKGTGALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-------NGEKTVNIFMEYMAGGSLLDVAEK---FGGT 68 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-------~~~~~~~lv~e~~~~~~L~~~l~~---~~~~ 68 (241)
++.+++.+|+|.+... .....+.+|++++++++||||++ ...+.+++||||+++++|.+++.. ....
T Consensus 22 ~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 101 (287)
T cd06621 22 LKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGR 101 (287)
T ss_pred ECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCC
Confidence 4568899999987732 34567899999999999999988 234578999999999999988764 2345
Q ss_pred CCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcc
Q 042809 69 LDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPE 142 (241)
Q Consensus 69 ~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE 142 (241)
++...+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||++....... .....++..|+|||
T Consensus 102 l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~--------~~~~~~~~~y~~pE 173 (287)
T cd06621 102 IGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL--------AGTFTGTSFYMAPE 173 (287)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccccc--------cccccCCccccCHH
Confidence 6666665555544 799999999999999999999999999999986443211 11234678899999
Q ss_pred cccccCCCchhhHHHHHHHHHHHHhCCCCCccchh--chHHHHHHHHhcCCCCCC------ChhhHHHHHHHHHHhhccC
Q 042809 143 VLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKIS--NAAATLLKIACSNEKPHF------PTQFFKKVLDFLAKCLERK 214 (241)
Q Consensus 143 ~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~------~~~~~~~~~~li~~~l~~~ 214 (241)
.+.+..++.++|+||||+++|++++|..||..... ...............+.. ....++.+.+++.+||..+
T Consensus 174 ~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 253 (287)
T cd06621 174 RIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKD 253 (287)
T ss_pred HhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCC
Confidence 99988899999999999999999999999976421 111122221111111111 1234678999999999999
Q ss_pred CCCCCChHHHhcCCCCCCCCcc
Q 042809 215 PEKRWSAEELLNHTFISGNAKK 236 (241)
Q Consensus 215 p~~Rps~~~~l~~p~~~~~~~~ 236 (241)
|.+|||+.+++.||||+....+
T Consensus 254 p~~Rpt~~eil~~~~~~~~~~~ 275 (287)
T cd06621 254 PTRRPTPWDMLEHPWIKAQMKK 275 (287)
T ss_pred cccCCCHHHHHhCccccccccc
Confidence 9999999999999999766554
No 169
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.5e-38 Score=248.36 Aligned_cols=231 Identities=25% Similarity=0.378 Sum_probs=173.8
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+++.|++|.+... .....+.+|+.+++.++||||++ ..++..++||||++|++|.+++... ..+++
T Consensus 22 ~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~ 100 (305)
T cd05609 22 HKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNI-GALPV 100 (305)
T ss_pred ECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHc-CCCCH
Confidence 4567899999987743 23456889999999999999988 5677899999999999999999874 45677
Q ss_pred HHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccC---------CccccccccccCcc
Q 042809 72 GVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN---------GNLKQSWQSIGGTQ 136 (241)
Q Consensus 72 ~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~---------~~~~~~~~~~~~~~ 136 (241)
..+..++. ++||+.|++|+||+|+||+++.++.++|+|||++......... ...........++.
T Consensus 101 ~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (305)
T cd05609 101 DMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTP 180 (305)
T ss_pred HHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCc
Confidence 66665544 4579999999999999999999999999999987631100000 00000111234678
Q ss_pred cccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCC
Q 042809 137 LWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPE 216 (241)
Q Consensus 137 ~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 216 (241)
.|+|||.+.+..++.++|+||||+++|++++|..||.+.............. ...+......+.++.+++++||+.+|.
T Consensus 181 ~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~P~ 259 (305)
T cd05609 181 EYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDD-IEWPEGDEALPADAQDLISRLLRQNPL 259 (305)
T ss_pred cccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc-cCCCCccccCCHHHHHHHHHHhccChh
Confidence 8999999988888999999999999999999999997654333222221111 111222235678899999999999999
Q ss_pred CCCC---hHHHhcCCCCCCCC
Q 042809 217 KRWS---AEELLNHTFISGNA 234 (241)
Q Consensus 217 ~Rps---~~~~l~~p~~~~~~ 234 (241)
+||+ +.++++||||....
T Consensus 260 ~R~~~~~~~~ll~~~~~~~~~ 280 (305)
T cd05609 260 ERLGTGGAFEVKQHRFFLGLD 280 (305)
T ss_pred hccCccCHHHHHhCccccCCC
Confidence 9997 79999999996543
No 170
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=5e-39 Score=253.62 Aligned_cols=224 Identities=23% Similarity=0.358 Sum_probs=161.6
Q ss_pred CCCCcEEEEEeccchHHHHHHHHHHHHHhhcCCCcccc-------cCCceeeeeecccCCCCHHHHHHHh--------CC
Q 042809 3 KGTGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-------NGEKTVNIFMEYMAGGSLLDVAEKF--------GG 67 (241)
Q Consensus 3 ~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~-------~~~~~~~lv~e~~~~~~L~~~l~~~--------~~ 67 (241)
..++..||+|.+........+.+|+.+++.++||||++ ..+...++|+||+. ++|.+++... ..
T Consensus 25 ~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~ 103 (317)
T cd07867 25 GKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE-HDLWHIIKFHRASKANKKPM 103 (317)
T ss_pred CCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-CcHHHHHHhhhccccCCCCc
Confidence 34678999999886655567889999999999999987 34668899999996 5888887532 12
Q ss_pred CCCHHHHHHHHHH------HhhcCCccccCCCCCcEEe----ecCCCeeecCCCcchhhcccccCCccccccccccCccc
Q 042809 68 TLDAGVIRLYTKE------ILHGNGILHCDLKCNNVLL----GSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL 137 (241)
Q Consensus 68 ~~~~~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~----~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (241)
.+++..+..++.| +||+.|++||||||+||++ +.++.++|+|||++......... ........+++.
T Consensus 104 ~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~---~~~~~~~~~t~~ 180 (317)
T cd07867 104 QLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP---LADLDPVVVTFW 180 (317)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCccc---ccccCcceeccc
Confidence 3566666655554 4799999999999999999 45678999999999754331110 111223457889
Q ss_pred ccCcccccc-cCCCchhhHHHHHHHHHHHHhCCCCCccchhchH----------HHHHHHH-------------------
Q 042809 138 WMAPEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAA----------ATLLKIA------------------- 187 (241)
Q Consensus 138 ~~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----------~~~~~~~------------------- 187 (241)
|+|||.+.+ ..++.++||||+|+++|+++||..||.....+.. .......
T Consensus 181 y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (317)
T cd07867 181 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPT 260 (317)
T ss_pred ccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchh
Confidence 999999876 4578999999999999999999999965322100 0000000
Q ss_pred ----hcCCC----------CCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 188 ----CSNEK----------PHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 188 ----~~~~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
..... ..........+.+|+.+||..||.+|||++++++||||
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 261 LQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred hhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 00000 00011123468899999999999999999999999998
No 171
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.6e-38 Score=245.07 Aligned_cols=225 Identities=26% Similarity=0.434 Sum_probs=175.2
Q ss_pred CCCCCcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 2 NKGTGALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
+..+|+.||+|.+.. +...+.+.+|+++++.++||||++ .....+++|+||+++++|.+++.. .+.++...
T Consensus 26 ~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~ 104 (284)
T cd06620 26 HIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKK-GGPIPVEI 104 (284)
T ss_pred EcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHh-ccCCCHHH
Confidence 356789999998653 344677899999999999999988 566889999999999999999887 35677777
Q ss_pred HHHHHHHH------hhc-CCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 74 IRLYTKEI------LHG-NGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 74 ~~~~~~~~------Lh~-~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
+..++.++ ||+ .+++|+||+|+||+++.++.++|+|||++....... .....++..|+|||.+.+
T Consensus 105 ~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~--------~~~~~~~~~~~aPE~~~~ 176 (284)
T cd06620 105 LGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI--------ADTFVGTSTYMSPERIQG 176 (284)
T ss_pred HHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc--------cCccccCcccCCHHHHcc
Confidence 76666544 786 689999999999999999999999999886432211 112457889999999988
Q ss_pred cCCCchhhHHHHHHHHHHHHhCCCCCccchhc--------hHHHHHHHHhcCCCCCCChh-hHHHHHHHHHHhhccCCCC
Q 042809 147 EGLDFATDIWSLGCMVIEMATGRPPWGDKISN--------AAATLLKIACSNEKPHFPTQ-FFKKVLDFLAKCLERKPEK 217 (241)
Q Consensus 147 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~~p~~ 217 (241)
..++.++|+||||+++|++++|..||...... ..............+..+.. .+..+.+++.+||..+|.+
T Consensus 177 ~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~ 256 (284)
T cd06620 177 GKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTE 256 (284)
T ss_pred CCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCccc
Confidence 88899999999999999999999999754331 11112222222222333332 6678999999999999999
Q ss_pred CCChHHHhcCCCCCCCCc
Q 042809 218 RWSAEELLNHTFISGNAK 235 (241)
Q Consensus 218 Rps~~~~l~~p~~~~~~~ 235 (241)
|||++++++||||.....
T Consensus 257 Rpt~~e~~~~~~~~~~~~ 274 (284)
T cd06620 257 RPTPQQLCAMPPFIQALR 274 (284)
T ss_pred CcCHHHHhcCcccccccc
Confidence 999999999999976544
No 172
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.7e-38 Score=247.04 Aligned_cols=222 Identities=28% Similarity=0.370 Sum_probs=167.2
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC--CCCC
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG--GTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~ 70 (241)
++.+|..||+|.+... .....+.+|+.++++++||||++ ..++..++||||+. ++|.+++.... ..++
T Consensus 21 ~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~~~~ 99 (285)
T cd07861 21 NKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-MDLKKYLDSLPKGQYMD 99 (285)
T ss_pred ECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-CCHHHHHhcCCCCCcCC
Confidence 4568999999987632 23466889999999999999988 56788999999997 68999887543 4577
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
...+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||++...... ........+++.|+|||.+
T Consensus 100 ~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~------~~~~~~~~~~~~y~aPE~~ 173 (285)
T cd07861 100 AELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP------VRVYTHEVVTLWYRAPEVL 173 (285)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCC------cccccCCcccccccChHHh
Confidence 77766665544 79999999999999999999999999999998654321 1111223467889999998
Q ss_pred ccc-CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcC-------------------------CCCCCChh
Q 042809 145 RNE-GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN-------------------------EKPHFPTQ 198 (241)
Q Consensus 145 ~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~ 198 (241)
.+. .++.++|+||||+++|++++|+.||.+................ ........
T Consensus 174 ~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (285)
T cd07861 174 LGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKN 253 (285)
T ss_pred cCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCC
Confidence 654 4688999999999999999999999754322111110000000 00001123
Q ss_pred hHHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 199 FFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 199 ~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
++.++.++|++||..+|.+|||+.+++.||||
T Consensus 254 ~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 254 LDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred CCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 56788999999999999999999999999997
No 173
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-39 Score=258.27 Aligned_cols=226 Identities=35% Similarity=0.584 Sum_probs=187.9
Q ss_pred CCCCCcEEEEEecc--chHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHH
Q 042809 2 NKGTGALFVVKSAE--SEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI 74 (241)
Q Consensus 2 ~~~~~~~vaiK~~~--~~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 74 (241)
++.++...|.|++. ++...+.+.-|++||..+.||+|++ ..++.+|++.|||.||-.+..+-+.+.++.+..+
T Consensus 53 nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r~LtE~QI 132 (1187)
T KOG0579|consen 53 NKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLELGRVLTEDQI 132 (1187)
T ss_pred cccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHhHHHHHhccccchHHH
Confidence 56777778888866 4566788999999999999999998 6788999999999999999999998999999999
Q ss_pred HHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc---
Q 042809 75 RLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR--- 145 (241)
Q Consensus 75 ~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~--- 145 (241)
..++.|. ||+++|+|||||..||+++-+|.++|.|||.+-.... .......++|||.|+|||+..
T Consensus 133 qvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~------t~qkRDsFIGTPYWMAPEVvmCET 206 (1187)
T KOG0579|consen 133 QVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS------TRQKRDSFIGTPYWMAPEVVMCET 206 (1187)
T ss_pred HHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchh------HHhhhccccCCcccccchheeecc
Confidence 8887754 7999999999999999999999999999998853221 123446788999999999874
Q ss_pred --ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCC--CCChhhHHHHHHHHHHhhccCCCCCCCh
Q 042809 146 --NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP--HFPTQFFKKVLDFLAKCLERKPEKRWSA 221 (241)
Q Consensus 146 --~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~ 221 (241)
..+|+.++||||||++|.+|..+.+|-... ..+..+++.. +..+| -.|...+..+.+|+++||.+||..||++
T Consensus 207 ~KD~PYDykaDiWSlGITLIEMAqiEPPHhel--npMRVllKia-KSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~a 283 (1187)
T KOG0579|consen 207 FKDQPYDYKADIWSLGITLIEMAQIEPPHHEL--NPMRVLLKIA-KSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPA 283 (1187)
T ss_pred ccCCCchhhhhHHhhhhHHHHHhccCCCcccc--chHHHHHHHh-hcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCH
Confidence 578999999999999999999999998653 2233333322 23333 3466678899999999999999999999
Q ss_pred HHHhcCCCCCCCCcc
Q 042809 222 EELLNHTFISGNAKK 236 (241)
Q Consensus 222 ~~~l~~p~~~~~~~~ 236 (241)
++++.|||+.....+
T Consensus 284 aqll~Hpfv~~~~Sn 298 (1187)
T KOG0579|consen 284 AQLLKHPFVQNAPSN 298 (1187)
T ss_pred HHHhhCcccccCCcc
Confidence 999999999866543
No 174
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2.9e-38 Score=245.80 Aligned_cols=224 Identities=25% Similarity=0.394 Sum_probs=171.8
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHH
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAG 72 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 72 (241)
++.+|..||+|.+... .....+.+|+.++++++|||+++ ..+...++|+||+ +++|.+++......+++.
T Consensus 21 ~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~ 99 (286)
T cd07832 21 DRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEA 99 (286)
T ss_pred ECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CCCHHHHHHhcCCCCCHH
Confidence 4568999999997632 23467889999999999999988 5678899999999 999999998766778888
Q ss_pred HHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 73 VIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 73 ~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
.+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||.+........ .......++..|+|||.+.+
T Consensus 100 ~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~ 174 (286)
T cd07832 100 QVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP-----RLYSHQVATRWYRAPELLYG 174 (286)
T ss_pred HHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-----CccccccCcccccCceeeec
Confidence 777776654 7999999999999999999999999999999876543211 11223457889999999865
Q ss_pred c-CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCC---------------------CC-----CCChhh
Q 042809 147 E-GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNE---------------------KP-----HFPTQF 199 (241)
Q Consensus 147 ~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------~~-----~~~~~~ 199 (241)
. .++.++||||+|+++|++++|.+||................... .. ......
T Consensus 175 ~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (286)
T cd07832 175 ARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDA 254 (286)
T ss_pred cccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCc
Confidence 4 45889999999999999999988886543222111111100000 00 001234
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHhcCCCCC
Q 042809 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFIS 231 (241)
Q Consensus 200 ~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~ 231 (241)
+..+.+++++||..+|.+|||+++++.||||.
T Consensus 255 ~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 255 SPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred cHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 57899999999999999999999999999984
No 175
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=5e-38 Score=240.20 Aligned_cols=218 Identities=22% Similarity=0.323 Sum_probs=170.7
Q ss_pred CCCCCcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 2 NKGTGALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
++.+|+.||+|.+.. ......+.+|++++++++||||++ ......++||||+.+++|.+++...+..+++..
T Consensus 16 ~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 95 (252)
T cd05084 16 LRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKE 95 (252)
T ss_pred EecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHH
Confidence 456899999998663 334567899999999999999988 567789999999999999999987666677777
Q ss_pred HHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccccc
Q 042809 74 IRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNE 147 (241)
Q Consensus 74 ~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~ 147 (241)
+..++.| +||+.|++|+||+|+||+++.++.++|+|||++........ .........+..|+|||.+.+.
T Consensus 96 ~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~ 171 (252)
T cd05084 96 LIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY----ASTGGMKQIPVKWTAPEALNYG 171 (252)
T ss_pred HHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccc----cccCCCCCCceeecCchhhcCC
Confidence 7666654 47999999999999999999999999999999865432110 0001111234569999999988
Q ss_pred CCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 148 GLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 148 ~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
.++.++|+||||+++|++++ |..||............ ........+...+..+.+++.+||+.+|.+|||+.++++
T Consensus 172 ~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 172 RYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAI---EQGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred CCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHH---HcCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 89999999999999999998 89998654433322222 223344555667789999999999999999999999975
No 176
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=4.8e-38 Score=247.75 Aligned_cols=232 Identities=27% Similarity=0.402 Sum_probs=173.9
Q ss_pred CCCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHh-CCCCCH
Q 042809 2 NKGTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF-GGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~ 71 (241)
++.+|+.||+|.+.. ....+.+.+|+.+++.++|+||++ ......+++|||+++++|.+++... ...+++
T Consensus 21 ~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~ 100 (314)
T cd08216 21 HKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPE 100 (314)
T ss_pred ecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcccCCCH
Confidence 456899999999763 345577999999999999999988 5677899999999999999999864 345677
Q ss_pred HHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccC-CccccccccccCcccccCcccc
Q 042809 72 GVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNN-GNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 72 ~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
..+..++.| +||+++++|+||+|+||+++.++.++++|||.+......... ...........++..|+|||.+
T Consensus 101 ~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 180 (314)
T cd08216 101 LAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVL 180 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccccCHHHh
Confidence 766666554 479999999999999999999999999999988654321110 0011111233467789999998
Q ss_pred cc--cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcC--------------------------------
Q 042809 145 RN--EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN-------------------------------- 190 (241)
Q Consensus 145 ~~--~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------------------------------- 190 (241)
.+ ..++.++|+||+|+++|++++|..||........ ........
T Consensus 181 ~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (314)
T cd08216 181 QQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM--LLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDS 258 (314)
T ss_pred cCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHhccCccccccCchhhhcCCcCcccccccccchhhh
Confidence 65 3478899999999999999999999976432211 11111000
Q ss_pred CCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCc
Q 042809 191 EKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAK 235 (241)
Q Consensus 191 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~ 235 (241)
........++.++.+++.+||..+|.+|||++++++||||+.-..
T Consensus 259 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~~ 303 (314)
T cd08216 259 VDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCKR 303 (314)
T ss_pred hhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhcc
Confidence 001112334568899999999999999999999999999987653
No 177
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-40 Score=244.01 Aligned_cols=221 Identities=28% Similarity=0.466 Sum_probs=187.8
Q ss_pred CCCCCcEEEEEeccchH-----HHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESEA-----GVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
.|.||+.||+|+++++. ...--..|-+.|...+||.+.. +..+++|+||||.+||.|+-++.. ...+++
T Consensus 189 EKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLsr-er~FsE 267 (516)
T KOG0690|consen 189 EKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLSR-ERVFSE 267 (516)
T ss_pred ecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccCceEeeehhh-hhcccc
Confidence 47899999999988653 2333456788899999999865 788999999999999999999887 466788
Q ss_pred HHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
...+.+.. .|||++++|.||||.+|.++|.+|.+||+|||+++.-. ........+||||.|+|||++.
T Consensus 268 ~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I------~~g~t~kTFCGTPEYLAPEVle 341 (516)
T KOG0690|consen 268 DRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI------KYGDTTKTFCGTPEYLAPEVLE 341 (516)
T ss_pred hhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcc------cccceeccccCChhhcCchhhc
Confidence 88777655 45899999999999999999999999999999997422 2234456789999999999999
Q ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC-----C
Q 042809 146 NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW-----S 220 (241)
Q Consensus 146 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s 220 (241)
...|..+.|.|.+|+++|||+.|+.||.+.+.+...+++- .....+|..++++...|+..+|.++|++|. .
T Consensus 342 DnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl----~ed~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdD 417 (516)
T KOG0690|consen 342 DNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELIL----MEDLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDD 417 (516)
T ss_pred cccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHH----hhhccCCccCCHHHHHHHHHHhhcChHhhcCCCchh
Confidence 9999999999999999999999999999887766665554 334567888999999999999999999997 7
Q ss_pred hHHHhcCCCCCCC
Q 042809 221 AEELLNHTFISGN 233 (241)
Q Consensus 221 ~~~~l~~p~~~~~ 233 (241)
+.++++|+||+.-
T Consensus 418 akEi~~h~FF~~v 430 (516)
T KOG0690|consen 418 AKEIMRHRFFASV 430 (516)
T ss_pred HHHHHhhhhhccC
Confidence 8999999999754
No 178
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.9e-38 Score=246.80 Aligned_cols=222 Identities=25% Similarity=0.451 Sum_probs=169.2
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHH
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAG 72 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 72 (241)
++.+|+.||+|.+... ...+.+.+|+.++++++|+|+++ ......++||||+++++|..++.. ...+++.
T Consensus 22 ~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~-~~~~~~~ 100 (286)
T cd07847 22 NRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKN-PRGVPEH 100 (286)
T ss_pred ECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhC-CCCCCHH
Confidence 4668999999987632 23356789999999999999988 567789999999998888877664 4457777
Q ss_pred HHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 73 VIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 73 ~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
.+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||++........ ......++..|+|||.+.+
T Consensus 101 ~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~------~~~~~~~~~~~~aPE~~~~ 174 (286)
T cd07847 101 LIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD------DYTDYVATRWYRAPELLVG 174 (286)
T ss_pred HHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcc------cccCcccccccCCHHHHhC
Confidence 777766654 7999999999999999999999999999999976533111 1122346788999999876
Q ss_pred -cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcC--------------------CCCC-------CChh
Q 042809 147 -EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN--------------------EKPH-------FPTQ 198 (241)
Q Consensus 147 -~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------------------~~~~-------~~~~ 198 (241)
..++.++|+||||+++|++++|..||.+................ ..+. ....
T Consensus 175 ~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (286)
T cd07847 175 DTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPN 254 (286)
T ss_pred CCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhcc
Confidence 45788999999999999999999999765433222221111000 0000 0123
Q ss_pred hHHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 199 FFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 199 ~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
.+..+.+++.+||+.+|.+|||+.+++.||||
T Consensus 255 ~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 255 ISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred CCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 46789999999999999999999999999998
No 179
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=4.8e-38 Score=242.18 Aligned_cols=215 Identities=20% Similarity=0.270 Sum_probs=170.4
Q ss_pred CCCcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHH
Q 042809 4 GTGALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIR 75 (241)
Q Consensus 4 ~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 75 (241)
.++..||+|.+... .....+.+|+..+.+++||||++ ...+..++||||+++|+|.+++......+++..+.
T Consensus 31 ~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~ 110 (266)
T cd05064 31 KRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLM 110 (266)
T ss_pred CceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHH
Confidence 56779999997743 33456889999999999999998 56778999999999999999998766677888777
Q ss_pred HHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCC
Q 042809 76 LYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGL 149 (241)
Q Consensus 76 ~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~ 149 (241)
.++.|+ ||++|++||||+|+||+++.++.++++|||.+........ .......++..|+|||.+.+..+
T Consensus 111 ~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~ 185 (266)
T cd05064 111 GMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAI-----YTTMSGKSPVLWAAPEAIQYHHF 185 (266)
T ss_pred HHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccch-----hcccCCCCceeecCHHHHhhCCc
Confidence 776654 7999999999999999999999999999998754321100 01112224568999999999999
Q ss_pred CchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 150 DFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 150 ~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
+.++||||||+++|++++ |..||.+.......... ........+...+..+.+++.+||+.+|.+|||++++++
T Consensus 186 ~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 186 SSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAV---EDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred cchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH---HCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 999999999999999875 99999765443332222 223334456677889999999999999999999999875
No 180
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=3e-38 Score=246.91 Aligned_cols=225 Identities=31% Similarity=0.503 Sum_probs=175.9
Q ss_pred CCCCCcEEEEEeccc--hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHH
Q 042809 2 NKGTGALFVVKSAES--EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI 74 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~--~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 74 (241)
++.+++.||+|.+.. ....+.+.+|+.++..++|||+++ ..++..++|+||+++++|.+++.. ..++...+
T Consensus 42 ~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~--~~~~~~~~ 119 (297)
T cd06659 42 EKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ--TRLNEEQI 119 (297)
T ss_pred EcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHhh--cCCCHHHH
Confidence 456789999999763 233566889999999999999988 567889999999999999998865 45677777
Q ss_pred HHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccC
Q 042809 75 RLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEG 148 (241)
Q Consensus 75 ~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~ 148 (241)
..++.|+ ||+.|++|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+..
T Consensus 120 ~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~ 193 (297)
T cd06659 120 ATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV------PKRKSLVGTPYWMAPEVISRTP 193 (297)
T ss_pred HHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhccccc------ccccceecCccccCHHHHccCC
Confidence 6666654 799999999999999999999999999999986443211 1112345788999999999888
Q ss_pred CCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCC
Q 042809 149 LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHT 228 (241)
Q Consensus 149 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p 228 (241)
++.++|+||||+++|++++|..||.............. ........+...+..+.+++.+||+.+|.+|||++++++||
T Consensus 194 ~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~ 272 (297)
T cd06659 194 YGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD-SPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHP 272 (297)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc-cCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhCh
Confidence 99999999999999999999999975433222221111 11111222345667899999999999999999999999999
Q ss_pred CCCCCCc
Q 042809 229 FISGNAK 235 (241)
Q Consensus 229 ~~~~~~~ 235 (241)
||.....
T Consensus 273 ~~~~~~~ 279 (297)
T cd06659 273 FLLQTGL 279 (297)
T ss_pred hhccCCC
Confidence 9987654
No 181
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=3.2e-38 Score=244.54 Aligned_cols=225 Identities=36% Similarity=0.607 Sum_probs=179.2
Q ss_pred CCCCCcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 2 NKGTGALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
++.++..||+|.... ......+.+|+..+.+++||||++ ..+...++|+||+++++|.+++.. ..++...
T Consensus 25 ~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~--~~~~~~~ 102 (277)
T cd06641 25 DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP--GPLDETQ 102 (277)
T ss_pred ECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhc--CCCCHHH
Confidence 456889999998663 234567889999999999999987 567789999999999999999875 4566776
Q ss_pred HHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccccc
Q 042809 74 IRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNE 147 (241)
Q Consensus 74 ~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~ 147 (241)
+..++.++ ||+.|++|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+.
T Consensus 103 ~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~ 176 (277)
T cd06641 103 IATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ------IKRNTFVGTPFWMAPEVIKQS 176 (277)
T ss_pred HHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccch------hhhccccCCccccChhhhccC
Confidence 66665544 799999999999999999999999999999886443211 111223578889999999888
Q ss_pred CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcC
Q 042809 148 GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227 (241)
Q Consensus 148 ~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 227 (241)
.++.++|+||+|+++|++++|..||........ .........+..+..++.++.+++.+||..+|.+||++.++++|
T Consensus 177 ~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 177 AYDSKADIWSLGITAIELAKGEPPHSELHPMKV---LFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CCCchhhHHHHHHHHHHHHcCCCCCCccchHHH---HHHHhcCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 889999999999999999999999976433222 12222233445566678899999999999999999999999999
Q ss_pred CCCCCCCccC
Q 042809 228 TFISGNAKKN 237 (241)
Q Consensus 228 p~~~~~~~~~ 237 (241)
|||.....+.
T Consensus 254 ~~~~~~~~~~ 263 (277)
T cd06641 254 KFIVRFAKKT 263 (277)
T ss_pred HHHhhhhhcc
Confidence 9998876553
No 182
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=4.7e-38 Score=244.20 Aligned_cols=221 Identities=31% Similarity=0.513 Sum_probs=168.8
Q ss_pred CCCCCcEEEEEeccch-HHHHHHHHHHHHHhhc-CCCcccc-----------cCCceeeeeecccCCCCHHHHHHHh-CC
Q 042809 2 NKGTGALFVVKSAESE-AGVQALRNEAEIRQSL-NSPNIGR-----------NGEKTVNIFMEYMAGGSLLDVAEKF-GG 67 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~-----------~~~~~~~lv~e~~~~~~L~~~l~~~-~~ 67 (241)
++.+++.+|+|.+... .....+..|+.+++++ +|+||++ ......+++|||+.+++|.+++... ..
T Consensus 37 ~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~ 116 (282)
T cd06636 37 HVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGN 116 (282)
T ss_pred EcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCC
Confidence 4568899999987643 3456788999999999 5999987 1246789999999999999999864 34
Q ss_pred CCCHHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCc
Q 042809 68 TLDAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141 (241)
Q Consensus 68 ~~~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aP 141 (241)
.+++..+..++. .+||+.|++|+||+|+||+++.++.++|+|||++....... .......+++.|+||
T Consensus 117 ~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~------~~~~~~~~~~~y~aP 190 (282)
T cd06636 117 ALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV------GRRNTFIGTPYWMAP 190 (282)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhccc------cCCCcccccccccCH
Confidence 466666555554 44899999999999999999999999999999987543211 111234578899999
Q ss_pred cccc-----ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCC
Q 042809 142 EVLR-----NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPE 216 (241)
Q Consensus 142 E~~~-----~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 216 (241)
|.+. +..++.++|+||||+++|++++|..||........ ................++.++.++|.+||+.+|.
T Consensus 191 E~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~ 268 (282)
T cd06636 191 EVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA--LFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYL 268 (282)
T ss_pred hhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh--hhhHhhCCCCCCcccccCHHHHHHHHHHhCCChh
Confidence 9875 34577889999999999999999999965432211 1111111111222335678999999999999999
Q ss_pred CCCChHHHhcCCCC
Q 042809 217 KRWSAEELLNHTFI 230 (241)
Q Consensus 217 ~Rps~~~~l~~p~~ 230 (241)
+|||+.+++.||||
T Consensus 269 ~Rp~~~ell~~~~~ 282 (282)
T cd06636 269 SRPSTEQLLKHPFI 282 (282)
T ss_pred hCcCHHHHhcCCCC
Confidence 99999999999997
No 183
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=3.8e-38 Score=242.32 Aligned_cols=226 Identities=35% Similarity=0.604 Sum_probs=176.3
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
+..+|+.+++|.+... ...+.+.+|++++++++||||++ ..+...|+|+||+.+++|.+++...+ .+++
T Consensus 14 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~ 92 (265)
T cd05579 14 KKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVG-SLDE 92 (265)
T ss_pred ECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcHHHHHHHcC-CCCH
Confidence 4567999999997643 34567899999999999999988 56788999999999999999998743 6777
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCC--ccccccccccCcccccCccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNG--NLKQSWQSIGGTQLWMAPEV 143 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~aPE~ 143 (241)
..+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||++.......... ..........++..|+|||.
T Consensus 93 ~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~ 172 (265)
T cd05579 93 DVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEV 172 (265)
T ss_pred HHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHH
Confidence 7777666654 799999999999999999999999999999987543211100 00011223446788999999
Q ss_pred ccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChh--hHHHHHHHHHHhhccCCCCCCCh
Q 042809 144 LRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQ--FFKKVLDFLAKCLERKPEKRWSA 221 (241)
Q Consensus 144 ~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~~~l~~~p~~Rps~ 221 (241)
..+...+.++|+||||+++|++++|..||............. ......+.. .+..+.+++++||+.+|.+|||+
T Consensus 173 ~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~ 248 (265)
T cd05579 173 ILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNIL----NGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGA 248 (265)
T ss_pred hcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh----cCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCC
Confidence 988888899999999999999999999997654333222211 112223333 37899999999999999999999
Q ss_pred ---HHHhcCCCCCC
Q 042809 222 ---EELLNHTFISG 232 (241)
Q Consensus 222 ---~~~l~~p~~~~ 232 (241)
.+++.||||+.
T Consensus 249 ~~~~~~l~~~~~~~ 262 (265)
T cd05579 249 KSIEEIKNHPFFKG 262 (265)
T ss_pred ccHHHHhcCccccC
Confidence 99999999974
No 184
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=4.3e-38 Score=242.41 Aligned_cols=223 Identities=35% Similarity=0.616 Sum_probs=173.8
Q ss_pred CCCCcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC--CCCCHH
Q 042809 3 KGTGALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG--GTLDAG 72 (241)
Q Consensus 3 ~~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~ 72 (241)
+.++..+++|.+..+ .....+.+|++.++.++|+|+++ ..+...++|+|++++++|.+++.... ..+++.
T Consensus 23 ~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~ 102 (267)
T cd06610 23 LPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEA 102 (267)
T ss_pred cCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHH
Confidence 457889999987632 35677999999999999999988 56788999999999999999998642 356777
Q ss_pred HHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 73 VIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 73 ~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
.+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||++.......... ........++..|+|||.+..
T Consensus 103 ~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~--~~~~~~~~~~~~y~~Pe~~~~ 180 (267)
T cd06610 103 IIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRT--RKVRKTFVGTPCWMAPEVMEQ 180 (267)
T ss_pred HHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcccc--ccccccccCChhhcChHHHcc
Confidence 776666554 799999999999999999999999999999987654422111 011233457889999999876
Q ss_pred c-CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCC-----hhhHHHHHHHHHHhhccCCCCCCC
Q 042809 147 E-GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP-----TQFFKKVLDFLAKCLERKPEKRWS 220 (241)
Q Consensus 147 ~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps 220 (241)
. .++.++|+||||+++|++++|..||........ ... ......+..+ ..++..+.+++.+||..+|.+|||
T Consensus 181 ~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~ 257 (267)
T cd06610 181 VHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV--LML-TLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPT 257 (267)
T ss_pred ccCcCcccchHhHhHHHHHHHhCCCCccccChhhh--HHH-HhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcC
Confidence 6 678999999999999999999999976433221 111 1111222221 245688999999999999999999
Q ss_pred hHHHhcCCCC
Q 042809 221 AEELLNHTFI 230 (241)
Q Consensus 221 ~~~~l~~p~~ 230 (241)
+++++.||||
T Consensus 258 ~~~ll~~p~~ 267 (267)
T cd06610 258 AEELLKHKFF 267 (267)
T ss_pred HHHHhhCCCC
Confidence 9999999997
No 185
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=4.1e-38 Score=245.53 Aligned_cols=227 Identities=30% Similarity=0.482 Sum_probs=177.1
Q ss_pred CCCCCcEEEEEeccc--hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHH
Q 042809 2 NKGTGALFVVKSAES--EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI 74 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~--~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 74 (241)
++.+|..||+|.+.. ......+.+|+.+++.++|+|+++ ...+..++||||+++++|.+++.. ..++...+
T Consensus 41 ~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~ 118 (292)
T cd06657 41 VKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQI 118 (292)
T ss_pred EcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHhc--CCCCHHHH
Confidence 356889999998753 334566889999999999999988 567889999999999999998764 45677666
Q ss_pred HHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccC
Q 042809 75 RLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEG 148 (241)
Q Consensus 75 ~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~ 148 (241)
..++.|+ ||+.|++||||+|+||+++.++.++|+|||++....... .......+++.|+|||.+.+..
T Consensus 119 ~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~------~~~~~~~~~~~y~~pE~~~~~~ 192 (292)
T cd06657 119 AAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV------PRRKSLVGTPYWMAPELISRLP 192 (292)
T ss_pred HHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceeccccc------ccccccccCccccCHHHhcCCC
Confidence 6666544 799999999999999999999999999999876443211 1122345788899999998888
Q ss_pred CCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCC
Q 042809 149 LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHT 228 (241)
Q Consensus 149 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p 228 (241)
++.++|+||+|+++|++++|..||................. .........+..+.+++.+||..+|.+||++.+++.||
T Consensus 193 ~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~ 271 (292)
T cd06657 193 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-PKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHP 271 (292)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCC-cccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcCh
Confidence 89999999999999999999999976433332222221111 11112234677899999999999999999999999999
Q ss_pred CCCCCCccC
Q 042809 229 FISGNAKKN 237 (241)
Q Consensus 229 ~~~~~~~~~ 237 (241)
||......+
T Consensus 272 ~~~~~~~~~ 280 (292)
T cd06657 272 FLAKAGPPS 280 (292)
T ss_pred HHhccCCCc
Confidence 998877544
No 186
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=9e-38 Score=242.33 Aligned_cols=217 Identities=23% Similarity=0.366 Sum_probs=168.3
Q ss_pred CCCCcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC--------
Q 042809 3 KGTGALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG-------- 66 (241)
Q Consensus 3 ~~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~-------- 66 (241)
..++..||+|.+... ...+.+.+|+++++.++|+||++ ......++||||+++++|.+++...+
T Consensus 32 ~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~ 111 (280)
T cd05049 32 ENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKS 111 (280)
T ss_pred cCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcc
Confidence 356789999998743 24577999999999999999988 56678999999999999999998643
Q ss_pred -----CCCCHHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCc
Q 042809 67 -----GTLDAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGT 135 (241)
Q Consensus 67 -----~~~~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~ 135 (241)
..+++..+..++. ++||++|++|+||+|+||+++.++.++|+|||++........ ........++
T Consensus 112 ~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~----~~~~~~~~~~ 187 (280)
T cd05049 112 PDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDY----YRVGGHTMLP 187 (280)
T ss_pred cccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccceecccCcc----eecCCCCccc
Confidence 2345555555544 447999999999999999999999999999999864322110 0111122346
Q ss_pred ccccCcccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccC
Q 042809 136 QLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERK 214 (241)
Q Consensus 136 ~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 214 (241)
+.|+|||.+.+..++.++||||||+++|++++ |..||............. .+.....+...+..+.+++++||..+
T Consensus 188 ~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~~l~~~ 264 (280)
T cd05049 188 IRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECIT---QGRLLQRPRTCPSEVYDIMLGCWKRD 264 (280)
T ss_pred ceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH---cCCcCCCCCCCCHHHHHHHHHHcCCC
Confidence 78999999999999999999999999999998 999997654433322222 23333445567889999999999999
Q ss_pred CCCCCChHHHhc
Q 042809 215 PEKRWSAEELLN 226 (241)
Q Consensus 215 p~~Rps~~~~l~ 226 (241)
|.+|||++++++
T Consensus 265 p~~Rp~~~eil~ 276 (280)
T cd05049 265 PQQRINIKDIHE 276 (280)
T ss_pred cccCCCHHHHHH
Confidence 999999999975
No 187
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=4.5e-38 Score=241.52 Aligned_cols=221 Identities=27% Similarity=0.467 Sum_probs=169.0
Q ss_pred CCCCCcEEEEEeccchH-----HHHHHHHHHHHH-hhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 2 NKGTGALFVVKSAESEA-----GVQALRNEAEIR-QSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l-~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
++.+|+.||+|.+.... ....+..|..++ ....|+|+++ ..++..|+|+||+++++|.+++... ..++
T Consensus 17 ~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~ 95 (260)
T cd05611 17 KRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTL-GGLP 95 (260)
T ss_pred ecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHc-CCCC
Confidence 45688999999986432 223344555444 4457999988 5667899999999999999999873 4567
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
...+..++.|+ ||+.+++|+||+|+||+++.++.++|+|||.+..... .....++..|+|||.+
T Consensus 96 ~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----------~~~~~~~~~y~~pe~~ 165 (260)
T cd05611 96 EDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----------NKKFVGTPDYLAPETI 165 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc----------cccCCCCcCccChhhh
Confidence 77776666554 7999999999999999999999999999998864322 1123467889999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC---Ch
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW---SA 221 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~ 221 (241)
.+..++.++|+||+|+++|++++|..||..........................++..+.+++.+||+.+|.+|| ++
T Consensus 166 ~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~ 245 (260)
T cd05611 166 LGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGY 245 (260)
T ss_pred cCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcH
Confidence 888789999999999999999999999976544333222222111222233345678999999999999999999 55
Q ss_pred HHHhcCCCCCCC
Q 042809 222 EELLNHTFISGN 233 (241)
Q Consensus 222 ~~~l~~p~~~~~ 233 (241)
++++.||||+..
T Consensus 246 ~~~l~~~~~~~~ 257 (260)
T cd05611 246 QEIKSHPFFKSI 257 (260)
T ss_pred HHHHcChHhhcC
Confidence 899999999653
No 188
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=7.4e-38 Score=240.75 Aligned_cols=217 Identities=24% Similarity=0.379 Sum_probs=171.5
Q ss_pred CCCCCcEEEEEeccch-HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC-CCCCHHHH
Q 042809 2 NKGTGALFVVKSAESE-AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG-GTLDAGVI 74 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~ 74 (241)
++++++.||+|.+... .....+.+|++.+++++|+||++ ..++..++||||+++++|.+++.... ..++...+
T Consensus 27 ~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~ 106 (263)
T cd05052 27 WKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 106 (263)
T ss_pred EecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHH
Confidence 4567899999997743 33567899999999999999988 56778999999999999999997643 34677766
Q ss_pred HHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccC
Q 042809 75 RLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEG 148 (241)
Q Consensus 75 ~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~ 148 (241)
..++.|+ ||++|++||||+|+||+++.++.++|+|||.+........ .......++..|+|||.+.+..
T Consensus 107 ~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~ 181 (263)
T cd05052 107 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-----TAHAGAKFPIKWTAPESLAYNK 181 (263)
T ss_pred HHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCcccccccccee-----eccCCCCCccccCCHHHhccCC
Confidence 6665544 7999999999999999999999999999999875433111 1111122356799999999888
Q ss_pred CCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 149 LDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 149 ~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
++.++|+||||+++|++++ |..||.+...... ............+...+..+.+++.+||..+|.+|||+.++++
T Consensus 182 ~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 182 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---YELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred CCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH---HHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 9999999999999999998 9999976543332 2222233445566778889999999999999999999999975
No 189
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.1e-37 Score=239.72 Aligned_cols=224 Identities=38% Similarity=0.663 Sum_probs=174.5
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHH
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAG 72 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 72 (241)
+..+++.|++|.+... .....+.+|+.+++.++|+||++ ...+..++|+||+++++|.+++... ..++..
T Consensus 21 ~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~ 99 (264)
T cd06626 21 NLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHG-RILDEH 99 (264)
T ss_pred ECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCCcHHHHHhhc-CCCChH
Confidence 4567899999997732 34677999999999999999988 5677899999999999999999873 446666
Q ss_pred HHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 73 VIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 73 ~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
.+..++.+ +||+.|++|+||+|+||+++.++.++|+|||.+........... .......++..|+|||.+.+
T Consensus 100 ~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~ 177 (264)
T cd06626 100 VIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMG--EEVQSLAGTPAYMAPEVITG 177 (264)
T ss_pred HHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCccc--ccccCCcCCcCccChhhccC
Confidence 66665554 47999999999999999999999999999999876543221111 10123457889999999987
Q ss_pred cC---CCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhh--HHHHHHHHHHhhccCCCCCCCh
Q 042809 147 EG---LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQF--FKKVLDFLAKCLERKPEKRWSA 221 (241)
Q Consensus 147 ~~---~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~li~~~l~~~p~~Rps~ 221 (241)
.. .+.++|+||||+++|++++|+.||........ ..........+..+... +..+.+++++||+.+|.+|||+
T Consensus 178 ~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~ 255 (264)
T cd06626 178 GKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ--IMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTA 255 (264)
T ss_pred CCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH--HHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCH
Confidence 65 78899999999999999999999965432221 11112223344444443 7889999999999999999999
Q ss_pred HHHhcCCCC
Q 042809 222 EELLNHTFI 230 (241)
Q Consensus 222 ~~~l~~p~~ 230 (241)
++++.|||+
T Consensus 256 ~~i~~~~~~ 264 (264)
T cd06626 256 SELLQHPFV 264 (264)
T ss_pred HHHhcCCCC
Confidence 999999996
No 190
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=6.5e-38 Score=244.46 Aligned_cols=221 Identities=35% Similarity=0.549 Sum_probs=168.5
Q ss_pred CCCCCcEEEEEeccch-HHHHHHHHHHHHHhhc-CCCcccc------c----CCceeeeeecccCCCCHHHHHHH---hC
Q 042809 2 NKGTGALFVVKSAESE-AGVQALRNEAEIRQSL-NSPNIGR------N----GEKTVNIFMEYMAGGSLLDVAEK---FG 66 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~------~----~~~~~~lv~e~~~~~~L~~~l~~---~~ 66 (241)
++.+++.+|+|.+... .....+.+|+.++.++ +|||+++ . ..+..++|+||+++++|.+++.. .+
T Consensus 43 ~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~ 122 (291)
T cd06639 43 NKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICG 122 (291)
T ss_pred ECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcC
Confidence 4578999999998743 3346678899999999 7999988 1 23578999999999999998864 24
Q ss_pred CCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccC
Q 042809 67 GTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMA 140 (241)
Q Consensus 67 ~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 140 (241)
..+++..++.++.|+ ||+.|++|+||+|+||+++.++.++|+|||.+........ ......++..|+|
T Consensus 123 ~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~------~~~~~~~~~~y~a 196 (291)
T cd06639 123 QRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL------RRNTSVGTPFWMA 196 (291)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhcccccc------cccCccCCccccC
Confidence 567777776666544 7999999999999999999999999999999875432111 1122347888999
Q ss_pred ccccccc-----CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCC--CCChhhHHHHHHHHHHhhcc
Q 042809 141 PEVLRNE-----GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP--HFPTQFFKKVLDFLAKCLER 213 (241)
Q Consensus 141 PE~~~~~-----~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~ 213 (241)
||.+... .++.++|+||||+++|++++|+.||........ ..... ....+ ..+...+..+.++|.+||+.
T Consensus 197 PE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~ 273 (291)
T cd06639 197 PEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT--LFKIP-RNPPPTLLHPEKWCRSFNHFISQCLIK 273 (291)
T ss_pred hhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH--HHHHh-cCCCCCCCcccccCHHHHHHHHHHhhc
Confidence 9998543 257899999999999999999999976432222 11111 11111 22334567899999999999
Q ss_pred CCCCCCChHHHhcCCCCC
Q 042809 214 KPEKRWSAEELLNHTFIS 231 (241)
Q Consensus 214 ~p~~Rps~~~~l~~p~~~ 231 (241)
+|.+|||+.++++||||+
T Consensus 274 ~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 274 DFEARPSVTHLLEHPFIK 291 (291)
T ss_pred ChhhCcCHHHHhcCcccC
Confidence 999999999999999995
No 191
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=5.2e-38 Score=242.02 Aligned_cols=216 Identities=25% Similarity=0.421 Sum_probs=167.0
Q ss_pred CCCCCcEEEEEeccchHHHHHHHHHHHHHhhc-CCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHH
Q 042809 2 NKGTGALFVVKSAESEAGVQALRNEAEIRQSL-NSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIR 75 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l-~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 75 (241)
++.+|..+|+|.+...... .. |+.....+ +|||+++ ...+..++||||+++++|.+++... ..+++..+.
T Consensus 37 ~~~~~~~~~~k~~~~~~~~-~~--e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~-~~l~~~~~~ 112 (267)
T PHA03390 37 HKPTQKLFVQKIIKAKNFN-AI--EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKE-GKLSEAEVK 112 (267)
T ss_pred EcCCCcEEEEEEEehhhcc-hh--hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhc-CCCCHHHHH
Confidence 4678899999998754311 11 22222222 6999988 5567899999999999999999874 478888888
Q ss_pred HHHHHH------hhcCCccccCCCCCcEEeecCC-CeeecCCCcchhhcccccCCccccccccccCcccccCcccccccC
Q 042809 76 LYTKEI------LHGNGILHCDLKCNNVLLGSHG-DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEG 148 (241)
Q Consensus 76 ~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~ 148 (241)
.++.|+ ||+.|++|+||+|+||+++.++ .++|+|||.+...... ....++..|+|||.+.+..
T Consensus 113 ~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~----------~~~~~~~~y~aPE~~~~~~ 182 (267)
T PHA03390 113 KIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP----------SCYDGTLDYFSPEKIKGHN 182 (267)
T ss_pred HHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC----------ccCCCCCcccChhhhcCCC
Confidence 777655 7999999999999999999988 9999999988654321 1234788999999999888
Q ss_pred CCchhhHHHHHHHHHHHHhCCCCCccchhchHH-HHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCC-hHHHhc
Q 042809 149 LDFATDIWSLGCMVIEMATGRPPWGDKISNAAA-TLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWS-AEELLN 226 (241)
Q Consensus 149 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps-~~~~l~ 226 (241)
++.++|+||+|+++|++++|..||......... ....... ......+...+..+.+++.+||+.+|.+||+ ++++++
T Consensus 183 ~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 183 YDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred CCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 999999999999999999999999754333221 1111111 2333445568889999999999999999995 699999
Q ss_pred CCCCCC
Q 042809 227 HTFISG 232 (241)
Q Consensus 227 ~p~~~~ 232 (241)
||||+.
T Consensus 262 h~~~~~ 267 (267)
T PHA03390 262 HPFLKI 267 (267)
T ss_pred CCcccC
Confidence 999964
No 192
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.3e-37 Score=238.69 Aligned_cols=217 Identities=22% Similarity=0.302 Sum_probs=170.4
Q ss_pred CCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCcccc----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHH
Q 042809 3 KGTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI 74 (241)
Q Consensus 3 ~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 74 (241)
++++..+|+|.+.. ....+.+.+|+.+++.+.||||++ ......++||||+++++|.+++.. ...++...+
T Consensus 19 ~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~ 97 (257)
T cd05116 19 KKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGPLNKFLQK-NKHVTEKNI 97 (257)
T ss_pred CCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCcHHHHHHh-cCCCCHHHH
Confidence 56789999998763 234567899999999999999988 345678999999999999999986 356777777
Q ss_pred HHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccC
Q 042809 75 RLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEG 148 (241)
Q Consensus 75 ~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~ 148 (241)
..++.|+ ||++|++||||+|+||+++.++.++|+|||++........ .........++..|+|||.+....
T Consensus 98 ~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~ 174 (257)
T cd05116 98 TELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADEN---YYKAKTHGKWPVKWYAPECMNYYK 174 (257)
T ss_pred HHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCC---eeeecCCCCCCccccCHhHhccCC
Confidence 7766654 7999999999999999999999999999999875432111 000111122357899999998888
Q ss_pred CCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 149 LDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 149 ~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
++.++|+||||+++|++++ |..||........... ......+..+...+.++.++|.+||+.+|.+|||++++..
T Consensus 175 ~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~---i~~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 175 FSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQM---IESGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred cCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH---HHCCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 8999999999999999998 9999976543332222 2234455667778899999999999999999999999865
No 193
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=7.2e-38 Score=239.88 Aligned_cols=223 Identities=51% Similarity=0.864 Sum_probs=179.6
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-----cCC--ceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-----NGE--KTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-----~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
++.+++.|++|.+... ...+.+.+|+..+++++|+||++ ... ...++|+||+++++|.+++.... .++
T Consensus 21 ~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~ 99 (260)
T cd06606 21 DKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFG-KLP 99 (260)
T ss_pred ECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcC-CCC
Confidence 4568999999997743 34778999999999999999988 344 78999999999999999998753 677
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
...+..++.++ ||+.|++|+||+|+||+++.++.++|+|||.+......... .......++..|.|||.+
T Consensus 100 ~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~----~~~~~~~~~~~y~~pE~~ 175 (260)
T cd06606 100 EPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG----EGTGSVRGTPYWMAPEVI 175 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc----ccccCCCCCccccCHhhh
Confidence 77776666544 79999999999999999999999999999998765442210 012234578889999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHH
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 224 (241)
.+...+.++|+||||++++++++|..||.... ...............+..+...+..+.+++.+|+..+|.+||++.++
T Consensus 176 ~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~l 254 (260)
T cd06606 176 RGEEYGRAADIWSLGCTVIEMATGKPPWSELG-NPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADEL 254 (260)
T ss_pred cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-chHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHH
Confidence 88888999999999999999999999997754 12222222222234455666778899999999999999999999999
Q ss_pred hcCCCC
Q 042809 225 LNHTFI 230 (241)
Q Consensus 225 l~~p~~ 230 (241)
+.||||
T Consensus 255 l~~~~~ 260 (260)
T cd06606 255 LQHPFL 260 (260)
T ss_pred hhCCCC
Confidence 999997
No 194
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.3e-38 Score=242.92 Aligned_cols=218 Identities=28% Similarity=0.415 Sum_probs=167.8
Q ss_pred CCCCCcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHh-CCCCCHH
Q 042809 2 NKGTGALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF-GGTLDAG 72 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~ 72 (241)
+...+..|+||.+.. ....+.+.+|++.+++++||||++ ...+..++|+||+++|+|.+++... ...++..
T Consensus 24 ~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~ 103 (259)
T PF07714_consen 24 DNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQ 103 (259)
T ss_dssp TTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHH
T ss_pred cCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 456788999999863 344788999999999999999998 5556699999999999999999986 5678888
Q ss_pred HHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 73 VIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 73 ~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
....++.|+ ||+++++|++|+++||+++.++.+||+|||++....... .............|+|||.+.+
T Consensus 104 ~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~----~~~~~~~~~~~~~~~aPE~~~~ 179 (259)
T PF07714_consen 104 QRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS----KYKNDSSQQLPLRYLAPEVLKD 179 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSS----SEEESTTSESGGGGS-HHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccc----cccccccccccccccccccccc
Confidence 877776655 799999999999999999999999999999997652210 0111222335678999999998
Q ss_pred cCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHh
Q 042809 147 EGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225 (241)
Q Consensus 147 ~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l 225 (241)
..++.++||||||+++||+++ |+.||.+........ ..........+...+..+.+++.+||+.+|.+|||+.+++
T Consensus 180 ~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~ 256 (259)
T PF07714_consen 180 GEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIE---KLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEIL 256 (259)
T ss_dssp SEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHH---HHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccc---cccccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 889999999999999999999 789987754433222 2233444555667788999999999999999999999997
Q ss_pred c
Q 042809 226 N 226 (241)
Q Consensus 226 ~ 226 (241)
+
T Consensus 257 ~ 257 (259)
T PF07714_consen 257 Q 257 (259)
T ss_dssp H
T ss_pred h
Confidence 5
No 195
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3e-38 Score=243.41 Aligned_cols=219 Identities=35% Similarity=0.491 Sum_probs=167.9
Q ss_pred CCCCCcEEEEEeccch--HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHH
Q 042809 2 NKGTGALFVVKSAESE--AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI 74 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 74 (241)
++.+|+.||+|.+... .....+.+|+.++.+++||||++ ..+...++|+||+++++|.+++.. ...++...+
T Consensus 30 ~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~ 108 (267)
T cd06646 30 NLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHV-TGPLSELQI 108 (267)
T ss_pred ECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHH
Confidence 4578899999997643 33456889999999999999988 567789999999999999999876 356777776
Q ss_pred HHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc---
Q 042809 75 RLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR--- 145 (241)
Q Consensus 75 ~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~--- 145 (241)
..++.|+ ||+.|++|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+.
T Consensus 109 ~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~ 182 (267)
T cd06646 109 AYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI------AKRKSFIGTPYWMAPEVAAVEK 182 (267)
T ss_pred HHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccc------cccCccccCccccCHhHccccc
Confidence 6666544 799999999999999999999999999999987543211 1112334788899999884
Q ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCC---CCChhhHHHHHHHHHHhhccCCCCCCChH
Q 042809 146 NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP---HFPTQFFKKVLDFLAKCLERKPEKRWSAE 222 (241)
Q Consensus 146 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 222 (241)
...++.++|+||+|+++|++++|+.||......... .........+ .....++..+.+++++||..+|.+|||++
T Consensus 183 ~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~ 260 (267)
T cd06646 183 NGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL--FLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAE 260 (267)
T ss_pred CCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh--eeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHH
Confidence 344678999999999999999999998654221111 1100111111 11234567899999999999999999999
Q ss_pred HHhcCCC
Q 042809 223 ELLNHTF 229 (241)
Q Consensus 223 ~~l~~p~ 229 (241)
++++|+|
T Consensus 261 ~il~~l~ 267 (267)
T cd06646 261 RLLTHLF 267 (267)
T ss_pred HHhcCCC
Confidence 9999998
No 196
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-38 Score=270.08 Aligned_cols=213 Identities=25% Similarity=0.396 Sum_probs=176.3
Q ss_pred cEEEEEecc---chHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHh------CCCCCHH
Q 042809 7 ALFVVKSAE---SEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF------GGTLDAG 72 (241)
Q Consensus 7 ~~vaiK~~~---~~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~------~~~~~~~ 72 (241)
..||+|.+. +......|.+|+.+|+.++||||++ ......+|++|||+||+|..||++. ...+...
T Consensus 723 ~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~ 802 (1025)
T KOG1095|consen 723 IQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMR 802 (1025)
T ss_pred eEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHH
Confidence 458888876 4566788999999999999999998 5688999999999999999999986 5567788
Q ss_pred HHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 73 VIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 73 ~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
....++.++ |+++++|||||..+|||++....+||+|||+|+-+-.. ...+......-...|+|||.+..
T Consensus 803 dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~----~yyr~~~~a~lPvkWm~PEsl~d 878 (1025)
T KOG1095|consen 803 DLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDK----DYYRKHGEAMLPVKWMPPESLKD 878 (1025)
T ss_pred HHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhHhhhhc----hheeccCccccceecCCHHHHhh
Confidence 877777754 89999999999999999999999999999999843221 11111111223567999999999
Q ss_pred cCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHh
Q 042809 147 EGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225 (241)
Q Consensus 147 ~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l 225 (241)
+.++.++||||||+++||++| |..||.+........ ....+.+.+.|..++..++++|.+||+.+|.+||++..++
T Consensus 879 ~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~---~~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~ 955 (1025)
T KOG1095|consen 879 GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLL---DVLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIV 955 (1025)
T ss_pred cccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHH---HHHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHH
Confidence 999999999999999999999 999998764444333 2233447777888999999999999999999999999998
Q ss_pred c
Q 042809 226 N 226 (241)
Q Consensus 226 ~ 226 (241)
+
T Consensus 956 ~ 956 (1025)
T KOG1095|consen 956 E 956 (1025)
T ss_pred h
Confidence 6
No 197
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=6.1e-38 Score=246.60 Aligned_cols=226 Identities=23% Similarity=0.325 Sum_probs=170.0
Q ss_pred CCCCCcEEEEEeccchH----HHHHHHHHHHHHhhcCCCcccc-------cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 2 NKGTGALFVVKSAESEA----GVQALRNEAEIRQSLNSPNIGR-------NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~-------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
++.+|..||+|.+..+. ....+.+|+.++++++|+||++ ...+..++||||+. ++|.+++......++
T Consensus 28 ~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~l~ 106 (309)
T cd07845 28 DTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCE-QDLASLLDNMPTPFS 106 (309)
T ss_pred ECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCC-CCHHHHHHhcccCCC
Confidence 56789999999976322 1234668999999999999987 22356899999996 589998887556677
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
...+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||.+....... .......+++.|+|||.+
T Consensus 107 ~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~------~~~~~~~~~~~y~aPE~~ 180 (309)
T cd07845 107 ESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA------KPMTPKVVTLWYRAPELL 180 (309)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCcc------CCCCcccccccccChhhh
Confidence 87777776655 799999999999999999999999999999987654311 111122346789999998
Q ss_pred cc-cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCC---------------CCC-----------Ch
Q 042809 145 RN-EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEK---------------PHF-----------PT 197 (241)
Q Consensus 145 ~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---------------~~~-----------~~ 197 (241)
.+ ..++.++|+||+|+++|++++|..||...+................ ... ..
T Consensus 181 ~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (309)
T cd07845 181 LGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFP 260 (309)
T ss_pred cCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhcc
Confidence 75 4578899999999999999999999976544333222222111000 000 01
Q ss_pred hhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCC
Q 042809 198 QFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNA 234 (241)
Q Consensus 198 ~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~ 234 (241)
..++.+.++|++||+.||.+|||++++++||||+..+
T Consensus 261 ~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~ 297 (309)
T cd07845 261 WLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKP 297 (309)
T ss_pred ccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCC
Confidence 2467889999999999999999999999999998554
No 198
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-39 Score=271.94 Aligned_cols=224 Identities=32% Similarity=0.465 Sum_probs=181.8
Q ss_pred CCCCCCcEEEEEeccc-----hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 1 MNKGTGALFVVKSAES-----EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
+++.|+++||+|++.+ ......|+.|-.+|.--..+=|+. +++.++|+||||++||+|-.++...+ +++
T Consensus 95 r~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~-~~p 173 (1317)
T KOG0612|consen 95 RHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYMPGGDLLTLLSKFD-RLP 173 (1317)
T ss_pred EeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEecccCchHHHHHhhcC-CCh
Confidence 3578999999999886 344566888888888777777776 89999999999999999999999977 899
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+.++++|+..+ ||+.|+|||||||+|||+|..|.+||+|||.+....... .-......|||-|+|||++
T Consensus 174 E~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG-----~V~s~~aVGTPDYISPEvL 248 (1317)
T KOG0612|consen 174 EDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADG-----TVRSSVAVGTPDYISPEVL 248 (1317)
T ss_pred HHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCC-----cEEeccccCCCCccCHHHH
Confidence 99999998866 799999999999999999999999999999997665311 1233456799999999999
Q ss_pred c----c-cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCC--hhhHHHHHHHHHHhhccCCCC
Q 042809 145 R----N-EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP--TQFFKKVLDFLAKCLERKPEK 217 (241)
Q Consensus 145 ~----~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~ 217 (241)
. + +.|++.+|.||+|+++|||+.|..||....-... +-+.........+| ..+++++.+||++++. +|..
T Consensus 249 qs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveT--Y~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~ 325 (1317)
T KOG0612|consen 249 QSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVET--YGKIMNHKESLSFPDETDVSEEAKDLIEALLC-DREV 325 (1317)
T ss_pred HhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHH--HHHHhchhhhcCCCcccccCHHHHHHHHHHhc-Chhh
Confidence 5 3 5688999999999999999999999976432222 11222222233344 5689999999999875 6999
Q ss_pred CCC---hHHHhcCCCCCCC
Q 042809 218 RWS---AEELLNHTFISGN 233 (241)
Q Consensus 218 Rps---~~~~l~~p~~~~~ 233 (241)
|.. ++++..||||.+-
T Consensus 326 RLgrngiedik~HpFF~g~ 344 (1317)
T KOG0612|consen 326 RLGRNGIEDIKNHPFFEGI 344 (1317)
T ss_pred hcccccHHHHHhCccccCC
Confidence 997 9999999999764
No 199
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.1e-37 Score=238.88 Aligned_cols=220 Identities=25% Similarity=0.423 Sum_probs=173.8
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC-CCCCH
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG-GTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~ 71 (241)
++.+|..+|+|.+... ...+.+.+|+.+++.++|+||++ ......++|+||+.+++|.+++.... ..+++
T Consensus 21 ~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~ 100 (257)
T cd08225 21 AKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSE 100 (257)
T ss_pred EcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCH
Confidence 4567899999998643 34567889999999999999988 66778999999999999999997643 34666
Q ss_pred HHHHHHHH------HHhhcCCccccCCCCCcEEeecCCC-eeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 72 GVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGD-VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 72 ~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~-~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
..+..++. ++||+.+++|+||+|+||+++.++. ++|+|||.+........ ......|++.|+|||.+
T Consensus 101 ~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~------~~~~~~~~~~~~ape~~ 174 (257)
T cd08225 101 DQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME------LAYTCVGTPYYLSPEIC 174 (257)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcc------cccccCCCccccCHHHH
Confidence 66665554 4479999999999999999988865 69999998876543111 11223578889999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHH
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 224 (241)
.+..++.++|+||||++++++++|..||........ ................+.++.+++.+||..+|++|||+.++
T Consensus 175 ~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l 251 (257)
T cd08225 175 QNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQL---VLKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSI 251 (257)
T ss_pred cCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH---HHHHhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHH
Confidence 888889999999999999999999999975433222 22222233334445667899999999999999999999999
Q ss_pred hcCCCC
Q 042809 225 LNHTFI 230 (241)
Q Consensus 225 l~~p~~ 230 (241)
+.||||
T Consensus 252 l~~~~~ 257 (257)
T cd08225 252 LKRPFL 257 (257)
T ss_pred hhCCCC
Confidence 999997
No 200
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.1e-37 Score=240.86 Aligned_cols=222 Identities=37% Similarity=0.694 Sum_probs=170.0
Q ss_pred CCCCCcEEEEEeccch------------HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHH
Q 042809 2 NKGTGALFVVKSAESE------------AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEK 64 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~------------~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~ 64 (241)
++.+|+.||+|.+... ...+.+.+|+.+++.++|||+++ ......++|+||+.+++|.+++..
T Consensus 22 ~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 101 (272)
T cd06629 22 NVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRT 101 (272)
T ss_pred ecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCceEEEEecCCCCcHHHHHhh
Confidence 4568999999986521 12346788999999999999987 667789999999999999999987
Q ss_pred hCCCCCHHHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccc
Q 042809 65 FGGTLDAGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLW 138 (241)
Q Consensus 65 ~~~~~~~~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (241)
. ..++...+..++.| +||+++++||||+|+||+++.++.++++|||++......... .......++..|
T Consensus 102 ~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~----~~~~~~~~~~~y 176 (272)
T cd06629 102 Y-GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDN----DQNMSMQGSVFW 176 (272)
T ss_pred c-cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccccccc----cccccccCCccc
Confidence 5 56777776665554 479999999999999999999999999999998754321110 111233478889
Q ss_pred cCcccccccC--CCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCC----CChhhHHHHHHHHHHhhc
Q 042809 139 MAPEVLRNEG--LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPH----FPTQFFKKVLDFLAKCLE 212 (241)
Q Consensus 139 ~aPE~~~~~~--~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~ 212 (241)
+|||.+.... ++.++|+||||+++|++++|..||...... .............. ....++..+.+++.+||.
T Consensus 177 ~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 254 (272)
T cd06629 177 MAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI--AAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFT 254 (272)
T ss_pred cCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH--HHHHHhhccccCCcCCccccccCCHHHHHHHHHHhc
Confidence 9999987654 788999999999999999999999653221 11111111111222 223457899999999999
Q ss_pred cCCCCCCChHHHhcCCCC
Q 042809 213 RKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 213 ~~p~~Rps~~~~l~~p~~ 230 (241)
.+|.+|||++++++|||+
T Consensus 255 ~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 255 INPDNRPTARELLQHPFI 272 (272)
T ss_pred CChhhCCCHHHHhhCCCC
Confidence 999999999999999997
No 201
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-39 Score=233.00 Aligned_cols=223 Identities=27% Similarity=0.453 Sum_probs=174.2
Q ss_pred CCCCCcEEEEEeccc---hHHHHHHHHHHHHHhhcC-CCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHH
Q 042809 2 NKGTGALFVVKSAES---EAGVQALRNEAEIRQSLN-SPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAG 72 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~-h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 72 (241)
.+.+|.++|||..+. ....+++...+.++..-. +|+||+ ..+..+++.||.|. ..+..+++.-.+++++.
T Consensus 113 ~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs-~C~ekLlkrik~piPE~ 191 (391)
T KOG0983|consen 113 FRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS-TCAEKLLKRIKGPIPER 191 (391)
T ss_pred EcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH-HHHHHHHHHhcCCchHH
Confidence 367899999998774 344666777777766554 999998 56777889999994 68888888767788887
Q ss_pred HHHHHHHH------Hh-hcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 73 VIRLYTKE------IL-HGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 73 ~~~~~~~~------~L-h~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
.+-.+... || ..+|++|||+||+||++|..|.+|+||||++....+.. ......|.+.|+|||.+.
T Consensus 192 ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk-------AhtrsAGC~~YMaPERid 264 (391)
T KOG0983|consen 192 ILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK-------AHTRSAGCAAYMAPERID 264 (391)
T ss_pred hhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeeccc-------ccccccCCccccCccccC
Confidence 77665543 34 36889999999999999999999999999998766532 233345889999999995
Q ss_pred ---ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCC--hhhHHHHHHHHHHhhccCCCCCCC
Q 042809 146 ---NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP--TQFFKKVLDFLAKCLERKPEKRWS 220 (241)
Q Consensus 146 ---~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rps 220 (241)
..+|+.++||||||++++|+.||+.||.+...+-.. +.......++.++ ...++++++|+..||.+|+.+||.
T Consensus 265 p~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~--ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~ 342 (391)
T KOG0983|consen 265 PPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEV--LTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPK 342 (391)
T ss_pred CCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHH--HHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcc
Confidence 356889999999999999999999999875433221 1111224444444 347899999999999999999999
Q ss_pred hHHHhcCCCCCCCC
Q 042809 221 AEELLNHTFISGNA 234 (241)
Q Consensus 221 ~~~~l~~p~~~~~~ 234 (241)
..++|+|||++...
T Consensus 343 Y~~Ll~h~Fi~~ye 356 (391)
T KOG0983|consen 343 YNKLLEHPFIKRYE 356 (391)
T ss_pred hHHHhcCcceeecc
Confidence 99999999997654
No 202
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=9.6e-38 Score=242.68 Aligned_cols=222 Identities=27% Similarity=0.367 Sum_probs=166.6
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHh-CCCCCH
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF-GGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~ 71 (241)
++.+|+.||+|.+... .....+.+|++++++++||||++ ..++..++||||+. ++|.+++... ...+++
T Consensus 21 ~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~l~~ 99 (284)
T cd07860 21 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASPLSGIPL 99 (284)
T ss_pred ECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-cCHHHHHHhCCCCCCCH
Confidence 4678999999987632 22356889999999999999988 67788999999996 6899988764 345677
Q ss_pred HHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++. ++||+.|++|+||+|+||+++.++.++|+|||++....... .......+++.|+|||.+.
T Consensus 100 ~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~------~~~~~~~~~~~y~aPE~~~ 173 (284)
T cd07860 100 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV------RTYTHEVVTLWYRAPEILL 173 (284)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc------cccccccccccccCCeEEe
Confidence 66665555 44899999999999999999999999999999986543211 1112233578899999887
Q ss_pred ccC-CCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCC---------------------CC----CCChhh
Q 042809 146 NEG-LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNE---------------------KP----HFPTQF 199 (241)
Q Consensus 146 ~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------~~----~~~~~~ 199 (241)
+.. ++.++|+||||+++|+++||..||................... .. .....+
T Consensus 174 ~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (284)
T cd07860 174 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPL 253 (284)
T ss_pred cCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccC
Confidence 654 5788999999999999999999996643322111111100000 00 011234
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 200 ~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
+..+.++|.+||+.+|.+|||+++++.||||
T Consensus 254 ~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 254 DEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred CHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 5678999999999999999999999999998
No 203
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.3e-37 Score=244.28 Aligned_cols=219 Identities=20% Similarity=0.277 Sum_probs=161.9
Q ss_pred CCCcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC---------
Q 042809 4 GTGALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG--------- 66 (241)
Q Consensus 4 ~~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~--------- 66 (241)
.++..||+|.+.. ......+.+|+.++.+++||||++ ...+..++||||+.+++|.+++....
T Consensus 44 ~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 123 (304)
T cd05096 44 GRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGN 123 (304)
T ss_pred CcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccc
Confidence 3556899998774 334567899999999999999988 45677999999999999999987632
Q ss_pred ---------CCCCHHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCcccccccc
Q 042809 67 ---------GTLDAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQS 131 (241)
Q Consensus 67 ---------~~~~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 131 (241)
..++...+..++. .+||+.|++||||||+||+++.++.+||+|||++........ ......
T Consensus 124 ~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~----~~~~~~ 199 (304)
T cd05096 124 DAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDY----YRIQGR 199 (304)
T ss_pred cccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccCce----eEecCc
Confidence 1233444444444 448999999999999999999999999999999865422110 111122
Q ss_pred ccCcccccCcccccccCCCchhhHHHHHHHHHHHHh--CCCCCccchhchHHHHHHHHh----cCCCCCCChhhHHHHHH
Q 042809 132 IGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKIAC----SNEKPHFPTQFFKKVLD 205 (241)
Q Consensus 132 ~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~--g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 205 (241)
..++..|+|||.+.+..++.++|+||||+++|++++ +..||................ .......+...+..+.+
T Consensus 200 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (304)
T cd05096 200 AVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYE 279 (304)
T ss_pred CCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHH
Confidence 335678999999988889999999999999999987 567886543333222211111 11112234456778999
Q ss_pred HHHHhhccCCCCCCChHHHhc
Q 042809 206 FLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 206 li~~~l~~~p~~Rps~~~~l~ 226 (241)
++.+||+.+|.+|||+.++.+
T Consensus 280 li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 280 LMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred HHHHHccCCchhCcCHHHHHH
Confidence 999999999999999999953
No 204
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=7.2e-38 Score=243.65 Aligned_cols=227 Identities=36% Similarity=0.579 Sum_probs=178.9
Q ss_pred CCCCCcEEEEEeccchH-HHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHH
Q 042809 2 NKGTGALFVVKSAESEA-GVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIR 75 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 75 (241)
++.++..+++|.+.... ..+.+.+|++.++.++|+|+++ ......++|+||+++++|.+++......++...+.
T Consensus 40 ~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~ 119 (286)
T cd06614 40 DRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIA 119 (286)
T ss_pred EccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHH
Confidence 34578899999987433 3567889999999999999988 56688999999999999999999865467777777
Q ss_pred HHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCC
Q 042809 76 LYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGL 149 (241)
Q Consensus 76 ~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~ 149 (241)
.++.++ ||+.|++|+||+|+||+++.++.++|+|||.+........ ......++..|+|||.+.+..+
T Consensus 120 ~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~------~~~~~~~~~~y~~PE~~~~~~~ 193 (286)
T cd06614 120 YVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS------KRNSVVGTPYWMAPEVIKRKDY 193 (286)
T ss_pred HHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh------hhccccCCcccCCHhHhcCCCC
Confidence 666644 7999999999999999999999999999998865432111 1122346788999999988888
Q ss_pred CchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCC--ChhhHHHHHHHHHHhhccCCCCCCChHHHhcC
Q 042809 150 DFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHF--PTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227 (241)
Q Consensus 150 ~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 227 (241)
+.++|+||||+++|++++|..||............. ....+.. +..++..+.+++.+||+.+|.+|||+.+++.|
T Consensus 194 ~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 194 GPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLIT---TKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred CCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 999999999999999999999997643322222111 1111221 22367889999999999999999999999999
Q ss_pred CCCCCCCccC
Q 042809 228 TFISGNAKKN 237 (241)
Q Consensus 228 p~~~~~~~~~ 237 (241)
|||+....+.
T Consensus 271 ~~~~~~~~~~ 280 (286)
T cd06614 271 PFLKKACPKE 280 (286)
T ss_pred hHhhccCchH
Confidence 9999865543
No 205
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1e-37 Score=238.13 Aligned_cols=218 Identities=39% Similarity=0.634 Sum_probs=175.7
Q ss_pred CCCCCcEEEEEeccchH--HHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHH
Q 042809 2 NKGTGALFVVKSAESEA--GVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI 74 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 74 (241)
++.+|+.+++|.+.... ....+.+|+..+..++|+|++. ..+...++++||+++++|.+++......++...+
T Consensus 21 ~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~ 100 (253)
T cd05122 21 HKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQI 100 (253)
T ss_pred ECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHH
Confidence 34578999999987554 5678999999999999999987 5567899999999999999999875456777777
Q ss_pred HHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccC
Q 042809 75 RLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEG 148 (241)
Q Consensus 75 ~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~ 148 (241)
..++.++ ||+.|++||||+|+||+++.++.++|+|||.+........ .....++..|+|||.+.+..
T Consensus 101 ~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-------~~~~~~~~~~~~PE~~~~~~ 173 (253)
T cd05122 101 AYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-------RNTMVGTPYWMAPEVINGKP 173 (253)
T ss_pred HHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc-------ccceecCCcccCHHHHcCCC
Confidence 7666544 7999999999999999999999999999999876544211 22345788899999998888
Q ss_pred CCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChh--hHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 149 LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQ--FFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 149 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
.+.++|+||||+++|++++|..||...+.......... ...+..+.. ++..+.+++++||..+|.+|||+.+++.
T Consensus 174 ~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 174 YDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT---NGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred CCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh---cCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 89999999999999999999999976533222222221 222222222 3788999999999999999999999999
Q ss_pred CCC
Q 042809 227 HTF 229 (241)
Q Consensus 227 ~p~ 229 (241)
|||
T Consensus 251 ~~~ 253 (253)
T cd05122 251 HPF 253 (253)
T ss_pred CCC
Confidence 998
No 206
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=6.6e-38 Score=251.97 Aligned_cols=217 Identities=23% Similarity=0.310 Sum_probs=165.1
Q ss_pred CCCcEEEEEeccch---HHHHHHHHHHHHHhhc-CCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC--------
Q 042809 4 GTGALFVVKSAESE---AGVQALRNEAEIRQSL-NSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG-------- 66 (241)
Q Consensus 4 ~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l-~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~-------- 66 (241)
.++..||+|.+... .....+.+|+.+++.+ +|+||++ ...+..++||||+.+|+|.+++....
T Consensus 66 ~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~ 145 (374)
T cd05106 66 DNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVM 145 (374)
T ss_pred cccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccc
Confidence 45568999998742 3356688999999999 7999998 56678999999999999999986531
Q ss_pred -------------------------------------------------------------CCCCHHHHHHHHHH-----
Q 042809 67 -------------------------------------------------------------GTLDAGVIRLYTKE----- 80 (241)
Q Consensus 67 -------------------------------------------------------------~~~~~~~~~~~~~~----- 80 (241)
.+++...+..++.|
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL 225 (374)
T cd05106 146 ALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGM 225 (374)
T ss_pred cccccccccccccccchhcccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHH
Confidence 12455555555554
Q ss_pred -HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCchhhHHHHH
Q 042809 81 -ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLG 159 (241)
Q Consensus 81 -~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG 159 (241)
+||++|++||||||+||+++.++.++|+|||++........ ........++..|+|||.+.+..++.++||||||
T Consensus 226 ~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG 301 (374)
T cd05106 226 DFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN----YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 301 (374)
T ss_pred HHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc----eeeccCCCCccceeCHHHhcCCCCCccccHHHHH
Confidence 48999999999999999999999999999999865432111 0111122345679999999888899999999999
Q ss_pred HHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 160 CMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 160 ~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
+++|++++ |..||........ .............+...+.++.+++.+||+.+|.+|||+.++++
T Consensus 302 vil~ellt~G~~Pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 302 ILLWEIFSLGKSPYPGILVNSK--FYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred HHHHHHHhCCCCCCccccccHH--HHHHHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99999997 9999976433221 22222223334445556789999999999999999999999875
No 207
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-38 Score=253.60 Aligned_cols=220 Identities=32% Similarity=0.467 Sum_probs=181.0
Q ss_pred CCCCCCcEEEEEecc-----chHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 1 MNKGTGALFVVKSAE-----SEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
+|..|+.+||||... +..-...+..|++.|.+++|||++. ..+...|+|||||- |+-++++.-...++.
T Consensus 46 rd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYCl-GSAsDlleVhkKplq 124 (948)
T KOG0577|consen 46 RDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQ 124 (948)
T ss_pred eccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHh-ccHHHHHHHHhccch
Confidence 478899999999865 2344667999999999999999988 56678899999995 699999998888888
Q ss_pred HHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+..+..++. .|||+.+.+|||||..||+++..|.|||+|||.+....+ ...+.|||.|+|||++
T Consensus 125 EvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P----------AnsFvGTPywMAPEVI 194 (948)
T KOG0577|consen 125 EVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP----------ANSFVGTPYWMAPEVI 194 (948)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCc----------hhcccCCccccchhHh
Confidence 888877765 568999999999999999999999999999999976544 2356799999999998
Q ss_pred c---ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCC-ChhhHHHHHHHHHHhhccCCCCCCC
Q 042809 145 R---NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHF-PTQFFKKVLDFLAKCLERKPEKRWS 220 (241)
Q Consensus 145 ~---~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rps 220 (241)
. .+.|+-++||||||++..++...++|+.+.. .+. .+........|.+ ....+..+++|+..||++-|.+|||
T Consensus 195 LAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMN--AMS-ALYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRpt 271 (948)
T KOG0577|consen 195 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--AMS-ALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPT 271 (948)
T ss_pred eeccccccCCccceeeccchhhhhhhcCCCccCch--HHH-HHHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCc
Confidence 5 4668999999999999999999999976532 222 2222222333433 3567789999999999999999999
Q ss_pred hHHHhcCCCCCCCC
Q 042809 221 AEELLNHTFISGNA 234 (241)
Q Consensus 221 ~~~~l~~p~~~~~~ 234 (241)
.++++.|+|+....
T Consensus 272 se~ll~H~fv~R~R 285 (948)
T KOG0577|consen 272 SEELLKHRFVLRER 285 (948)
T ss_pred HHHHhhcchhccCC
Confidence 99999999986543
No 208
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=9.2e-38 Score=251.32 Aligned_cols=219 Identities=23% Similarity=0.323 Sum_probs=165.3
Q ss_pred CCCCcEEEEEeccch---HHHHHHHHHHHHHhhc-CCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCC------
Q 042809 3 KGTGALFVVKSAESE---AGVQALRNEAEIRQSL-NSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGG------ 67 (241)
Q Consensus 3 ~~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l-~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~------ 67 (241)
.+++..||+|.+... ...+.+.+|+.++..+ +||||++ ...+..++||||+++|+|.+++.....
T Consensus 62 ~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~ 141 (375)
T cd05104 62 SDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPK 141 (375)
T ss_pred CccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhccCCcHHHHHHhccccccccc
Confidence 456778999998632 3456788999999999 7999998 567789999999999999999975321
Q ss_pred --------------------------------------------------------------------CCCHHHHHHHHH
Q 042809 68 --------------------------------------------------------------------TLDAGVIRLYTK 79 (241)
Q Consensus 68 --------------------------------------------------------------------~~~~~~~~~~~~ 79 (241)
.++...+..++.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 221 (375)
T cd05104 142 HEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSY 221 (375)
T ss_pred ccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHH
Confidence 244444555544
Q ss_pred ------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCchh
Q 042809 80 ------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFAT 153 (241)
Q Consensus 80 ------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~ 153 (241)
++||+.|++||||||+||+++.++.++|+|||++........ ........++..|+|||.+.+..++.++
T Consensus 222 qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~s 297 (375)
T cd05104 222 QVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN----YVVKGNARLPVKWMAPESIFNCVYTFES 297 (375)
T ss_pred HHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCccc----ccccCCCCCCcceeChhHhcCCCCCCCC
Confidence 447999999999999999999999999999999875432111 0111122345679999999998999999
Q ss_pred hHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcC
Q 042809 154 DIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227 (241)
Q Consensus 154 Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 227 (241)
|+||||+++|++++ |..||........ .............+...+.++.+++.+||+.+|++|||+.++++.
T Consensus 298 Di~slG~~l~ellt~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 298 DVWSYGILLWEIFSLGSSPYPGMPVDSK--FYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCCCchHH--HHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 99999999999998 8999866432221 112222222333444567789999999999999999999999864
No 209
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.5e-37 Score=241.49 Aligned_cols=216 Identities=22% Similarity=0.353 Sum_probs=168.4
Q ss_pred CCcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC----------
Q 042809 5 TGALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG---------- 66 (241)
Q Consensus 5 ~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~---------- 66 (241)
++..|++|.+.. ......+.+|+..+.+++||||++ ......++++||+++++|.+++....
T Consensus 34 ~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~ 113 (283)
T cd05048 34 SATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESG 113 (283)
T ss_pred ceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccc
Confidence 447899998763 234566899999999999999988 56678999999999999999998642
Q ss_pred -----CCCCHHHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCc
Q 042809 67 -----GTLDAGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGT 135 (241)
Q Consensus 67 -----~~~~~~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~ 135 (241)
..++...+..++.| +||+.|++|+||+|+||+++.++.++|+|||++........ ........++
T Consensus 114 ~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~----~~~~~~~~~~ 189 (283)
T cd05048 114 DETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADY----YRVQSKSLLP 189 (283)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeecccccc----ccccCCCccc
Confidence 23555555555544 47999999999999999999999999999999864422111 1111223457
Q ss_pred ccccCcccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccC
Q 042809 136 QLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERK 214 (241)
Q Consensus 136 ~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 214 (241)
+.|+|||.+.+..++.++|+||||+++|++++ |..||.+......... ......+..+...+..+.+|+.+||+.+
T Consensus 190 ~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~---i~~~~~~~~~~~~~~~~~~l~~~c~~~~ 266 (283)
T cd05048 190 VRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEM---IRSRQLLPCPEDCPARVYALMIECWNEI 266 (283)
T ss_pred ccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH---HHcCCcCCCcccCCHHHHHHHHHHccCC
Confidence 78999999988889999999999999999998 9999976544333222 2233444556778899999999999999
Q ss_pred CCCCCChHHHhcC
Q 042809 215 PEKRWSAEELLNH 227 (241)
Q Consensus 215 p~~Rps~~~~l~~ 227 (241)
|.+|||+.+++++
T Consensus 267 p~~Rp~~~~i~~~ 279 (283)
T cd05048 267 PARRPRFKDIHTR 279 (283)
T ss_pred hhhCcCHHHHHHH
Confidence 9999999999864
No 210
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.7e-39 Score=257.41 Aligned_cols=223 Identities=27% Similarity=0.412 Sum_probs=186.5
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHH
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAG 72 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 72 (241)
+.-||..||||.+.+. .....+.+|+++|+.++|||||+ .....+|+||||+.+|.+++|+...+ +..+.
T Consensus 77 ~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~~g-r~~e~ 155 (596)
T KOG0586|consen 77 HILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVKHG-RMKEK 155 (596)
T ss_pred ecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCchhHHHHHhcc-cchhh
Confidence 5678999999998843 33455899999999999999998 67889999999999999999999854 44446
Q ss_pred HHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 73 VIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 73 ~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
.++.++. +|||++++||||||.+||+++.+..+||+|||++..+.. .......+|++.|.|||++.+
T Consensus 156 ~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~-------~~~lqt~cgsppyAaPEl~~g 228 (596)
T KOG0586|consen 156 EARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDY-------GLMLQTFCGSPPYAAPELFNG 228 (596)
T ss_pred hhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeecc-------cccccccCCCCCccChHhhcC
Confidence 5655554 568999999999999999999999999999999986643 233456789999999999999
Q ss_pred cCC-CchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHh
Q 042809 147 EGL-DFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225 (241)
Q Consensus 147 ~~~-~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l 225 (241)
..| .+.+|+|++|+++|.++.|.+||.+..-... +.........++..++.++.++|+++|.++|.+|+++++++
T Consensus 229 ~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~L----r~rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim 304 (596)
T KOG0586|consen 229 KKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKEL----RPRVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIM 304 (596)
T ss_pred cccCCcceehhhhhhhheeeeecccccCCcccccc----cchheeeeecccceeechhHHHHHHhhccCccccCCHHHhh
Confidence 877 5899999999999999999999987543332 23333556677888889999999999999999999999999
Q ss_pred cCCCCCCCCcc
Q 042809 226 NHTFISGNAKK 236 (241)
Q Consensus 226 ~~p~~~~~~~~ 236 (241)
.|.|......+
T Consensus 305 ~~~W~n~~~~~ 315 (596)
T KOG0586|consen 305 KDRWRNDLLEA 315 (596)
T ss_pred hhcccchhhhh
Confidence 99999765543
No 211
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.6e-37 Score=237.91 Aligned_cols=220 Identities=30% Similarity=0.509 Sum_probs=179.5
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHh---CCCC
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF---GGTL 69 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~ 69 (241)
+..++..+++|.+... .....+.+|++.++.++|+|+++ ......++|+||+++++|.+++... +..+
T Consensus 21 ~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 100 (258)
T cd08215 21 RKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPF 100 (258)
T ss_pred EcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCc
Confidence 3567899999997743 45677899999999999999988 4568999999999999999999875 3667
Q ss_pred CHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccc
Q 042809 70 DAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEV 143 (241)
Q Consensus 70 ~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~ 143 (241)
+...+..++.++ ||+.|++|+||+|+||+++.++.++|+|||.+....... .......+++.|+|||.
T Consensus 101 ~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~------~~~~~~~~~~~y~~pe~ 174 (258)
T cd08215 101 PEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV------DLAKTVVGTPYYLSPEL 174 (258)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc------ceecceeeeecccChhH
Confidence 777777666654 799999999999999999999999999999987554321 11123457888999999
Q ss_pred ccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHH
Q 042809 144 LRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEE 223 (241)
Q Consensus 144 ~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ 223 (241)
+.+..++.++|+||+|++++++++|..||...... ..............+...+..+.+++.+||..+|.+|||+.+
T Consensus 175 ~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ 251 (258)
T cd08215 175 CQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL---ELALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQ 251 (258)
T ss_pred hccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH---HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 98888899999999999999999999999664322 222333334455566677889999999999999999999999
Q ss_pred HhcCCCC
Q 042809 224 LLNHTFI 230 (241)
Q Consensus 224 ~l~~p~~ 230 (241)
++.||||
T Consensus 252 ll~~~~~ 258 (258)
T cd08215 252 ILQSPFI 258 (258)
T ss_pred HhcCCCC
Confidence 9999997
No 212
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.1e-37 Score=238.72 Aligned_cols=217 Identities=25% Similarity=0.457 Sum_probs=173.5
Q ss_pred CCCCCcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHh-CCCCCHH
Q 042809 2 NKGTGALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF-GGTLDAG 72 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~ 72 (241)
++.+++.+|+|.++. ....+.+.+|+.+++.++|+||++ ..++.+|+|+||+++++|.+++... +..++..
T Consensus 21 ~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~ 100 (255)
T cd08219 21 HVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPED 100 (255)
T ss_pred EcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHH
Confidence 467899999998752 344577889999999999999988 6778999999999999999998753 3456777
Q ss_pred HHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 73 VIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 73 ~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
.+..++.|+ ||++|++|+||+|+||+++.++.++++|||.+........ ......+++.|+|||.+.+
T Consensus 101 ~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~------~~~~~~~~~~~~aPE~~~~ 174 (255)
T cd08219 101 TILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA------YACTYVGTPYYVPPEIWEN 174 (255)
T ss_pred HHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccccc------ccccccCCccccCHHHHcc
Confidence 766666654 7999999999999999999999999999999865433111 1123457888999999998
Q ss_pred cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 147 EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 147 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
..++.++|+||||+++|++++|..||........ ............+..++..+.+++.+||+.+|.+|||+.+++.
T Consensus 175 ~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 251 (255)
T cd08219 175 MPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL---ILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILS 251 (255)
T ss_pred CCcCchhhhhhhchhheehhhccCCCCCCCHHHH---HHHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhh
Confidence 8899999999999999999999999976433222 2222233344456667788999999999999999999999986
Q ss_pred C
Q 042809 227 H 227 (241)
Q Consensus 227 ~ 227 (241)
.
T Consensus 252 ~ 252 (255)
T cd08219 252 R 252 (255)
T ss_pred c
Confidence 4
No 213
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=2.3e-37 Score=237.26 Aligned_cols=218 Identities=20% Similarity=0.301 Sum_probs=170.7
Q ss_pred CCCcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHH
Q 042809 4 GTGALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRL 76 (241)
Q Consensus 4 ~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 76 (241)
+++..||+|..... ...+.+.+|+.++++++||||++ ......++||||+++++|.+++......+++..+..
T Consensus 20 ~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 99 (257)
T cd05115 20 KKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPLNKFLSGKKDEITVSNVVE 99 (257)
T ss_pred CCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHH
Confidence 44567999987643 33466899999999999999988 345578999999999999999987666778887777
Q ss_pred HHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCC
Q 042809 77 YTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLD 150 (241)
Q Consensus 77 ~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~ 150 (241)
++.|+ ||++|++|+||+|+||+++.++.++|+|||++......... ........++..|+|||.+.+..++
T Consensus 100 ~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~ 176 (257)
T cd05115 100 LMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY---YKARSAGKWPLKWYAPECINFRKFS 176 (257)
T ss_pred HHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccc---eeccCCCCCCcccCCHHHHccCCCC
Confidence 76655 79999999999999999999999999999998744321110 0111111235679999999888889
Q ss_pred chhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcC
Q 042809 151 FATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227 (241)
Q Consensus 151 ~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 227 (241)
.++|+||||+++|++++ |..||........ ......+.....+...++++.+++.+||..+|++||++.++.+.
T Consensus 177 ~~~Di~slG~~l~el~~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~ 251 (257)
T cd05115 177 SRSDVWSYGITMWEAFSYGQKPYKKMKGPEV---MSFIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEER 251 (257)
T ss_pred chhhHHHHHHHHHHHhcCCCCCcCcCCHHHH---HHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999999996 9999976543332 23333444556667778899999999999999999999998753
No 214
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1e-37 Score=241.64 Aligned_cols=224 Identities=33% Similarity=0.577 Sum_probs=174.8
Q ss_pred CCCCCcEEEEEeccc---hHHHHHHHHHHHHHhhcC---CCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 2 NKGTGALFVVKSAES---EAGVQALRNEAEIRQSLN---SPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~---h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
++.+|+.||+|.+.. ....+.+.+|+.+++++. |||+++ ..+...++||||+++++|.+++.. ..++
T Consensus 22 ~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~l~ 99 (277)
T cd06917 22 HVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKA--GPIA 99 (277)
T ss_pred EcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHc--cCCC
Confidence 467899999998763 334567889999999997 999987 566789999999999999999875 3677
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+..+..++.++ ||+.|++|+||+|+||+++.++.++|+|||.+....... .......|+..|+|||.+
T Consensus 100 ~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~------~~~~~~~~~~~y~aPE~~ 173 (277)
T cd06917 100 EKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS------SKRSTFVGTPYWMAPEVI 173 (277)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc------cccccccCCcceeCHHHh
Confidence 77666665544 799999999999999999999999999999987554311 111233578889999998
Q ss_pred cc-cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCCh-hhHHHHHHHHHHhhccCCCCCCChH
Q 042809 145 RN-EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPT-QFFKKVLDFLAKCLERKPEKRWSAE 222 (241)
Q Consensus 145 ~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~p~~Rps~~ 222 (241)
.+ ..++.++|+||||+++|++++|..||.......... .......+..+. ..+.++.+++.+||+.+|.+|||+.
T Consensus 174 ~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~ 250 (277)
T cd06917 174 TEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMM---LIPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAE 250 (277)
T ss_pred ccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhh---ccccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHH
Confidence 65 446889999999999999999999997643322211 111122233333 2677899999999999999999999
Q ss_pred HHhcCCCCCCCCcc
Q 042809 223 ELLNHTFISGNAKK 236 (241)
Q Consensus 223 ~~l~~p~~~~~~~~ 236 (241)
+++.||||+.....
T Consensus 251 ~il~~~~~~~~~~~ 264 (277)
T cd06917 251 ELLKSKWIKAHSKT 264 (277)
T ss_pred HHhhChHhhccccC
Confidence 99999999876643
No 215
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=5.6e-38 Score=249.33 Aligned_cols=234 Identities=23% Similarity=0.345 Sum_probs=173.6
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc---------cCCceeeeeecccCCCCHHHHHHHhCCC
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR---------NGEKTVNIFMEYMAGGSLLDVAEKFGGT 68 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~---------~~~~~~~lv~e~~~~~~L~~~l~~~~~~ 68 (241)
++.+|+.||+|.+... .....+.+|+.++++++||||++ ......++|+||+. ++|.+++.. ...
T Consensus 26 ~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~ 103 (334)
T cd07855 26 DTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLME-SDLHHIIHS-DQP 103 (334)
T ss_pred EcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhh-hhHHHHhcc-CCC
Confidence 5678999999987643 33566788999999999999987 13467899999995 689998876 355
Q ss_pred CCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcc
Q 042809 69 LDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPE 142 (241)
Q Consensus 69 ~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE 142 (241)
++...+..++.|+ ||+.|++||||+|+||+++.++.++|+|||++.......... ........++..|+|||
T Consensus 104 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~~y~~PE 181 (334)
T cd07855 104 LTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEH--KYFMTEYVATRWYRAPE 181 (334)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcCC--CcccccccccccccChH
Confidence 7777777776644 799999999999999999999999999999986543211110 11112235788899999
Q ss_pred cccc-cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHh----------------------cCCCCCC----
Q 042809 143 VLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIAC----------------------SNEKPHF---- 195 (241)
Q Consensus 143 ~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~----------------------~~~~~~~---- 195 (241)
.+.+ ..++.++|+||||+++|++++|+.||.+.............. .......
T Consensus 182 ~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (334)
T cd07855 182 LLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSK 261 (334)
T ss_pred HhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHH
Confidence 9865 457889999999999999999999996543221111111000 0011111
Q ss_pred -ChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCccCCC
Q 042809 196 -PTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNST 239 (241)
Q Consensus 196 -~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~~~~~ 239 (241)
....+.++.++|++||+.+|.+|||+++++.||||.......+.
T Consensus 262 ~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~~~ 306 (334)
T cd07855 262 IFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPDDE 306 (334)
T ss_pred HcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCccc
Confidence 13356789999999999999999999999999999876665543
No 216
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=6.7e-38 Score=250.61 Aligned_cols=220 Identities=26% Similarity=0.323 Sum_probs=164.5
Q ss_pred CCCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCccccc-----------CCceeeeeecccCCCCHHHHHHHhC
Q 042809 2 NKGTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGRN-----------GEKTVNIFMEYMAGGSLLDVAEKFG 66 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~-----------~~~~~~lv~e~~~~~~L~~~l~~~~ 66 (241)
++.+|+.||+|.+.. ......+.+|+.++++++||||++. .....|+||||+. ++|.+.+...
T Consensus 37 ~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~- 114 (353)
T cd07850 37 DTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMD- 114 (353)
T ss_pred ECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEeccC-CCHHHHHhhc-
Confidence 567899999998753 3345678899999999999999871 2246799999996 5888888652
Q ss_pred CCCCHHHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccC
Q 042809 67 GTLDAGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMA 140 (241)
Q Consensus 67 ~~~~~~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 140 (241)
++...+..++.| +||+.|++||||+|+||+++.++.++|+|||++....... ......++..|+|
T Consensus 115 --l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-------~~~~~~~~~~y~a 185 (353)
T cd07850 115 --LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-------MMTPYVVTRYYRA 185 (353)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCC-------CCCCCcccccccC
Confidence 666666555554 4799999999999999999999999999999997543311 1122346888999
Q ss_pred cccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcC------------------CCC---------
Q 042809 141 PEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN------------------EKP--------- 193 (241)
Q Consensus 141 PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~------------------~~~--------- 193 (241)
||.+.+..++.++|+||||+++|+|++|..||...+.............. ..+
T Consensus 186 PE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (353)
T cd07850 186 PEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEE 265 (353)
T ss_pred HHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhh
Confidence 99999988999999999999999999999999654321111100000000 000
Q ss_pred ------------CCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCC
Q 042809 194 ------------HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISG 232 (241)
Q Consensus 194 ------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~ 232 (241)
..+...+..+.+++.+||+.+|.+|||+.+++.||||+.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~ 316 (353)
T cd07850 266 LFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINV 316 (353)
T ss_pred hCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence 001124567899999999999999999999999998863
No 217
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=2.3e-37 Score=236.64 Aligned_cols=219 Identities=36% Similarity=0.672 Sum_probs=178.4
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHH
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAG 72 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 72 (241)
++.+++.|++|.+... ...+.+.+|++++.+++|+|+++ ......++|+||+++++|.+++... ..+++.
T Consensus 21 ~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~ 99 (254)
T cd06627 21 NLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKF-GPFPES 99 (254)
T ss_pred EcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhc-cCCCHH
Confidence 4567899999997743 35677999999999999999987 5667899999999999999999874 567777
Q ss_pred HHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 73 VIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 73 ~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
.+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||.+......... .....++..|+|||...+
T Consensus 100 ~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~------~~~~~~~~~y~~pe~~~~ 173 (254)
T cd06627 100 LVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD------DASVVGTPYWMAPEVIEM 173 (254)
T ss_pred HHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc------ccccccchhhcCHhhhcC
Confidence 777666654 79999999999999999999999999999999765442111 123457888999999988
Q ss_pred cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 147 EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 147 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
...+.++|+|++|+++|++++|..||...... ... ........+..+...+..+.+++.+||..+|++|||+++++.
T Consensus 174 ~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 174 SGASTASDIWSLGCTVIELLTGNPPYYDLNPM--AAL-FRIVQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCCcchhHHHHHHHHHHHHhCCCCCCCccHH--HHH-HHHhccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 77889999999999999999999999764321 111 122234445566677889999999999999999999999999
Q ss_pred CCCC
Q 042809 227 HTFI 230 (241)
Q Consensus 227 ~p~~ 230 (241)
||||
T Consensus 251 ~~~~ 254 (254)
T cd06627 251 HPWI 254 (254)
T ss_pred CCCC
Confidence 9997
No 218
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1e-37 Score=242.90 Aligned_cols=223 Identities=26% Similarity=0.471 Sum_probs=169.7
Q ss_pred CCCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHH
Q 042809 2 NKGTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAG 72 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 72 (241)
++++++.||+|.+.. ....+.+.+|++++++++|+||++ ..++..++|+||++++.+..+... ...++..
T Consensus 22 ~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~-~~~~~~~ 100 (288)
T cd07833 22 NKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEAS-PGGLPPD 100 (288)
T ss_pred eCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCCHHHHHHhc-CCCCCHH
Confidence 567899999998763 233567899999999999999988 566789999999988666665554 4557777
Q ss_pred HHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 73 VIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 73 ~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
.+..++.++ ||+.|++|+||+|+||+++.++.++|+|||.+........ .......++..|+|||.+.+
T Consensus 101 ~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~-----~~~~~~~~~~~~~~PE~~~~ 175 (288)
T cd07833 101 AVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA-----SPLTDYVATRWYRAPELLVG 175 (288)
T ss_pred HHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc-----ccccCcccccCCcCCchhcC
Confidence 776666544 7999999999999999999999999999999876543211 11123456788999999988
Q ss_pred c-CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCC--------------------C--------CCCh
Q 042809 147 E-GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEK--------------------P--------HFPT 197 (241)
Q Consensus 147 ~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------~--------~~~~ 197 (241)
. .++.++|+||||+++|++++|..||.+.................. . .++.
T Consensus 176 ~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (288)
T cd07833 176 DTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPG 255 (288)
T ss_pred CCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCC
Confidence 7 788999999999999999999999975433222111111000000 0 1122
Q ss_pred hhHHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 198 QFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 198 ~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
.++..+.++|++||..+|++|||+++++.||||
T Consensus 256 ~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 256 KVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred ccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 347789999999999999999999999999997
No 219
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.8e-37 Score=240.40 Aligned_cols=223 Identities=26% Similarity=0.440 Sum_probs=171.4
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHH---HhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCC
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEI---RQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGT 68 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~---l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~ 68 (241)
++.+|+.||+|.+... .....+..|..+ +....||||+. ...+..++|+||+.|++|..++.. ...
T Consensus 15 ~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~-~~~ 93 (278)
T cd05606 15 KADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGV 93 (278)
T ss_pred EecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCCCCcHHHHHHh-cCC
Confidence 4578899999987642 111223444433 44457999987 566789999999999999998876 456
Q ss_pred CCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcc
Q 042809 69 LDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPE 142 (241)
Q Consensus 69 ~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE 142 (241)
+++..+..++.|+ ||+.+++|+||+|+||+++.++.++|+|||++...... ......|+..|+|||
T Consensus 94 l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~--------~~~~~~~~~~y~aPE 165 (278)
T cd05606 94 FSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--------KPHASVGTHGYMAPE 165 (278)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc--------CCcCcCCCcCCcCcH
Confidence 7888877777655 79999999999999999999999999999998644321 112335889999999
Q ss_pred ccccc-CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC--
Q 042809 143 VLRNE-GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW-- 219 (241)
Q Consensus 143 ~~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-- 219 (241)
.+.+. .++.++|+||+|+++|++++|..||............. .........+...+..+.+++.+||..+|.+||
T Consensus 166 ~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~ 244 (278)
T cd05606 166 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR-MTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGC 244 (278)
T ss_pred HhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHH-HhhccCCCCCCcCCHHHHHHHHHHhhcCHHhccCC
Confidence 99754 57889999999999999999999997653322222221 222334556666788999999999999999999
Q ss_pred ---ChHHHhcCCCCCCCC
Q 042809 220 ---SAEELLNHTFISGNA 234 (241)
Q Consensus 220 ---s~~~~l~~p~~~~~~ 234 (241)
++.++++||||+...
T Consensus 245 ~~~~~~~ll~~~~~~~~~ 262 (278)
T cd05606 245 LGRGAQEVKEHPFFRSLD 262 (278)
T ss_pred CCCCHHHHHhCccccCCC
Confidence 999999999998754
No 220
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=3.2e-37 Score=236.33 Aligned_cols=214 Identities=25% Similarity=0.393 Sum_probs=167.0
Q ss_pred CCcEEEEEeccch-HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHH
Q 042809 5 TGALFVVKSAESE-AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYT 78 (241)
Q Consensus 5 ~~~~vaiK~~~~~-~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 78 (241)
++..+|+|.+... .....+.+|+.++++++||||++ ......++||||+++|+|.+++......++...+..++
T Consensus 27 ~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ 106 (256)
T cd05114 27 AQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMC 106 (256)
T ss_pred cCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHH
Confidence 4567999987643 33467889999999999999988 56678999999999999999998655567777666665
Q ss_pred HH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCch
Q 042809 79 KE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFA 152 (241)
Q Consensus 79 ~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~ 152 (241)
.+ +||+.|++|+||+|+||+++.++.++|+|||.+........ .......++..|+|||.+.+..++.+
T Consensus 107 ~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~ 181 (256)
T cd05114 107 QDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY-----TSSSGAKFPVKWSPPEVFNFSKYSSK 181 (256)
T ss_pred HHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCce-----eccCCCCCchhhCChhhcccCccchh
Confidence 54 48999999999999999999999999999998875432111 01112224567999999988889999
Q ss_pred hhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 153 TDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 153 ~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
+|+||||+++|++++ |+.||............ ........+...+..+.+++.+||+.+|.+|||++++++
T Consensus 182 ~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i---~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 182 SDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMI---SRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred hhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH---HCCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 999999999999999 99999765433332222 222233344556778999999999999999999999986
No 221
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-38 Score=233.11 Aligned_cols=234 Identities=26% Similarity=0.356 Sum_probs=183.2
Q ss_pred CCCCCcEEEEEeccch--HHHHHHHHHHHHHhhcC-CCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 2 NKGTGALFVVKSAESE--AGVQALRNEAEIRQSLN-SPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~-h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
+..||+.||||++.+. ..+.+..+|++++...+ |+||+. +++..+|+|||.|.||+|-+.|..+ ..+++..
T Consensus 99 ~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~~-~~F~E~E 177 (463)
T KOG0607|consen 99 SIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKR-KHFNERE 177 (463)
T ss_pred eeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHHHHHHHh-hhccHHH
Confidence 5678999999999864 45788999999999998 999988 8889999999999999999999984 5567766
Q ss_pred HHHHHH------HHhhcCCccccCCCCCcEEeecCCC---eeecCCCcchhhccccc-CCccccccccccCcccccCccc
Q 042809 74 IRLYTK------EILHGNGILHCDLKCNNVLLGSHGD---VKLPDLGCARRVNDLKN-NGNLKQSWQSIGGTQLWMAPEV 143 (241)
Q Consensus 74 ~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~---~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~aPE~ 143 (241)
+..++. .+||.+||.||||||+||+-...+. +||+||++......... ...........+|+..|||||+
T Consensus 178 As~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEV 257 (463)
T KOG0607|consen 178 ASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEV 257 (463)
T ss_pred HHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhH
Confidence 665555 4589999999999999999966544 89999999865432111 1222344567789999999998
Q ss_pred cc-----ccCCCchhhHHHHHHHHHHHHhCCCCCccchhc-----------hHHHHHHHHhcCCCCCCCh----hhHHHH
Q 042809 144 LR-----NEGLDFATDIWSLGCMVIEMATGRPPWGDKISN-----------AAATLLKIACSNEKPHFPT----QFFKKV 203 (241)
Q Consensus 144 ~~-----~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----------~~~~~~~~~~~~~~~~~~~----~~~~~~ 203 (241)
.. ...|+.++|.||||+++|-|+.|.+||.+.-.. ...+.+........+++|. .++.+.
T Consensus 258 Vd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~ea 337 (463)
T KOG0607|consen 258 VDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEA 337 (463)
T ss_pred HhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHH
Confidence 74 355789999999999999999999999653211 1122222223344555553 467889
Q ss_pred HHHHHHhhccCCCCCCChHHHhcCCCCCCCCcc
Q 042809 204 LDFLAKCLERKPEKRWSAEELLNHTFISGNAKK 236 (241)
Q Consensus 204 ~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~~ 236 (241)
.++++.++..++.+|.++.++++|||++.-+.+
T Consensus 338 kdlisnLlvrda~~rlsa~~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 338 KDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPE 370 (463)
T ss_pred HHHHHHHHhccHHhhhhhhhccCCccccccchh
Confidence 999999999999999999999999999876654
No 222
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2.5e-37 Score=238.24 Aligned_cols=220 Identities=25% Similarity=0.406 Sum_probs=167.9
Q ss_pred CCCCCcEEEEEeccc-----hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHh---CCC
Q 042809 2 NKGTGALFVVKSAES-----EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF---GGT 68 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~---~~~ 68 (241)
++.+|+.||+|.+.. ......+.+|+++++.++||||++ ...+..++|+||+++++|.+++... ...
T Consensus 23 ~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~ 102 (267)
T cd08228 23 CLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRL 102 (267)
T ss_pred EeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCC
Confidence 456889999997542 334566889999999999999988 4567899999999999999988642 334
Q ss_pred CCHHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcc
Q 042809 69 LDAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPE 142 (241)
Q Consensus 69 ~~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE 142 (241)
+++..+..++. .+||++|++|+||+|+||+++.++.++|+|||.+........ ......+++.|+|||
T Consensus 103 ~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~------~~~~~~~~~~~~aPE 176 (267)
T cd08228 103 IPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT------AAHSLVGTPYYMSPE 176 (267)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhH------HHhcCCCCccccChh
Confidence 66666555554 448999999999999999999999999999998875433111 112235788899999
Q ss_pred cccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChH
Q 042809 143 VLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAE 222 (241)
Q Consensus 143 ~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 222 (241)
.+.+..++.++|+||+|+++|++++|..||...................++..+...+..+.+++.+||..+|.+|||++
T Consensus 177 ~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ 256 (267)
T cd08228 177 RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIG 256 (267)
T ss_pred hhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHH
Confidence 99888889999999999999999999999965433222222221222222222345678899999999999999999999
Q ss_pred HHhcC
Q 042809 223 ELLNH 227 (241)
Q Consensus 223 ~~l~~ 227 (241)
++++.
T Consensus 257 ~vl~~ 261 (267)
T cd08228 257 YVHQI 261 (267)
T ss_pred HHHHH
Confidence 99864
No 223
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.2e-37 Score=267.72 Aligned_cols=222 Identities=24% Similarity=0.342 Sum_probs=169.6
Q ss_pred CCCCCcEEEEEecc----chHHHHHHHHHHHHHhhcCCCcccc-------cCCceeeeeecccCCCCHHHHHHHh---CC
Q 042809 2 NKGTGALFVVKSAE----SEAGVQALRNEAEIRQSLNSPNIGR-------NGEKTVNIFMEYMAGGSLLDVAEKF---GG 67 (241)
Q Consensus 2 ~~~~~~~vaiK~~~----~~~~~~~~~~e~~~l~~l~h~~i~~-------~~~~~~~lv~e~~~~~~L~~~l~~~---~~ 67 (241)
++.++..+|+|.+. .......+..|+.++.+++||||++ .....+|+||||+.+++|.+++... ..
T Consensus 34 dk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g 113 (1021)
T PTZ00266 34 HKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFG 113 (1021)
T ss_pred ECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccC
Confidence 56788899999876 2344677899999999999999988 2346799999999999999999763 34
Q ss_pred CCCHHHHHHHHHHH------hhcC-------CccccCCCCCcEEeecC-----------------CCeeecCCCcchhhc
Q 042809 68 TLDAGVIRLYTKEI------LHGN-------GILHCDLKCNNVLLGSH-----------------GDVKLPDLGCARRVN 117 (241)
Q Consensus 68 ~~~~~~~~~~~~~~------Lh~~-------~~vH~dl~p~Nil~~~~-----------------~~~kl~dfg~~~~~~ 117 (241)
.+++..++.++.|+ ||+. +|+|+||||+|||++.+ +.+||+|||++....
T Consensus 114 ~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~ 193 (1021)
T PTZ00266 114 KIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIG 193 (1021)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccc
Confidence 67887777766654 7984 59999999999999642 348999999997543
Q ss_pred ccccCCccccccccccCcccccCcccccc--cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCC
Q 042809 118 DLKNNGNLKQSWQSIGGTQLWMAPEVLRN--EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHF 195 (241)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 195 (241)
.. .......|++.|+|||.+.+ ..++.++|||||||++|+|++|..||..... ........... +...
T Consensus 194 ~~-------s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~--~~qli~~lk~~-p~lp 263 (1021)
T PTZ00266 194 IE-------SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN--FSQLISELKRG-PDLP 263 (1021)
T ss_pred cc-------ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc--HHHHHHHHhcC-CCCC
Confidence 21 11123458999999999864 4478899999999999999999999975432 11222221111 1111
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCC
Q 042809 196 PTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233 (241)
Q Consensus 196 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~ 233 (241)
....+.++.+||.+||..+|.+|||+.++|.|||++..
T Consensus 264 i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 264 IKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence 23457789999999999999999999999999999744
No 224
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=4e-37 Score=239.67 Aligned_cols=217 Identities=24% Similarity=0.390 Sum_probs=168.2
Q ss_pred CCCCcEEEEEeccc--hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC---------
Q 042809 3 KGTGALFVVKSAES--EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG--------- 66 (241)
Q Consensus 3 ~~~~~~vaiK~~~~--~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~--------- 66 (241)
..++..+|+|.+.. ....+.+.+|+.++++++||||++ ...+..++|+||+++++|.+++...+
T Consensus 32 ~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~ 111 (288)
T cd05093 32 EQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEG 111 (288)
T ss_pred CCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCcccccccc
Confidence 34567799998774 344567999999999999999988 56778999999999999999998643
Q ss_pred ---CCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCccc
Q 042809 67 ---GTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL 137 (241)
Q Consensus 67 ---~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (241)
..+++..+..++.|+ ||++|++||||+|+||+++.++.++|+|||++....... .........++..
T Consensus 112 ~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~~~~ 187 (288)
T cd05093 112 NRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTD----YYRVGGHTMLPIR 187 (288)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccCCccccccCCc----eeecCCCCCcccc
Confidence 236777766666544 799999999999999999999999999999987442211 0111122334678
Q ss_pred ccCcccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCC
Q 042809 138 WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPE 216 (241)
Q Consensus 138 ~~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 216 (241)
|+|||.+.+..++.++|+||||+++|++++ |..||.......... ....+.....+...+..+.+++.+||+.+|.
T Consensus 188 y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~---~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~ 264 (288)
T cd05093 188 WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIE---CITQGRVLQRPRTCPKEVYDLMLGCWQREPH 264 (288)
T ss_pred ccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH---HHHcCCcCCCCCCCCHHHHHHHHHHccCChh
Confidence 999999998889999999999999999998 999986643332222 2222333344455678899999999999999
Q ss_pred CCCChHHHhc
Q 042809 217 KRWSAEELLN 226 (241)
Q Consensus 217 ~Rps~~~~l~ 226 (241)
+|||+.+++.
T Consensus 265 ~Rpt~~~v~~ 274 (288)
T cd05093 265 MRLNIKEIHS 274 (288)
T ss_pred hCCCHHHHHH
Confidence 9999999854
No 225
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2.4e-37 Score=243.22 Aligned_cols=226 Identities=27% Similarity=0.361 Sum_probs=166.3
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCccccc-------------CCceeeeeecccCCCCHHHHHHH
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGRN-------------GEKTVNIFMEYMAGGSLLDVAEK 64 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~-------------~~~~~~lv~e~~~~~~L~~~l~~ 64 (241)
++.+|+.||+|.+... .....+.+|+.++++++||||++. .....++|+||+. ++|.+++..
T Consensus 33 ~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~ 111 (310)
T cd07865 33 HKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCE-HDLAGLLSN 111 (310)
T ss_pred ECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEEEcCCC-cCHHHHHHh
Confidence 4678999999987632 223346789999999999999871 1246799999996 589888877
Q ss_pred hCCCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccc
Q 042809 65 FGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLW 138 (241)
Q Consensus 65 ~~~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (241)
....++...+..++.|+ ||++|++|+||+|+||+++.++.++|+|||++.......... ........++..|
T Consensus 112 ~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~~y 189 (310)
T cd07865 112 KNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSK--PNRYTNRVVTLWY 189 (310)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccC--CCCccCcccCccc
Confidence 55567888777776655 799999999999999999999999999999987543311111 1111233467889
Q ss_pred cCcccccccC-CCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCC---------------CC------
Q 042809 139 MAPEVLRNEG-LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPH---------------FP------ 196 (241)
Q Consensus 139 ~aPE~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------~~------ 196 (241)
+|||.+.+.. ++.++|+||||+++|++++|..||....................+. .+
T Consensus 190 ~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (310)
T cd07865 190 RPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRK 269 (310)
T ss_pred cCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchh
Confidence 9999987643 6789999999999999999999997654333222222211111100 00
Q ss_pred -------hhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 197 -------TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 197 -------~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
...+..+.++|.+||..+|.+|||++++++||||
T Consensus 270 ~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 270 VKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred hHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 0123567899999999999999999999999998
No 226
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=9.5e-38 Score=243.69 Aligned_cols=222 Identities=36% Similarity=0.573 Sum_probs=172.8
Q ss_pred CCCCCcEEEEEeccc--hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHH
Q 042809 2 NKGTGALFVVKSAES--EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI 74 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~--~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 74 (241)
+..+++.|++|.+.. ....+.+.+|+.+++.++||||++ ......|+|+||+++++|.+++.. ..++...+
T Consensus 40 ~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~ 117 (293)
T cd06647 40 DVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQI 117 (293)
T ss_pred EcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhh--cCCCHHHH
Confidence 456789999999763 234567889999999999999988 456789999999999999999986 34556665
Q ss_pred HHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccC
Q 042809 75 RLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEG 148 (241)
Q Consensus 75 ~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~ 148 (241)
..++.+ +||++|++|+||+|+||+++.++.++|+|||++....... .......+++.|+|||.+.+..
T Consensus 118 ~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~ 191 (293)
T cd06647 118 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ------SKRSTMVGTPYWMAPEVVTRKA 191 (293)
T ss_pred HHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccc------cccccccCChhhcCchhhccCC
Confidence 555544 4799999999999999999999999999999886443211 1112335788899999998888
Q ss_pred CCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCC--CChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 149 LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPH--FPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 149 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
++.++|+||||+++|++++|..||........... ......+. .+..++..+.+++.+||..+|.+||++.+++.
T Consensus 192 ~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 268 (293)
T cd06647 192 YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL---IATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 268 (293)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee---hhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 89999999999999999999999976433221111 11111121 23345678999999999999999999999999
Q ss_pred CCCCCCCC
Q 042809 227 HTFISGNA 234 (241)
Q Consensus 227 ~p~~~~~~ 234 (241)
||||+...
T Consensus 269 h~~~~~~~ 276 (293)
T cd06647 269 HPFLKIAK 276 (293)
T ss_pred CHHHhcCc
Confidence 99998765
No 227
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=3.2e-37 Score=239.14 Aligned_cols=224 Identities=30% Similarity=0.556 Sum_probs=179.3
Q ss_pred CCCCCcEEEEEeccc-----hHHHHHHHHHHHHHhhcC-CCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 2 NKGTGALFVVKSAES-----EAGVQALRNEAEIRQSLN-SPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~-----~~~~~~~~~e~~~l~~l~-h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
++.+|+.||+|++.. ......+.+|+.++.++. ||||++ ..++..++||||+.+++|.+++... ..++
T Consensus 22 ~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~ 100 (280)
T cd05581 22 EKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKY-GSLD 100 (280)
T ss_pred EcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHHc-CCCC
Confidence 456899999999764 233466889999999999 999988 6778899999999999999999874 4678
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCC--------------ccccccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNG--------------NLKQSWQ 130 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~--------------~~~~~~~ 130 (241)
...+..++.|+ ||+.|++|+||+|+||+++.++.++++|||++.......... .......
T Consensus 101 ~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (280)
T cd05581 101 EKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFA 180 (280)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccc
Confidence 87777776655 799999999999999999999999999999987654322110 0012223
Q ss_pred cccCcccccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHh
Q 042809 131 SIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKC 210 (241)
Q Consensus 131 ~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 210 (241)
...++..|+|||...+..++.++|+||||++++++++|+.||............. ......+...++.+.+++++|
T Consensus 181 ~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~ 256 (280)
T cd05581 181 SFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKIL----KLEYSFPPNFPPDAKDLIEKL 256 (280)
T ss_pred cccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH----hcCCCCCCccCHHHHHHHHHH
Confidence 4457788999999988888999999999999999999999998654322221111 333455666788999999999
Q ss_pred hccCCCCCCCh----HHHhcCCCC
Q 042809 211 LERKPEKRWSA----EELLNHTFI 230 (241)
Q Consensus 211 l~~~p~~Rps~----~~~l~~p~~ 230 (241)
|+.+|.+|||+ ++++.||||
T Consensus 257 l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 257 LVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred hcCCHhhCCCcccCHHHHhcCCCC
Confidence 99999999999 999999997
No 228
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.9e-37 Score=241.22 Aligned_cols=222 Identities=28% Similarity=0.425 Sum_probs=167.4
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHH
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAG 72 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 72 (241)
++.+|+.||+|.+... ...+.+.+|++++..++||||++ ..+...++|+||+++++|..+... ...++..
T Consensus 22 ~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~ 100 (286)
T cd07846 22 HKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKY-PNGLDES 100 (286)
T ss_pred ECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCccHHHHHHhc-cCCCCHH
Confidence 4567899999986532 23456889999999999999988 677889999999999888887665 3457777
Q ss_pred HHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 73 VIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 73 ~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
.+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+
T Consensus 101 ~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~ 174 (286)
T cd07846 101 RVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG------EVYTDYVATRWYRAPELLVG 174 (286)
T ss_pred HHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc------cccCcccceeeccCcHHhcc
Confidence 777666544 799999999999999999999999999999987543311 11122346788999999875
Q ss_pred -cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcC------------------CCC---------CCChh
Q 042809 147 -EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN------------------EKP---------HFPTQ 198 (241)
Q Consensus 147 -~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~------------------~~~---------~~~~~ 198 (241)
..++.++|+||||+++|++++|..||.................. ..+ ...+.
T Consensus 175 ~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (286)
T cd07846 175 DTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPK 254 (286)
T ss_pred ccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCC
Confidence 34678899999999999999999998654321111110100000 000 01124
Q ss_pred hHHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 199 FFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 199 ~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
.+..+.+++++||..+|.+|||++++++||||
T Consensus 255 ~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 255 LSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred cCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 56789999999999999999999999999998
No 229
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.8e-37 Score=241.35 Aligned_cols=221 Identities=33% Similarity=0.545 Sum_probs=166.3
Q ss_pred CCCCCcEEEEEeccchH-HHHHHHHHHHHHhhc-CCCcccc----------cCCceeeeeecccCCCCHHHHHHHh---C
Q 042809 2 NKGTGALFVVKSAESEA-GVQALRNEAEIRQSL-NSPNIGR----------NGEKTVNIFMEYMAGGSLLDVAEKF---G 66 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l-~h~~i~~----------~~~~~~~lv~e~~~~~~L~~~l~~~---~ 66 (241)
++.+++.+|+|.+.... ....+.+|+.++..+ +||||++ ..+...++||||+++++|.+++... +
T Consensus 39 ~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~ 118 (286)
T cd06638 39 NKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRG 118 (286)
T ss_pred ECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccC
Confidence 46788999999876432 245688899999999 6999988 1345799999999999999987642 3
Q ss_pred CCCCHHHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccC
Q 042809 67 GTLDAGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMA 140 (241)
Q Consensus 67 ~~~~~~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 140 (241)
..+++..+..++.| +||+.+++||||+|+||+++.++.++|+|||.+....... .......|++.|+|
T Consensus 119 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~------~~~~~~~~~~~y~a 192 (286)
T cd06638 119 ERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR------LRRNTSVGTPFWMA 192 (286)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCceeecccCC------CccccccCCCcccC
Confidence 45666665555544 4799999999999999999999999999999986543211 11123357889999
Q ss_pred cccccc-----cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcC-CCCCCChhhHHHHHHHHHHhhccC
Q 042809 141 PEVLRN-----EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN-EKPHFPTQFFKKVLDFLAKCLERK 214 (241)
Q Consensus 141 PE~~~~-----~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~ 214 (241)
||.+.. ..++.++|+||+|+++|++++|+.||........ ........ .....+...+..+.+++.+||+.+
T Consensus 193 PE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 270 (286)
T cd06638 193 PEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA--LFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKD 270 (286)
T ss_pred hhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH--HhhccccCCCcccCCCCcCHHHHHHHHHHccCC
Confidence 998753 4468899999999999999999999976432111 11111111 111123345678999999999999
Q ss_pred CCCCCChHHHhcCCCC
Q 042809 215 PEKRWSAEELLNHTFI 230 (241)
Q Consensus 215 p~~Rps~~~~l~~p~~ 230 (241)
|.+|||+.++++|+||
T Consensus 271 p~~Rps~~ell~~~~~ 286 (286)
T cd06638 271 YEKRPTVSDLLQHVFI 286 (286)
T ss_pred cccCCCHHHHhhcccC
Confidence 9999999999999997
No 230
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2.3e-37 Score=241.60 Aligned_cols=222 Identities=28% Similarity=0.422 Sum_probs=168.3
Q ss_pred CCCCCcEEEEEeccchH----HHHHHHHHHHHHhhcCCCcccc-----cCC--ceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 2 NKGTGALFVVKSAESEA----GVQALRNEAEIRQSLNSPNIGR-----NGE--KTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~-----~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
++.+++.+++|.++... ....+.+|+.++.+++||||++ ... ...|+|+||+. ++|.+++......++
T Consensus 26 ~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~l~ 104 (293)
T cd07843 26 DKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVE-HDLKSLMETMKQPFL 104 (293)
T ss_pred ECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcC-cCHHHHHHhccCCCC
Confidence 45678999999887322 2335678999999999999987 233 88999999997 599999987655678
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
...+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||++....... .......+++.|+|||.+
T Consensus 105 ~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~------~~~~~~~~~~~~~aPE~~ 178 (293)
T cd07843 105 QSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL------KPYTQLVVTLWYRAPELL 178 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc------cccccccccccccCchhh
Confidence 87777666544 799999999999999999999999999999887554321 111223467889999998
Q ss_pred cccC-CCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcC---------------------------CCCCCC
Q 042809 145 RNEG-LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN---------------------------EKPHFP 196 (241)
Q Consensus 145 ~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~ 196 (241)
.+.. ++.++|+||+|+++|++++|..||.................. ....++
T Consensus 179 ~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (293)
T cd07843 179 LGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFP 258 (293)
T ss_pred cCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhcccc
Confidence 7644 588999999999999999999999765432222111111000 001122
Q ss_pred hh-hHHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 197 TQ-FFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 197 ~~-~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
.. ++..+.++|++||+.+|++|||+++++.||||
T Consensus 259 ~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 259 ALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred ccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 22 46788999999999999999999999999998
No 231
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=3.7e-37 Score=235.04 Aligned_cols=218 Identities=32% Similarity=0.540 Sum_probs=176.4
Q ss_pred CCCCCcEEEEEeccchH-----HHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESEA-----GVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+++.+|+|.+.... ....+..|+.++++++|+|+++ ..+...++||||+++++|.+++... ..+++
T Consensus 14 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-~~l~~ 92 (250)
T cd05123 14 KKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKE-GRFSE 92 (250)
T ss_pred ECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHhc-CCCCH
Confidence 35678999999977432 4557899999999999999987 6788899999999999999999874 45677
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
.....++.|+ ||+.+++|+||+|+||+++.++.++|+|||.+....... .......++..|+|||...
T Consensus 93 ~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~------~~~~~~~~~~~~~~Pe~~~ 166 (250)
T cd05123 93 ERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG------SRTNTFCGTPEYLAPEVLL 166 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC------CcccCCcCCccccChHHhC
Confidence 7766665544 799999999999999999999999999999987543311 1122345788899999998
Q ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCCh---H
Q 042809 146 NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSA---E 222 (241)
Q Consensus 146 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~---~ 222 (241)
+...+.++|+||||+++|++++|..||........ ..... ......+...+..+.+++++||..+|.+|||+ +
T Consensus 167 ~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~---~~~~~-~~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~ 242 (250)
T cd05123 167 GKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEI---YEKIL-KDPLRFPEFLSPEARDLISGLLQKDPTKRLGSGGAE 242 (250)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH---HHHHh-cCCCCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHH
Confidence 88889999999999999999999999976543222 11111 24455666678899999999999999999999 9
Q ss_pred HHhcCCCC
Q 042809 223 ELLNHTFI 230 (241)
Q Consensus 223 ~~l~~p~~ 230 (241)
+++.||||
T Consensus 243 ~l~~~~~f 250 (250)
T cd05123 243 EIKAHPFF 250 (250)
T ss_pred HHHhCCCC
Confidence 99999998
No 232
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=1.2e-37 Score=236.09 Aligned_cols=209 Identities=25% Similarity=0.361 Sum_probs=164.7
Q ss_pred CCCCCCcEEEEEeccchHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHH
Q 042809 1 MNKGTGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIR 75 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 75 (241)
+|+.+|+.||+|.+..... ..+|...+....||||++ ......++||||+++++|.+++... ..+++..+.
T Consensus 13 ~~~~~~~~~~~K~i~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~ 88 (237)
T cd05576 13 MDTRTQQTFILKGLRKSSE---YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKF-LNIPEECVK 88 (237)
T ss_pred EEccCCcEEEEEeecchhh---hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHh-cCCCHHHHH
Confidence 3678999999999886542 334555555667999988 5667899999999999999999874 457777777
Q ss_pred HHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCC
Q 042809 76 LYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGL 149 (241)
Q Consensus 76 ~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~ 149 (241)
.++.|+ ||++|++|+||+|+||+++.++.++++|||.+...... .....++..|+|||.+.+..+
T Consensus 89 ~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~ 159 (237)
T cd05576 89 RWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS---------CDGEAVENMYCAPEVGGISEE 159 (237)
T ss_pred HHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc---------cccCCcCccccCCcccCCCCC
Confidence 666654 79999999999999999999999999999987544331 112234667999999988888
Q ss_pred CchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCCh-----HHH
Q 042809 150 DFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSA-----EEL 224 (241)
Q Consensus 150 ~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~~ 224 (241)
+.++|+||+|+++|++++|..|+....... ........+...+..+.+++.+||+.+|.+|||+ +++
T Consensus 160 ~~~~DvwslG~il~el~~g~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~ 231 (237)
T cd05576 160 TEACDWWSLGAILFELLTGKTLVECHPSGI--------NTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDI 231 (237)
T ss_pred CchhhHHHHHHHHHHHHHCcchhhcCchhc--------ccccccCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHH
Confidence 999999999999999999998875432110 0111223456677889999999999999999985 999
Q ss_pred hcCCCC
Q 042809 225 LNHTFI 230 (241)
Q Consensus 225 l~~p~~ 230 (241)
+.||||
T Consensus 232 ~~h~~~ 237 (237)
T cd05576 232 KSHPFF 237 (237)
T ss_pred HcCCCC
Confidence 999997
No 233
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.1e-36 Score=233.25 Aligned_cols=218 Identities=28% Similarity=0.407 Sum_probs=176.2
Q ss_pred CCCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHh---CCCC
Q 042809 2 NKGTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF---GGTL 69 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~ 69 (241)
++.+|+.+|+|.+.. ......+.+|+++++.++|+||++ ......++|+||+++++|.+++... ...+
T Consensus 21 ~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~ 100 (256)
T cd08530 21 RLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLI 100 (256)
T ss_pred ECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCC
Confidence 467889999998763 233556789999999999999987 5668899999999999999998763 2456
Q ss_pred CHHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccc
Q 042809 70 DAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEV 143 (241)
Q Consensus 70 ~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~ 143 (241)
+...+..++. .+||+.|++|+||+|+||+++.++.++|+|||++...... ......++..|+|||.
T Consensus 101 ~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~--------~~~~~~~~~~~~~Pe~ 172 (256)
T cd08530 101 PEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN--------MAKTQIGTPHYMAPEV 172 (256)
T ss_pred CHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC--------CcccccCCccccCHHH
Confidence 6666555544 4489999999999999999999999999999999765442 1122346888999999
Q ss_pred ccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHH
Q 042809 144 LRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEE 223 (241)
Q Consensus 144 ~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ 223 (241)
+.+..++.++|+||+|+++|++++|+.||...+.... .........+..+...+.++.+++.+||+.+|.+|||+.+
T Consensus 173 ~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 249 (256)
T cd08530 173 WKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDL---RYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDK 249 (256)
T ss_pred HCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHH
Confidence 9998899999999999999999999999977544322 2222334444555678889999999999999999999999
Q ss_pred HhcCCCC
Q 042809 224 LLNHTFI 230 (241)
Q Consensus 224 ~l~~p~~ 230 (241)
+++||++
T Consensus 250 ~l~~p~~ 256 (256)
T cd08530 250 ILASPAV 256 (256)
T ss_pred HhcCCCC
Confidence 9999985
No 234
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.2e-37 Score=246.13 Aligned_cols=228 Identities=29% Similarity=0.390 Sum_probs=168.9
Q ss_pred CCCCCcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc----------cCCceeeeeecccCCCCHHHHHHHhCCC
Q 042809 2 NKGTGALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR----------NGEKTVNIFMEYMAGGSLLDVAEKFGGT 68 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~----------~~~~~~~lv~e~~~~~~L~~~l~~~~~~ 68 (241)
++.+|+.||+|.+.. ......+.+|+.++++++|+||++ ......++|+||+. ++|.+++.. ..
T Consensus 26 ~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~ 102 (336)
T cd07849 26 HKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELME-TDLYKLIKT--QH 102 (336)
T ss_pred EcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhcc-cCHHHHHhc--CC
Confidence 567899999998752 234566788999999999999987 12246899999996 588888864 56
Q ss_pred CCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcc
Q 042809 69 LDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPE 142 (241)
Q Consensus 69 ~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE 142 (241)
+++..+..++.|+ ||+.|++||||+|+||+++.++.++|+|||++.......... .......+++.|+|||
T Consensus 103 l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~---~~~~~~~~~~~y~aPE 179 (336)
T cd07849 103 LSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHT---GFLTEYVATRWYRAPE 179 (336)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecccccccc---CCcCCcCcCCCccChH
Confidence 7777777666544 799999999999999999999999999999987543321111 1122345788999999
Q ss_pred cccc-cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHh----------------------cCCCCCC----
Q 042809 143 VLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIAC----------------------SNEKPHF---- 195 (241)
Q Consensus 143 ~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~----------------------~~~~~~~---- 195 (241)
.+.+ ..++.++|+||+|+++|++++|+.||.+.............. ....+..
T Consensus 180 ~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (336)
T cd07849 180 IMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNK 259 (336)
T ss_pred HhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHH
Confidence 8754 457889999999999999999999996543211111100000 0000010
Q ss_pred -ChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCc
Q 042809 196 -PTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAK 235 (241)
Q Consensus 196 -~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~ 235 (241)
.+..+.++.+++.+||+.+|.+|||+.++++||||+....
T Consensus 260 ~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~ 300 (336)
T cd07849 260 LFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHD 300 (336)
T ss_pred HhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCC
Confidence 1234567999999999999999999999999999987654
No 235
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=3.9e-37 Score=235.85 Aligned_cols=210 Identities=26% Similarity=0.385 Sum_probs=167.5
Q ss_pred CCcEEEEEeccchHHHHHHHHHHHHHhhcCCCcccc------cCCceeeeeecccCCCCHHHHHHHhCC-CCCHHHHHHH
Q 042809 5 TGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR------NGEKTVNIFMEYMAGGSLLDVAEKFGG-TLDAGVIRLY 77 (241)
Q Consensus 5 ~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~ 77 (241)
.|..+|+|........+.+.+|+.++++++|+|+++ ..++..++|+||+++++|.+++..... .+++..+..+
T Consensus 28 ~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ 107 (256)
T cd05082 28 RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF 107 (256)
T ss_pred cCCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHH
Confidence 577899999887666778999999999999999988 345678999999999999999987433 3566666555
Q ss_pred HH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCc
Q 042809 78 TK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDF 151 (241)
Q Consensus 78 ~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ 151 (241)
+. ++||++|++|+||+|+||+++.++.++|+|||++....... .....+..|+|||.+.+..++.
T Consensus 108 ~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~ 178 (256)
T cd05082 108 SLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ---------DTGKLPVKWTAPEALREKKFST 178 (256)
T ss_pred HHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccC---------CCCccceeecCHHHHccCCCCc
Confidence 54 44799999999999999999999999999999886432211 1122356799999998888899
Q ss_pred hhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 152 ATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 152 ~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
++|+||||+++|++++ |..||......... ........+..+...+..+.+++.+||+.+|++|||+.++++
T Consensus 179 ~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 179 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVV---PRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred hhhhHHHHHHHHHHHhCCCCCCCCCCHHHHH---HHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 9999999999999998 99999764333322 222233344555667889999999999999999999999975
No 236
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=3.5e-37 Score=244.70 Aligned_cols=219 Identities=21% Similarity=0.300 Sum_probs=166.5
Q ss_pred CCCCcEEEEEeccc---hHHHHHHHHHHHHHhhc-CCCcccc------cCCceeeeeecccCCCCHHHHHHHhC------
Q 042809 3 KGTGALFVVKSAES---EAGVQALRNEAEIRQSL-NSPNIGR------NGEKTVNIFMEYMAGGSLLDVAEKFG------ 66 (241)
Q Consensus 3 ~~~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~------~~~~~~~lv~e~~~~~~L~~~l~~~~------ 66 (241)
..+++.||+|.+.. ....+.+.+|+.++.++ .|+||++ ..+..+++++||+++++|.+++....
T Consensus 34 ~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~ 113 (337)
T cd05054 34 SASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPY 113 (337)
T ss_pred ccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhcccccccc
Confidence 35678999999873 23456688899999999 7999988 34567899999999999999986532
Q ss_pred ------------------------------------------------------CCCCHHHHHHHHHH------HhhcCC
Q 042809 67 ------------------------------------------------------GTLDAGVIRLYTKE------ILHGNG 86 (241)
Q Consensus 67 ------------------------------------------------------~~~~~~~~~~~~~~------~Lh~~~ 86 (241)
..++...+..++.| +||++|
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ 193 (337)
T cd05054 114 RNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRK 193 (337)
T ss_pred ccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 14555555555554 479999
Q ss_pred ccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCchhhHHHHHHHHHHHH
Q 042809 87 ILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMA 166 (241)
Q Consensus 87 ~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~ 166 (241)
++||||||+||+++.++.++|+|||++......... .......++..|+|||.+.+..++.++|||||||++|+++
T Consensus 194 ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~ 269 (337)
T cd05054 194 CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY----VRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIF 269 (337)
T ss_pred eecCCCCcceEEEeCCCcEEEeccccchhcccCcch----hhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHH
Confidence 999999999999999999999999999764321110 1112233567799999999999999999999999999999
Q ss_pred h-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcC
Q 042809 167 T-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227 (241)
Q Consensus 167 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 227 (241)
+ |..||.+...... .............+...+.++.+++.+||+.+|.+|||+++++++
T Consensus 270 t~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 270 SLGASPYPGVQIDEE--FCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred HcCCCCCCCCCccHH--HHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 8 9999976332221 111112223334455667889999999999999999999999875
No 237
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=2.9e-37 Score=240.82 Aligned_cols=222 Identities=27% Similarity=0.432 Sum_probs=165.0
Q ss_pred CCCCCcEEEEEeccchH---HHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 2 NKGTGALFVVKSAESEA---GVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
++.+|+.||+|.+..+. ....+.+|++++++++|+||++ ......++||||+. ++|.+++......++...
T Consensus 26 ~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~ 104 (291)
T cd07844 26 SKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLD-TDLKQYMDDCGGGLSMHN 104 (291)
T ss_pred EcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCC-CCHHHHHHhCCCCCCHHH
Confidence 45678999999976432 2245678999999999999988 66778999999997 499999987666777777
Q ss_pred HHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc-
Q 042809 74 IRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN- 146 (241)
Q Consensus 74 ~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~- 146 (241)
+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+
T Consensus 105 ~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~------~~~~~~~~~~~~~aPE~~~~~ 178 (291)
T cd07844 105 VRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPS------KTYSNEVVTLWYRPPDVLLGS 178 (291)
T ss_pred HHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCC------ccccccccccccCCcHHhhcC
Confidence 77666544 799999999999999999999999999999986432110 11112235778999999875
Q ss_pred cCCCchhhHHHHHHHHHHHHhCCCCCccchhc-hHHHHHHHHhcCC------------------CCCC--------Chhh
Q 042809 147 EGLDFATDIWSLGCMVIEMATGRPPWGDKISN-AAATLLKIACSNE------------------KPHF--------PTQF 199 (241)
Q Consensus 147 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~------------------~~~~--------~~~~ 199 (241)
..++.++|+||+|+++|++++|..||.+.... ............. .... ....
T Consensus 179 ~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (291)
T cd07844 179 TEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRL 258 (291)
T ss_pred cccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCC
Confidence 45788999999999999999999999654311 1111000000000 0000 0112
Q ss_pred H--HHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 200 F--KKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 200 ~--~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
. .++.+++.+||+.+|.+|||+.++++||||
T Consensus 259 ~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 259 DRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred CCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 2 678899999999999999999999999998
No 238
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=7.7e-37 Score=235.24 Aligned_cols=222 Identities=37% Similarity=0.650 Sum_probs=174.5
Q ss_pred CCCCCcEEEEEeccc-------hHHHHHHHHHHHHHhhcCCCcccc-------cCCceeeeeecccCCCCHHHHHHHhCC
Q 042809 2 NKGTGALFVVKSAES-------EAGVQALRNEAEIRQSLNSPNIGR-------NGEKTVNIFMEYMAGGSLLDVAEKFGG 67 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~-------~~~~~~~~~e~~~l~~l~h~~i~~-------~~~~~~~lv~e~~~~~~L~~~l~~~~~ 67 (241)
++.+|+.||+|.+.. ......+.+|+.++++++|+||++ .....+++|+||+++++|.+++... .
T Consensus 23 ~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~ 101 (264)
T cd06653 23 DADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAY-G 101 (264)
T ss_pred EcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHc-C
Confidence 567899999998641 234567889999999999999987 2245688999999999999999874 4
Q ss_pred CCCHHHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCc
Q 042809 68 TLDAGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141 (241)
Q Consensus 68 ~~~~~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aP 141 (241)
.++......++.| +||+.|++|+||+|+||+++.++.++|+|||++.......... .......++..|+||
T Consensus 102 ~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~---~~~~~~~~~~~y~aP 178 (264)
T cd06653 102 ALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSG---TGIKSVTGTPYWMSP 178 (264)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccccC---ccccccCCcccccCH
Confidence 4666666655554 4799999999999999999999999999999987543211100 111234578889999
Q ss_pred ccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCCh
Q 042809 142 EVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSA 221 (241)
Q Consensus 142 E~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~ 221 (241)
|.+.+..++.++|+||||+++|++++|..||..... .............+..+..++..+.+++++||. +|..|||+
T Consensus 179 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~ 255 (264)
T cd06653 179 EVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA--MAAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTA 255 (264)
T ss_pred hhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH--HHHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccH
Confidence 999888889999999999999999999999976432 222333333344566788888999999999999 57999999
Q ss_pred HHHhcCCCC
Q 042809 222 EELLNHTFI 230 (241)
Q Consensus 222 ~~~l~~p~~ 230 (241)
.+++.|||.
T Consensus 256 ~~~~~~~~~ 264 (264)
T cd06653 256 EFLLRHPFV 264 (264)
T ss_pred HHHhcCCCC
Confidence 999999985
No 239
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=6.2e-37 Score=238.95 Aligned_cols=216 Identities=24% Similarity=0.395 Sum_probs=167.9
Q ss_pred CCCcEEEEEeccchH--HHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC----------
Q 042809 4 GTGALFVVKSAESEA--GVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG---------- 66 (241)
Q Consensus 4 ~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~---------- 66 (241)
.++..+++|.+.... ..+.+.+|+.++.+++|+||++ ......++||||+++++|.+++....
T Consensus 33 ~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~ 112 (291)
T cd05094 33 KDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQ 112 (291)
T ss_pred CcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccc
Confidence 456778899877443 3467899999999999999988 66778999999999999999998642
Q ss_pred -----CCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCc
Q 042809 67 -----GTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGT 135 (241)
Q Consensus 67 -----~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~ 135 (241)
..++...+..++.|+ ||++|++||||+|+||+++.++.++|+|||++....... .........++
T Consensus 113 ~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~----~~~~~~~~~~~ 188 (291)
T cd05094 113 PRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTD----YYRVGGHTMLP 188 (291)
T ss_pred cccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCc----eeecCCCCCcc
Confidence 235666666665544 799999999999999999999999999999986543211 01111223457
Q ss_pred ccccCcccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccC
Q 042809 136 QLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERK 214 (241)
Q Consensus 136 ~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 214 (241)
..|+|||.+.+..++.++|+||||+++|++++ |..||.......... ..........+...+..+.+++.+||+.+
T Consensus 189 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 265 (291)
T cd05094 189 IRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIE---CITQGRVLERPRVCPKEVYDIMLGCWQRE 265 (291)
T ss_pred eeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH---HHhCCCCCCCCccCCHHHHHHHHHHcccC
Confidence 78999999998889999999999999999999 999986644333222 22223333445556788999999999999
Q ss_pred CCCCCChHHHhc
Q 042809 215 PEKRWSAEELLN 226 (241)
Q Consensus 215 p~~Rps~~~~l~ 226 (241)
|.+|||+.++++
T Consensus 266 P~~Rpt~~~v~~ 277 (291)
T cd05094 266 PQQRLNIKEIYK 277 (291)
T ss_pred hhhCcCHHHHHH
Confidence 999999999875
No 240
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3.2e-37 Score=238.49 Aligned_cols=220 Identities=35% Similarity=0.570 Sum_probs=167.5
Q ss_pred CCCCCcEEEEEeccch-HHHHHHHHHHHHHhhc-CCCcccc-----c------CCceeeeeecccCCCCHHHHHHHh---
Q 042809 2 NKGTGALFVVKSAESE-AGVQALRNEAEIRQSL-NSPNIGR-----N------GEKTVNIFMEYMAGGSLLDVAEKF--- 65 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~-----~------~~~~~~lv~e~~~~~~L~~~l~~~--- 65 (241)
++.++..+++|.+... ...+.+.+|+.+++++ .|+||++ . ....+++||||+++++|.+++...
T Consensus 27 ~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~ 106 (275)
T cd06608 27 HKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKK 106 (275)
T ss_pred ECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhc
Confidence 4567889999997743 3356789999999999 6999987 1 245689999999999999998763
Q ss_pred CCCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCccccc
Q 042809 66 GGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWM 139 (241)
Q Consensus 66 ~~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (241)
+..++...+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||.+....... .......++..|+
T Consensus 107 ~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~------~~~~~~~~~~~y~ 180 (275)
T cd06608 107 GKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTL------GRRNTFIGTPYWM 180 (275)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccceecccch------hhhcCcccccccc
Confidence 3567777766665544 799999999999999999999999999999886443211 1112345788899
Q ss_pred Ccccccc-----cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCC--CChhhHHHHHHHHHHhhc
Q 042809 140 APEVLRN-----EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPH--FPTQFFKKVLDFLAKCLE 212 (241)
Q Consensus 140 aPE~~~~-----~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~ 212 (241)
|||.+.. ..++.++|+||||+++|++++|..||....... ..... .....+. .+...+..+.+++.+||.
T Consensus 181 aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~ 257 (275)
T cd06608 181 APEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR--ALFKI-PRNPPPTLKSPENWSKKFNDFISECLI 257 (275)
T ss_pred CHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH--HHHHh-hccCCCCCCchhhcCHHHHHHHHHHhh
Confidence 9998753 346778999999999999999999997532211 11111 1111111 123356789999999999
Q ss_pred cCCCCCCChHHHhcCCCC
Q 042809 213 RKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 213 ~~p~~Rps~~~~l~~p~~ 230 (241)
.+|.+|||+.+++.|||+
T Consensus 258 ~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 258 KNYEQRPFMEELLEHPFI 275 (275)
T ss_pred cChhhCcCHHHHhcCCCC
Confidence 999999999999999996
No 241
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.4e-37 Score=246.47 Aligned_cols=235 Identities=25% Similarity=0.377 Sum_probs=170.3
Q ss_pred CCCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC-CCCCH
Q 042809 2 NKGTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG-GTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~ 71 (241)
|+.+|+.||+|.... ....+.+.+|+.+++.++||||++ ..++..++|+||+.+++|.+++.... ..+++
T Consensus 21 ~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~ 100 (328)
T cd08226 21 HTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSE 100 (328)
T ss_pred EcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHHHHHhhcccCCCH
Confidence 567899999999762 234577899999999999999988 56778999999999999999988642 34666
Q ss_pred HHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCc-cccccccccCcccccCcccc
Q 042809 72 GVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGN-LKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 72 ~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~aPE~~ 144 (241)
..+..++. ++||+.|++||||||+||+++.++.++++||+.+........... .........++..|+|||.+
T Consensus 101 ~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 180 (328)
T cd08226 101 ALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELL 180 (328)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhh
Confidence 66655554 448999999999999999999999999999986543322111000 00000112245679999999
Q ss_pred ccc--CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHh----------------------------------
Q 042809 145 RNE--GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIAC---------------------------------- 188 (241)
Q Consensus 145 ~~~--~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~---------------------------------- 188 (241)
.+. .++.++|+||+|+++|++++|..||................
T Consensus 181 ~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (328)
T cd08226 181 RQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVA 260 (328)
T ss_pred cCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhc
Confidence 763 46889999999999999999999997643222111100000
Q ss_pred ---------cCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCcc
Q 042809 189 ---------SNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKK 236 (241)
Q Consensus 189 ---------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~~ 236 (241)
.......+...+..+.+|+++||..+|.+|||++++++||||+...+.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~ 317 (328)
T cd08226 261 AGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQ 317 (328)
T ss_pred cccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHHh
Confidence 000011123456789999999999999999999999999999776553
No 242
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=6.6e-37 Score=237.20 Aligned_cols=217 Identities=19% Similarity=0.303 Sum_probs=165.3
Q ss_pred CCCcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCC--------
Q 042809 4 GTGALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGG-------- 67 (241)
Q Consensus 4 ~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~-------- 67 (241)
.++..||+|.+... .....+.+|+.+++.++||||++ ..+...++||||+.+++|.+++.....
T Consensus 34 ~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 113 (277)
T cd05062 34 EPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQ 113 (277)
T ss_pred CceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccc
Confidence 35678999987632 33456889999999999999988 566789999999999999999976432
Q ss_pred -CCCHHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccC
Q 042809 68 -TLDAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMA 140 (241)
Q Consensus 68 -~~~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 140 (241)
.++...+..++. .+||+.|++|+||||+||+++.++.++|+|||++........ ........++..|+|
T Consensus 114 ~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~y~a 189 (277)
T cd05062 114 APPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY----YRKGGKGLLPVRWMS 189 (277)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccCCcce----eecCCCCccCHhhcC
Confidence 133444443333 558999999999999999999999999999999864432111 011112234678999
Q ss_pred cccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC
Q 042809 141 PEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219 (241)
Q Consensus 141 PE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 219 (241)
||.+.+..++.++|+||||+++|++++ |..||.+...... .........+..+...+..+.+++.+||+.+|.+||
T Consensus 190 PE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 266 (277)
T cd05062 190 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQV---LRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRP 266 (277)
T ss_pred hhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH---HHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCc
Confidence 999998889999999999999999999 7889876543322 222223334455666778899999999999999999
Q ss_pred ChHHHhcC
Q 042809 220 SAEELLNH 227 (241)
Q Consensus 220 s~~~~l~~ 227 (241)
|+.+++..
T Consensus 267 s~~e~l~~ 274 (277)
T cd05062 267 SFLEIISS 274 (277)
T ss_pred CHHHHHHH
Confidence 99999864
No 243
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=5.5e-37 Score=238.32 Aligned_cols=219 Identities=26% Similarity=0.415 Sum_probs=165.9
Q ss_pred CCCCcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-------cCCceeeeeecccCCCCHHHHHHHhCCCCCHH
Q 042809 3 KGTGALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-------NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAG 72 (241)
Q Consensus 3 ~~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 72 (241)
..++..||+|.+... .....+.+|+++++.++||||++ ......++||||+++++|.+++.. ..+++.
T Consensus 30 ~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~l~~~ 107 (283)
T cd05080 30 DGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPK--HKLNLA 107 (283)
T ss_pred CCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHH--cCCCHH
Confidence 457889999998743 34567889999999999999988 224568999999999999999986 357777
Q ss_pred HHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 73 VIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 73 ~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
.+..++.|+ ||++|++|+||+|+||+++.++.++|+|||++......... ........++..|+|||.+.+
T Consensus 108 ~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~~~~~PE~~~~ 184 (283)
T cd05080 108 QLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY---YRVREDGDSPVFWYAVECLKE 184 (283)
T ss_pred HHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchh---hccCCCCCCCceeeCHhHhcc
Confidence 777766654 79999999999999999999999999999998754331110 000112234567999999988
Q ss_pred cCCCchhhHHHHHHHHHHHHhCCCCCccchhchH------------HHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccC
Q 042809 147 EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAA------------ATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERK 214 (241)
Q Consensus 147 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 214 (241)
..++.++|+||||+++|++++|..||........ ...............+...+..+.+++.+||+.+
T Consensus 185 ~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~ 264 (283)
T cd05080 185 NKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETE 264 (283)
T ss_pred cCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccC
Confidence 8889999999999999999999999854321110 0011111112222334556789999999999999
Q ss_pred CCCCCChHHHhc
Q 042809 215 PEKRWSAEELLN 226 (241)
Q Consensus 215 p~~Rps~~~~l~ 226 (241)
|.+|||++++++
T Consensus 265 p~~Rps~~~i~~ 276 (283)
T cd05080 265 AKFRPTFRSLIP 276 (283)
T ss_pred hhhCCCHHHHHH
Confidence 999999999985
No 244
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=6.8e-37 Score=240.46 Aligned_cols=219 Identities=32% Similarity=0.475 Sum_probs=170.5
Q ss_pred CCCCCcEEEEEeccc-----hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAES-----EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+|+.||+|.+.. ....+.+.+|+.+++.++||||++ ...+..++|+||+. |+|.+++......+++
T Consensus 36 ~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~~~~~l~~ 114 (307)
T cd06607 36 DVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCL-GSASDILEVHKKPLQE 114 (307)
T ss_pred EcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhC-CCHHHHHHHcccCCCH
Confidence 346789999998752 233456889999999999999988 56678999999997 5888887765566777
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||++...... ....++..|+|||.+.
T Consensus 115 ~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~----------~~~~~~~~y~aPE~~~ 184 (307)
T cd06607 115 VEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA----------NSFVGTPYWMAPEVIL 184 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC----------CCccCCccccCceeee
Confidence 7776665544 79999999999999999999999999999988643221 1234678899999874
Q ss_pred ---ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCC-ChhhHHHHHHHHHHhhccCCCCCCCh
Q 042809 146 ---NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHF-PTQFFKKVLDFLAKCLERKPEKRWSA 221 (241)
Q Consensus 146 ---~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rps~ 221 (241)
...++.++|+||||+++|++++|..||......... .. ......+.. +...+..+.+++.+||+.+|.+|||+
T Consensus 185 ~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~ 261 (307)
T cd06607 185 AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL--YH-IAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSS 261 (307)
T ss_pred ccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHH--HH-HhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCH
Confidence 355788999999999999999999999764322211 11 111222222 23466789999999999999999999
Q ss_pred HHHhcCCCCCCCC
Q 042809 222 EELLNHTFISGNA 234 (241)
Q Consensus 222 ~~~l~~p~~~~~~ 234 (241)
.+++.||||....
T Consensus 262 ~~il~~~~~~~~~ 274 (307)
T cd06607 262 EELLKHRFVLRER 274 (307)
T ss_pred HHHhcChhhcccC
Confidence 9999999997654
No 245
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1e-36 Score=232.72 Aligned_cols=216 Identities=24% Similarity=0.356 Sum_probs=168.9
Q ss_pred CCCcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHH
Q 042809 4 GTGALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIR 75 (241)
Q Consensus 4 ~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 75 (241)
.++..+|+|.+... .....+.+|+.+++.++||||++ ...+..++||||+++++|.+++......+++..+.
T Consensus 17 ~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 96 (250)
T cd05085 17 KDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLV 96 (250)
T ss_pred cCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHH
Confidence 35788999987632 33456889999999999999988 56678999999999999999998755667777776
Q ss_pred HHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCC
Q 042809 76 LYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGL 149 (241)
Q Consensus 76 ~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~ 149 (241)
.++.++ ||+.|++|+||+|+||+++.++.++|+|||++........ .......++..|+|||.+.+..+
T Consensus 97 ~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~ 171 (250)
T cd05085 97 KFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY-----SSSGLKQIPIKWTAPEALNYGRY 171 (250)
T ss_pred HHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceecccccc-----ccCCCCCCcccccCHHHhccCCC
Confidence 666544 7999999999999999999999999999999864322110 01111223567999999988888
Q ss_pred CchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcC
Q 042809 150 DFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227 (241)
Q Consensus 150 ~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 227 (241)
+.++|+||||+++|++++ |..||........... .........+...+..+.+++.+||+.+|.+|||+.++++.
T Consensus 172 ~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 247 (250)
T cd05085 172 SSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQ---VEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKE 247 (250)
T ss_pred CchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH---HHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 999999999999999998 9999976543332222 22233344556678899999999999999999999999763
No 246
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=4.1e-37 Score=238.86 Aligned_cols=220 Identities=23% Similarity=0.362 Sum_probs=164.6
Q ss_pred CCCCCcEEEEEeccch---HHHHHHHHHHHHHhhcC-CCcccc-----cCC--ceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 2 NKGTGALFVVKSAESE---AGVQALRNEAEIRQSLN-SPNIGR-----NGE--KTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~-h~~i~~-----~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
++.++..||+|.+... .......+|+..+.++. |+|+++ ... +..++|+||+. ++|.+++......++
T Consensus 20 ~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~ 98 (282)
T cd07831 20 SRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMD-MNLYELIKGRKRPLP 98 (282)
T ss_pred EcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCC-ccHHHHHHhccCCCC
Confidence 4568899999987642 22234457888898886 999987 333 78999999997 588888887556778
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+..+..++.|+ ||+.|++|+||+|+||+++. +.++|+|||++....... ......++..|+|||.+
T Consensus 99 ~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~-------~~~~~~~~~~y~aPE~~ 170 (282)
T cd07831 99 EKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP-------PYTEYISTRWYRAPECL 170 (282)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCC-------CcCCCCCCcccCChhHh
Confidence 88877776655 79999999999999999999 999999999987553311 11123467889999977
Q ss_pred cc-cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcC--------------CCCCC-----------Chh
Q 042809 145 RN-EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN--------------EKPHF-----------PTQ 198 (241)
Q Consensus 145 ~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------------~~~~~-----------~~~ 198 (241)
.. ..++.++|+||+|+++|++++|..||...+.............. ..... ...
T Consensus 171 ~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (282)
T cd07831 171 LTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPN 250 (282)
T ss_pred hcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHccc
Confidence 54 45688999999999999999999999764332221111110000 00011 123
Q ss_pred hHHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 199 FFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 199 ~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
.+..+.++|.+||+.+|.+|||++++++||||
T Consensus 251 ~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 251 ASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred ccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 56889999999999999999999999999997
No 247
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=3.1e-37 Score=239.66 Aligned_cols=227 Identities=32% Similarity=0.473 Sum_probs=170.0
Q ss_pred CCCCCcEEEEEeccch---HHHHHHHHHHHH-HhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHh---CCCC
Q 042809 2 NKGTGALFVVKSAESE---AGVQALRNEAEI-RQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF---GGTL 69 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~---~~~~~~~~e~~~-l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~ 69 (241)
++.+|+.||+|.+... .....+..|+.. ++.+.||||++ ..++..|+|+||++ ++|.+++... +..+
T Consensus 22 ~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~ 100 (283)
T cd06617 22 HVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD-TSLDKFYKKVYDKGLTI 100 (283)
T ss_pred EcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc-ccHHHHHHHhccCCCCC
Confidence 5678999999987632 223445556665 56668999998 55678999999996 6898887652 3457
Q ss_pred CHHHHHHHHHHH------hhcC-CccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcc
Q 042809 70 DAGVIRLYTKEI------LHGN-GILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPE 142 (241)
Q Consensus 70 ~~~~~~~~~~~~------Lh~~-~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE 142 (241)
++..+..++.|+ ||++ +++||||+|+||+++.++.++|+|||++....... ......++..|+|||
T Consensus 101 ~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~~~~y~aPE 173 (283)
T cd06617 101 PEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV-------AKTIDAGCKPYMAPE 173 (283)
T ss_pred CHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccccc-------ccccccCCccccChh
Confidence 787777666654 7987 99999999999999999999999999987543211 111234678899999
Q ss_pred cccc----cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCC-hhhHHHHHHHHHHhhccCCCC
Q 042809 143 VLRN----EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP-TQFFKKVLDFLAKCLERKPEK 217 (241)
Q Consensus 143 ~~~~----~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~ 217 (241)
.+.+ ..++.++|+||+|+++|++++|+.||...... ... .........+..+ ..++.++.+++.+||..+|.+
T Consensus 174 ~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~ 251 (283)
T cd06617 174 RINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP-FQQ-LKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKE 251 (283)
T ss_pred hcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC-HHH-HHHHHhcCCCCCCccccCHHHHHHHHHHccCChhh
Confidence 8865 34578999999999999999999999653221 111 1111222223332 346788999999999999999
Q ss_pred CCChHHHhcCCCCCCCCccCC
Q 042809 218 RWSAEELLNHTFISGNAKKNS 238 (241)
Q Consensus 218 Rps~~~~l~~p~~~~~~~~~~ 238 (241)
|||+++++.||||.....+++
T Consensus 252 Rp~~~~il~~~~~~~~~~~~~ 272 (283)
T cd06617 252 RPNYPELLQHPFFELHLSKNT 272 (283)
T ss_pred CcCHHHHhcCchhhhcccccH
Confidence 999999999999998776543
No 248
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=8.6e-37 Score=235.27 Aligned_cols=218 Identities=26% Similarity=0.429 Sum_probs=167.4
Q ss_pred CCCCCcEEEEEeccc-----hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHh---CCC
Q 042809 2 NKGTGALFVVKSAES-----EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF---GGT 68 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~---~~~ 68 (241)
++.+|..+|+|.+.. ......+.+|+.+++.+.|+||++ ..++..++++||+++++|.+++... ...
T Consensus 23 ~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~ 102 (267)
T cd08229 23 CLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRL 102 (267)
T ss_pred ecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCC
Confidence 456899999997653 234467889999999999999988 4567899999999999999998742 345
Q ss_pred CCHHHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcc
Q 042809 69 LDAGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPE 142 (241)
Q Consensus 69 ~~~~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE 142 (241)
+++..+..++.+ +||+.|++|+||+|+||+++.++.++|+|||++........ ......++..|+|||
T Consensus 103 ~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~------~~~~~~~~~~~~ape 176 (267)
T cd08229 103 IPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT------AAHSLVGTPYYMSPE 176 (267)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCc------ccccccCCcCccCHH
Confidence 676666655554 47999999999999999999999999999998865433111 112345788899999
Q ss_pred cccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCC-CChhhHHHHHHHHHHhhccCCCCCCCh
Q 042809 143 VLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPH-FPTQFFKKVLDFLAKCLERKPEKRWSA 221 (241)
Q Consensus 143 ~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~ 221 (241)
.+.+..++.++|+||||+++|++++|..||.+..... ............+. .+...+..+.+++.+||..+|.+|||+
T Consensus 177 ~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~ 255 (267)
T cd08229 177 RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-YSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDI 255 (267)
T ss_pred HhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchH-HHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCH
Confidence 9988889999999999999999999999996543221 12212211122222 233577899999999999999999999
Q ss_pred HHHhc
Q 042809 222 EELLN 226 (241)
Q Consensus 222 ~~~l~ 226 (241)
+++++
T Consensus 256 ~~i~~ 260 (267)
T cd08229 256 TYVYD 260 (267)
T ss_pred HHHHH
Confidence 97764
No 249
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=5.9e-37 Score=234.86 Aligned_cols=215 Identities=26% Similarity=0.394 Sum_probs=168.2
Q ss_pred CCcEEEEEeccch-HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHH
Q 042809 5 TGALFVVKSAESE-AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYT 78 (241)
Q Consensus 5 ~~~~vaiK~~~~~-~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 78 (241)
++..+|+|.+... .....+.+|+.+++.++||||++ ...+..++|+||+++++|.+++......+++..+..++
T Consensus 27 ~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~ 106 (256)
T cd05059 27 GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMC 106 (256)
T ss_pred CCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHH
Confidence 4567899987643 23456888999999999999987 56678999999999999999998755667777776666
Q ss_pred HHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCch
Q 042809 79 KEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFA 152 (241)
Q Consensus 79 ~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~ 152 (241)
.|+ ||+.|++|+||+|+||+++.++.++|+|||++....+... .......++..|+|||.+.+..++.+
T Consensus 107 ~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~y~~Pe~~~~~~~~~~ 181 (256)
T cd05059 107 SDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY-----TSSQGTKFPVKWAPPEVFDYSRFSSK 181 (256)
T ss_pred HHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccc-----cccCCCCCCccccCHHHhccCCCCch
Confidence 544 7999999999999999999999999999999865432110 00111123457999999998889999
Q ss_pred hhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcC
Q 042809 153 TDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227 (241)
Q Consensus 153 ~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 227 (241)
+|+||||+++|++++ |..||......... ...........+...+..+.+++.+||..+|++|||+.++++.
T Consensus 182 ~Di~slG~il~~l~~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 182 SDVWSFGVLMWEVFSEGKMPYERFSNSEVV---ESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred hhHHHHHHHHHHHhccCCCCCCCCCHHHHH---HHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 999999999999999 89999765433322 2222233344556678899999999999999999999999864
No 250
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1e-37 Score=249.69 Aligned_cols=206 Identities=32% Similarity=0.533 Sum_probs=171.5
Q ss_pred chHHHHHHHHHHHHHhhcCCCcccc-------cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHHHHH------h
Q 042809 16 SEAGVQALRNEAEIRQSLNSPNIGR-------NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------L 82 (241)
Q Consensus 16 ~~~~~~~~~~e~~~l~~l~h~~i~~-------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~------L 82 (241)
++...++|..|+.+|+.|+||||++ ....++.+|+|.|..|+|..|++++ .......++.|++|| |
T Consensus 81 ~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~-~~vn~kaik~W~RQILkGL~yL 159 (632)
T KOG0584|consen 81 SPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKH-RRVNIKAIKSWCRQILKGLVYL 159 (632)
T ss_pred ChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecccCCcHHHHHHHh-ccCCHHHHHHHHHHHHHHhhhh
Confidence 4556788999999999999999998 4456799999999999999999985 667888888888887 4
Q ss_pred hcC--CccccCCCCCcEEeec-CCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCchhhHHHHH
Q 042809 83 HGN--GILHCDLKCNNVLLGS-HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLG 159 (241)
Q Consensus 83 h~~--~~vH~dl~p~Nil~~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG 159 (241)
|++ .|+|||||.+|||++. .|.|||+|+|+|..... ......+|||.|||||.+. ..|...+||||||
T Consensus 160 Hs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~--------s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFG 230 (632)
T KOG0584|consen 160 HSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK--------SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFG 230 (632)
T ss_pred hcCCCCccccccccceEEEcCCcCceeecchhHHHHhhc--------cccceeccCccccChHHHh-hhcchhhhhhhhh
Confidence 665 4999999999999976 48999999999987655 2224478999999999997 6688999999999
Q ss_pred HHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCC-CChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCC
Q 042809 160 CMVIEMATGRPPWGDKISNAAATLLKIACSNEKPH-FPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNA 234 (241)
Q Consensus 160 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~ 234 (241)
+++.||+|+..||..... ...+.+....+.+|. +..--.+++++||.+||.. ...|+|+.++|.||||+...
T Consensus 231 MCmLEMvT~eYPYsEC~n--~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d~ 303 (632)
T KOG0584|consen 231 MCMLEMVTSEYPYSECTN--PAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDEDG 303 (632)
T ss_pred HHHHHHHhccCChhhhCC--HHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhcccc
Confidence 999999999999987633 334455555555443 3344457999999999999 99999999999999998863
No 251
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=5.2e-37 Score=238.51 Aligned_cols=222 Identities=29% Similarity=0.453 Sum_probs=167.4
Q ss_pred CCCCCcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC--CCCCH
Q 042809 2 NKGTGALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG--GTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~ 71 (241)
++.+|..||+|.+... .....+.+|+.++++++|+||++ ...+..++|+||+++ +|.+++.... ..+++
T Consensus 21 ~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~ 99 (284)
T cd07836 21 NRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDP 99 (284)
T ss_pred ECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCH
Confidence 4678999999987632 23456788999999999999988 566789999999974 8999887644 45777
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+.
T Consensus 100 ~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~------~~~~~~~~~~~y~~PE~~~ 173 (284)
T cd07836 100 NTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV------NTFSNEVVTLWYRAPDVLL 173 (284)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc------cccccccccccccChHHhc
Confidence 7776666544 799999999999999999999999999999986543211 1112234578899999986
Q ss_pred cc-CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhc--------------CCCCC-----------CChhh
Q 042809 146 NE-GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACS--------------NEKPH-----------FPTQF 199 (241)
Q Consensus 146 ~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--------------~~~~~-----------~~~~~ 199 (241)
+. .++.++|+||||+++|++++|..||.+............... ..... ..+..
T Consensus 174 ~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (284)
T cd07836 174 GSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHA 253 (284)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhc
Confidence 64 468899999999999999999999976543322111111000 00000 01234
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 200 ~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
+..+.+++.+||+.+|.+||+++++++||||
T Consensus 254 ~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 254 DPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred CcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 5678999999999999999999999999998
No 252
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1e-36 Score=236.82 Aligned_cols=218 Identities=21% Similarity=0.349 Sum_probs=167.4
Q ss_pred CCCCcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC--------
Q 042809 3 KGTGALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG-------- 66 (241)
Q Consensus 3 ~~~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~-------- 66 (241)
..++..|++|.+.. ......+.+|+.+++.++||||++ ......|+||||+++++|.+++....
T Consensus 31 ~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 110 (283)
T cd05090 31 MDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCS 110 (283)
T ss_pred CCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccc
Confidence 45678899999873 233467889999999999999988 56678999999999999999986432
Q ss_pred --------CCCCHHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccc
Q 042809 67 --------GTLDAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSI 132 (241)
Q Consensus 67 --------~~~~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~ 132 (241)
..++...+..++. ++||++|++|+||+|+||+++.++.++|+|||++........ .......
T Consensus 111 ~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~ 186 (283)
T cd05090 111 SDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADY----YRVQPKS 186 (283)
T ss_pred cccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCCcc----eecccCC
Confidence 1244444444444 458999999999999999999999999999999975432111 1111223
Q ss_pred cCcccccCcccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhh
Q 042809 133 GGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCL 211 (241)
Q Consensus 133 ~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 211 (241)
.++..|+|||.+.+..++.++|+||||+++|++++ |..||.+...... ............+...+..+.+++.+||
T Consensus 187 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~cl 263 (283)
T cd05090 187 LLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEV---IEMVRKRQLLPCSEDCPPRMYSLMTECW 263 (283)
T ss_pred CccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH---HHHHHcCCcCCCCCCCCHHHHHHHHHHc
Confidence 35677999999988889999999999999999998 9999976433222 2222223344456667889999999999
Q ss_pred ccCCCCCCChHHHhcC
Q 042809 212 ERKPEKRWSAEELLNH 227 (241)
Q Consensus 212 ~~~p~~Rps~~~~l~~ 227 (241)
+.+|.+||++.+++++
T Consensus 264 ~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 264 QEGPSRRPRFKDIHTR 279 (283)
T ss_pred ccCcccCcCHHHHHHH
Confidence 9999999999999765
No 253
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.3e-36 Score=236.43 Aligned_cols=222 Identities=26% Similarity=0.400 Sum_probs=166.2
Q ss_pred CCCCCcEEEEEeccc--hHHHHHHHHHHHHHhhcCCCcccc-------cCCceeeeeecccCCCCHHHHHHHhCCCCCHH
Q 042809 2 NKGTGALFVVKSAES--EAGVQALRNEAEIRQSLNSPNIGR-------NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAG 72 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~--~~~~~~~~~e~~~l~~l~h~~i~~-------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 72 (241)
+..++..||+|.+.. ....+.+.+|++++.+++||||++ .....+++|+||+++++|.+++......++..
T Consensus 29 ~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~ 108 (284)
T cd05081 29 QDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHR 108 (284)
T ss_pred cCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHH
Confidence 456889999999763 344567899999999999999987 23456899999999999999998755567777
Q ss_pred HHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 73 VIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 73 ~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
.+..++.|+ ||++|++|+||+|+||+++.++.++|+|||++.......... .......++..|+|||.+.+
T Consensus 109 ~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~ 185 (284)
T cd05081 109 KLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYY---KVREPGESPIFWYAPESLTE 185 (284)
T ss_pred HHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCcce---eecCCCCCceEeeCHHHhcc
Confidence 766666544 799999999999999999999999999999987553311100 00011123456999999988
Q ss_pred cCCCchhhHHHHHHHHHHHHhCCCCCccchhchH-------------HHHHHHHhcCCCCCCChhhHHHHHHHHHHhhcc
Q 042809 147 EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAA-------------ATLLKIACSNEKPHFPTQFFKKVLDFLAKCLER 213 (241)
Q Consensus 147 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 213 (241)
..++.++|+||||+++|++++|..++........ ...............+...+..+.+++.+||..
T Consensus 186 ~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~ 265 (284)
T cd05081 186 SKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNN 265 (284)
T ss_pred CCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccC
Confidence 8899999999999999999998766543211100 011111112223334456678899999999999
Q ss_pred CCCCCCChHHHhc
Q 042809 214 KPEKRWSAEELLN 226 (241)
Q Consensus 214 ~p~~Rps~~~~l~ 226 (241)
+|.+|||+.+++.
T Consensus 266 ~p~~Rpt~~ei~~ 278 (284)
T cd05081 266 DPSQRPSFSELAL 278 (284)
T ss_pred ChhhCCCHHHHHH
Confidence 9999999999976
No 254
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=6.4e-37 Score=237.92 Aligned_cols=222 Identities=27% Similarity=0.403 Sum_probs=167.1
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC-CCCCH
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG-GTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~ 71 (241)
++.+|+.||+|.+..+ .....+.+|++.++.++|||+++ ...+..++|+||++ ++|.+++.... ..+++
T Consensus 20 ~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~ 98 (283)
T cd07835 20 DKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-LDLKKYMDSSPLTGLDP 98 (283)
T ss_pred EcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-cCHHHHHhhCCCCCCCH
Confidence 4568999999987633 22356889999999999999998 66789999999995 69999988743 35677
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++.|+ ||+.+++||||+|+||+++.++.++|+|||.+....... .......++..|+|||.+.
T Consensus 99 ~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~------~~~~~~~~~~~~~aPE~~~ 172 (283)
T cd07835 99 PLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV------RTYTHEVVTLWYRAPEILL 172 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc------cccCccccccCCCCCceee
Confidence 7766665544 799999999999999999999999999999986442211 1112234578899999887
Q ss_pred cc-CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHh---------------------cC----CCCCCChhh
Q 042809 146 NE-GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIAC---------------------SN----EKPHFPTQF 199 (241)
Q Consensus 146 ~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~---------------------~~----~~~~~~~~~ 199 (241)
+. .++.++|+||||+++|++++|..||................ .. ........+
T Consensus 173 ~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (283)
T cd07835 173 GSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNL 252 (283)
T ss_pred cCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCC
Confidence 64 46889999999999999999999996543221111100000 00 000112345
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 200 ~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
+..+.+++.+||+.+|.+|||+++++.||||
T Consensus 253 ~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 253 DEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 5789999999999999999999999999998
No 255
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=8.2e-37 Score=238.27 Aligned_cols=221 Identities=29% Similarity=0.395 Sum_probs=163.6
Q ss_pred CCCCCcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 2 NKGTGALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
++.+|+.||+|.+... .....+.+|+.+++.++|+||++ ..+...|+|+||+. ++|.+++......+....
T Consensus 26 ~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~ 104 (291)
T cd07870 26 SRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-TDLAQYMIQHPGGLHPYN 104 (291)
T ss_pred EcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-CCHHHHHHhCCCCCCHHH
Confidence 4567899999997643 22345778999999999999987 56678999999995 688887766445566666
Q ss_pred HHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccccc
Q 042809 74 IRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNE 147 (241)
Q Consensus 74 ~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~ 147 (241)
+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+.
T Consensus 105 ~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~ 178 (291)
T cd07870 105 VRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS------QTYSSEVVTLWYRPPDVLLGA 178 (291)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCC------CCCCCccccccccCCceeecC
Confidence 66665544 799999999999999999999999999999986532211 111223468889999998763
Q ss_pred -CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHh-cCC--------------------CCCCC---------
Q 042809 148 -GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIAC-SNE--------------------KPHFP--------- 196 (241)
Q Consensus 148 -~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~--------------------~~~~~--------- 196 (241)
.++.++|+||||+++|++++|..||...... ......... .+. ....+
T Consensus 179 ~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (291)
T cd07870 179 TDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV-FEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKR 257 (291)
T ss_pred CCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH-HHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccc
Confidence 4788999999999999999999999654321 111111000 000 00000
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 197 TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 197 ~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
...+..+.+++.+|+..+|.+|||+.+++.||||
T Consensus 258 ~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 258 LSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred cCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 0124578899999999999999999999999997
No 256
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=9.3e-37 Score=234.12 Aligned_cols=217 Identities=27% Similarity=0.416 Sum_probs=176.3
Q ss_pred CCCcEEEEEeccchH---HHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHh--------CC
Q 042809 4 GTGALFVVKSAESEA---GVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF--------GG 67 (241)
Q Consensus 4 ~~~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~--------~~ 67 (241)
.++..|++|.+.... ..+.+.+|++.+..++|+|+++ ......++||||+++++|.+++... ..
T Consensus 21 ~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 100 (262)
T cd00192 21 GKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKS 100 (262)
T ss_pred CCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccc
Confidence 348899999987432 2577899999999999999988 5678899999999999999999986 46
Q ss_pred CCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCc
Q 042809 68 TLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141 (241)
Q Consensus 68 ~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aP 141 (241)
.+++..+..++.|+ ||++|++|+||+|+||+++.++.++|+|||.+........ ........++..|+||
T Consensus 101 ~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~y~aP 176 (262)
T cd00192 101 TLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY----YRKKTGGKLPIRWMAP 176 (262)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccccc----cccccCCCcCccccCH
Confidence 78888888777765 7999999999999999999999999999999976544211 1112233467889999
Q ss_pred ccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCC
Q 042809 142 EVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWS 220 (241)
Q Consensus 142 E~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 220 (241)
|.+.+..++.++|+||+|+++|++++ |..||......... ...........+..++.++.+++.+||..+|.+|||
T Consensus 177 E~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 253 (262)
T cd00192 177 ESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVL---EYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPT 253 (262)
T ss_pred HHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHH---HHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcC
Confidence 99988888999999999999999999 69999776433322 222224445566777899999999999999999999
Q ss_pred hHHHhcC
Q 042809 221 AEELLNH 227 (241)
Q Consensus 221 ~~~~l~~ 227 (241)
+++++.+
T Consensus 254 ~~~l~~~ 260 (262)
T cd00192 254 FSELVER 260 (262)
T ss_pred HHHHHHh
Confidence 9999875
No 257
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.3e-36 Score=235.91 Aligned_cols=217 Identities=24% Similarity=0.393 Sum_probs=167.7
Q ss_pred CCCCcEEEEEeccc--hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC---------
Q 042809 3 KGTGALFVVKSAES--EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG--------- 66 (241)
Q Consensus 3 ~~~~~~vaiK~~~~--~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~--------- 66 (241)
..++..+++|.+.. ......+.+|+++++.++|+||++ ...+..++|+||+.+++|.+++....
T Consensus 32 ~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~ 111 (280)
T cd05092 32 EQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGG 111 (280)
T ss_pred CCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhccc
Confidence 34677899998763 344567999999999999999988 56678999999999999999998643
Q ss_pred -----CCCCHHHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCc
Q 042809 67 -----GTLDAGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGT 135 (241)
Q Consensus 67 -----~~~~~~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~ 135 (241)
..++...+..++.| +||+.|++|+||+|+||+++.++.++|+|||++....... .........++
T Consensus 112 ~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~----~~~~~~~~~~~ 187 (280)
T cd05092 112 EDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD----YYRVGGRTMLP 187 (280)
T ss_pred ccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCc----eeecCCCcccc
Confidence 23566666665554 4799999999999999999999999999999986432211 00111122346
Q ss_pred ccccCcccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccC
Q 042809 136 QLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERK 214 (241)
Q Consensus 136 ~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 214 (241)
+.|+|||.+.+..++.++|+||||+++|++++ |..||......... ...........+...++.+.+++.+||..+
T Consensus 188 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~li~~cl~~~ 264 (280)
T cd05092 188 IRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAI---ECITQGRELERPRTCPPEVYAIMQGCWQRE 264 (280)
T ss_pred ccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHH---HHHHcCccCCCCCCCCHHHHHHHHHHccCC
Confidence 78999999998889999999999999999998 99999654333222 222223334455667889999999999999
Q ss_pred CCCCCChHHHhc
Q 042809 215 PEKRWSAEELLN 226 (241)
Q Consensus 215 p~~Rps~~~~l~ 226 (241)
|.+||++++++.
T Consensus 265 P~~Rp~~~~l~~ 276 (280)
T cd05092 265 PQQRMVIKDIHS 276 (280)
T ss_pred hhhCCCHHHHHH
Confidence 999999999875
No 258
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.7e-36 Score=238.67 Aligned_cols=220 Identities=32% Similarity=0.467 Sum_probs=170.4
Q ss_pred CCCCCcEEEEEeccc-----hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAES-----EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+|..|++|.+.. ......+.+|+.++..++|||+++ ......|+||||+. ++|.+++.....+++.
T Consensus 42 ~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~l~~ 120 (313)
T cd06633 42 NSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL-GSASDLLEVHKKPLQE 120 (313)
T ss_pred ECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC-CCHHHHHHhcCCCCCH
Confidence 456889999998762 233456889999999999999988 56678999999996 5888888766667777
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||++..... .....++..|+|||.+.
T Consensus 121 ~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~----------~~~~~~~~~y~aPE~~~ 190 (313)
T cd06633 121 VEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP----------ANSFVGTPYWMAPEVIL 190 (313)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCC----------CCCccccccccChhhcc
Confidence 7776665544 7999999999999999999999999999998854321 11234788899999984
Q ss_pred ---ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChH
Q 042809 146 ---NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAE 222 (241)
Q Consensus 146 ---~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 222 (241)
...++.++|+||||+++|++++|..||......... ................+..+.+++.+||+.+|.+||++.
T Consensus 191 ~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~ 268 (313)
T cd06633 191 AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL--YHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASA 268 (313)
T ss_pred ccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH--HHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHH
Confidence 355788999999999999999999998764322221 111111222222334566799999999999999999999
Q ss_pred HHhcCCCCCCCC
Q 042809 223 ELLNHTFISGNA 234 (241)
Q Consensus 223 ~~l~~p~~~~~~ 234 (241)
+++.||||+...
T Consensus 269 ~~l~~~~~~~~~ 280 (313)
T cd06633 269 ELLRHDFVRRDR 280 (313)
T ss_pred HHhcCcccCCCc
Confidence 999999997643
No 259
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=9.6e-37 Score=237.76 Aligned_cols=226 Identities=25% Similarity=0.477 Sum_probs=174.2
Q ss_pred CCCCcEEEEEeccch------HHHHHHHHHHHHHhhcC-CCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 3 KGTGALFVVKSAESE------AGVQALRNEAEIRQSLN-SPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 3 ~~~~~~vaiK~~~~~------~~~~~~~~e~~~l~~l~-h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
..+|..||+|.+... ...+.+.+|+.++.++. |+||+. ..+...|+|+||+++++|.+++... ..++
T Consensus 25 ~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~ 103 (290)
T cd05613 25 HDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQR-ERFK 103 (290)
T ss_pred CCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHHc-CCCC
Confidence 357899999998742 22456788999999995 899987 4567899999999999999999874 5566
Q ss_pred HHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
...+..++. .+||+.|++||||+|+||+++.++.++|+|||++........ .......++..|+|||.+
T Consensus 104 ~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~ 178 (290)
T cd05613 104 EQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV-----ERAYSFCGTIEYMAPDIV 178 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccc-----cccccccCCcccCChhhc
Confidence 666665554 448999999999999999999999999999999875432111 111234578899999998
Q ss_pred ccc--CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC---
Q 042809 145 RNE--GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW--- 219 (241)
Q Consensus 145 ~~~--~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp--- 219 (241)
.+. .++.++|+||||+++|++++|..||....................+..+...+..+.+++++||+.+|.+||
T Consensus 179 ~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~ 258 (290)
T cd05613 179 RGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCG 258 (290)
T ss_pred cCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCCCccCCHHHHHHHHHHhcCCHHHhcCCC
Confidence 753 357789999999999999999999964322222222222222334455666788999999999999999997
Q ss_pred --ChHHHhcCCCCCCCC
Q 042809 220 --SAEELLNHTFISGNA 234 (241)
Q Consensus 220 --s~~~~l~~p~~~~~~ 234 (241)
++++++.||||....
T Consensus 259 ~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 259 PSDADEIKKHPFFQKIN 275 (290)
T ss_pred CCCHHHHHcCcccccCC
Confidence 899999999998765
No 260
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.4e-36 Score=235.26 Aligned_cols=222 Identities=20% Similarity=0.303 Sum_probs=167.9
Q ss_pred CCcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCC---------
Q 042809 5 TGALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGG--------- 67 (241)
Q Consensus 5 ~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~--------- 67 (241)
.+..||+|.+... .....+.+|+..++.++||||++ ......++||||+.+|+|.+++.....
T Consensus 35 ~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~ 114 (288)
T cd05061 35 AETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 114 (288)
T ss_pred cceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCC
Confidence 3568999987632 23345788999999999999988 556689999999999999999976321
Q ss_pred CCCHHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCc
Q 042809 68 TLDAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141 (241)
Q Consensus 68 ~~~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aP 141 (241)
..+...+..++. .+||+++++||||+|+||+++.++.++|+|||++........ ........++..|+||
T Consensus 115 ~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~----~~~~~~~~~~~~y~~p 190 (288)
T cd05061 115 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY----YRKGGKGLLPVRWMAP 190 (288)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCcccccccccc----ccccCCCcccccccCH
Confidence 223333333333 558999999999999999999999999999999864322110 1111122346679999
Q ss_pred ccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCC
Q 042809 142 EVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWS 220 (241)
Q Consensus 142 E~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 220 (241)
|.+.+..++.++|+||||+++|++++ |..||........ ............+...+..+.+++.+||+.+|++|||
T Consensus 191 E~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 267 (288)
T cd05061 191 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV---LKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPT 267 (288)
T ss_pred HHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHH---HHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcC
Confidence 99988889999999999999999998 7889976443332 2222223334455566789999999999999999999
Q ss_pred hHHHhc------CCCCCCC
Q 042809 221 AEELLN------HTFISGN 233 (241)
Q Consensus 221 ~~~~l~------~p~~~~~ 233 (241)
+.++++ ||||++.
T Consensus 268 ~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 268 FLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred HHHHHHHHHhhcCCCCCCC
Confidence 999987 9999864
No 261
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.6e-36 Score=232.51 Aligned_cols=216 Identities=25% Similarity=0.370 Sum_probs=168.0
Q ss_pred CcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc----cCCceeeeeecccCCCCHHHHHHHhC-CCCCHHHHHHH
Q 042809 6 GALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG-GTLDAGVIRLY 77 (241)
Q Consensus 6 ~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~----~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~ 77 (241)
...||+|.+... ...+.+.+|+..+++++||||++ ..+...++|+||+++++|.+++.... ..+++..+..+
T Consensus 23 ~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 102 (257)
T cd05040 23 VIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDY 102 (257)
T ss_pred ceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHH
Confidence 346999998854 34567899999999999999988 22278999999999999999998754 45677777666
Q ss_pred HHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCc
Q 042809 78 TKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDF 151 (241)
Q Consensus 78 ~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ 151 (241)
+.| +||++|++|+||+|+||+++.++.++|+|||++......... ........++..|+|||.+.+..++.
T Consensus 103 ~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~~y~~pE~~~~~~~~~ 179 (257)
T cd05040 103 AVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH---YVMEEHLKVPFAWCAPESLRTRTFSH 179 (257)
T ss_pred HHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccc---eecccCCCCCceecCHHHhcccCcCc
Confidence 554 479999999999999999999999999999998765331110 01111234577899999999888999
Q ss_pred hhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 152 ATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 152 ~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
++|+||||+++|++++ |..||.............. .......+...+..+.+++.+||+.+|++|||+.++++
T Consensus 180 ~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 180 ASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDK--EGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred hhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh--cCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 9999999999999999 9999965433332222221 23333445567789999999999999999999999976
No 262
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-37 Score=257.34 Aligned_cols=217 Identities=26% Similarity=0.382 Sum_probs=170.4
Q ss_pred CCCCcEEEEEecc--chHHHHHHHHHHHHHhhcC-CCcccc-----------cC-CceeeeeecccCCCCHHHHHHHh-C
Q 042809 3 KGTGALFVVKSAE--SEAGVQALRNEAEIRQSLN-SPNIGR-----------NG-EKTVNIFMEYMAGGSLLDVAEKF-G 66 (241)
Q Consensus 3 ~~~~~~vaiK~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~-----------~~-~~~~~lv~e~~~~~~L~~~l~~~-~ 66 (241)
...|..||+|+.- ++...+.+.+|+.+|++|. |+|||. .+ ...+.|+||||.||.|-+++..+ .
T Consensus 59 ~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq 138 (738)
T KOG1989|consen 59 VKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQ 138 (738)
T ss_pred cCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHh
Confidence 4455899999744 5667888999999999998 999987 22 35788999999999999999865 4
Q ss_pred CCCCHHHHHHHHHHH------hhcCC--ccccCCCCCcEEeecCCCeeecCCCcchhhcccccCC---ccccccccccCc
Q 042809 67 GTLDAGVIRLYTKEI------LHGNG--ILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNG---NLKQSWQSIGGT 135 (241)
Q Consensus 67 ~~~~~~~~~~~~~~~------Lh~~~--~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~---~~~~~~~~~~~~ 135 (241)
..+++..++.++.++ ||..+ |+|||||-+|||++.+|.+||||||.++......... .....--...-|
T Consensus 139 ~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TT 218 (738)
T KOG1989|consen 139 TRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTT 218 (738)
T ss_pred ccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCC
Confidence 569999999888866 79888 9999999999999999999999999997543211100 000111122358
Q ss_pred ccccCcccc---cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCC--hhhHHHHHHHHHHh
Q 042809 136 QLWMAPEVL---RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP--TQFFKKVLDFLAKC 210 (241)
Q Consensus 136 ~~~~aPE~~---~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~ 210 (241)
+.|+|||.+ .+...+.++|||||||+||.|+....||.....-.+. ...+.+| +.++..+.+||+.|
T Consensus 219 p~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIl--------ng~Y~~P~~p~ys~~l~~LI~~m 290 (738)
T KOG1989|consen 219 PQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAIL--------NGNYSFPPFPNYSDRLKDLIRTM 290 (738)
T ss_pred ccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEE--------eccccCCCCccHHHHHHHHHHHH
Confidence 999999987 4566789999999999999999999999765332221 2223333 46889999999999
Q ss_pred hccCCCCCCChHHHhcC
Q 042809 211 LERKPEKRWSAEELLNH 227 (241)
Q Consensus 211 l~~~p~~Rps~~~~l~~ 227 (241)
|+.+|.+||++.+++.+
T Consensus 291 L~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 291 LQPNPDERPNIYQVLEE 307 (738)
T ss_pred hccCcccCCCHHHHHHH
Confidence 99999999999998865
No 263
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=9.1e-37 Score=237.67 Aligned_cols=225 Identities=27% Similarity=0.405 Sum_probs=169.0
Q ss_pred CCCCCcEEEEEeccch---HHHHHHHHHHHHHhhcC-CCcccc-----cCCceeeeeecccCCCCHHHHHH---H-hCCC
Q 042809 2 NKGTGALFVVKSAESE---AGVQALRNEAEIRQSLN-SPNIGR-----NGEKTVNIFMEYMAGGSLLDVAE---K-FGGT 68 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~-h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~---~-~~~~ 68 (241)
++.+|+.+|+|.+... .....+.+|+.++.++. |+||++ ..+...+++|||+. ++|.++.. . ....
T Consensus 25 ~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~-~~l~~l~~~~~~~~~~~ 103 (288)
T cd06616 25 HKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMD-ISLDKFYKYVYEVLKSV 103 (288)
T ss_pred ECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEeccc-CCHHHHHHHHHHhhcCC
Confidence 5678999999987632 34567889999999997 999998 55677899999996 46655432 2 2356
Q ss_pred CCHHHHHHHHHH------Hhhc-CCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCc
Q 042809 69 LDAGVIRLYTKE------ILHG-NGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141 (241)
Q Consensus 69 ~~~~~~~~~~~~------~Lh~-~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aP 141 (241)
+++..+..++.+ +||+ .+++||||+|+||+++.++.++|+|||++....... ......+++.|+||
T Consensus 104 l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~~~~y~aP 176 (288)
T cd06616 104 IPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI-------AKTRDAGCRPYMAP 176 (288)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC-------ccccccCccCccCH
Confidence 777776666554 4686 599999999999999999999999999987543311 11123478889999
Q ss_pred cccccc---CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCC----ChhhHHHHHHHHHHhhccC
Q 042809 142 EVLRNE---GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHF----PTQFFKKVLDFLAKCLERK 214 (241)
Q Consensus 142 E~~~~~---~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~ 214 (241)
|.+.+. .++.++|+||+|+++|++++|..||.... ..............+.. +..++..+.+|+.+||+.+
T Consensus 177 E~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~ 254 (288)
T cd06616 177 ERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN--SVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKD 254 (288)
T ss_pred HHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc--hHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCC
Confidence 999766 67899999999999999999999997543 12222222222222222 2346788999999999999
Q ss_pred CCCCCChHHHhcCCCCCCCCcc
Q 042809 215 PEKRWSAEELLNHTFISGNAKK 236 (241)
Q Consensus 215 p~~Rps~~~~l~~p~~~~~~~~ 236 (241)
|.+|||+++++.||||+....+
T Consensus 255 p~~Rpt~~~i~~~~~~~~~~~~ 276 (288)
T cd06616 255 ESKRPKYKELLEHPFIKDYEER 276 (288)
T ss_pred hhhCcCHHHHhcChhhhchhhc
Confidence 9999999999999999775543
No 264
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=2.3e-36 Score=232.82 Aligned_cols=216 Identities=22% Similarity=0.347 Sum_probs=169.6
Q ss_pred CCcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHH
Q 042809 5 TGALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRL 76 (241)
Q Consensus 5 ~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 76 (241)
+...||+|.+.. ......+.+|+.++++++||||++ ...+..++||||+++++|.+++....+.++...+..
T Consensus 31 ~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~ 110 (266)
T cd05033 31 KEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVG 110 (266)
T ss_pred CcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHH
Confidence 456899998763 234566889999999999999988 566789999999999999999987666777877776
Q ss_pred HHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCC
Q 042809 77 YTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLD 150 (241)
Q Consensus 77 ~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~ 150 (241)
++. ++||+.+++|+||+|+||+++.++.++|+|||++......... .......++..|+|||.+.+..++
T Consensus 111 ~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~----~~~~~~~~~~~y~~Pe~~~~~~~~ 186 (266)
T cd05033 111 MLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEAT----YTTKGGKIPIRWTAPEAIAYRKFT 186 (266)
T ss_pred HHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccccc----eeccCCCCCccccChhhhccCCCc
Confidence 665 4489999999999999999999999999999999866421110 001112245679999999988899
Q ss_pred chhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcC
Q 042809 151 FATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227 (241)
Q Consensus 151 ~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 227 (241)
.++|+||||+++|++++ |..||............ ........+...+..+.+++.+||+.+|++||++++++++
T Consensus 187 ~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 187 SASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAV---EDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred cccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHH---HcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 99999999999999998 99999765433332222 2222334455677899999999999999999999999864
No 265
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-38 Score=251.79 Aligned_cols=213 Identities=27% Similarity=0.378 Sum_probs=168.4
Q ss_pred CCCCCcEEEEEeccchHHHHHHHHHHHHHhhcC-CCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHH---
Q 042809 2 NKGTGALFVVKSAESEAGVQALRNEAEIRQSLN-SPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAG--- 72 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~-h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~--- 72 (241)
++.+++..++|++.++ .....+|+.++...+ ||||++ .+..+.|+|||.++|+-|.+.+..........
T Consensus 343 ~~~t~~~~~vkii~~~--~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~~~~~e~~~w 420 (612)
T KOG0603|consen 343 SSPTDQEPAVKIISKR--ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKPEFCSEASQW 420 (612)
T ss_pred ccccccchhheecccc--ccccccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHHHHHHhcchhHHHHHHH
Confidence 5667788888888765 234557777776665 999988 67889999999999988888777633222111
Q ss_pred -HHHHHHHHHhhcCCccccCCCCCcEEe-ecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCC
Q 042809 73 -VIRLYTKEILHGNGILHCDLKCNNVLL-GSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLD 150 (241)
Q Consensus 73 -~~~~~~~~~Lh~~~~vH~dl~p~Nil~-~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~ 150 (241)
..+..+..+||++|+|||||||+||++ ++.|+++|+|||.+...... ....+-|..|.|||.+....++
T Consensus 421 ~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~---------~~tp~~t~~y~APEvl~~~~yt 491 (612)
T KOG0603|consen 421 AAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS---------CDTPALTLQYVAPEVLAIQEYT 491 (612)
T ss_pred HHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh---------hcccchhhcccChhhhccCCCC
Confidence 122233466999999999999999999 68899999999999865542 3334568889999999999999
Q ss_pred chhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 151 FATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 151 ~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
.++|+||||++||+|++|+.||...... ..+. .....+.+...++..+++|+++||+.+|.+|+++.++..||||
T Consensus 492 ~acD~WSLGvlLy~ML~G~tp~~~~P~~--~ei~---~~i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 492 EACDWWSLGVLLYEMLTGRTLFAAHPAG--IEIH---TRIQMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred cchhhHHHHHHHHHHHhCCCccccCCch--HHHH---HhhcCCccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 9999999999999999999999876554 1111 1233344557889999999999999999999999999999999
No 266
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.6e-36 Score=235.07 Aligned_cols=216 Identities=23% Similarity=0.333 Sum_probs=166.8
Q ss_pred CCcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCC------CCC
Q 042809 5 TGALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGG------TLD 70 (241)
Q Consensus 5 ~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~------~~~ 70 (241)
++..|++|.+.. ......+.+|+.+++.++|+||++ ......++||||+.+++|.+++...+. .++
T Consensus 35 ~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~ 114 (277)
T cd05036 35 VELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLT 114 (277)
T ss_pred CceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCC
Confidence 678899998762 233456889999999999999988 556678999999999999999987432 466
Q ss_pred HHHHHHHHHH------HhhcCCccccCCCCCcEEeecCC---CeeecCCCcchhhcccccCCccccccccccCcccccCc
Q 042809 71 AGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHG---DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141 (241)
Q Consensus 71 ~~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aP 141 (241)
+..+..++.| +||+++++|+||+|+||+++.++ .++|+|||++........ .........+..|+||
T Consensus 115 ~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~~~~y~aP 190 (277)
T cd05036 115 MKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASY----YRKGGRAMLPIKWMPP 190 (277)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccc----eecCCCCCccHhhCCH
Confidence 6666665554 47999999999999999998765 589999999875522110 0111112234679999
Q ss_pred ccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCC
Q 042809 142 EVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWS 220 (241)
Q Consensus 142 E~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 220 (241)
|.+.+..++.++||||||+++|++++ |..||...+...... ..........+...+..+.+++.+||+.+|++|||
T Consensus 191 E~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps 267 (277)
T cd05036 191 EAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVME---FVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPN 267 (277)
T ss_pred HHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH---HHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcC
Confidence 99998889999999999999999997 999997654433322 22233444556677889999999999999999999
Q ss_pred hHHHhcC
Q 042809 221 AEELLNH 227 (241)
Q Consensus 221 ~~~~l~~ 227 (241)
++++++|
T Consensus 268 ~~~vl~~ 274 (277)
T cd05036 268 FATILER 274 (277)
T ss_pred HHHHHHH
Confidence 9999986
No 267
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.3e-36 Score=232.88 Aligned_cols=214 Identities=22% Similarity=0.357 Sum_probs=167.2
Q ss_pred CcEEEEEeccch-HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHHH
Q 042809 6 GALFVVKSAESE-AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTK 79 (241)
Q Consensus 6 ~~~vaiK~~~~~-~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 79 (241)
+..+|+|.+... ...+.+.+|+.++++++||||++ ......++||||+.+++|.+++......+++..+..++.
T Consensus 28 ~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~ 107 (256)
T cd05113 28 QYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCK 107 (256)
T ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHH
Confidence 446999987743 23467899999999999999988 455678999999999999999987555678777777766
Q ss_pred HH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCchh
Q 042809 80 EI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFAT 153 (241)
Q Consensus 80 ~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~ 153 (241)
|+ ||+.|++|+||+|+||+++.++.++|+|||.+........ .......++..|+|||.+.+..++.++
T Consensus 108 ~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~-----~~~~~~~~~~~y~~pe~~~~~~~~~~~ 182 (256)
T cd05113 108 DVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY-----TSSVGSKFPVRWSPPEVLLYSKFSSKS 182 (256)
T ss_pred HHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCce-----eecCCCccChhhCCHHHHhcCcccchh
Confidence 54 7999999999999999999999999999998865432111 111122345679999999888899999
Q ss_pred hHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcC
Q 042809 154 DIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227 (241)
Q Consensus 154 Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 227 (241)
|+||||+++|++++ |..||............ ........+...+..+.+++.+||+.+|.+|||+.+++.+
T Consensus 183 Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 183 DVWAFGVLMWEVYSLGKMPYERFNNSETVEKV---SQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred HHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH---hcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 99999999999998 99999764433222222 2223333445567899999999999999999999999864
No 268
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.2e-36 Score=239.98 Aligned_cols=214 Identities=21% Similarity=0.312 Sum_probs=166.5
Q ss_pred cEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHHH
Q 042809 7 ALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTK 79 (241)
Q Consensus 7 ~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 79 (241)
..||+|.+.. ....+.+.+|+.+++.++||||++ ......++|+||+.+|+|.+++......++......++.
T Consensus 37 ~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~ 116 (316)
T cd05108 37 IPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 116 (316)
T ss_pred eeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHH
Confidence 3489999763 344567889999999999999998 234567899999999999999998655677766666555
Q ss_pred H------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCchh
Q 042809 80 E------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFAT 153 (241)
Q Consensus 80 ~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~ 153 (241)
| +||++|++||||||+||+++.++.+||+|||++......... .......++..|+|||.+.+..++.++
T Consensus 117 qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~----~~~~~~~~~~~y~apE~~~~~~~~~~~ 192 (316)
T cd05108 117 QIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKE----YHAEGGKVPIKWMALESILHRIYTHQS 192 (316)
T ss_pred HHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCCcc----eeccCCccceeecChHHhccCCCCchh
Confidence 4 479999999999999999999999999999999765431111 011112235679999999988899999
Q ss_pred hHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcC
Q 042809 154 DIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227 (241)
Q Consensus 154 Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 227 (241)
||||||+++|++++ |..||.+......... .........+...+.++.+++.+||..+|.+|||+.+++.+
T Consensus 193 Di~slGv~l~el~t~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 193 DVWSYGVTVWELMTFGSKPYDGIPASEISSI---LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred hhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH---HhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 99999999999998 9999976543333222 22233334455667889999999999999999999999875
No 269
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.2e-36 Score=237.09 Aligned_cols=225 Identities=29% Similarity=0.506 Sum_probs=171.6
Q ss_pred CCCCcEEEEEeccch------HHHHHHHHHHHHHhhcC-CCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 3 KGTGALFVVKSAESE------AGVQALRNEAEIRQSLN-SPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 3 ~~~~~~vaiK~~~~~------~~~~~~~~e~~~l~~l~-h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
..+++.||+|.+... ...+.+.+|+.++.+++ ||||++ ..+...++||||+.+++|.+++... ..++
T Consensus 25 ~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~ 103 (288)
T cd05583 25 HDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQR-EHFT 103 (288)
T ss_pred ccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhhc-CCcC
Confidence 457889999987642 23456789999999995 999988 5667899999999999999998863 4566
Q ss_pred HHHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
...+..++.| +||+.|++|+||+|+||+++.++.++|+|||++........ .......++..|+|||.+
T Consensus 104 ~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~ 178 (288)
T cd05583 104 ESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEE-----ERAYSFCGTIEYMAPEVI 178 (288)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccccc-----cccccccCCccccCHHHh
Confidence 7666655554 47999999999999999999999999999998865432111 011123478899999998
Q ss_pred cccC--CCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCC--
Q 042809 145 RNEG--LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWS-- 220 (241)
Q Consensus 145 ~~~~--~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps-- 220 (241)
.+.. .+.++|+||||+++|++++|..||....................+..+...+..+.+++.+||+.+|++|||
T Consensus 179 ~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~ 258 (288)
T cd05583 179 RGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKTMSAEARDFIQKLLEKDPKKRLGAN 258 (288)
T ss_pred cCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCCCCcccCHHHHHHHHHHhcCCHhhccCcc
Confidence 7655 678999999999999999999999643222211122222223334556667789999999999999999998
Q ss_pred -hHHHhcCCCCCCC
Q 042809 221 -AEELLNHTFISGN 233 (241)
Q Consensus 221 -~~~~l~~p~~~~~ 233 (241)
+.++++||||+..
T Consensus 259 ~~~~~l~~~~~~~~ 272 (288)
T cd05583 259 GADEIKNHPFFQGI 272 (288)
T ss_pred hHHHHhcCcccccC
Confidence 5677999999764
No 270
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-38 Score=224.30 Aligned_cols=224 Identities=27% Similarity=0.424 Sum_probs=169.1
Q ss_pred CCCCcEEEEEecc--chHHHHHHHHHHHHHhhcCCCcccc----------cCCceeeeeecccCCCCHHHHHHHh---CC
Q 042809 3 KGTGALFVVKSAE--SEAGVQALRNEAEIRQSLNSPNIGR----------NGEKTVNIFMEYMAGGSLLDVAEKF---GG 67 (241)
Q Consensus 3 ~~~~~~vaiK~~~--~~~~~~~~~~e~~~l~~l~h~~i~~----------~~~~~~~lv~e~~~~~~L~~~l~~~---~~ 67 (241)
..|++.||+|++. +....+...+|++..++++|||+++ +.....|++++|...|+|.+.+... +.
T Consensus 43 ~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~ 122 (302)
T KOG2345|consen 43 LSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGN 122 (302)
T ss_pred cCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCC
Confidence 4678999999866 3456788999999999999999987 4566799999999999999988764 45
Q ss_pred CCCHHHHHHHHHHH------hhcCC--ccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccc---cccccccCcc
Q 042809 68 TLDAGVIRLYTKEI------LHGNG--ILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLK---QSWQSIGGTQ 136 (241)
Q Consensus 68 ~~~~~~~~~~~~~~------Lh~~~--~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~---~~~~~~~~~~ 136 (241)
.++++.+..++.++ ||+.. +.||||||.||+++..+.+++.|||.+....-...+.... .......-|.
T Consensus 123 ~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~ 202 (302)
T KOG2345|consen 123 FVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTI 202 (302)
T ss_pred ccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCC
Confidence 78999998888765 79988 9999999999999999999999999997653211111111 1222333578
Q ss_pred cccCcccccc---cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHH-HHhcCCCCCCChhhHHHHHHHHHHhhc
Q 042809 137 LWMAPEVLRN---EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLK-IACSNEKPHFPTQFFKKVLDFLAKCLE 212 (241)
Q Consensus 137 ~~~aPE~~~~---~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~ 212 (241)
.|+|||.+.- ...+.++|||||||++|.|+.|..||...........+. .......|. ...+++.+.++|+.||+
T Consensus 203 pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~-~~~yse~l~~lik~mlq 281 (302)
T KOG2345|consen 203 PYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPN-SSRYSEALHQLIKSMLQ 281 (302)
T ss_pred cccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCC-CCCccHHHHHHHHHHhc
Confidence 8999999964 345689999999999999999999995422211110000 000011111 22378899999999999
Q ss_pred cCCCCCCChHHHhcC
Q 042809 213 RKPEKRWSAEELLNH 227 (241)
Q Consensus 213 ~~p~~Rps~~~~l~~ 227 (241)
.||.+||++.+++.+
T Consensus 282 vdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 282 VDPNQRPTIPELLSK 296 (302)
T ss_pred CCcccCCCHHHHHHH
Confidence 999999999999864
No 271
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.8e-36 Score=232.74 Aligned_cols=214 Identities=23% Similarity=0.349 Sum_probs=167.3
Q ss_pred CCcEEEEEeccch-HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC-CCCCHHHHHHH
Q 042809 5 TGALFVVKSAESE-AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG-GTLDAGVIRLY 77 (241)
Q Consensus 5 ~~~~vaiK~~~~~-~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~ 77 (241)
+++.||+|.+... ...+.+.+|+.++++++||||++ ...+..++||||+.+++|.+++.... ..++...+..+
T Consensus 29 ~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ 108 (261)
T cd05068 29 NTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDM 108 (261)
T ss_pred CCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHH
Confidence 4567999988743 33567889999999999999987 56678999999999999999998643 45777777666
Q ss_pred HHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCc
Q 042809 78 TKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDF 151 (241)
Q Consensus 78 ~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ 151 (241)
+.++ ||+.|++|+||+|+||+++.++.++|+|||++......... .......+..|+|||.+.+..++.
T Consensus 109 ~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~ 183 (261)
T cd05068 109 AAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE-----AREGAKFPIKWTAPEAALYNRFSI 183 (261)
T ss_pred HHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCccc-----ccCCCcCceeccCccccccCCCCc
Confidence 6554 79999999999999999999999999999998765421110 011112245799999999888999
Q ss_pred hhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 152 ATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 152 ~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
++|+||||+++|++++ |+.||.+........ ..........+...+..+.+++.+||+.+|.+||++.+++.
T Consensus 184 ~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 184 KSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQ---QVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred hhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHH---HHHcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 9999999999999999 999997654333222 22222333445667789999999999999999999999875
No 272
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.3e-36 Score=241.60 Aligned_cols=233 Identities=24% Similarity=0.326 Sum_probs=171.8
Q ss_pred CCCCCcEEEEEeccchHHH----------------HHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHH
Q 042809 2 NKGTGALFVVKSAESEAGV----------------QALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLD 60 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~~~----------------~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~ 60 (241)
|+.+|+.||+|.+...... ..+.+|+++++.++|+||++ ...+..++||||+. ++|.+
T Consensus 30 ~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~ 108 (335)
T PTZ00024 30 DTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGDFINLVMDIMA-SDLKK 108 (335)
T ss_pred ECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCCcEEEEEeccc-cCHHH
Confidence 5678999999987643211 14778999999999999988 56778999999996 69999
Q ss_pred HHHHhCCCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCC--------ccc
Q 042809 61 VAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNG--------NLK 126 (241)
Q Consensus 61 ~l~~~~~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~--------~~~ 126 (241)
++.. ...++......++.|+ ||+.|++|+||+|+||+++.++.++|+|||++.......... ...
T Consensus 109 ~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ 187 (335)
T PTZ00024 109 VVDR-KIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRR 187 (335)
T ss_pred HHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccceeeccccccccccccccccccc
Confidence 9876 4557777776666654 799999999999999999999999999999987654211000 001
Q ss_pred cccccccCcccccCccccccc-CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCC------------
Q 042809 127 QSWQSIGGTQLWMAPEVLRNE-GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP------------ 193 (241)
Q Consensus 127 ~~~~~~~~~~~~~aPE~~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~------------ 193 (241)
.......+++.|+|||.+.+. .++.++|+||||+++|++++|..||.....................
T Consensus 188 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 267 (335)
T PTZ00024 188 EEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLY 267 (335)
T ss_pred ccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccc
Confidence 111223457789999998764 3688999999999999999999999765433222211111100000
Q ss_pred ------------CCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCcc
Q 042809 194 ------------HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKK 236 (241)
Q Consensus 194 ------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~~ 236 (241)
......+..+.+++.+||+.+|.+|||+++++.||||+.....
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~~ 322 (335)
T PTZ00024 268 TEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPLP 322 (335)
T ss_pred cccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCCCC
Confidence 0012235678999999999999999999999999999876553
No 273
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=5.7e-37 Score=243.24 Aligned_cols=229 Identities=27% Similarity=0.366 Sum_probs=173.1
Q ss_pred CCCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCcccc-----cCC-----ceeeeeecccCCCCHHHHHHHhCC
Q 042809 2 NKGTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGR-----NGE-----KTVNIFMEYMAGGSLLDVAEKFGG 67 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~-----~~~~lv~e~~~~~~L~~~l~~~~~ 67 (241)
+..+|+.+|+|.+.. ....+.+.+|+.+++.++|+||++ ... ...|+||||+. ++|.+++... .
T Consensus 21 ~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~-~ 98 (330)
T cd07834 21 DKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELME-TDLHKVIKSP-Q 98 (330)
T ss_pred eCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchh-hhHHHHHhCC-C
Confidence 456789999998764 334567899999999999999987 222 37899999997 5899988763 4
Q ss_pred CCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCc
Q 042809 68 TLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141 (241)
Q Consensus 68 ~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aP 141 (241)
.+++..+..++.++ ||+.|++|+||+|+||+++.++.++|+|||.+......... ........++..|+||
T Consensus 99 ~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~---~~~~~~~~~~~~y~aP 175 (330)
T cd07834 99 PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE---KGFLTEYVVTRWYRAP 175 (330)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccc---cccccccccccCcCCc
Confidence 77777777666654 79999999999999999999999999999999865442211 0112233468889999
Q ss_pred cccccc-CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCC---------------------------
Q 042809 142 EVLRNE-GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP--------------------------- 193 (241)
Q Consensus 142 E~~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------- 193 (241)
|.+.+. .++.++|+||+|+++|++++|..||....................+
T Consensus 176 E~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (330)
T cd07834 176 ELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLS 255 (330)
T ss_pred eeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhH
Confidence 999887 7889999999999999999999999765432222111111100000
Q ss_pred CCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCc
Q 042809 194 HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAK 235 (241)
Q Consensus 194 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~ 235 (241)
......+..+.+++++||+.+|.+|||++++++||||+....
T Consensus 256 ~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 256 KLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred HhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 011224678999999999999999999999999999976544
No 274
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.7e-36 Score=235.71 Aligned_cols=223 Identities=24% Similarity=0.400 Sum_probs=166.9
Q ss_pred CCCCCcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc-------cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR-------NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~-------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.++..||+|.+.. ......+.+|+.+++.++|||+++ .+....++||||++|++|.+++......++.
T Consensus 29 ~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~ 108 (284)
T cd05079 29 GDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINL 108 (284)
T ss_pred CCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCH
Confidence 356789999999773 334567899999999999999987 2246789999999999999999875555677
Q ss_pred HHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++.+ +||++|++||||+|+||+++.++.++|+|||++......... ........++..|+|||.+.
T Consensus 109 ~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~~y~apE~~~ 185 (284)
T cd05079 109 KQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEY---YTVKDDLDSPVFWYAPECLI 185 (284)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCccc---eeecCCCCCCccccCHHHhc
Confidence 766666554 479999999999999999999999999999998755331111 01112344667899999998
Q ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCccchh------------chHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhcc
Q 042809 146 NEGLDFATDIWSLGCMVIEMATGRPPWGDKIS------------NAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLER 213 (241)
Q Consensus 146 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 213 (241)
+..++.++|+||||+++|+++++..|...... ..................+...+..+.+|+.+||+.
T Consensus 186 ~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 265 (284)
T cd05079 186 QSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEF 265 (284)
T ss_pred cCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccC
Confidence 88889999999999999999997765422110 011111111112223334556778999999999999
Q ss_pred CCCCCCChHHHhcC
Q 042809 214 KPEKRWSAEELLNH 227 (241)
Q Consensus 214 ~p~~Rps~~~~l~~ 227 (241)
+|.+|||+++++..
T Consensus 266 ~p~~Rpt~~~il~~ 279 (284)
T cd05079 266 QPSKRTTFQNLIEG 279 (284)
T ss_pred CcccCcCHHHHHHH
Confidence 99999999999864
No 275
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.1e-36 Score=236.44 Aligned_cols=222 Identities=27% Similarity=0.447 Sum_probs=171.0
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHH
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAG 72 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 72 (241)
++.+|+.+++|.+... .....+.+|+.++++++|+||++ ..+...++|+||+.+ +|.+++......++..
T Consensus 20 ~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~ 98 (283)
T cd05118 20 DKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT-DLYKLIKDRQRGLPES 98 (283)
T ss_pred cCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC-CHHHHHHhhcccCCHH
Confidence 5678999999987633 23467889999999999999988 567889999999974 8998888755677777
Q ss_pred HHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 73 VIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 73 ~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
.+..++.++ ||+.+++|+||+|+||+++.++.++|+|||.+....... .......++..|+|||.+.+
T Consensus 99 ~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~------~~~~~~~~~~~~~~PE~~~~ 172 (283)
T cd05118 99 LIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV------RPYTHYVVTRWYRAPELLLG 172 (283)
T ss_pred HHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc------ccccCccCcccccCcHHHhc
Confidence 777666654 799999999999999999999999999999987554321 11122346788999999877
Q ss_pred c-CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCC--------------------------CCCChhh
Q 042809 147 E-GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEK--------------------------PHFPTQF 199 (241)
Q Consensus 147 ~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~ 199 (241)
. ..+.++|+||+|+++|++++|+.||.................... .......
T Consensus 173 ~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (283)
T cd05118 173 DKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNA 252 (283)
T ss_pred CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhh
Confidence 6 678999999999999999999999965433221111111000000 0112245
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 200 FKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 200 ~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
+..+.++|.+||+.+|.+||++.+++.||||
T Consensus 253 ~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 253 SPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred CHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 6789999999999999999999999999997
No 276
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.7e-36 Score=236.47 Aligned_cols=218 Identities=24% Similarity=0.329 Sum_probs=167.8
Q ss_pred CCCCcEEEEEeccc---hHHHHHHHHHHHHHhhc-CCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC-CCCCHH
Q 042809 3 KGTGALFVVKSAES---EAGVQALRNEAEIRQSL-NSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG-GTLDAG 72 (241)
Q Consensus 3 ~~~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~ 72 (241)
..++..+|+|.+.. ....+.+.+|+.+++++ +||||++ ...+..++|+||+.+++|.+++.... ..++..
T Consensus 62 ~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~ 141 (302)
T cd05055 62 SDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLE 141 (302)
T ss_pred CCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHH
Confidence 34567899998763 33456789999999999 7999998 56678999999999999999998643 236777
Q ss_pred HHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 73 VIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 73 ~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
....++.+ +||+++++|+||+|+||+++.++.++++|||++........ ........++..|+|||.+.+
T Consensus 142 ~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~ 217 (302)
T cd05055 142 DLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSN----YVVKGNARLPVKWMAPESIFN 217 (302)
T ss_pred HHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccccCCCc----eeecCCCCcccccCCHhhhcc
Confidence 76666554 47999999999999999999999999999999875433111 001112335678999999988
Q ss_pred cCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHh
Q 042809 147 EGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225 (241)
Q Consensus 147 ~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l 225 (241)
..++.++||||+|+++|++++ |..||........ .............+...+..+.+++.+||+.+|.+|||+.+++
T Consensus 218 ~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell 295 (302)
T cd05055 218 CVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK--FYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIV 295 (302)
T ss_pred CCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH--HHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence 889999999999999999998 9999876433222 1122222333344455678999999999999999999999997
Q ss_pred c
Q 042809 226 N 226 (241)
Q Consensus 226 ~ 226 (241)
.
T Consensus 296 ~ 296 (302)
T cd05055 296 Q 296 (302)
T ss_pred H
Confidence 5
No 277
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=9e-37 Score=238.37 Aligned_cols=227 Identities=23% Similarity=0.329 Sum_probs=166.3
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCC-CCCH
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGG-TLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~ 71 (241)
++.+|+.||+|.+... ...+.+.+|++++++++||||++ ......++||||++ ++|.+++..... .++.
T Consensus 23 ~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~ 101 (294)
T PLN00009 23 DRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD-LDLKKHMDSSPDFAKNP 101 (294)
T ss_pred ecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEeccc-ccHHHHHHhCCCCCcCH
Confidence 4678999999987632 23456889999999999999988 66789999999996 588888765432 2455
Q ss_pred HHHHHHHH------HHhhcCCccccCCCCCcEEeec-CCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 72 GVIRLYTK------EILHGNGILHCDLKCNNVLLGS-HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 72 ~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
..+..++. ++||+++++|+||+|+||+++. ++.+||+|||++....... .......+++.|+|||.+
T Consensus 102 ~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~------~~~~~~~~~~~y~~PE~~ 175 (294)
T PLN00009 102 RLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV------RTFTHEVVTLWYRAPEIL 175 (294)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc------cccccCceeecccCHHHH
Confidence 55544444 4589999999999999999985 4579999999986543211 111223467889999998
Q ss_pred ccc-CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCC-----------------CCC--------CChh
Q 042809 145 RNE-GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNE-----------------KPH--------FPTQ 198 (241)
Q Consensus 145 ~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-----------------~~~--------~~~~ 198 (241)
.+. .++.++|+||+|+++|++++|..||...+............... .+. ..+.
T Consensus 176 ~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (294)
T PLN00009 176 LGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPT 255 (294)
T ss_pred hCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcC
Confidence 664 46889999999999999999999997643322211111000000 000 1133
Q ss_pred hHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCc
Q 042809 199 FFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAK 235 (241)
Q Consensus 199 ~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~ 235 (241)
.+..+.+++.+||+.+|.+||++.++++||||.+-..
T Consensus 256 ~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~~ 292 (294)
T PLN00009 256 LEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLGD 292 (294)
T ss_pred CChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHhc
Confidence 5678899999999999999999999999999987543
No 278
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.2e-36 Score=234.89 Aligned_cols=217 Identities=21% Similarity=0.314 Sum_probs=166.7
Q ss_pred CCCcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHh----------
Q 042809 4 GTGALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF---------- 65 (241)
Q Consensus 4 ~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~---------- 65 (241)
.+++.||+|.+... .....+.+|+.++..++||||++ ......++++||+.+++|.+++...
T Consensus 33 ~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~ 112 (283)
T cd05091 33 EQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTD 112 (283)
T ss_pred CceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccc
Confidence 35688999998743 23466889999999999999988 5567799999999999999998642
Q ss_pred -----CCCCCHHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccC
Q 042809 66 -----GGTLDAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGG 134 (241)
Q Consensus 66 -----~~~~~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ 134 (241)
...++...+..++. ++||+.|++||||||+||+++.++.+||+|||++........ ........+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~~ 188 (283)
T cd05091 113 DDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADY----YKLMGNSLL 188 (283)
T ss_pred cccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEecccccccccccchh----eeeccCccC
Confidence 12355555554444 458999999999999999999999999999999875432111 111122335
Q ss_pred cccccCcccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhcc
Q 042809 135 TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLER 213 (241)
Q Consensus 135 ~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 213 (241)
++.|+|||.+.+..++.++|+||||+++|++++ |..||.+....... ...........+...+..+.+++.+||+.
T Consensus 189 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~li~~cl~~ 265 (283)
T cd05091 189 PIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVI---EMIRNRQVLPCPDDCPAWVYTLMLECWNE 265 (283)
T ss_pred CccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHH---HHHHcCCcCCCCCCCCHHHHHHHHHHhCC
Confidence 678999999988889999999999999999998 88898765443322 22222333445667888999999999999
Q ss_pred CCCCCCChHHHhcC
Q 042809 214 KPEKRWSAEELLNH 227 (241)
Q Consensus 214 ~p~~Rps~~~~l~~ 227 (241)
+|.+||++++++..
T Consensus 266 ~p~~RP~~~~i~~~ 279 (283)
T cd05091 266 FPSRRPRFKDIHSR 279 (283)
T ss_pred CcccCCCHHHHHHH
Confidence 99999999999864
No 279
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.5e-36 Score=231.44 Aligned_cols=215 Identities=23% Similarity=0.361 Sum_probs=168.0
Q ss_pred CCcEEEEEeccchH---HHHHHHHHHHHHhhcCCCcccc----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHH
Q 042809 5 TGALFVVKSAESEA---GVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY 77 (241)
Q Consensus 5 ~~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~h~~i~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 77 (241)
++..+|+|.+..+. ..+.+.+|+.+++.+.|+||++ ......++||||+++++|.+++... ..+++..+..+
T Consensus 22 ~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~ 100 (257)
T cd05060 22 KEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLGPLLKYLKKR-REIPVSDLKEL 100 (257)
T ss_pred CcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCCcHHHHHHhC-CCCCHHHHHHH
Confidence 44789999977433 4567899999999999999988 4455789999999999999999874 36777777666
Q ss_pred HHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCc
Q 042809 78 TKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDF 151 (241)
Q Consensus 78 ~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ 151 (241)
+.|+ ||..+++|+||+|+||+++.++.++|+|||.+........ .........++..|+|||.+.+..++.
T Consensus 101 ~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~ 177 (257)
T cd05060 101 AHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSD---YYRATTAGRWPLKWYAPECINYGKFSS 177 (257)
T ss_pred HHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCc---ccccccCccccccccCHHHhcCCCCCc
Confidence 6654 7999999999999999999999999999999875533111 111111112345799999999888999
Q ss_pred hhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 152 ATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 152 ~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
++|+||||+++|++++ |..||......... ...........+...+..+.+++.+||..+|++|||+.++++
T Consensus 178 ~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 178 KSDVWSYGVTLWEAFSYGAKPYGEMKGAEVI---AMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred cchHHHHHHHHHHHHcCCCCCcccCCHHHHH---HHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 9999999999999998 99999765433322 222233344556667789999999999999999999999875
No 280
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.6e-36 Score=233.07 Aligned_cols=212 Identities=22% Similarity=0.310 Sum_probs=168.4
Q ss_pred CcEEEEEeccchH--HHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHh-CCCCCHHHHHHH
Q 042809 6 GALFVVKSAESEA--GVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF-GGTLDAGVIRLY 77 (241)
Q Consensus 6 ~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~ 77 (241)
+..+++|.+.... ....+.+|+.+++.++|+||++ ......++||||+++++|.+++... +..++...+..+
T Consensus 30 ~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ 109 (261)
T cd05148 30 RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDM 109 (261)
T ss_pred CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHH
Confidence 7889999987543 3567899999999999999988 5667899999999999999999864 345676666665
Q ss_pred HH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCc
Q 042809 78 TK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDF 151 (241)
Q Consensus 78 ~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ 151 (241)
+. ++||+.|++|+||+|+||+++.++.++|+|||.+......... .....++..|+|||.+.+..++.
T Consensus 110 ~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~------~~~~~~~~~~~~PE~~~~~~~~~ 183 (261)
T cd05148 110 ACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL------SSDKKIPYKWTAPEAASHGTFST 183 (261)
T ss_pred HHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCcccc------ccCCCCceEecCHHHHccCCCCc
Confidence 54 4479999999999999999999999999999999765331111 11223466799999998888899
Q ss_pred hhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 152 ATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 152 ~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
++|+||||+++|++++ |..||........... .........+...+..+.+++.+||+.+|.+|||+.++++
T Consensus 184 ~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 184 KSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQ---ITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred hhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHH---HHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 9999999999999998 8999976543322222 2233444556677889999999999999999999999875
No 281
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.1e-36 Score=242.16 Aligned_cols=225 Identities=24% Similarity=0.340 Sum_probs=168.9
Q ss_pred CCCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCccccc----------CCceeeeeecccCCCCHHHHHHHhCC
Q 042809 2 NKGTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGRN----------GEKTVNIFMEYMAGGSLLDVAEKFGG 67 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~----------~~~~~~lv~e~~~~~~L~~~l~~~~~ 67 (241)
++.+|+.||+|.+.. ......+.+|+.+++.++|+||++. .....|+|+||+. ++|.+++.. ..
T Consensus 26 ~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~ 103 (337)
T cd07858 26 NSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMD-TDLHQIIRS-SQ 103 (337)
T ss_pred ecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCC-CCHHHHHhc-CC
Confidence 567899999998763 2334567889999999999999871 1145899999995 699998876 45
Q ss_pred CCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCc
Q 042809 68 TLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141 (241)
Q Consensus 68 ~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aP 141 (241)
.+++..+..++.|+ ||+++++|+||+|+||+++.++.++|+|||++....... .......++..|+||
T Consensus 104 ~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~------~~~~~~~~~~~y~aP 177 (337)
T cd07858 104 TLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG------DFMTEYVVTRWYRAP 177 (337)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCc------ccccccccccCccCh
Confidence 67887777776655 799999999999999999999999999999987543311 111223467889999
Q ss_pred ccccc-cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhc----------------------CCC--C---
Q 042809 142 EVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACS----------------------NEK--P--- 193 (241)
Q Consensus 142 E~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~----------------------~~~--~--- 193 (241)
|.+.. ..++.++|+||||+++|++++|..||.+............... ... .
T Consensus 178 E~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (337)
T cd07858 178 ELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFA 257 (337)
T ss_pred HHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHH
Confidence 98864 4578899999999999999999999965432111111110000 000 0
Q ss_pred CCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCC
Q 042809 194 HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNA 234 (241)
Q Consensus 194 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~ 234 (241)
......+.++.+++++||+.+|.+|||++++++||||....
T Consensus 258 ~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~ 298 (337)
T cd07858 258 RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH 298 (337)
T ss_pred HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence 01234567899999999999999999999999999997643
No 282
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=7e-38 Score=249.66 Aligned_cols=214 Identities=25% Similarity=0.381 Sum_probs=171.5
Q ss_pred cEEEEEecc----chHHHHHHHHHHHHHhhcCCCcccc----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHH
Q 042809 7 ALFVVKSAE----SEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYT 78 (241)
Q Consensus 7 ~~vaiK~~~----~~~~~~~~~~e~~~l~~l~h~~i~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 78 (241)
..||||+++ .+...+.|.+|+..+++-+|.||+- -....+.||+-||+|.+|+.++......++......++
T Consensus 415 GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIA 494 (678)
T KOG0193|consen 415 GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIA 494 (678)
T ss_pred cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCceeeeehhccCchhhhhccchhhhhhHHHHHHHH
Confidence 358999977 3456888999999999999999986 34444599999999999999999877888888888888
Q ss_pred HHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc---ccCC
Q 042809 79 KEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR---NEGL 149 (241)
Q Consensus 79 ~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~---~~~~ 149 (241)
+|+ ||.++|+|+|||..|||+.++++|||+|||++.....+... .......|+..|+|||++. ..+|
T Consensus 495 qQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~----~q~~qp~gsilwmAPEvIRmqd~nPf 570 (678)
T KOG0193|consen 495 QQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGE----QQLEQPHGSLLWMAPEVIRMQDDNPF 570 (678)
T ss_pred HHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeeeccc----cccCCCccchhhhcHHHHhhcccCCC
Confidence 866 89999999999999999999999999999999876554222 2234456889999999985 4678
Q ss_pred CchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCC---ChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 150 DFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHF---PTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 150 ~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
++.+||||||+++|||++|..||.....+.+ +.........++. ....+.++.+|+..||.+++++||++.+++.
T Consensus 571 S~qSDVYaFGiV~YELltg~lPysi~~~dqI--ifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 571 SFQSDVYAFGIVWYELLTGELPYSIQNRDQI--IFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred CcccchhhhhHHHHHHHhCcCCcCCCChhhe--EEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 9999999999999999999999985322221 1111111112222 2345678999999999999999999999886
No 283
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=3.4e-36 Score=231.87 Aligned_cols=218 Identities=28% Similarity=0.484 Sum_probs=168.6
Q ss_pred CCCCCcEEEEEeccc-----hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHh---CCC
Q 042809 2 NKGTGALFVVKSAES-----EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF---GGT 68 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~---~~~ 68 (241)
++.+|+.||+|.+.. ....+.+.+|++++++++|+|+++ ..++..++||||+++++|.+++... +..
T Consensus 23 ~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 102 (267)
T cd08224 23 CLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRL 102 (267)
T ss_pred EcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCC
Confidence 346899999998652 233567899999999999999987 5667899999999999999998753 344
Q ss_pred CCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcc
Q 042809 69 LDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPE 142 (241)
Q Consensus 69 ~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE 142 (241)
++...+..++.++ ||+.|++|+||+|+||+++.++.++|+|||++........ ......++..|.|||
T Consensus 103 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~------~~~~~~~~~~y~apE 176 (267)
T cd08224 103 IPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT------AAHSLVGTPYYMSPE 176 (267)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCc------ccceecCCccccCHH
Confidence 6666666655544 7999999999999999999999999999999865432111 112234788899999
Q ss_pred cccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCCh-hhHHHHHHHHHHhhccCCCCCCCh
Q 042809 143 VLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPT-QFFKKVLDFLAKCLERKPEKRWSA 221 (241)
Q Consensus 143 ~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~p~~Rps~ 221 (241)
.+.+..++.++|+||||+++|++++|..||...... .............+..+. ..+..+.+++.+||..+|.+|||+
T Consensus 177 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~ 255 (267)
T cd08224 177 RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDI 255 (267)
T ss_pred HhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc-HHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCH
Confidence 999888999999999999999999999999654322 112222222223333444 677789999999999999999999
Q ss_pred HHHhc
Q 042809 222 EELLN 226 (241)
Q Consensus 222 ~~~l~ 226 (241)
.++++
T Consensus 256 ~~il~ 260 (267)
T cd08224 256 SYVLQ 260 (267)
T ss_pred HHHHH
Confidence 99874
No 284
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=4.5e-36 Score=236.74 Aligned_cols=222 Identities=31% Similarity=0.446 Sum_probs=172.3
Q ss_pred CCCCCcEEEEEeccc-----hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAES-----EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+|..+|+|.+.. ......+.+|++++++++|||+++ ..+...++|+||+. |+|.+++.....++++
T Consensus 46 ~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~~~~~l~~ 124 (317)
T cd06635 46 DVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQE 124 (317)
T ss_pred EcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCC-CCHHHHHHHhcCCCCH
Confidence 456789999998762 233457889999999999999988 56678999999997 5888888766667777
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++.++ ||+.|++|+||+|+||+++.++.++|+|||++..... .....++..|+|||.+.
T Consensus 125 ~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~----------~~~~~~~~~y~aPE~~~ 194 (317)
T cd06635 125 VEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP----------ANSFVGTPYWMAPEVIL 194 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC----------cccccCCccccChhhhh
Confidence 7776665544 7999999999999999999999999999998864322 11234788899999974
Q ss_pred ---ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChH
Q 042809 146 ---NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAE 222 (241)
Q Consensus 146 ---~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 222 (241)
...++.++|+||||+++|++++|..||.......... ...............+..+.+++.+||+.+|.+||++.
T Consensus 195 ~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~ 272 (317)
T cd06635 195 AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY--HIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSE 272 (317)
T ss_pred cCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHH--HHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCHH
Confidence 4557889999999999999999999987643222211 11111222223345667899999999999999999999
Q ss_pred HHhcCCCCCCCCcc
Q 042809 223 ELLNHTFISGNAKK 236 (241)
Q Consensus 223 ~~l~~p~~~~~~~~ 236 (241)
++++|+|+.....+
T Consensus 273 ~il~~~~~~~~~~~ 286 (317)
T cd06635 273 ELLKHMFVLRERPE 286 (317)
T ss_pred HHHhChhhhccCcc
Confidence 99999998665543
No 285
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-37 Score=247.34 Aligned_cols=210 Identities=25% Similarity=0.393 Sum_probs=171.3
Q ss_pred EEEEeccc-----hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHH
Q 042809 9 FVVKSAES-----EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYT 78 (241)
Q Consensus 9 vaiK~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 78 (241)
||+|.... ......+.+|+++|++++|||||+ .....+++|||+|+||+|.++|+..+..++......++
T Consensus 189 VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~ 268 (474)
T KOG0194|consen 189 VAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFC 268 (474)
T ss_pred eEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHH
Confidence 89998773 456788999999999999999998 67889999999999999999999976667777776666
Q ss_pred H------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCch
Q 042809 79 K------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFA 152 (241)
Q Consensus 79 ~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~ 152 (241)
. +|||+++++||||-.+|||++.++.+||+|||++.......... ....-+..|+|||.+..+.|+.+
T Consensus 269 ~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~------~~~klPirWLAPEtl~~~~~s~k 342 (474)
T KOG0194|consen 269 YDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKK------FLKKLPIRWLAPETLNTGIFSFK 342 (474)
T ss_pred HHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCcceeecc------ccccCcceecChhhhccCccccc
Confidence 5 56999999999999999999999999999999986443111000 01124678999999999999999
Q ss_pred hhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 153 TDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 153 ~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
+||||||+++||+++ |..||.+.........+ ...+.+...+...+..+..++.+||..+|.+|||+.++.+
T Consensus 343 TDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI--~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 343 TDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKI--VKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred cchhheeeeEEeeeccCCCCCCCCCHHHHHHHH--HhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 999999999999999 88999876544332222 2334455566678889999999999999999999998764
No 286
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.8e-36 Score=236.74 Aligned_cols=223 Identities=28% Similarity=0.386 Sum_probs=162.9
Q ss_pred CCCCCcEEEEEeccchH----HHHHHHHHHHHHhhcC-CCcccc-----cC-----CceeeeeecccCCCCHHHHHHHhC
Q 042809 2 NKGTGALFVVKSAESEA----GVQALRNEAEIRQSLN-SPNIGR-----NG-----EKTVNIFMEYMAGGSLLDVAEKFG 66 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~-----~~-----~~~~~lv~e~~~~~~L~~~l~~~~ 66 (241)
++.+|+.||+|...... ....+.+|+.+++.+. ||||++ .. ....|+||||+++ +|.+++....
T Consensus 22 ~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~ 100 (295)
T cd07837 22 DKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNG 100 (295)
T ss_pred ECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhc
Confidence 46789999999876432 2356888999999996 699987 12 2238999999975 8988886532
Q ss_pred ----CCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeec-CCCeeecCCCcchhhcccccCCccccccccccCc
Q 042809 67 ----GTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGS-HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGT 135 (241)
Q Consensus 67 ----~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~ 135 (241)
..+++..+..++.|+ ||++|++||||+|+||+++. ++.++|+|||++....... .......++
T Consensus 101 ~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~------~~~~~~~~~ 174 (295)
T cd07837 101 RGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPV------KSYTHEIVT 174 (295)
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccceecCCCc------cccCCcccc
Confidence 346777777666644 79999999999999999998 8899999999986442210 111122457
Q ss_pred ccccCcccccc-cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcC-C---------------CC-----
Q 042809 136 QLWMAPEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN-E---------------KP----- 193 (241)
Q Consensus 136 ~~~~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~---------------~~----- 193 (241)
+.|+|||.+.+ ..++.++|+||||+++|++++|..||.+................ . .+
T Consensus 175 ~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (295)
T cd07837 175 LWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQ 254 (295)
T ss_pred cCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccch
Confidence 78999998865 45688999999999999999999999764322211111100000 0 00
Q ss_pred ---CCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCC
Q 042809 194 ---HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFIS 231 (241)
Q Consensus 194 ---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~ 231 (241)
...+..+..+.++|.+||..+|.+|||+++++.||||+
T Consensus 255 ~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 255 DLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred hHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 00123567899999999999999999999999999985
No 287
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=3.2e-36 Score=231.41 Aligned_cols=214 Identities=25% Similarity=0.390 Sum_probs=165.9
Q ss_pred CCcEEEEEeccc-hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHh-CCCCCHHHHHHH
Q 042809 5 TGALFVVKSAES-EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF-GGTLDAGVIRLY 77 (241)
Q Consensus 5 ~~~~vaiK~~~~-~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~ 77 (241)
++..||+|.+.. ....+.+.+|+.+++.++|+||++ ...+..++|+||+.+++|.+++... ...++......+
T Consensus 29 ~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 108 (261)
T cd05072 29 NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDF 108 (261)
T ss_pred CCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHH
Confidence 456789998764 334578899999999999999988 5667899999999999999999764 345666555555
Q ss_pred HH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCc
Q 042809 78 TK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDF 151 (241)
Q Consensus 78 ~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ 151 (241)
+. ++||+.+++|+||+|+||+++.++.++|+|||.+........ .......++..|+|||.+.+..++.
T Consensus 109 ~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~ 183 (261)
T cd05072 109 SAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-----TAREGAKFPIKWTAPEAINFGSFTI 183 (261)
T ss_pred HHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCce-----eccCCCccceecCCHHHhccCCCCh
Confidence 44 448999999999999999999999999999999976543111 1111223466799999998888899
Q ss_pred hhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 152 ATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 152 ~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
++|+||||+++|++++ |..||............ ............+..+.+++.+||..+|++|||++++.+
T Consensus 184 ~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 184 KSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSAL---QRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred hhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHH---HcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 9999999999999998 99999765433322222 222233344457789999999999999999999999864
No 288
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=3.3e-36 Score=230.47 Aligned_cols=212 Identities=24% Similarity=0.360 Sum_probs=167.6
Q ss_pred CCCCcEEEEEeccchHHHHHHHHHHHHHhhcCCCcccc----cCCceeeeeecccCCCCHHHHHHHhC-CCCCHHHHHHH
Q 042809 3 KGTGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG-GTLDAGVIRLY 77 (241)
Q Consensus 3 ~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~----~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~ 77 (241)
+.+++.||+|.+..+.....+.+|+.++++++|||+++ ...+..++||||+.+++|.+++.... ..++......+
T Consensus 26 ~~~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 105 (254)
T cd05083 26 EYTGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQF 105 (254)
T ss_pred ccCCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHH
Confidence 34788899999887666678999999999999999988 33445799999999999999998653 34666666555
Q ss_pred HHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCc
Q 042809 78 TKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDF 151 (241)
Q Consensus 78 ~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ 151 (241)
+.| +||+.|++||||+|+||+++.++.++|+|||.+...... ......+..|+|||.+.+..++.
T Consensus 106 ~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~---------~~~~~~~~~y~~pe~~~~~~~~~ 176 (254)
T cd05083 106 SLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG---------VDNSKLPVKWTAPEALKHKKFSS 176 (254)
T ss_pred HHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceecccc---------CCCCCCCceecCHHHhccCCcCc
Confidence 554 479999999999999999999999999999988643221 01122356799999998888999
Q ss_pred hhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 152 ATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 152 ~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
++|+||||+++|++++ |..||........... .........+...+..+.+++++||+.+|.+|||+++++.
T Consensus 177 ~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 177 KSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKEC---VEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred hhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHH---HhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9999999999999998 9999976544333222 2223333445567789999999999999999999999875
No 289
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=3.3e-36 Score=233.68 Aligned_cols=222 Identities=28% Similarity=0.417 Sum_probs=169.6
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHH
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAG 72 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 72 (241)
++.+++.+|+|.+... ...+.+.+|+.++++++|+|+++ ...+..++|+||++ ++|.+++......++..
T Consensus 20 ~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~i~~~~~~~~~~ 98 (282)
T cd07829 20 DKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-MDLKKYLDKRPGPLSPN 98 (282)
T ss_pred ecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-cCHHHHHHhhccCCCHH
Confidence 4567999999987743 33466789999999999999988 56688999999997 59999998854567777
Q ss_pred HHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 73 VIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 73 ~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
.+..++.++ ||+.|++||||+|+||+++.++.++|+|||.+........ ......++..|+|||.+.+
T Consensus 99 ~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~------~~~~~~~~~~~~aPE~~~~ 172 (282)
T cd07829 99 LIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR------TYTHEVVTLWYRAPEILLG 172 (282)
T ss_pred HHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc------ccCccccCcCcCChHHhcC
Confidence 777666644 7999999999999999999999999999999875433111 1122335677999999876
Q ss_pred c-CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhc-----------------CCCC--------CCChhhH
Q 042809 147 E-GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACS-----------------NEKP--------HFPTQFF 200 (241)
Q Consensus 147 ~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-----------------~~~~--------~~~~~~~ 200 (241)
. .++.++|+||||+++|++++|..||................. ...+ ...+..+
T Consensus 173 ~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (282)
T cd07829 173 SKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLD 252 (282)
T ss_pred CcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhccccc
Confidence 6 788999999999999999999999976543222111111000 0000 0011235
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 201 KKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 201 ~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
..+.+++.+||..+|.+||++++++.||||
T Consensus 253 ~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 253 PEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred HHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 689999999999999999999999999997
No 290
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=6.2e-36 Score=229.88 Aligned_cols=218 Identities=23% Similarity=0.325 Sum_probs=163.6
Q ss_pred CCcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc------cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHH
Q 042809 5 TGALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR------NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIR 75 (241)
Q Consensus 5 ~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 75 (241)
++..+|+|.+.. ....+.+.+|+.+++.++||||++ ..++..++|+||+.+++|.+++...........+.
T Consensus 22 ~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 101 (262)
T cd05058 22 QKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLI 101 (262)
T ss_pred ceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHH
Confidence 456899998753 234567889999999999999987 34556899999999999999998755555555544
Q ss_pred HHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCC
Q 042809 76 LYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGL 149 (241)
Q Consensus 76 ~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~ 149 (241)
.++. .+||+.+++|+||+|+||+++.++.++|+|||++.......... ........++..|+|||.+.+..+
T Consensus 102 ~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~ 179 (262)
T cd05058 102 GFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS--VHNHTGAKLPVKWMALESLQTQKF 179 (262)
T ss_pred HHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCccee--ecccccCcCCccccChhHhccCcc
Confidence 4444 44899999999999999999999999999999987543211000 011112335678999999988889
Q ss_pred CchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcC
Q 042809 150 DFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227 (241)
Q Consensus 150 ~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 227 (241)
+.++||||||+++|++++ |.+||...... ...........+..+...+..+.+++.+||..+|.+||++.+++..
T Consensus 180 ~~~~Di~slG~~l~el~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~ 255 (262)
T cd05058 180 TTKSDVWSFGVLLWELMTRGAPPYPDVDSF---DITVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSR 255 (262)
T ss_pred chHHHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 999999999999999999 55666543222 2223333334444455567889999999999999999999999863
No 291
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=4.2e-36 Score=232.63 Aligned_cols=216 Identities=20% Similarity=0.305 Sum_probs=167.9
Q ss_pred CCCcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCC--------
Q 042809 4 GTGALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGG-------- 67 (241)
Q Consensus 4 ~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~-------- 67 (241)
.++..||+|.+... .....+.+|+.+++.++||||++ ......++||||+++++|.+++.....
T Consensus 34 ~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~ 113 (277)
T cd05032 34 EPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGL 113 (277)
T ss_pred CcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCC
Confidence 45688999997633 33456889999999999999988 566789999999999999999976321
Q ss_pred -CCCHHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccC
Q 042809 68 -TLDAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMA 140 (241)
Q Consensus 68 -~~~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 140 (241)
.+++..+..++. .+||+.+++|+||+|+||+++.++.++|+|||++........ ........++..|+|
T Consensus 114 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~~~~y~a 189 (277)
T cd05032 114 GPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDY----YRKGGKGLLPVRWMA 189 (277)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcccchhhccCcc----cccCCCCCccccccC
Confidence 244455554444 447999999999999999999999999999999875433111 111122335678999
Q ss_pred cccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC
Q 042809 141 PEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219 (241)
Q Consensus 141 PE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 219 (241)
||.+.+..++.++|+||||+++|++++ |..||.......... ..........+...+..+.+++.+||+.+|.+||
T Consensus 190 PE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 266 (277)
T cd05032 190 PESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLK---FVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRP 266 (277)
T ss_pred HHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHH---HHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCC
Confidence 999988888999999999999999998 999997654433332 2223444555666788999999999999999999
Q ss_pred ChHHHhc
Q 042809 220 SAEELLN 226 (241)
Q Consensus 220 s~~~~l~ 226 (241)
|+.++++
T Consensus 267 t~~~l~~ 273 (277)
T cd05032 267 TFLEIVS 273 (277)
T ss_pred CHHHHHH
Confidence 9999976
No 292
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=4.4e-36 Score=235.92 Aligned_cols=220 Identities=30% Similarity=0.423 Sum_probs=170.5
Q ss_pred CCCCCcEEEEEeccc-----hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAES-----EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.++..+|+|.+.. ......+.+|+++++.++|+|+++ ......++|+||+. |+|.+++......++.
T Consensus 36 ~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~l~~ 114 (308)
T cd06634 36 DVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQE 114 (308)
T ss_pred EcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC-CCHHHHHHHcCCCCCH
Confidence 456789999998752 233456889999999999999988 46678999999996 6888888765666777
Q ss_pred HHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++.+ +||+.+++||||+|+||+++.++.++|+|||++..... .....++..|+|||.+.
T Consensus 115 ~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~----------~~~~~~~~~y~aPE~~~ 184 (308)
T cd06634 115 VEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP----------ANXFVGTPYWMAPEVIL 184 (308)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecC----------cccccCCccccCHHHHh
Confidence 777666554 47999999999999999999999999999998864432 11234678899999975
Q ss_pred ---ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChH
Q 042809 146 ---NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAE 222 (241)
Q Consensus 146 ---~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 222 (241)
...++.++||||||+++|++++|..||............ .............+..+.++|.+||..+|.+||+++
T Consensus 185 ~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~ 262 (308)
T cd06634 185 AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI--AQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSE 262 (308)
T ss_pred hcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHH--hhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHH
Confidence 345678999999999999999999998664322221111 111112222345677899999999999999999999
Q ss_pred HHhcCCCCCCCC
Q 042809 223 ELLNHTFISGNA 234 (241)
Q Consensus 223 ~~l~~p~~~~~~ 234 (241)
+++.|||+....
T Consensus 263 ~ll~~~~~~~~~ 274 (308)
T cd06634 263 VLLKHRFVLRER 274 (308)
T ss_pred HHhhCccccccC
Confidence 999999997754
No 293
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1.7e-36 Score=241.52 Aligned_cols=224 Identities=23% Similarity=0.369 Sum_probs=168.6
Q ss_pred CCCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCcccc-----cCC------ceeeeeecccCCCCHHHHHHHhC
Q 042809 2 NKGTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGR-----NGE------KTVNIFMEYMAGGSLLDVAEKFG 66 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~------~~~~lv~e~~~~~~L~~~l~~~~ 66 (241)
++.+++.||+|.+.. ......+.+|+.++++++|||+++ ... ...++|+||+ +++|.+++..
T Consensus 36 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-- 112 (343)
T cd07851 36 DTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLM-GADLNNIVKC-- 112 (343)
T ss_pred ECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecC-CCCHHHHHhc--
Confidence 456789999998763 233466788999999999999987 222 2489999999 5799999875
Q ss_pred CCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccC
Q 042809 67 GTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMA 140 (241)
Q Consensus 67 ~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 140 (241)
..+++..+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||++...... .....++..|+|
T Consensus 113 ~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~---------~~~~~~~~~y~a 183 (343)
T cd07851 113 QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE---------MTGYVATRWYRA 183 (343)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccccc---------ccCCcccccccC
Confidence 467777766666544 79999999999999999999999999999998754321 122346788999
Q ss_pred cccccc-cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCC------------------------CCC-
Q 042809 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNE------------------------KPH- 194 (241)
Q Consensus 141 PE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~------------------------~~~- 194 (241)
||.+.+ ..++.++|+||||+++|++++|+.||.+................. ...
T Consensus 184 PE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (343)
T cd07851 184 PEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDF 263 (343)
T ss_pred HHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCH
Confidence 999865 457889999999999999999999997643322211111110000 000
Q ss_pred --CChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCccC
Q 042809 195 --FPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKN 237 (241)
Q Consensus 195 --~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~~~ 237 (241)
.....+..+.+++.+||+.+|.+|||+.+++.||||+......
T Consensus 264 ~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~~ 308 (343)
T cd07851 264 KEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDPE 308 (343)
T ss_pred HHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCCc
Confidence 0112467899999999999999999999999999998765543
No 294
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=4.6e-36 Score=229.18 Aligned_cols=214 Identities=25% Similarity=0.355 Sum_probs=167.2
Q ss_pred CcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHH
Q 042809 6 GALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY 77 (241)
Q Consensus 6 ~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 77 (241)
++.|++|.+... .....+.+|+++++++.|+||++ ......++|+||+++++|.+++......++...+..+
T Consensus 19 ~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~ 98 (251)
T cd05041 19 NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQM 98 (251)
T ss_pred CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHH
Confidence 889999987743 24567899999999999999987 6677899999999999999999875556677666555
Q ss_pred HH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCc
Q 042809 78 TK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDF 151 (241)
Q Consensus 78 ~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ 151 (241)
+. ++||+++++|+||+|+||+++.++.++|+|||.+........ .........+..|+|||.+.+..++.
T Consensus 99 ~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~----~~~~~~~~~~~~y~~PE~~~~~~~~~ 174 (251)
T cd05041 99 SLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIY----TVSDGLKQIPIKWTAPEALNYGRYTS 174 (251)
T ss_pred HHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcc----eeccccCcceeccCChHhhccCCCCc
Confidence 44 448999999999999999999999999999999875432110 00001122356699999998888999
Q ss_pred hhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 152 ATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 152 ~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
++|+||||+++|++++ |..||............. .......+...+..+.+++.+||..+|.+|||+.++++
T Consensus 175 ~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 175 ESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIE---SGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred chhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHh---cCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 9999999999999999 889987654433322222 22233445567789999999999999999999999986
No 295
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=5.8e-36 Score=232.11 Aligned_cols=212 Identities=24% Similarity=0.315 Sum_probs=165.5
Q ss_pred EEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHHHH
Q 042809 8 LFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKE 80 (241)
Q Consensus 8 ~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 80 (241)
.+++|..... .....+.+|+..+.++.||||++ ......++++||+.+|+|.+++......+++..+..++.|
T Consensus 38 ~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~q 117 (279)
T cd05111 38 PVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQ 117 (279)
T ss_pred EEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHH
Confidence 4788887632 23466788888999999999998 3455678999999999999999876667788777777665
Q ss_pred H------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCchhh
Q 042809 81 I------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATD 154 (241)
Q Consensus 81 ~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~D 154 (241)
+ ||++|++|+||+|+||+++.++.++|+|||.+........ ........++..|+|||.+.+..++.++|
T Consensus 118 i~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~~~~~y~~pE~~~~~~~~~~~D 193 (279)
T cd05111 118 IAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDK----KYFYSEHKTPIKWMALESILFGRYTHQSD 193 (279)
T ss_pred HHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCc----ccccCCCCCcccccCHHHhccCCcCchhh
Confidence 5 7999999999999999999999999999999875432111 11122334667899999999888999999
Q ss_pred HHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 155 IWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 155 i~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
+||||+++|++++ |..||.+.......... ..+.....+...+.++.+++.+||..+|.+|||+.+++.
T Consensus 194 v~slG~il~el~t~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 194 VWSYGVTVWEMMSYGAEPYAGMRPHEVPDLL---EKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH---HCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 9999999999998 99999765433332222 223333344456678899999999999999999999876
No 296
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2.8e-36 Score=234.66 Aligned_cols=223 Identities=29% Similarity=0.461 Sum_probs=168.8
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-----cCC--ceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-----NGE--KTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-----~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
++.+|+.+|+|.+... .....+.+|+.+++.++|+|+++ ... +..++|+||++ ++|.+++......++
T Consensus 20 ~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~ 98 (287)
T cd07840 20 NKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMD-HDLTGLLDSPEVKFT 98 (287)
T ss_pred ECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecccc-ccHHHHHhccCCCCC
Confidence 4567899999998743 23456889999999999999987 333 78999999997 499999887555778
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+..+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||.+........ .......++..|+|||.+
T Consensus 99 ~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~-----~~~~~~~~~~~y~~PE~~ 173 (287)
T cd07840 99 ESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS-----ADYTNRVITLWYRPPELL 173 (287)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc-----ccccccccccccCCceee
Confidence 87777666654 7999999999999999999999999999999976544211 111223457789999987
Q ss_pred cc-cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCC-------------------CCCC--------C
Q 042809 145 RN-EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNE-------------------KPHF--------P 196 (241)
Q Consensus 145 ~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------------------~~~~--------~ 196 (241)
.+ ..++.++|+||||+++|++++|..||................... .... .
T Consensus 174 ~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (287)
T cd07840 174 LGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFK 253 (287)
T ss_pred EccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhc
Confidence 65 457889999999999999999999997654332222211111000 0000 0
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 197 TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 197 ~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
..++..+.+++++||..+|.+|||+++++.||||
T Consensus 254 ~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 254 HLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred ccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 1126788999999999999999999999999997
No 297
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=2.5e-36 Score=236.11 Aligned_cols=227 Identities=29% Similarity=0.455 Sum_probs=169.5
Q ss_pred CCCCCcEEEEEeccch---HHHHHHHHHHHHHhhcC-CCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHH
Q 042809 2 NKGTGALFVVKSAESE---AGVQALRNEAEIRQSLN-SPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAG 72 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~-h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 72 (241)
++.+|+.||+|.+... .....+..|+.++.+.. ||||++ ......|+||||+. ++|.+++......+++.
T Consensus 36 ~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~l~~~~~~~l~~~ 114 (296)
T cd06618 36 FKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMS-TCLDKLLKRIQGPIPED 114 (296)
T ss_pred ECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccC-cCHHHHHHHhcCCCCHH
Confidence 3456899999998642 33455667777666665 999988 56778999999995 58888887756677777
Q ss_pred HHHHHHHHH------hhc-CCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 73 VIRLYTKEI------LHG-NGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 73 ~~~~~~~~~------Lh~-~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
.+..++.++ ||+ .|++||||+|+||+++.++.++|+|||++........ .....++..|+|||.+.
T Consensus 115 ~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~-------~~~~~~~~~y~aPE~~~ 187 (296)
T cd06618 115 ILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA-------KTRSAGCAAYMAPERID 187 (296)
T ss_pred HHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCc-------ccCCCCCccccCHhhcC
Confidence 766666544 797 6999999999999999999999999999865432111 11223677899999987
Q ss_pred ccC----CCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCC--hhhHHHHHHHHHHhhccCCCCCC
Q 042809 146 NEG----LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP--TQFFKKVLDFLAKCLERKPEKRW 219 (241)
Q Consensus 146 ~~~----~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rp 219 (241)
+.. ++.++|+||||+++|++++|..||...... ............+..+ ...+..+.+++.+||..+|.+||
T Consensus 188 ~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp 265 (296)
T cd06618 188 PPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE--FEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRP 265 (296)
T ss_pred CCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH--HHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCC
Confidence 553 678999999999999999999999653221 1112222222222222 23577899999999999999999
Q ss_pred ChHHHhcCCCCCCCCccCC
Q 042809 220 SAEELLNHTFISGNAKKNS 238 (241)
Q Consensus 220 s~~~~l~~p~~~~~~~~~~ 238 (241)
|++++++||||.....+.+
T Consensus 266 ~~~~il~~~~~~~~~~~~~ 284 (296)
T cd06618 266 KYRELLQHPFIRRYETAEV 284 (296)
T ss_pred CHHHHhcChhhhccchhHH
Confidence 9999999999987655443
No 298
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=2.4e-36 Score=238.27 Aligned_cols=222 Identities=26% Similarity=0.390 Sum_probs=163.5
Q ss_pred CCcEEEEEeccc-----hHHHHHHHHHHHHHhhcCCCcccc-----cCC--ceeeeeecccCCCCHHHHHHHhC----CC
Q 042809 5 TGALFVVKSAES-----EAGVQALRNEAEIRQSLNSPNIGR-----NGE--KTVNIFMEYMAGGSLLDVAEKFG----GT 68 (241)
Q Consensus 5 ~~~~vaiK~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~--~~~~lv~e~~~~~~L~~~l~~~~----~~ 68 (241)
+|..||+|.+.. ....+.+.+|+.+++.++||||++ ... ..+++|+||+++ +|.+++.... ..
T Consensus 26 ~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~ 104 (316)
T cd07842 26 DGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAEH-DLWQIIKFHRQAKRVS 104 (316)
T ss_pred CCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeCCCc-CHHHHHHhhccCCCcC
Confidence 789999999875 334567889999999999999988 333 789999999974 7777765432 25
Q ss_pred CCHHHHHHHHHHH------hhcCCccccCCCCCcEEeec----CCCeeecCCCcchhhcccccCCccccccccccCcccc
Q 042809 69 LDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGS----HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLW 138 (241)
Q Consensus 69 ~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~----~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (241)
+++..+..++.|+ ||+.+++|+||+|+||+++. ++.+||+|||++......... ........++..|
T Consensus 105 ~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~~~~~~~~y 181 (316)
T cd07842 105 IPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKP---LADLDPVVVTIWY 181 (316)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCccc---ccccCCccccccc
Confidence 6777766665544 79999999999999999999 899999999998755332111 1111234568889
Q ss_pred cCccccccc-CCCchhhHHHHHHHHHHHHhCCCCCccchhch----------HHHHHHHH--------------------
Q 042809 139 MAPEVLRNE-GLDFATDIWSLGCMVIEMATGRPPWGDKISNA----------AATLLKIA-------------------- 187 (241)
Q Consensus 139 ~aPE~~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----------~~~~~~~~-------------------- 187 (241)
+|||.+.+. .++.++|+||||++++++++|+.||.+..... ........
T Consensus 182 ~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 261 (316)
T cd07842 182 RAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTL 261 (316)
T ss_pred cCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhh
Confidence 999988764 57889999999999999999999997543322 00000000
Q ss_pred -hcCCCCCCC-----------hhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 188 -CSNEKPHFP-----------TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 188 -~~~~~~~~~-----------~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
........+ ...+..+.+++.+||+.+|++|||+.++++||||
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 262 MKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred hhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 000001111 0344578999999999999999999999999998
No 299
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=7.9e-36 Score=228.56 Aligned_cols=210 Identities=26% Similarity=0.390 Sum_probs=169.2
Q ss_pred CCcEEEEEeccchHH-HHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCC-CCCHHHHHHH
Q 042809 5 TGALFVVKSAESEAG-VQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGG-TLDAGVIRLY 77 (241)
Q Consensus 5 ~~~~vaiK~~~~~~~-~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~ 77 (241)
.|+.||+|.+..... .+.+.+|+.+++.++|+||++ ......++||||+++++|.+++..... .+++..+..+
T Consensus 28 ~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ 107 (256)
T cd05039 28 RGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGF 107 (256)
T ss_pred cCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHH
Confidence 478899999886654 678999999999999999988 557889999999999999999987432 5677777766
Q ss_pred HHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCc
Q 042809 78 TKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDF 151 (241)
Q Consensus 78 ~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ 151 (241)
+.|+ ||+.|++|+||+|+||+++.++.++|+|||.+........ ....+..|+|||.+.+..++.
T Consensus 108 ~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~---------~~~~~~~~~ape~~~~~~~~~ 178 (256)
T cd05039 108 ALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD---------SGKLPVKWTAPEALREKKFST 178 (256)
T ss_pred HHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccccc---------cCCCcccccCchhhcCCcCCc
Confidence 6654 7999999999999999999999999999999976532111 122356799999998888899
Q ss_pred hhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 152 ATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 152 ~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
++|+||||+++|++++ |..||............ ........+...++.+.+++.+||..+|.+|||+.+++.
T Consensus 179 ~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 179 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHV---EKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH---hcCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 9999999999999997 99999765433332222 222333445567789999999999999999999999975
No 300
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=6.5e-36 Score=229.81 Aligned_cols=212 Identities=25% Similarity=0.393 Sum_probs=164.4
Q ss_pred cEEEEEeccch-HHHHHHHHHHHHHhhcCCCcccc----cCCceeeeeecccCCCCHHHHHHHh-CCCCCHHHHHHHHHH
Q 042809 7 ALFVVKSAESE-AGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKF-GGTLDAGVIRLYTKE 80 (241)
Q Consensus 7 ~~vaiK~~~~~-~~~~~~~~e~~~l~~l~h~~i~~----~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~ 80 (241)
..||+|.+... ...+.+.+|+.++++++||||++ ......++||||+.+++|.+++... +..+++..+..++.+
T Consensus 31 ~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 110 (262)
T cd05071 31 TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 110 (262)
T ss_pred ceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHH
Confidence 46899998753 33567899999999999999987 4456689999999999999999864 334666666665554
Q ss_pred H------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCchhh
Q 042809 81 I------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATD 154 (241)
Q Consensus 81 ~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~D 154 (241)
+ ||+.+++|+||+|+||+++.++.++|+|||.+........ .......++..|+|||...+..++.++|
T Consensus 111 l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~D 185 (262)
T cd05071 111 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-----TARQGAKFPIKWTAPEAALYGRFTIKSD 185 (262)
T ss_pred HHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccccc-----ccccCCcccceecCHhHhccCCCCchhh
Confidence 4 7999999999999999999999999999999865433111 1111223567799999998888999999
Q ss_pred HHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 155 IWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 155 i~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
+||||+++|++++ |..||.+....... ...........+...+..+.+++.+||+.+|.+|||++++++
T Consensus 186 vwslG~~l~ellt~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 186 VWSFGILLTELTTKGRVPYPGMVNREVL---DQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCChHHHH---HHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 9999999999999 88899765433222 222223333445667889999999999999999999999875
No 301
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=6.8e-36 Score=230.55 Aligned_cols=217 Identities=21% Similarity=0.322 Sum_probs=167.2
Q ss_pred CcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHH
Q 042809 6 GALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY 77 (241)
Q Consensus 6 ~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 77 (241)
+..||+|.+.. +.....+..|+.+++.++||||++ ..+...++||||+++++|.+++....+.++...+..+
T Consensus 32 ~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i 111 (269)
T cd05065 32 EIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGM 111 (269)
T ss_pred ceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHH
Confidence 34799999773 344678999999999999999988 5677899999999999999999876666777777766
Q ss_pred HHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCc
Q 042809 78 TKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDF 151 (241)
Q Consensus 78 ~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ 151 (241)
+.|+ ||++|++|+||+|+||+++.++.++|+|||.+............... .....+..|+|||.+.+..++.
T Consensus 112 ~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~-~~~~~~~~y~~PE~~~~~~~~~ 190 (269)
T cd05065 112 LRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSS-LGGKIPIRWTAPEAIAYRKFTS 190 (269)
T ss_pred HHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCccccccccc-cCCCcceeecCHhHhccCcccc
Confidence 6544 79999999999999999999999999999988654331111110000 0011235799999999888999
Q ss_pred hhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 152 ATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 152 ~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
++|+||||+++|++++ |..||............ ........+...+..+.+++.+||..+|.+||++++++.
T Consensus 191 ~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i---~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 191 ASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAI---EQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred hhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHH---HcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9999999999999887 99999765433322222 222333444566788999999999999999999999975
No 302
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=4e-36 Score=236.40 Aligned_cols=228 Identities=28% Similarity=0.421 Sum_probs=167.2
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-------------cCCceeeeeecccCCCCHHHHHHH
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-------------NGEKTVNIFMEYMAGGSLLDVAEK 64 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-------------~~~~~~~lv~e~~~~~~L~~~l~~ 64 (241)
++.+|+.+|+|.+... .....+.+|+++++.++||||++ .....+++|+||+. ++|...+..
T Consensus 29 ~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~-~~l~~~~~~ 107 (311)
T cd07866 29 QIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMD-HDLSGLLEN 107 (311)
T ss_pred ECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCC-cCHHHHHhc
Confidence 4678899999987532 22345778999999999999987 11345799999996 478887776
Q ss_pred hCCCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCc-----ccccccccc
Q 042809 65 FGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGN-----LKQSWQSIG 133 (241)
Q Consensus 65 ~~~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~-----~~~~~~~~~ 133 (241)
....+++..+..++.|+ ||++|++|+||+|+||+++.++.++|+|||++........... .........
T Consensus 108 ~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (311)
T cd07866 108 PSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLV 187 (311)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccce
Confidence 55678888877776655 7999999999999999999999999999999975533211111 111222345
Q ss_pred CcccccCccccccc-CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCC-------------------C
Q 042809 134 GTQLWMAPEVLRNE-GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEK-------------------P 193 (241)
Q Consensus 134 ~~~~~~aPE~~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------~ 193 (241)
+++.|+|||.+.+. .++.++|+||+|+++|++++|..||.+.................. .
T Consensus 188 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (311)
T cd07866 188 VTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFT 267 (311)
T ss_pred eccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCC
Confidence 67889999988654 478899999999999999999999976544332222211111000 0
Q ss_pred CCC-------hhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 194 HFP-------TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 194 ~~~-------~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
..+ ......+.+++.+||+.+|.+|||+.+++.||||
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 268 NYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred CCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 001 1233578899999999999999999999999998
No 303
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=4e-36 Score=237.91 Aligned_cols=227 Identities=24% Similarity=0.359 Sum_probs=169.4
Q ss_pred CCCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCcccc------cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGR------NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++.+|+.||+|.+.. ....+.+.+|++++..++||||++ ......++|+||+ +++|.+++.. ..++.
T Consensus 31 ~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~--~~~~~ 107 (328)
T cd07856 31 DQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELL-GTDLHRLLTS--RPLEK 107 (328)
T ss_pred ECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehh-ccCHHHHHhc--CCCCH
Confidence 567899999998653 234567889999999999999988 3355789999999 5699988874 34566
Q ss_pred HHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++. ++||+.|++|+||+|+||+++.++.++|+|||.+..... ......++..|+|||.+.
T Consensus 108 ~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~---------~~~~~~~~~~y~aPE~~~ 178 (328)
T cd07856 108 QFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDP---------QMTGYVSTRYYRAPEIML 178 (328)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCC---------CcCCCcccccccCceeee
Confidence 55555544 448999999999999999999999999999999864322 111234677899999886
Q ss_pred c-cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHh----------------------cCCCCCC-----Ch
Q 042809 146 N-EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIAC----------------------SNEKPHF-----PT 197 (241)
Q Consensus 146 ~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~----------------------~~~~~~~-----~~ 197 (241)
+ ..++.++|+||||+++|++++|..||................ ....... ..
T Consensus 179 ~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (328)
T cd07856 179 TWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFK 258 (328)
T ss_pred ccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcC
Confidence 5 567899999999999999999999996543221111111000 0000111 12
Q ss_pred hhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCccCCCC
Q 042809 198 QFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNSTE 240 (241)
Q Consensus 198 ~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~~~~~~ 240 (241)
..+..+.++|++||+.+|.+|||+++++.||||.....+.+.+
T Consensus 259 ~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~~~~~ 301 (328)
T cd07856 259 NADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPTDEP 301 (328)
T ss_pred CCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCCcccc
Confidence 3467899999999999999999999999999998776665543
No 304
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=3.1e-36 Score=235.19 Aligned_cols=217 Identities=22% Similarity=0.346 Sum_probs=167.0
Q ss_pred CCCcEEEEEeccc---hHHHHHHHHHHHHHhhc-CCCcccc-----cCCceeeeeecccCCCCHHHHHHHh---------
Q 042809 4 GTGALFVVKSAES---EAGVQALRNEAEIRQSL-NSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF--------- 65 (241)
Q Consensus 4 ~~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~--------- 65 (241)
..+..+|+|.+.. +.....+.+|+.++.++ +|+||++ ..++.+++||||+.+++|.+++...
T Consensus 40 ~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~ 119 (293)
T cd05053 40 NETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASP 119 (293)
T ss_pred CCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCcccccc
Confidence 3457899998764 23446688999999999 7999988 5667899999999999999999753
Q ss_pred ------CCCCCHHHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCcccccccccc
Q 042809 66 ------GGTLDAGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133 (241)
Q Consensus 66 ------~~~~~~~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~ 133 (241)
...++...+..++.| +||+.|++||||+|+||+++.++.++|+|||.+........ ........
T Consensus 120 ~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~----~~~~~~~~ 195 (293)
T cd05053 120 DDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDY----YRKTTNGR 195 (293)
T ss_pred ccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccccccccccccc----eeccCCCC
Confidence 234566655555554 48999999999999999999999999999999875433111 11111122
Q ss_pred CcccccCcccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhc
Q 042809 134 GTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLE 212 (241)
Q Consensus 134 ~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 212 (241)
++..|+|||.+.+..++.++||||||+++|++++ |..||.......... ..........+...+..+.+++.+||.
T Consensus 196 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~~l~ 272 (293)
T cd05053 196 LPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK---LLKEGYRMEKPQNCTQELYHLMRDCWH 272 (293)
T ss_pred CCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHH---HHHcCCcCCCCCCCCHHHHHHHHHHcc
Confidence 4567999999988889999999999999999998 999997654333222 222333444556677899999999999
Q ss_pred cCCCCCCChHHHhcC
Q 042809 213 RKPEKRWSAEELLNH 227 (241)
Q Consensus 213 ~~p~~Rps~~~~l~~ 227 (241)
.+|++|||+.+++++
T Consensus 273 ~~p~~Rps~~eil~~ 287 (293)
T cd05053 273 EVPSQRPTFKQLVED 287 (293)
T ss_pred cCcccCcCHHHHHHH
Confidence 999999999999874
No 305
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=5.6e-36 Score=241.94 Aligned_cols=216 Identities=28% Similarity=0.322 Sum_probs=162.9
Q ss_pred CCcEEEEEeccc---hHHHHHHHHHHHHHhhcC-CCcccc-----cCCceeeeeecccCCCCHHHHHHHhC---------
Q 042809 5 TGALFVVKSAES---EAGVQALRNEAEIRQSLN-SPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG--------- 66 (241)
Q Consensus 5 ~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~-h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~--------- 66 (241)
++..||+|++.. ....+.+.+|+.++.++. ||||++ ...+..|+|||||++|+|.+++....
T Consensus 66 ~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~ 145 (400)
T cd05105 66 PVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPE 145 (400)
T ss_pred CceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccc
Confidence 345799999863 233567899999999996 999998 56778999999999999999886531
Q ss_pred --------------------------------------------------------------------------------
Q 042809 67 -------------------------------------------------------------------------------- 66 (241)
Q Consensus 67 -------------------------------------------------------------------------------- 66 (241)
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 225 (400)
T cd05105 146 KPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNL 225 (400)
T ss_pred cccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHH
Confidence
Q ss_pred ------CCCCHHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccC
Q 042809 67 ------GTLDAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGG 134 (241)
Q Consensus 67 ------~~~~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ 134 (241)
..++...+..++. .+||+.+++|+||+|+||+++.++.++|+|||++........ ........+
T Consensus 226 ~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~----~~~~~~~~~ 301 (400)
T cd05105 226 LSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSN----YVSKGSTFL 301 (400)
T ss_pred HHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceecccccc----ccccCCcCC
Confidence 1233333344443 458999999999999999999999999999999875432111 111122335
Q ss_pred cccccCcccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhcc
Q 042809 135 TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLER 213 (241)
Q Consensus 135 ~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 213 (241)
+..|+|||.+.+..++.++||||||+++|++++ |..||......... ............+...+..+.+++.+||+.
T Consensus 302 ~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 379 (400)
T cd05105 302 PVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTF--YNKIKSGYRMAKPDHATQEVYDIMVKCWNS 379 (400)
T ss_pred CcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHH--HHHHhcCCCCCCCccCCHHHHHHHHHHCcc
Confidence 678999999988889999999999999999997 99998654322211 111222233445566788999999999999
Q ss_pred CCCCCCChHHHhc
Q 042809 214 KPEKRWSAEELLN 226 (241)
Q Consensus 214 ~p~~Rps~~~~l~ 226 (241)
+|++|||+.++.+
T Consensus 380 dP~~RPt~~~l~~ 392 (400)
T cd05105 380 EPEKRPSFLHLSD 392 (400)
T ss_pred CHhHCcCHHHHHH
Confidence 9999999998865
No 306
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=6.4e-36 Score=233.76 Aligned_cols=219 Identities=21% Similarity=0.313 Sum_probs=166.0
Q ss_pred CCCcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC---------
Q 042809 4 GTGALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG--------- 66 (241)
Q Consensus 4 ~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~--------- 66 (241)
..+..||+|.+... ...+.+.+|++++.+++||||++ ..++..++|+||+.+++|.+++....
T Consensus 44 ~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 123 (296)
T cd05051 44 DAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACN 123 (296)
T ss_pred CCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhccccccccccc
Confidence 35577999997743 34667899999999999999988 55688999999999999999998743
Q ss_pred -CCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCccccc
Q 042809 67 -GTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWM 139 (241)
Q Consensus 67 -~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (241)
..++...+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||++....... .........++..|+
T Consensus 124 ~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~~~~~y~ 199 (296)
T cd05051 124 SKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSD----YYRVQGRAPLPIRWM 199 (296)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCCCceEEccccceeecccCc----ceeecCcCCCCceec
Confidence 156777776666544 799999999999999999999999999999986543211 011112334567899
Q ss_pred CcccccccCCCchhhHHHHHHHHHHHHh--CCCCCccchhchHHHHHHHH----hcCCCCCCChhhHHHHHHHHHHhhcc
Q 042809 140 APEVLRNEGLDFATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKIA----CSNEKPHFPTQFFKKVLDFLAKCLER 213 (241)
Q Consensus 140 aPE~~~~~~~~~~~Di~slG~~l~~l~~--g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~ 213 (241)
|||.+.+..++.++||||||+++|++++ +..||............... ........+...+.++.+++.+||+.
T Consensus 200 aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 279 (296)
T cd05051 200 AWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRR 279 (296)
T ss_pred CHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhcc
Confidence 9999988889999999999999999998 77888654332222111111 01111223445668999999999999
Q ss_pred CCCCCCChHHHhc
Q 042809 214 KPEKRWSAEELLN 226 (241)
Q Consensus 214 ~p~~Rps~~~~l~ 226 (241)
+|.+|||+.++++
T Consensus 280 ~p~~Rpt~~el~~ 292 (296)
T cd05051 280 DEEDRPTFREIHL 292 (296)
T ss_pred ChhcCCCHHHHHH
Confidence 9999999999965
No 307
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=5.9e-36 Score=229.82 Aligned_cols=214 Identities=24% Similarity=0.378 Sum_probs=165.7
Q ss_pred CCcEEEEEeccch-HHHHHHHHHHHHHhhcCCCcccc----cCCceeeeeecccCCCCHHHHHHHh-CCCCCHHHHHHHH
Q 042809 5 TGALFVVKSAESE-AGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKF-GGTLDAGVIRLYT 78 (241)
Q Consensus 5 ~~~~vaiK~~~~~-~~~~~~~~e~~~l~~l~h~~i~~----~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ 78 (241)
++..+|+|.+... ...+.+.+|+.++++++|+|+++ ......++||||+++++|.+++... ...++...+..++
T Consensus 29 ~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 108 (260)
T cd05070 29 GNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMA 108 (260)
T ss_pred CCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHH
Confidence 4567899987742 33467899999999999999988 4455689999999999999999764 2346766666655
Q ss_pred HH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCch
Q 042809 79 KE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFA 152 (241)
Q Consensus 79 ~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~ 152 (241)
.+ +||+.|++|+||+|+||+++.++.++|+|||.+........ .......++..|+|||...+..++.+
T Consensus 109 ~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~ 183 (260)
T cd05070 109 AQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY-----TARQGAKFPIKWTAPEAALYGRFTIK 183 (260)
T ss_pred HHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCccc-----ccccCCCCCccccChHHHhcCCCcch
Confidence 54 47999999999999999999999999999999975433110 01111224567999999988888999
Q ss_pred hhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 153 TDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 153 ~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
+|+||||+++|++++ |..||.+..... .............+...+..+.+++.+||..+|.+|||++++.+
T Consensus 184 ~Di~slG~~l~~l~~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 184 SDVWSFGILLTELVTKGRVPYPGMNNRE---VLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred hhhHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 999999999999999 899997643322 22222233344556677889999999999999999999999864
No 308
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=4.2e-36 Score=239.28 Aligned_cols=225 Identities=23% Similarity=0.343 Sum_probs=168.9
Q ss_pred CCCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCcccc-----cCC------ceeeeeecccCCCCHHHHHHHhC
Q 042809 2 NKGTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGR-----NGE------KTVNIFMEYMAGGSLLDVAEKFG 66 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~------~~~~lv~e~~~~~~L~~~l~~~~ 66 (241)
+..+|+.||+|.+.. ......+.+|+.++++++||||++ ..+ ...++|+||+ +++|.+++..
T Consensus 36 ~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~-- 112 (343)
T cd07880 36 DRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKH-- 112 (343)
T ss_pred ECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEEecC-CCCHHHHHhc--
Confidence 567899999998753 233456889999999999999987 111 2468999999 6799988875
Q ss_pred CCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccC
Q 042809 67 GTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMA 140 (241)
Q Consensus 67 ~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 140 (241)
..+++..+..++.|+ ||+.|++||||+|+||+++.++.++|+|||++...... .....+++.|+|
T Consensus 113 ~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~---------~~~~~~~~~y~a 183 (343)
T cd07880 113 EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE---------MTGYVVTRWYRA 183 (343)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccC---------ccccccCCcccC
Confidence 467777777766654 79999999999999999999999999999998754321 112346788999
Q ss_pred cccccc-cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcC-----------------------CC----
Q 042809 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN-----------------------EK---- 192 (241)
Q Consensus 141 PE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----------------------~~---- 192 (241)
||.+.+ ..++.++|+||+|+++|++++|..||.+................ ..
T Consensus 184 PE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (343)
T cd07880 184 PEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDF 263 (343)
T ss_pred HHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchH
Confidence 999876 45788999999999999999999999764322111110000000 00
Q ss_pred CCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCccCC
Q 042809 193 PHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKNS 238 (241)
Q Consensus 193 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~~~~ 238 (241)
.......+..+.+++.+|++.+|.+|||+.+++.||||+......+
T Consensus 264 ~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~~~ 309 (343)
T cd07880 264 RSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDPED 309 (343)
T ss_pred HHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCccc
Confidence 0011235567899999999999999999999999999987655433
No 309
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=4e-37 Score=246.46 Aligned_cols=215 Identities=24% Similarity=0.357 Sum_probs=180.6
Q ss_pred CCCcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHH
Q 042809 4 GTGALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRL 76 (241)
Q Consensus 4 ~~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 76 (241)
+.+--||||..+. ....+.|.+|+-+|+.++||||++ -.+...|+|||.+..|.|.+|++.....++......
T Consensus 416 ge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~l 495 (974)
T KOG4257|consen 416 GERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPMWIVMELAPLGELREYLQQNKDSLPLRTLTL 495 (974)
T ss_pred CcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccceeEEEecccchhHHHHHHhccccchHHHHHH
Confidence 3445588888663 355788999999999999999999 567889999999999999999999888899999888
Q ss_pred HHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCC
Q 042809 77 YTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLD 150 (241)
Q Consensus 77 ~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~ 150 (241)
++.|+ ||++++|||||...||++++...+||+|||++...++...... . ...-+.-|+|||.+..+.++
T Consensus 496 y~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYka----S-~~kLPIKWmaPESINfRrFT 570 (974)
T KOG4257|consen 496 YCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKA----S-RGKLPIKWMAPESINFRRFT 570 (974)
T ss_pred HHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccchhhc----c-ccccceeecCccccchhccc
Confidence 88876 7999999999999999999999999999999998766322111 1 11124569999999999999
Q ss_pred chhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 151 FATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 151 ~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
.++|||.||+++||++. |..||.+-...+. +.....+.+.+.|+.+|+.++.|+.+||+.+|.+||++.++..
T Consensus 571 tASDVWMFgVCmWEIl~lGvkPfqgvkNsDV---I~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~ 644 (974)
T KOG4257|consen 571 TASDVWMFGVCMWEILSLGVKPFQGVKNSDV---IGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKA 644 (974)
T ss_pred chhhHHHHHHHHHHHHHhcCCccccccccce---EEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence 99999999999999998 9999987544332 2233457788899999999999999999999999999988753
No 310
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.2e-35 Score=229.13 Aligned_cols=214 Identities=22% Similarity=0.325 Sum_probs=165.7
Q ss_pred cEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHH
Q 042809 7 ALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYT 78 (241)
Q Consensus 7 ~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 78 (241)
..+++|.+.. ....+.+.+|++++++++|||+++ ...+..++||||+++++|.+++......++...+..++
T Consensus 34 ~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ 113 (268)
T cd05063 34 VAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGML 113 (268)
T ss_pred eEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHH
Confidence 4799998763 334567899999999999999988 66678999999999999999998765667777766655
Q ss_pred H------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCch
Q 042809 79 K------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFA 152 (241)
Q Consensus 79 ~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~ 152 (241)
. ++||+.|++|+||+|+||+++.++.++++|||++.......... ........+..|+|||.+.+..++.+
T Consensus 114 ~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~ 190 (268)
T cd05063 114 RGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGT---YTTSGGKIPIRWTAPEAIAYRKFTSA 190 (268)
T ss_pred HHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecccccccc---eeccCCCcCceecCHHHhhcCCcChH
Confidence 5 44899999999999999999999999999999986543211110 00111123457999999988888999
Q ss_pred hhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 153 TDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 153 ~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
+|+||||+++|++++ |..||............ ........+...+..+.+++.+||+.+|.+||++.++++
T Consensus 191 ~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i---~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 191 SDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAI---NDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred hHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHH---hcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 999999999999998 99999764433322222 222333344556788999999999999999999999975
No 311
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1e-35 Score=234.43 Aligned_cols=215 Identities=23% Similarity=0.343 Sum_probs=163.7
Q ss_pred CCcEEEEEeccc---hHHHHHHHHHHHHHhhc-CCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC---------
Q 042809 5 TGALFVVKSAES---EAGVQALRNEAEIRQSL-NSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG--------- 66 (241)
Q Consensus 5 ~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~--------- 66 (241)
++..+|+|.+.. ......+.+|+.+++++ +||||++ ...+..++|+||+.+|+|.+++....
T Consensus 43 ~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~ 122 (314)
T cd05099 43 QTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFD 122 (314)
T ss_pred cceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCccccccc
Confidence 456799998773 33456788999999999 5999988 45677999999999999999998642
Q ss_pred ------CCCCHHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccC
Q 042809 67 ------GTLDAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGG 134 (241)
Q Consensus 67 ------~~~~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ 134 (241)
..++...+..++. ++||++|++|+||+|+||+++.++.++|+|||.+.......... ......+
T Consensus 123 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~----~~~~~~~ 198 (314)
T cd05099 123 ITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYK----KTSNGRL 198 (314)
T ss_pred ccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEcccccccccccccccc----ccccCCC
Confidence 2355554444443 45899999999999999999999999999999997553311111 0111123
Q ss_pred cccccCcccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhcc
Q 042809 135 TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLER 213 (241)
Q Consensus 135 ~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 213 (241)
+..|+|||.+.+..++.++|+||||+++|++++ |..||............ ........+...+.++.+++.+||+.
T Consensus 199 ~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~cl~~ 275 (314)
T cd05099 199 PVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLL---REGHRMDKPSNCTHELYMLMRECWHA 275 (314)
T ss_pred CccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---HcCCCCCCCCCCCHHHHHHHHHHcCC
Confidence 457999999988889999999999999999999 89999765433333222 22333344566778899999999999
Q ss_pred CCCCCCChHHHhc
Q 042809 214 KPEKRWSAEELLN 226 (241)
Q Consensus 214 ~p~~Rps~~~~l~ 226 (241)
+|.+|||+.++++
T Consensus 276 ~p~~Rps~~~ll~ 288 (314)
T cd05099 276 VPTQRPTFKQLVE 288 (314)
T ss_pred CcccCcCHHHHHH
Confidence 9999999999875
No 312
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=9e-36 Score=228.78 Aligned_cols=212 Identities=22% Similarity=0.352 Sum_probs=163.9
Q ss_pred cEEEEEeccch-HHHHHHHHHHHHHhhcCCCcccc----cCCceeeeeecccCCCCHHHHHHHhC-CCCCHHHHHHHHHH
Q 042809 7 ALFVVKSAESE-AGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFG-GTLDAGVIRLYTKE 80 (241)
Q Consensus 7 ~~vaiK~~~~~-~~~~~~~~e~~~l~~l~h~~i~~----~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~ 80 (241)
..+|+|.+... ...+.+.+|+.++++++|+|+++ ...+..++||||+.+++|.+++.... ..++...+..++.+
T Consensus 31 ~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 110 (260)
T cd05069 31 TKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQ 110 (260)
T ss_pred ceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHH
Confidence 46889987643 33467889999999999999988 44566899999999999999998643 34666666555554
Q ss_pred ------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCchhh
Q 042809 81 ------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATD 154 (241)
Q Consensus 81 ------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~D 154 (241)
+||+.|++|+||+|+||+++.++.++|+|||.+........ .......++..|+|||...+...+.++|
T Consensus 111 l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~y~~Pe~~~~~~~~~~~D 185 (260)
T cd05069 111 IADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY-----TARQGAKFPIKWTAPEAALYGRFTIKSD 185 (260)
T ss_pred HHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcc-----cccCCCccchhhCCHHHhccCCcChHHH
Confidence 47999999999999999999999999999999865432110 1111223466799999998888999999
Q ss_pred HHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 155 IWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 155 i~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
+||||+++|++++ |..||.+........ ..........+...+..+.+++++||..+|.+|||++++++
T Consensus 186 i~slG~~l~el~t~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 186 VWSFGILLTELVTKGRVPYPGMVNREVLE---QVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCHHHHHH---HHHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 9999999999999 999997654333222 22223334455667889999999999999999999999875
No 313
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.5e-36 Score=234.53 Aligned_cols=216 Identities=22% Similarity=0.325 Sum_probs=165.7
Q ss_pred CCcEEEEEeccc---hHHHHHHHHHHHHHhhc-CCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC---------
Q 042809 5 TGALFVVKSAES---EAGVQALRNEAEIRQSL-NSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG--------- 66 (241)
Q Consensus 5 ~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~--------- 66 (241)
++..+|+|.+.. +.....+.+|+.++..+ +||||++ ...+..|+||||+.+++|.+++....
T Consensus 49 ~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~ 128 (307)
T cd05098 49 RVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYN 128 (307)
T ss_pred ccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccc
Confidence 446799999874 33456788999999999 6999988 56678999999999999999998642
Q ss_pred ------CCCCHHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccC
Q 042809 67 ------GTLDAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGG 134 (241)
Q Consensus 67 ------~~~~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ 134 (241)
..++...+..++. ++||+.|++|+||+|+||+++.++.++|+|||.+......... .......+
T Consensus 129 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~----~~~~~~~~ 204 (307)
T cd05098 129 PTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY----KKTTNGRL 204 (307)
T ss_pred cccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCcccccccccchh----hccccCCC
Confidence 1355555555544 4589999999999999999999999999999998654321100 00111223
Q ss_pred cccccCcccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhcc
Q 042809 135 TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLER 213 (241)
Q Consensus 135 ~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 213 (241)
+..|+|||.+.+..++.++|+||||+++|++++ |..||........... .........+...+.++.+++.+||..
T Consensus 205 ~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~~l~~ 281 (307)
T cd05098 205 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL---LKEGHRMDKPSNCTNELYMMMRDCWHA 281 (307)
T ss_pred ccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHH---HHcCCCCCCCCcCCHHHHHHHHHHccc
Confidence 467999999988889999999999999999998 8899876543332222 222333455666788999999999999
Q ss_pred CCCCCCChHHHhcC
Q 042809 214 KPEKRWSAEELLNH 227 (241)
Q Consensus 214 ~p~~Rps~~~~l~~ 227 (241)
+|.+|||+.+++++
T Consensus 282 ~p~~Rps~~evl~~ 295 (307)
T cd05098 282 VPSQRPTFKQLVED 295 (307)
T ss_pred ChhhCcCHHHHHHH
Confidence 99999999999865
No 314
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=5e-36 Score=235.01 Aligned_cols=223 Identities=29% Similarity=0.434 Sum_probs=166.6
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-----cC----------CceeeeeecccCCCCHHHHH
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-----NG----------EKTVNIFMEYMAGGSLLDVA 62 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-----~~----------~~~~~lv~e~~~~~~L~~~l 62 (241)
++.+|+.||+|.++.. .....+.+|+.++++++||||++ .. ...+++|+||+++ +|.+++
T Consensus 28 ~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l 106 (302)
T cd07864 28 DKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLL 106 (302)
T ss_pred ECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHH
Confidence 4567899999998632 22346778999999999999988 11 2379999999975 788877
Q ss_pred HHhCCCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcc
Q 042809 63 EKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQ 136 (241)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (241)
......++...+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||.+........ .......++.
T Consensus 107 ~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~ 181 (302)
T cd07864 107 ESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEES-----RPYTNKVITL 181 (302)
T ss_pred hcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccccccccCCcc-----cccccceecc
Confidence 7655567777777766654 7999999999999999999999999999999875433111 1111223567
Q ss_pred cccCcccccc-cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCC---------------------
Q 042809 137 LWMAPEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPH--------------------- 194 (241)
Q Consensus 137 ~~~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------- 194 (241)
.|+|||.+.+ ..++.++|+||||+++|++++|+.||....................+.
T Consensus 182 ~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (302)
T cd07864 182 WYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYR 261 (302)
T ss_pred CccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccc
Confidence 8999998865 446889999999999999999999997644332222222221111100
Q ss_pred -----CChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 195 -----FPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 195 -----~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
.....+..+.+++.+||+.+|.+|||+++++.||||
T Consensus 262 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 262 RRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred cchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 011346789999999999999999999999999997
No 315
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1e-35 Score=233.52 Aligned_cols=216 Identities=23% Similarity=0.342 Sum_probs=165.3
Q ss_pred CCcEEEEEeccc---hHHHHHHHHHHHHHhhc-CCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCC--------
Q 042809 5 TGALFVVKSAES---EAGVQALRNEAEIRQSL-NSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGG-------- 67 (241)
Q Consensus 5 ~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~-------- 67 (241)
++..||+|.... ......+.+|+.+++.+ +||||++ ......++||||+.+++|.+++.....
T Consensus 46 ~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 125 (304)
T cd05101 46 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 125 (304)
T ss_pred cceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccc
Confidence 456899998764 23456789999999999 7999988 566789999999999999999987421
Q ss_pred -------CCCHHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccC
Q 042809 68 -------TLDAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGG 134 (241)
Q Consensus 68 -------~~~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ 134 (241)
.++...+..++. ++||++|++|+||||+||+++.++.++|+|||.+......... .......+
T Consensus 126 ~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~----~~~~~~~~ 201 (304)
T cd05101 126 IARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYY----KKTTNGRL 201 (304)
T ss_pred cccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccceeccccccc----ccccCCCC
Confidence 234444444443 5589999999999999999999999999999998755331111 11112234
Q ss_pred cccccCcccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhcc
Q 042809 135 TQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLER 213 (241)
Q Consensus 135 ~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 213 (241)
++.|+|||.+.+..++.++||||||+++|++++ |..||...+........ ........+...+..+.+++.+||..
T Consensus 202 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~cl~~ 278 (304)
T cd05101 202 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL---KEGHRMDKPANCTNELYMMMRDCWHA 278 (304)
T ss_pred CceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH---HcCCcCCCCCCCCHHHHHHHHHHccc
Confidence 678999999988889999999999999999998 88888765443332222 22233344556778999999999999
Q ss_pred CCCCCCChHHHhcC
Q 042809 214 KPEKRWSAEELLNH 227 (241)
Q Consensus 214 ~p~~Rps~~~~l~~ 227 (241)
+|.+|||+.++++.
T Consensus 279 ~p~~Rps~~e~l~~ 292 (304)
T cd05101 279 IPSHRPTFKQLVED 292 (304)
T ss_pred ChhhCCCHHHHHHH
Confidence 99999999999864
No 316
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.1e-35 Score=229.12 Aligned_cols=215 Identities=23% Similarity=0.338 Sum_probs=167.2
Q ss_pred CcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHH
Q 042809 6 GALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY 77 (241)
Q Consensus 6 ~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 77 (241)
+..+|+|.+.. ....+.+.+|+.++++++||||++ ..++..++||||+++++|.+++......++......+
T Consensus 32 ~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i 111 (267)
T cd05066 32 EIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGM 111 (267)
T ss_pred ceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHH
Confidence 45799998763 334567899999999999999998 5677899999999999999999876666777776666
Q ss_pred HHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCc
Q 042809 78 TKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDF 151 (241)
Q Consensus 78 ~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ 151 (241)
+.|+ ||++|++|+||+|+||+++.++.++|+|||++.......... .......++..|+|||.+.+..++.
T Consensus 112 ~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~---~~~~~~~~~~~y~~pe~~~~~~~~~ 188 (267)
T cd05066 112 LRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA---YTTRGGKIPIRWTAPEAIAYRKFTS 188 (267)
T ss_pred HHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccccccccee---eecCCCccceeecCHhHhccCccCc
Confidence 5544 799999999999999999999999999999987553311111 0011112346799999999888999
Q ss_pred hhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 152 ATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 152 ~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
++|+||||+++|++++ |..||............ ........+...++.+.+++.+||+.+|.+|||+.++++
T Consensus 189 ~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 189 ASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAI---EEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred hhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHH---hCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 9999999999999887 99999765433322222 222233444566788999999999999999999999875
No 317
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=8.9e-36 Score=229.02 Aligned_cols=207 Identities=20% Similarity=0.294 Sum_probs=159.6
Q ss_pred CcEEEEEeccch--HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHH
Q 042809 6 GALFVVKSAESE--AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYT 78 (241)
Q Consensus 6 ~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 78 (241)
...+++|.+... .....+.+|+.++..++||||++ ..+...++||||+++++|..++......++...+..++
T Consensus 32 ~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~ 111 (262)
T cd05077 32 EIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVA 111 (262)
T ss_pred ceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHH
Confidence 446889987643 33456888999999999999998 45667899999999999999988766678888777776
Q ss_pred HHH------hhcCCccccCCCCCcEEeecCCC-------eeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 79 KEI------LHGNGILHCDLKCNNVLLGSHGD-------VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 79 ~~~------Lh~~~~vH~dl~p~Nil~~~~~~-------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
.|+ ||++|++||||+|+||+++.++. ++++|||.+..... .....++..|+|||.+.
T Consensus 112 ~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~----------~~~~~~~~~y~aPE~~~ 181 (262)
T cd05077 112 KQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLS----------RQECVERIPWIAPECVE 181 (262)
T ss_pred HHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccC----------cccccccccccChhhhc
Confidence 655 79999999999999999987664 89999998864322 11234678899999986
Q ss_pred -ccCCCchhhHHHHHHHHHHHH-hCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHH
Q 042809 146 -NEGLDFATDIWSLGCMVIEMA-TGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEE 223 (241)
Q Consensus 146 -~~~~~~~~Di~slG~~l~~l~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ 223 (241)
+..++.++||||||+++|+++ +|..||............. .........+.++.+++.+||+.+|.+||++.+
T Consensus 182 ~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~ 256 (262)
T cd05077 182 DSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYE-----GQCMLVTPSCKELADLMTHCMNYDPNQRPFFRA 256 (262)
T ss_pred CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHHh-----cCccCCCCChHHHHHHHHHHcCCChhhCcCHHH
Confidence 466888999999999999998 5888887643322221111 111222334568999999999999999999999
Q ss_pred HhcC
Q 042809 224 LLNH 227 (241)
Q Consensus 224 ~l~~ 227 (241)
++++
T Consensus 257 il~~ 260 (262)
T cd05077 257 IMRD 260 (262)
T ss_pred HHHh
Confidence 9874
No 318
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=5.9e-36 Score=238.05 Aligned_cols=230 Identities=27% Similarity=0.400 Sum_probs=167.9
Q ss_pred CCCCCcEEEEEeccc----hHHHHHHHHHHHHHhhc-CCCcccc-------cCCceeeeeecccCCCCHHHHHHHhCCCC
Q 042809 2 NKGTGALFVVKSAES----EAGVQALRNEAEIRQSL-NSPNIGR-------NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l-~h~~i~~-------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~ 69 (241)
++.+|+.+|+|.+.. ......+.+|+.++.++ +||||++ .+....++|+||+. ++|..++... .+
T Consensus 28 ~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~ 104 (337)
T cd07852 28 DRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYME-TDLHAVIRAN--IL 104 (337)
T ss_pred EcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEecccc-cCHHHHHhcC--CC
Confidence 466889999998642 33456678899999999 9999988 23446899999997 5999998763 55
Q ss_pred CHHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccc
Q 042809 70 DAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEV 143 (241)
Q Consensus 70 ~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~ 143 (241)
+......++. ++||+.|++|+||+|+||+++.++.++|+|||++.......... .........++..|+|||.
T Consensus 105 ~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~-~~~~~~~~~~~~~y~aPE~ 183 (337)
T cd07852 105 EDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENP-ENPVLTDYVATRWYRAPEI 183 (337)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccc-cCcchhcccccccccCcee
Confidence 6665555444 44899999999999999999999999999999987553321110 0112223457888999998
Q ss_pred ccc-cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhc------------------------CCC---CCC
Q 042809 144 LRN-EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACS------------------------NEK---PHF 195 (241)
Q Consensus 144 ~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~------------------------~~~---~~~ 195 (241)
+.+ ..++.++|+||||+++|++++|+.||.+............... ... ...
T Consensus 184 ~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (337)
T cd07852 184 LLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDEL 263 (337)
T ss_pred eeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhh
Confidence 865 4568899999999999999999999965432221111100000 000 011
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCc
Q 042809 196 PTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAK 235 (241)
Q Consensus 196 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~ 235 (241)
.+..+..+.+++.+||+.+|.+|||+.++++|||++.-..
T Consensus 264 ~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~ 303 (337)
T cd07852 264 LPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHN 303 (337)
T ss_pred ccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhcc
Confidence 1225678999999999999999999999999999976543
No 319
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=9.2e-36 Score=230.17 Aligned_cols=217 Identities=18% Similarity=0.295 Sum_probs=166.3
Q ss_pred CCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCcccc-----cC------CceeeeeecccCCCCHHHHHHHhC--
Q 042809 4 GTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGR-----NG------EKTVNIFMEYMAGGSLLDVAEKFG-- 66 (241)
Q Consensus 4 ~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~-----~~------~~~~~lv~e~~~~~~L~~~l~~~~-- 66 (241)
.++..||+|.+.. ......+.+|+..++.++||||++ .. ....++|+||+++++|..++....
T Consensus 25 ~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~ 104 (273)
T cd05035 25 GSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLG 104 (273)
T ss_pred CCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhcc
Confidence 3568899998763 234567899999999999999987 11 124799999999999999986531
Q ss_pred ---CCCCHHHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCccc
Q 042809 67 ---GTLDAGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL 137 (241)
Q Consensus 67 ---~~~~~~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (241)
..++...+..++.| +||+.+++|+||+|+||+++.++.++|+|||++......... .......++..
T Consensus 105 ~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~ 180 (273)
T cd05035 105 GLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYY----RQGRIAKMPVK 180 (273)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccceeeccccccc----cccccccCCcc
Confidence 24666666655554 479999999999999999999999999999998754331111 11112234567
Q ss_pred ccCcccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCC
Q 042809 138 WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPE 216 (241)
Q Consensus 138 ~~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 216 (241)
|+|||.+.+..++.++|+||||+++|++++ |..||.+...... ............+...+..+.+++.+||+.+|.
T Consensus 181 ~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 257 (273)
T cd05035 181 WIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEI---YDYLRHGNRLKQPEDCLDELYDLMYSCWRADPK 257 (273)
T ss_pred ccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHH---HHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChh
Confidence 999999988889999999999999999999 8999976443322 222233444556677888999999999999999
Q ss_pred CCCChHHHhcC
Q 042809 217 KRWSAEELLNH 227 (241)
Q Consensus 217 ~Rps~~~~l~~ 227 (241)
+|||+.+++.+
T Consensus 258 ~Rp~~~e~~~~ 268 (273)
T cd05035 258 DRPTFTKLREV 268 (273)
T ss_pred hCcCHHHHHHH
Confidence 99999999864
No 320
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.1e-35 Score=229.89 Aligned_cols=208 Identities=20% Similarity=0.319 Sum_probs=159.8
Q ss_pred CCcEEEEEeccch--HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHH
Q 042809 5 TGALFVVKSAESE--AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY 77 (241)
Q Consensus 5 ~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 77 (241)
....|++|.+... .....+.+|+.+++.++||||++ ......++||||+++++|..++....+.++...+..+
T Consensus 43 ~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i 122 (274)
T cd05076 43 RELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITV 122 (274)
T ss_pred eeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHH
Confidence 3457899988743 23456888999999999999998 4567889999999999999999876667777777766
Q ss_pred HHHH------hhcCCccccCCCCCcEEeecCC-------CeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 78 TKEI------LHGNGILHCDLKCNNVLLGSHG-------DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 78 ~~~~------Lh~~~~vH~dl~p~Nil~~~~~-------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+.|+ ||++|++||||+|+||+++..+ .++++|||.+...... ....++..|+|||.+
T Consensus 123 ~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~----------~~~~~~~~~~aPe~~ 192 (274)
T cd05076 123 AQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR----------EERVERIPWIAPECV 192 (274)
T ss_pred HHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCccccccccc----------cccccCCcccCchhh
Confidence 6654 7999999999999999997654 3799999987533221 112367789999988
Q ss_pred cc-cCCCchhhHHHHHHHHHHHH-hCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChH
Q 042809 145 RN-EGLDFATDIWSLGCMVIEMA-TGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAE 222 (241)
Q Consensus 145 ~~-~~~~~~~Di~slG~~l~~l~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 222 (241)
.+ ..++.++|+||||+++|+++ +|..||............. .....+......+.+++.+||+.+|.+|||++
T Consensus 193 ~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~ 267 (274)
T cd05076 193 PGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYE-----KKHRLPEPSCKELATLISQCLTYEPTQRPSFR 267 (274)
T ss_pred cCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHH-----hccCCCCCCChHHHHHHHHHcccChhhCcCHH
Confidence 65 55789999999999999985 6999997654333222211 12223333456799999999999999999999
Q ss_pred HHhcC
Q 042809 223 ELLNH 227 (241)
Q Consensus 223 ~~l~~ 227 (241)
+++++
T Consensus 268 ~il~~ 272 (274)
T cd05076 268 TILRD 272 (274)
T ss_pred HHHHh
Confidence 99875
No 321
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=5.4e-36 Score=234.90 Aligned_cols=214 Identities=23% Similarity=0.320 Sum_probs=162.5
Q ss_pred CCCc--EEEEEeccc---hHHHHHHHHHHHHHhhc-CCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC------
Q 042809 4 GTGA--LFVVKSAES---EAGVQALRNEAEIRQSL-NSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG------ 66 (241)
Q Consensus 4 ~~~~--~vaiK~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~------ 66 (241)
.+|. .+++|.... ......+.+|+.++.++ +|+||++ ..++..|+|+||+++++|.+++...+
T Consensus 30 ~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 109 (303)
T cd05088 30 KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP 109 (303)
T ss_pred cCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccc
Confidence 4454 457776552 33456788999999999 7999988 56778999999999999999997632
Q ss_pred ---------CCCCHHHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCcccccccc
Q 042809 67 ---------GTLDAGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQS 131 (241)
Q Consensus 67 ---------~~~~~~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 131 (241)
..++...+..++.| +||++|++||||+|+||+++.++.++|+|||++....... ....
T Consensus 110 ~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-------~~~~ 182 (303)
T cd05088 110 AFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV-------KKTM 182 (303)
T ss_pred cccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCcccchhh-------hccc
Confidence 23566666666554 4799999999999999999999999999999985322100 0111
Q ss_pred ccCcccccCcccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHh
Q 042809 132 IGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKC 210 (241)
Q Consensus 132 ~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 210 (241)
...+..|+|||.+.+..++.++||||||+++|+++| |..||.......... ..........+...+..+.+++.+|
T Consensus 183 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~~ 259 (303)
T cd05088 183 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE---KLPQGYRLEKPLNCDDEVYDLMRQC 259 (303)
T ss_pred CCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHH---HHhcCCcCCCCCCCCHHHHHHHHHH
Confidence 123567999999988888999999999999999998 999997644332222 2222223334455678899999999
Q ss_pred hccCCCCCCChHHHhcC
Q 042809 211 LERKPEKRWSAEELLNH 227 (241)
Q Consensus 211 l~~~p~~Rps~~~~l~~ 227 (241)
|+.+|.+|||+++++..
T Consensus 260 l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 260 WREKPYERPSFAQILVS 276 (303)
T ss_pred cCCChhhCcCHHHHHHH
Confidence 99999999999999875
No 322
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=7.7e-36 Score=230.39 Aligned_cols=214 Identities=23% Similarity=0.328 Sum_probs=162.0
Q ss_pred CCCCc--EEEEEeccc---hHHHHHHHHHHHHHhhc-CCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC-----
Q 042809 3 KGTGA--LFVVKSAES---EAGVQALRNEAEIRQSL-NSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG----- 66 (241)
Q Consensus 3 ~~~~~--~vaiK~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~----- 66 (241)
+++|. .+++|.... ....+.+.+|+.++.++ .||||++ ...+..++||||+++++|.+++....
T Consensus 17 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~ 96 (270)
T cd05047 17 KKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETD 96 (270)
T ss_pred cCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccc
Confidence 34454 468887763 34456788999999999 6999988 55677999999999999999997632
Q ss_pred ----------CCCCHHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccc
Q 042809 67 ----------GTLDAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQ 130 (241)
Q Consensus 67 ----------~~~~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 130 (241)
..++...+..++. ++||+.|++|+||+|+||+++.++.++|+|||++....... ...
T Consensus 97 ~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~-------~~~ 169 (270)
T cd05047 97 PAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV-------KKT 169 (270)
T ss_pred cccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCccccchhh-------hcc
Confidence 1355565555544 44899999999999999999999999999999985322110 011
Q ss_pred cccCcccccCcccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHH
Q 042809 131 SIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAK 209 (241)
Q Consensus 131 ~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 209 (241)
....+..|+|||.+.+..++.++|+||||+++|++++ |..||......... ...........+...+.++.+++.+
T Consensus 170 ~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~li~~ 246 (270)
T cd05047 170 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY---EKLPQGYRLEKPLNCDDEVYDLMRQ 246 (270)
T ss_pred CCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHH---HHHhCCCCCCCCCcCCHHHHHHHHH
Confidence 1223567999999988889999999999999999997 99999664333222 2222223334455567789999999
Q ss_pred hhccCCCCCCChHHHhc
Q 042809 210 CLERKPEKRWSAEELLN 226 (241)
Q Consensus 210 ~l~~~p~~Rps~~~~l~ 226 (241)
||..+|.+|||+++++.
T Consensus 247 ~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 247 CWREKPYERPSFAQILV 263 (270)
T ss_pred HcccChhhCCCHHHHHH
Confidence 99999999999999975
No 323
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=7.3e-36 Score=230.33 Aligned_cols=214 Identities=23% Similarity=0.338 Sum_probs=164.9
Q ss_pred CcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC------CCCCH
Q 042809 6 GALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG------GTLDA 71 (241)
Q Consensus 6 ~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~ 71 (241)
++.+++|.+... .....+.+|+.+++.++||||++ ......++|+||+++++|.+++.... ..++.
T Consensus 26 ~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 105 (269)
T cd05044 26 PIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTL 105 (269)
T ss_pred ceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccH
Confidence 468899987643 34667889999999999999988 56678999999999999999997531 23555
Q ss_pred HHHHHHHH------HHhhcCCccccCCCCCcEEeecCC-----CeeecCCCcchhhcccccCCccccccccccCcccccC
Q 042809 72 GVIRLYTK------EILHGNGILHCDLKCNNVLLGSHG-----DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMA 140 (241)
Q Consensus 72 ~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~-----~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 140 (241)
..+..++. .+||+.+++|+||+|+||+++.++ .++++|||++........ ........++..|+|
T Consensus 106 ~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~y~a 181 (269)
T cd05044 106 KELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDY----YRKEGEGLLPVRWMA 181 (269)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccc----cccCcccCCCccccC
Confidence 65555554 458999999999999999999887 899999999875432111 011112234678999
Q ss_pred cccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC
Q 042809 141 PEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW 219 (241)
Q Consensus 141 PE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 219 (241)
||.+.+..++.++|+||||+++|++++ |..||........ ............+...+..+.+++.+||..+|.+||
T Consensus 182 PE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 258 (269)
T cd05044 182 PESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEV---LQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERP 258 (269)
T ss_pred HHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHH---HHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCC
Confidence 999998889999999999999999998 9999975433222 222222333445566788999999999999999999
Q ss_pred ChHHHhc
Q 042809 220 SAEELLN 226 (241)
Q Consensus 220 s~~~~l~ 226 (241)
|++++++
T Consensus 259 ~~~~i~~ 265 (269)
T cd05044 259 TFDRIQE 265 (269)
T ss_pred CHHHHHH
Confidence 9999875
No 324
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.3e-35 Score=230.12 Aligned_cols=212 Identities=25% Similarity=0.319 Sum_probs=165.3
Q ss_pred EEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHHHH
Q 042809 8 LFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKE 80 (241)
Q Consensus 8 ~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 80 (241)
.||+|.+.. ......+.+|+.++..+.||||++ ......++++||+++|+|.+++......++...+..++.|
T Consensus 38 ~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~q 117 (279)
T cd05109 38 PVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQ 117 (279)
T ss_pred EEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHH
Confidence 589998763 334567889999999999999987 3345678999999999999999876566777777766665
Q ss_pred H------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCchhh
Q 042809 81 I------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATD 154 (241)
Q Consensus 81 ~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~D 154 (241)
+ ||++|++||||+|+||+++.++.++|+|||++......... .......++..|+|||...+..++.++|
T Consensus 118 i~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~D 193 (279)
T cd05109 118 IAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE----YHADGGKVPIKWMALESILHRRFTHQSD 193 (279)
T ss_pred HHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecccccce----eecCCCccchhhCCHHHhccCCCCchhH
Confidence 4 79999999999999999999999999999998755321110 0011122456799999998888999999
Q ss_pred HHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 155 IWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 155 i~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
|||||+++|++++ |..||............ ........+...+.++.+++.+||..+|.+|||+.+++.
T Consensus 194 i~slG~~l~el~t~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 194 VWSYGVTVWELMTFGAKPYDGIPAREIPDLL---EKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH---HCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9999999999998 99999765433332222 223334445567789999999999999999999999984
No 325
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.5e-35 Score=231.85 Aligned_cols=210 Identities=22% Similarity=0.314 Sum_probs=160.7
Q ss_pred EEEEEeccc---hHHHHHHHHHHHHHhhc-CCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC------------
Q 042809 8 LFVVKSAES---EAGVQALRNEAEIRQSL-NSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG------------ 66 (241)
Q Consensus 8 ~vaiK~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~------------ 66 (241)
.+++|.+.. ....+.+.+|+.++.++ .||||++ ...+..++|+||+++++|.+++....
T Consensus 31 ~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 110 (297)
T cd05089 31 NAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEH 110 (297)
T ss_pred eeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCCCcHHHHHHhcccccccccccccc
Confidence 467777652 33456789999999999 6999988 45677999999999999999997632
Q ss_pred ---CCCCHHHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCccc
Q 042809 67 ---GTLDAGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL 137 (241)
Q Consensus 67 ---~~~~~~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (241)
..++...+..++.| +||+.|++||||||+||+++.++.++|+|||++....... .......+..
T Consensus 111 ~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~~~~ 183 (297)
T cd05089 111 GTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYV-------KKTMGRLPVR 183 (297)
T ss_pred CccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCcccccee-------ccCCCCcCcc
Confidence 23556666655554 4799999999999999999999999999999985322110 0111123456
Q ss_pred ccCcccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCC
Q 042809 138 WMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPE 216 (241)
Q Consensus 138 ~~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 216 (241)
|+|||.+.+..++.++||||||+++|+|++ |..||.......... ..........+..++..+.+++.+||+.+|.
T Consensus 184 y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 260 (297)
T cd05089 184 WMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYE---KLPQGYRMEKPRNCDDEVYELMRQCWRDRPY 260 (297)
T ss_pred ccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH---HHhcCCCCCCCCCCCHHHHHHHHHHcCCChh
Confidence 999999988889999999999999999997 999997654433222 2222333444556778999999999999999
Q ss_pred CCCChHHHhcC
Q 042809 217 KRWSAEELLNH 227 (241)
Q Consensus 217 ~Rps~~~~l~~ 227 (241)
+|||++++++.
T Consensus 261 ~Rp~~~~i~~~ 271 (297)
T cd05089 261 ERPPFAQISVQ 271 (297)
T ss_pred hCcCHHHHHHH
Confidence 99999999764
No 326
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.2e-35 Score=227.60 Aligned_cols=215 Identities=21% Similarity=0.361 Sum_probs=167.2
Q ss_pred CCcEEEEEeccch-HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHH
Q 042809 5 TGALFVVKSAESE-AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYT 78 (241)
Q Consensus 5 ~~~~vaiK~~~~~-~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 78 (241)
++..+|+|.+... .....+.+|+++++++.|||+++ ......++|+||+++++|.+++......++...+..++
T Consensus 27 ~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ 106 (256)
T cd05112 27 EKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMC 106 (256)
T ss_pred CCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHH
Confidence 4678999987743 23457889999999999999988 56678999999999999999998765667777766665
Q ss_pred HH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCch
Q 042809 79 KE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFA 152 (241)
Q Consensus 79 ~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~ 152 (241)
.+ +||+.+++|+||+|+||+++.++.++|+|||.+....... ........++..|+|||.+.+..++.+
T Consensus 107 ~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-----~~~~~~~~~~~~~~aPe~~~~~~~~~~ 181 (256)
T cd05112 107 LDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ-----YTSSTGTKFPVKWSSPEVFSFSKYSSK 181 (256)
T ss_pred HHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCc-----ccccCCCccchhhcCHhHhccCCcChH
Confidence 54 4799999999999999999999999999999886443211 011112224567999999988889999
Q ss_pred hhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcC
Q 042809 153 TDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227 (241)
Q Consensus 153 ~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 227 (241)
+|+||||+++|++++ |..||........... .........+...+..+.+++.+||+.+|++|||+.++++.
T Consensus 182 ~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 182 SDVWSFGVLMWEVFSEGKTPYENRSNSEVVET---INAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred HHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHH---HhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 999999999999998 9999976443332222 22222333344467889999999999999999999999864
No 327
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.4e-35 Score=231.16 Aligned_cols=214 Identities=21% Similarity=0.328 Sum_probs=164.8
Q ss_pred CcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC-----------
Q 042809 6 GALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG----------- 66 (241)
Q Consensus 6 ~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~----------- 66 (241)
...+++|.+..+ .....+.+|+.++..++||||++ ..++..++|+||+.+++|.+++....
T Consensus 30 ~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 109 (290)
T cd05045 30 YTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDG 109 (290)
T ss_pred ceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCcccccccccc
Confidence 457888887632 33567889999999999999998 56677999999999999999987531
Q ss_pred ------------CCCCHHHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccc
Q 042809 67 ------------GTLDAGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQS 128 (241)
Q Consensus 67 ------------~~~~~~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 128 (241)
..++...+..++.| +||+.|++||||+|+||+++.++.++|+|||++........ ...
T Consensus 110 ~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~----~~~ 185 (290)
T cd05045 110 NRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDS----YVK 185 (290)
T ss_pred ccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCccc----hhc
Confidence 23455555555554 47999999999999999999999999999999875432111 011
Q ss_pred cccccCcccccCcccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHH
Q 042809 129 WQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFL 207 (241)
Q Consensus 129 ~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 207 (241)
.....++..|+|||.+.+..++.++||||||+++|++++ |..||.+......... .........+...+..+.+++
T Consensus 186 ~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i 262 (290)
T cd05045 186 RSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNL---LKTGYRMERPENCSEEMYNLM 262 (290)
T ss_pred ccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH---HhCCCCCCCCCCCCHHHHHHH
Confidence 112234678999999988889999999999999999998 9999976544333332 222333445566778999999
Q ss_pred HHhhccCCCCCCChHHHhc
Q 042809 208 AKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 208 ~~~l~~~p~~Rps~~~~l~ 226 (241)
.+||+.+|.+||++++++.
T Consensus 263 ~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 263 LTCWKQEPDKRPTFADISK 281 (290)
T ss_pred HHHccCCcccCCCHHHHHH
Confidence 9999999999999999875
No 328
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1.5e-35 Score=227.52 Aligned_cols=201 Identities=27% Similarity=0.460 Sum_probs=160.0
Q ss_pred HHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHh---CCCCCHHHHHHHHHHH------hhcC
Q 042809 20 VQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKF---GGTLDAGVIRLYTKEI------LHGN 85 (241)
Q Consensus 20 ~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~~------Lh~~ 85 (241)
...+.+|+.+++.++||||++ ......++|+||+++++|.+++... +..+++..+..++.|+ ||+.
T Consensus 46 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~ 125 (260)
T cd08222 46 TVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR 125 (260)
T ss_pred HHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc
Confidence 345678899999999999988 5667899999999999999988642 3457777666665544 7999
Q ss_pred CccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCchhhHHHHHHHHHHH
Q 042809 86 GILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEM 165 (241)
Q Consensus 86 ~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l 165 (241)
|++|+||+|+||+++. +.++|+|||.+....... .......+++.|+|||.+.+..++.++|+||+|+++|++
T Consensus 126 ~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l 198 (260)
T cd08222 126 RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC------DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEM 198 (260)
T ss_pred CccccCCChhheEeec-CCEeecccCceeecCCCc------ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHH
Confidence 9999999999999964 679999999886543211 111234468889999999888888999999999999999
Q ss_pred HhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 166 ATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 166 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
++|..||..... ............+..+...+.++.+++.+||..+|.+||+++++++||||
T Consensus 199 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 199 CCLAHAFEGQNF---LSVVLRIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred HhCCCCCCCccH---HHHHHHHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 999999965432 22222233345556677788899999999999999999999999999997
No 329
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1e-35 Score=228.47 Aligned_cols=215 Identities=23% Similarity=0.370 Sum_probs=166.7
Q ss_pred CCCcEEEEEeccch-HHHHHHHHHHHHHhhcCCCcccc----cCCceeeeeecccCCCCHHHHHHHh-CCCCCHHHHHHH
Q 042809 4 GTGALFVVKSAESE-AGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKF-GGTLDAGVIRLY 77 (241)
Q Consensus 4 ~~~~~vaiK~~~~~-~~~~~~~~e~~~l~~l~h~~i~~----~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~ 77 (241)
.+++.||+|.+... .....+.+|+.++++++|+||++ ...+..++|+||+.+++|.+++... +..++......+
T Consensus 28 ~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i 107 (260)
T cd05067 28 NGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDM 107 (260)
T ss_pred CCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHH
Confidence 45788999987743 33567889999999999999988 4456789999999999999998753 345666665555
Q ss_pred HH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCc
Q 042809 78 TK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDF 151 (241)
Q Consensus 78 ~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ 151 (241)
+. .+||+.|++|+||+|+||+++.++.++|+|||.+........ .......++..|+|||.+.+..++.
T Consensus 108 ~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~y~~pe~~~~~~~~~ 182 (260)
T cd05067 108 AAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY-----TAREGAKFPIKWTAPEAINYGTFTI 182 (260)
T ss_pred HHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCc-----ccccCCcccccccCHHHhccCCcCc
Confidence 44 447999999999999999999999999999999865432110 0111223467899999998888899
Q ss_pred hhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 152 ATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 152 ~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
++|+||||+++|++++ |..||.+......... .........+...+..+.+++.+||+.+|++|||+++++.
T Consensus 183 ~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 183 KSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQN---LERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred ccchHHHHHHHHHHHhCCCCCCCCCChHHHHHH---HHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 9999999999999999 9999976543332222 2223334455567789999999999999999999999875
No 330
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=4.6e-36 Score=239.02 Aligned_cols=221 Identities=25% Similarity=0.384 Sum_probs=163.3
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-----c------CCceeeeeecccCCCCHHHHHHHhC
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-----N------GEKTVNIFMEYMAGGSLLDVAEKFG 66 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-----~------~~~~~~lv~e~~~~~~L~~~l~~~~ 66 (241)
++.+|+.||+|.+... .....+.+|+.+++.++||||++ . .....++|+||+. .+|.+++.
T Consensus 36 ~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~--- 111 (342)
T cd07879 36 DKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQ-TDLQKIMG--- 111 (342)
T ss_pred eCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEecccc-cCHHHHHc---
Confidence 4678999999987632 23456789999999999999987 1 1235799999996 47776653
Q ss_pred CCCCHHHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccC
Q 042809 67 GTLDAGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMA 140 (241)
Q Consensus 67 ~~~~~~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 140 (241)
..++...+..++.| +||+.|++||||+|+||+++.++.++|+|||++..... ......++..|+|
T Consensus 112 ~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~---------~~~~~~~~~~y~a 182 (342)
T cd07879 112 HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADA---------EMTGYVVTRWYRA 182 (342)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCC---------CCCCceeeecccC
Confidence 34666666665554 47999999999999999999999999999999864322 1112346788999
Q ss_pred cccccc-cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhc-------------------CCCCCCC----
Q 042809 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACS-------------------NEKPHFP---- 196 (241)
Q Consensus 141 PE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-------------------~~~~~~~---- 196 (241)
||.+.+ ..++.++|+||||+++|++++|+.||.+............... ...+..+
T Consensus 183 PE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (342)
T cd07879 183 PEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDF 262 (342)
T ss_pred hhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchH
Confidence 999876 4578899999999999999999999976432221111111000 0001111
Q ss_pred ----hhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCc
Q 042809 197 ----TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAK 235 (241)
Q Consensus 197 ----~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~ 235 (241)
+..+..+.+++.+||+.+|.+|||+++++.||||.....
T Consensus 263 ~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 263 STLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred HHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 124567899999999999999999999999999987654
No 331
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=2.1e-35 Score=228.12 Aligned_cols=213 Identities=20% Similarity=0.318 Sum_probs=162.4
Q ss_pred EEEEEeccc----hHHHHHHHHHHHHHhhcCCCccccc-----------CCceeeeeecccCCCCHHHHHHHh-----CC
Q 042809 8 LFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGRN-----------GEKTVNIFMEYMAGGSLLDVAEKF-----GG 67 (241)
Q Consensus 8 ~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~-----------~~~~~~lv~e~~~~~~L~~~l~~~-----~~ 67 (241)
.+|+|.+.. ....+.+.+|+..++.++|+||++. .....++|+||+.+|+|.+++... ..
T Consensus 28 ~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~ 107 (272)
T cd05075 28 KVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQ 107 (272)
T ss_pred eEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcc
Confidence 689998652 3456778999999999999999871 123578999999999999988542 12
Q ss_pred CCCHHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCc
Q 042809 68 TLDAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141 (241)
Q Consensus 68 ~~~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aP 141 (241)
.++...+..++. ++||++|++||||||+||+++.++.++|+|||++........ ........+++.|+||
T Consensus 108 ~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~~~~~~~~p 183 (272)
T cd05075 108 YLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDY----YRQGRIAKMPVKWIAI 183 (272)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcccccCcccc----eecCCcccCCcccCCH
Confidence 356666655554 458999999999999999999999999999999875433111 0111223356789999
Q ss_pred ccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCC
Q 042809 142 EVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWS 220 (241)
Q Consensus 142 E~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 220 (241)
|...+..++.++|+||||+++|++++ |..||........ ............+...+..+.+++.+||+.+|.+|||
T Consensus 184 e~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 260 (272)
T cd05075 184 ESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEI---YDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPS 260 (272)
T ss_pred HHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH---HHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcC
Confidence 99998889999999999999999999 8999976433322 2222233333445567788999999999999999999
Q ss_pred hHHHhcC
Q 042809 221 AEELLNH 227 (241)
Q Consensus 221 ~~~~l~~ 227 (241)
+.++++.
T Consensus 261 ~~~l~~~ 267 (272)
T cd05075 261 FETLRCE 267 (272)
T ss_pred HHHHHHH
Confidence 9999864
No 332
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.8e-35 Score=230.41 Aligned_cols=217 Identities=20% Similarity=0.297 Sum_probs=164.6
Q ss_pred CCCCcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCC-------
Q 042809 3 KGTGALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGG------- 67 (241)
Q Consensus 3 ~~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~------- 67 (241)
..++..||+|.+... .....+.+|+.++.++.||||++ ..+...++|+||+++++|.+++.....
T Consensus 32 ~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 111 (288)
T cd05050 32 YEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLS 111 (288)
T ss_pred CCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCcccccccc
Confidence 347889999987643 33566889999999999999988 566789999999999999999985321
Q ss_pred --------------CCCHHHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCcccc
Q 042809 68 --------------TLDAGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQ 127 (241)
Q Consensus 68 --------------~~~~~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 127 (241)
.++...+..++.| +||+++++||||+|+||+++.++.++|+|||.+........ ..
T Consensus 112 ~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~----~~ 187 (288)
T cd05050 112 HSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY----YK 187 (288)
T ss_pred ccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCcc----cc
Confidence 2444445555554 47999999999999999999999999999999864322110 00
Q ss_pred ccccccCcccccCcccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHH
Q 042809 128 SWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDF 206 (241)
Q Consensus 128 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 206 (241)
.......+..|+|||.+.+..++.++|+||||+++|++++ |..||.+....... ...........+...+..+.++
T Consensus 188 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~l 264 (288)
T cd05050 188 ASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVI---YYVRDGNVLSCPDNCPLELYNL 264 (288)
T ss_pred ccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH---HHHhcCCCCCCCCCCCHHHHHH
Confidence 1111223567999999988889999999999999999998 88888654333222 2222233334455677899999
Q ss_pred HHHhhccCCCCCCChHHHhc
Q 042809 207 LAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 207 i~~~l~~~p~~Rps~~~~l~ 226 (241)
+.+||+.+|.+|||++++++
T Consensus 265 i~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 265 MRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHHHcccCcccCCCHHHHHH
Confidence 99999999999999999875
No 333
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-36 Score=238.78 Aligned_cols=218 Identities=27% Similarity=0.366 Sum_probs=164.6
Q ss_pred CCCcEEEEEeccchHH--HHHHHHHHHHHhhcCCCcccc-----cCCc-eeeeeecccCCCCHHHHHHHhCC-CCCHHHH
Q 042809 4 GTGALFVVKSAESEAG--VQALRNEAEIRQSLNSPNIGR-----NGEK-TVNIFMEYMAGGSLLDVAEKFGG-TLDAGVI 74 (241)
Q Consensus 4 ~~~~~vaiK~~~~~~~--~~~~~~e~~~l~~l~h~~i~~-----~~~~-~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~ 74 (241)
.+|..||||.+..... ..+|.+|+.++.+++|||+++ ...+ +.+||+|||++|+|.+++..... ++++...
T Consensus 97 ~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R 176 (361)
T KOG1187|consen 97 SDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETR 176 (361)
T ss_pred CCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHH
Confidence 3458999998876543 466999999999999999999 3444 69999999999999999998655 7888877
Q ss_pred HHHHH------HHhhcCC---ccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccc-cCcccccCcccc
Q 042809 75 RLYTK------EILHGNG---ILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSI-GGTQLWMAPEVL 144 (241)
Q Consensus 75 ~~~~~------~~Lh~~~---~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~aPE~~ 144 (241)
..++. +|||+.. ++|||||++|||+|.+..+||+|||++...... ....... .||.+|++||+.
T Consensus 177 ~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~------~~~~~~~~~gt~gY~~PEy~ 250 (361)
T KOG1187|consen 177 LKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEG------DTSVSTTVMGTFGYLAPEYA 250 (361)
T ss_pred HHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcc------ccceeeecCCCCccCChhhh
Confidence 77765 4589744 999999999999999999999999999543320 0011111 689999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccch---hchHHHHHHHH----------hcCCC-CCCCh-hhHHHHHHHHHH
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKI---SNAAATLLKIA----------CSNEK-PHFPT-QFFKKVLDFLAK 209 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~---~~~~~~~~~~~----------~~~~~-~~~~~-~~~~~~~~li~~ 209 (241)
..+..+.++||||||+++.|++||+.+..... ........... ..... ...+. ..-..+..+..+
T Consensus 251 ~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~ 330 (361)
T KOG1187|consen 251 STGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALR 330 (361)
T ss_pred ccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHH
Confidence 99889999999999999999999998875421 11111111001 11111 12222 344568889999
Q ss_pred hhccCCCCCCChHHHhcC
Q 042809 210 CLERKPEKRWSAEELLNH 227 (241)
Q Consensus 210 ~l~~~p~~Rps~~~~l~~ 227 (241)
|++.+|.+||++.+++..
T Consensus 331 C~~~~~~~RP~m~~Vv~~ 348 (361)
T KOG1187|consen 331 CLRPDPKERPTMSQVVKE 348 (361)
T ss_pred HcCcCCCcCcCHHHHHHH
Confidence 999999999999997643
No 334
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.8e-35 Score=228.31 Aligned_cols=214 Identities=25% Similarity=0.336 Sum_probs=167.3
Q ss_pred CcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHH
Q 042809 6 GALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYT 78 (241)
Q Consensus 6 ~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 78 (241)
...|++|..... ...+.+.+|+.++++++||||++ ..+...++||||+++++|.+++......++...+..++
T Consensus 34 ~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 113 (270)
T cd05056 34 KIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYS 113 (270)
T ss_pred CcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHH
Confidence 457899987643 34567899999999999999998 34566889999999999999998755567777777666
Q ss_pred HHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCch
Q 042809 79 KEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFA 152 (241)
Q Consensus 79 ~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~ 152 (241)
.++ ||+.|++|+||+|+||+++.++.++|+|||.+......... . .....++..|+|||.+.+..++.+
T Consensus 114 ~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~----~-~~~~~~~~~y~aPE~~~~~~~~~~ 188 (270)
T cd05056 114 YQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYY----K-ASKGKLPIKWMAPESINFRRFTSA 188 (270)
T ss_pred HHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccccce----e-cCCCCccccccChhhhccCCCCch
Confidence 544 79999999999999999999999999999998654331110 0 011223567999999988888999
Q ss_pred hhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcC
Q 042809 153 TDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227 (241)
Q Consensus 153 ~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 227 (241)
+|+||||+++|++++ |..||......... ...........+...+..+.+++.+||..+|.+|||+.+++..
T Consensus 189 ~Di~slG~il~el~~~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 189 SDVWMFGVCMWEILMLGVKPFQGVKNNDVI---GRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred hhhHHHHHHHHHHHHcCCCCCCCCCHHHHH---HHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999996 99999765433222 2222233444566778899999999999999999999998764
No 335
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=7.7e-36 Score=231.88 Aligned_cols=221 Identities=27% Similarity=0.429 Sum_probs=168.3
Q ss_pred CCCCcEEEEEeccchH---HHHHHHHHHHHHhhcCCCcccc-------cCCceeeeeecccCCCCHHHHHHHhCCCCCHH
Q 042809 3 KGTGALFVVKSAESEA---GVQALRNEAEIRQSLNSPNIGR-------NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAG 72 (241)
Q Consensus 3 ~~~~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~h~~i~~-------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 72 (241)
.++++.+|+|.+.... ....+.+|+++++.+.|+||++ ......++|+||+++++|.+++......++..
T Consensus 30 ~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~ 109 (284)
T cd05038 30 DNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLK 109 (284)
T ss_pred CCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHH
Confidence 4568899999987443 3677999999999999999988 23557999999999999999998765567777
Q ss_pred HHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 73 VIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 73 ~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
.+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||.+......... ........++..|+|||.+.+
T Consensus 110 ~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~~~~~Pe~~~~ 186 (284)
T cd05038 110 RLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDY---YYVKEPGESPIFWYAPECLRT 186 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcc---eeccCCCCCcccccCcHHHcc
Confidence 766665544 79999999999999999999999999999999765421110 011111224556999999988
Q ss_pred cCCCchhhHHHHHHHHHHHHhCCCCCccchhch------------HHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccC
Q 042809 147 EGLDFATDIWSLGCMVIEMATGRPPWGDKISNA------------AATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERK 214 (241)
Q Consensus 147 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 214 (241)
..++.++|+||||+++|++++|..|+....... ................+...+..+.+++.+||+.+
T Consensus 187 ~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~ 266 (284)
T cd05038 187 SKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAE 266 (284)
T ss_pred CCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccC
Confidence 888999999999999999999999986532221 11111222222233334556678999999999999
Q ss_pred CCCCCChHHHhc
Q 042809 215 PEKRWSAEELLN 226 (241)
Q Consensus 215 p~~Rps~~~~l~ 226 (241)
|.+|||+.++++
T Consensus 267 p~~Rpt~~ei~~ 278 (284)
T cd05038 267 PQDRPSFADLIL 278 (284)
T ss_pred hhhCCCHHHHHH
Confidence 999999999975
No 336
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=7e-36 Score=255.69 Aligned_cols=221 Identities=24% Similarity=0.255 Sum_probs=162.7
Q ss_pred CCCCCcEEEEEeccc-----hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC-----
Q 042809 2 NKGTGALFVVKSAES-----EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG----- 66 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~----- 66 (241)
|+.+|+.||+|.+.. +...+.+.+|++++.+++||||++ ..++..++||||++|++|.+++....
T Consensus 23 d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l 102 (932)
T PRK13184 23 DPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESL 102 (932)
T ss_pred ECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhcccc
Confidence 567899999999763 234567899999999999999998 56778999999999999999987521
Q ss_pred -----CCCCHHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCC------------
Q 042809 67 -----GTLDAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNG------------ 123 (241)
Q Consensus 67 -----~~~~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~------------ 123 (241)
...+...+..++. ++||++|++||||||+||+++.++.++|+|||++..........
T Consensus 103 ~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~ 182 (932)
T PRK13184 103 SKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICY 182 (932)
T ss_pred chhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccc
Confidence 1223333333333 55899999999999999999999999999999997552110000
Q ss_pred ccccccccccCcccccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCC--ChhhHH
Q 042809 124 NLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHF--PTQFFK 201 (241)
Q Consensus 124 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 201 (241)
..........||+.|+|||.+.+..++.++||||+|+++|+|++|..||.......... . .....+... ...+++
T Consensus 183 s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~--~-~~i~~P~~~~p~~~iP~ 259 (932)
T PRK13184 183 SSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISY--R-DVILSPIEVAPYREIPP 259 (932)
T ss_pred cccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhh--h-hhccChhhccccccCCH
Confidence 00011123458999999999999999999999999999999999999997643322111 1 111111111 134667
Q ss_pred HHHHHHHHhhccCCCCCCChHHHh
Q 042809 202 KVLDFLAKCLERKPEKRWSAEELL 225 (241)
Q Consensus 202 ~~~~li~~~l~~~p~~Rps~~~~l 225 (241)
.+.+++.+||+.+|++|++..+.+
T Consensus 260 ~L~~LI~rcL~~DP~kR~ss~eeL 283 (932)
T PRK13184 260 FLSQIAMKALAVDPAERYSSVQEL 283 (932)
T ss_pred HHHHHHHHHccCChhhCcCHHHHH
Confidence 899999999999999998765544
No 337
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-37 Score=245.06 Aligned_cols=224 Identities=30% Similarity=0.461 Sum_probs=185.5
Q ss_pred CCCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 1 MNKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
++++||+.||||++.+. .....+++|+.||..+.||.||. +..+.+++|||.+.|.-|.=.+.+..+++++
T Consensus 584 ~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~e 663 (888)
T KOG4236|consen 584 KHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRLPE 663 (888)
T ss_pred eecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcccchH
Confidence 36899999999998742 34578999999999999999998 8899999999999654444455566788888
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCC---CeeecCCCcchhhcccccCCccccccccccCcccccCcc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHG---DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPE 142 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE 142 (241)
..-++++.|| ||-++|+|+||||+||++.+.. .+||||||.+..+++... .....||+.|+|||
T Consensus 664 r~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF-------RrsVVGTPAYLaPE 736 (888)
T KOG4236|consen 664 RITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF-------RRSVVGTPAYLAPE 736 (888)
T ss_pred HHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhh-------hhhhcCCccccCHH
Confidence 8877777766 6999999999999999997653 599999999998877321 23567999999999
Q ss_pred cccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChH
Q 042809 143 VLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAE 222 (241)
Q Consensus 143 ~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 222 (241)
++....|...-|+||+|+++|--++|..||... +++...+.+..-..++.-...+++...+||..+|+..-.+|.|++
T Consensus 737 VLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd--EdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvd 814 (888)
T KOG4236|consen 737 VLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED--EDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVD 814 (888)
T ss_pred HHhhccccccccceeeeEEEEEEecccccCCCc--cchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchH
Confidence 999999999999999999999999999999764 344444444444444544567889999999999999999999999
Q ss_pred HHhcCCCCCCC
Q 042809 223 ELLNHTFISGN 233 (241)
Q Consensus 223 ~~l~~p~~~~~ 233 (241)
..+.|||+++.
T Consensus 815 k~lsh~Wlq~y 825 (888)
T KOG4236|consen 815 KSLSHPWLQDY 825 (888)
T ss_pred hhccchhhhcc
Confidence 99999999764
No 338
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.7e-35 Score=235.82 Aligned_cols=219 Identities=21% Similarity=0.317 Sum_probs=162.9
Q ss_pred CCCCcEEEEEeccc---hHHHHHHHHHHHHHhhc-CCCcccc------cCCceeeeeecccCCCCHHHHHHHhCC-----
Q 042809 3 KGTGALFVVKSAES---EAGVQALRNEAEIRQSL-NSPNIGR------NGEKTVNIFMEYMAGGSLLDVAEKFGG----- 67 (241)
Q Consensus 3 ~~~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~----- 67 (241)
..+++.||||.++. ......+.+|+.++.++ +||||++ ..+...++||||+++|+|.+++.....
T Consensus 34 ~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~ 113 (343)
T cd05103 34 TATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPY 113 (343)
T ss_pred cccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccc
Confidence 35688999999874 23456788999999999 5899987 334568999999999999999875321
Q ss_pred -------------------------------------------------------------CCCHHHHHHHHH------H
Q 042809 68 -------------------------------------------------------------TLDAGVIRLYTK------E 80 (241)
Q Consensus 68 -------------------------------------------------------------~~~~~~~~~~~~------~ 80 (241)
.++......++. +
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~ 193 (343)
T cd05103 114 KTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGME 193 (343)
T ss_pred cccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHH
Confidence 133333344444 4
Q ss_pred HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCchhhHHHHHH
Q 042809 81 ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGC 160 (241)
Q Consensus 81 ~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~ 160 (241)
+||++|++||||||+||+++.++.++|+|||++........ ........++..|+|||.+.+..++.++|+||||+
T Consensus 194 ~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 269 (343)
T cd05103 194 FLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD----YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 269 (343)
T ss_pred HHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcc----hhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHH
Confidence 48999999999999999999999999999999875422111 01111223456799999998888999999999999
Q ss_pred HHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcC
Q 042809 161 MVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227 (241)
Q Consensus 161 ~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 227 (241)
++|++++ |..||........ .............+...++.+.+++.+||+.+|.+|||+.++++|
T Consensus 270 ~l~el~~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 270 LLWEIFSLGASPYPGVKIDEE--FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred HHHHHHHCCCCCCCCccccHH--HHHHHhccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 9999997 9999865432211 112222233334445566789999999999999999999999976
No 339
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1e-35 Score=237.06 Aligned_cols=225 Identities=28% Similarity=0.392 Sum_probs=163.9
Q ss_pred CCCCCcEEEEEeccch--HHHHHHHHHHHHHhhcCCCcccc-----cC--------------CceeeeeecccCCCCHHH
Q 042809 2 NKGTGALFVVKSAESE--AGVQALRNEAEIRQSLNSPNIGR-----NG--------------EKTVNIFMEYMAGGSLLD 60 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~-----~~--------------~~~~~lv~e~~~~~~L~~ 60 (241)
++.+|+.||+|.+... ...+.+.+|++++++++||||++ .. ....|+|+||+. ++|.+
T Consensus 26 ~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~ 104 (342)
T cd07854 26 DSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYME-TDLAN 104 (342)
T ss_pred ECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEeeccc-ccHHH
Confidence 5678999999987632 34567889999999999999987 11 135799999997 59998
Q ss_pred HHHHhCCCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeec-CCCeeecCCCcchhhcccccCCcccccccccc
Q 042809 61 VAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGS-HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIG 133 (241)
Q Consensus 61 ~l~~~~~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~ 133 (241)
++.. ..+++..+..++.|+ ||+.|++||||+|+||+++. ++.++++|||.+.......... .......
T Consensus 105 ~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~---~~~~~~~ 179 (342)
T cd07854 105 VLEQ--GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHK---GYLSEGL 179 (342)
T ss_pred HHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccceecCCccccc---ccccccc
Confidence 8874 457777777666655 79999999999999999975 4578999999986543211111 0111234
Q ss_pred CcccccCcccccc-cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHH-------------------h--cCC
Q 042809 134 GTQLWMAPEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIA-------------------C--SNE 191 (241)
Q Consensus 134 ~~~~~~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-------------------~--~~~ 191 (241)
++..|+|||.+.+ ..++.++|+||||+++|++++|+.||............... . ...
T Consensus 180 ~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (342)
T cd07854 180 VTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGG 259 (342)
T ss_pred ccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhccc
Confidence 6788999998754 55788999999999999999999999654321111110000 0 001
Q ss_pred CCCC-----ChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCC
Q 042809 192 KPHF-----PTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISG 232 (241)
Q Consensus 192 ~~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~ 232 (241)
.... ....+.++.+++.+||+.+|.+|||+.+++.||||+.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~ 305 (342)
T cd07854 260 EPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC 305 (342)
T ss_pred ccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence 1111 1235578899999999999999999999999999974
No 340
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=2.7e-35 Score=230.17 Aligned_cols=217 Identities=20% Similarity=0.262 Sum_probs=160.7
Q ss_pred CcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC-----------
Q 042809 6 GALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG----------- 66 (241)
Q Consensus 6 ~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~----------- 66 (241)
...||+|.+.. ......+.+|++++++++|+|+++ ...+..++||||+.+++|.+++....
T Consensus 44 ~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 123 (295)
T cd05097 44 PVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNI 123 (295)
T ss_pred ceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccC
Confidence 34689998763 334567899999999999999988 56778999999999999999996532
Q ss_pred CCCCHHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccC
Q 042809 67 GTLDAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMA 140 (241)
Q Consensus 67 ~~~~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 140 (241)
..++...+..++. ++||+.|++|+||+|+||+++.++.++|+|||++....... .........++..|+|
T Consensus 124 ~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~~~~y~a 199 (295)
T cd05097 124 PSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGD----YYRIQGRAVLPIRWMA 199 (295)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCcEEecccccccccccCc----ceeccCcCcCceeecC
Confidence 1244444444444 45899999999999999999999999999999986543211 0111122334678999
Q ss_pred cccccccCCCchhhHHHHHHHHHHHHh--CCCCCccchhchHHHHHHH----HhcCCCCCCChhhHHHHHHHHHHhhccC
Q 042809 141 PEVLRNEGLDFATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKI----ACSNEKPHFPTQFFKKVLDFLAKCLERK 214 (241)
Q Consensus 141 PE~~~~~~~~~~~Di~slG~~l~~l~~--g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~li~~~l~~~ 214 (241)
||.+.+..++.++|+||||+++|++++ +..||.............. .........+...+..+.+++.+||+.+
T Consensus 200 PE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~ 279 (295)
T cd05097 200 WESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRD 279 (295)
T ss_pred hhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCC
Confidence 999988889999999999999999998 6678865433222211111 1111122234456789999999999999
Q ss_pred CCCCCChHHHhc
Q 042809 215 PEKRWSAEELLN 226 (241)
Q Consensus 215 p~~Rps~~~~l~ 226 (241)
|.+|||++++++
T Consensus 280 p~~RPs~~~i~~ 291 (295)
T cd05097 280 IKDRPTFNKIHH 291 (295)
T ss_pred chhCcCHHHHHH
Confidence 999999999975
No 341
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1.3e-35 Score=236.70 Aligned_cols=222 Identities=23% Similarity=0.341 Sum_probs=165.1
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCccccc-----------CCceeeeeecccCCCCHHHHHHHhC
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGRN-----------GEKTVNIFMEYMAGGSLLDVAEKFG 66 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~-----------~~~~~~lv~e~~~~~~L~~~l~~~~ 66 (241)
++.+|+.||+|.+... ...+.+.+|+.++++++||||++. .....+++++++ +++|.+++..
T Consensus 38 ~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~-- 114 (345)
T cd07877 38 DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC-- 114 (345)
T ss_pred EcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEehhc-ccCHHHHHhc--
Confidence 4678999999987632 234567889999999999999871 124578899888 6899888875
Q ss_pred CCCCHHHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccC
Q 042809 67 GTLDAGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMA 140 (241)
Q Consensus 67 ~~~~~~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 140 (241)
..+++..+..++.| +||+.|++|+||+|+||+++.++.++|+|||++..... ......++..|+|
T Consensus 115 ~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~---------~~~~~~~~~~y~a 185 (345)
T cd07877 115 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---------EMTGYVATRWYRA 185 (345)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccccc---------cccccccCCCccC
Confidence 35777776666554 47999999999999999999999999999999865432 1122346788999
Q ss_pred cccccc-cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhc----------------------CCCCC---
Q 042809 141 PEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACS----------------------NEKPH--- 194 (241)
Q Consensus 141 PE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~----------------------~~~~~--- 194 (241)
||.+.+ ..++.++|+||+|+++|++++|..||................. ...+.
T Consensus 186 PE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (345)
T cd07877 186 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNF 265 (345)
T ss_pred HHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcch
Confidence 999866 4578899999999999999999999965432221111100000 00000
Q ss_pred --CChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCc
Q 042809 195 --FPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAK 235 (241)
Q Consensus 195 --~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~ 235 (241)
.....++.+.++|.+||+.+|.+|||+.++++||||+....
T Consensus 266 ~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~ 308 (345)
T cd07877 266 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 308 (345)
T ss_pred hhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCC
Confidence 01124567899999999999999999999999999986443
No 342
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.3e-35 Score=226.62 Aligned_cols=214 Identities=24% Similarity=0.377 Sum_probs=166.7
Q ss_pred CCcEEEEEeccc-hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC-CCCCHHHHHHH
Q 042809 5 TGALFVVKSAES-EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG-GTLDAGVIRLY 77 (241)
Q Consensus 5 ~~~~vaiK~~~~-~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~ 77 (241)
+++.+|+|.+.. ....+.+.+|+.++++++|+||++ ..+...++||||+++++|.+++.... ..++...+..+
T Consensus 29 ~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~ 108 (261)
T cd05034 29 GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDM 108 (261)
T ss_pred CCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHH
Confidence 456789998774 344577899999999999999988 45578999999999999999998643 45677766666
Q ss_pred HHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCc
Q 042809 78 TKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDF 151 (241)
Q Consensus 78 ~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ 151 (241)
+.+ +||++|++|+||+|+||+++.++.++|+|||.+....... ........++..|+|||.+.+...+.
T Consensus 109 ~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~-----~~~~~~~~~~~~y~~PE~~~~~~~~~ 183 (261)
T cd05034 109 AAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDE-----YTAREGAKFPIKWTAPEAANYGRFTI 183 (261)
T ss_pred HHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchh-----hhhhhccCCCccccCHHHhccCCcCc
Confidence 554 4799999999999999999999999999999987554311 01111122356799999999888999
Q ss_pred hhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 152 ATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 152 ~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
++|+||+|+++|++++ |+.||.+........ ..........+...+..+.+++.+||..+|.+||+++++.+
T Consensus 184 ~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 184 KSDVWSFGILLTEIVTYGRVPYPGMTNREVLE---QVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred hhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH---HHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 9999999999999998 999997654332222 22223333445556789999999999999999999999874
No 343
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=2.1e-35 Score=234.40 Aligned_cols=225 Identities=22% Similarity=0.316 Sum_probs=165.3
Q ss_pred CcEEEEEeccch----HHHHHHHHHHHHHhhcC-CCccccc---------CCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 6 GALFVVKSAESE----AGVQALRNEAEIRQSLN-SPNIGRN---------GEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 6 ~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~-h~~i~~~---------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
+..||+|.+... ...+.+.+|+.+++++. ||||++. ....++++++|+. ++|.+++.. ...+++
T Consensus 27 ~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~-~~~~~~ 104 (332)
T cd07857 27 EETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELME-ADLHQIIRS-GQPLTD 104 (332)
T ss_pred CceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEeccc-CCHHHHHhc-CCCCCH
Confidence 889999987632 23456788999999995 9999881 1245789999995 699999876 456777
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++.|+ ||+.|++|+||+|+||+++.++.++|+|||++.......... ........|+..|+|||.+.
T Consensus 105 ~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~~~~~g~~~y~aPE~~~ 182 (332)
T cd07857 105 AHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGEN--AGFMTEYVATRWYRAPEIML 182 (332)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccccc--cccccCcccCccccCcHHHh
Confidence 7777766655 799999999999999999999999999999997543321111 11112345788999999876
Q ss_pred c-cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHH------------------------hcCCCCC---CCh
Q 042809 146 N-EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIA------------------------CSNEKPH---FPT 197 (241)
Q Consensus 146 ~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------------------------~~~~~~~---~~~ 197 (241)
+ ..++.++|+||+|+++|++++|..||............... ....... ...
T Consensus 183 ~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (332)
T cd07857 183 SFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFP 262 (332)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCC
Confidence 5 45789999999999999999999999654322111110000 0000011 112
Q ss_pred hhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCC
Q 042809 198 QFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNA 234 (241)
Q Consensus 198 ~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~ 234 (241)
..+..+.+++.+||+.+|.+|||+.+++.|||++.-.
T Consensus 263 ~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~ 299 (332)
T cd07857 263 NANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWH 299 (332)
T ss_pred CCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhc
Confidence 2457899999999999999999999999999997544
No 344
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=7.4e-36 Score=229.02 Aligned_cols=207 Identities=20% Similarity=0.322 Sum_probs=159.9
Q ss_pred CcEEEEEeccch--HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHH
Q 042809 6 GALFVVKSAESE--AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYT 78 (241)
Q Consensus 6 ~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 78 (241)
...+++|.+... ...+.+.+|+.+++.+.||||++ ..+...++||||+++|+|.+++...+..++......++
T Consensus 27 ~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~ 106 (258)
T cd05078 27 KTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVA 106 (258)
T ss_pred cchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHH
Confidence 345888887643 33467889999999999999998 45577899999999999999998766667777776666
Q ss_pred HHH------hhcCCccccCCCCCcEEeecCCC--------eeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 79 KEI------LHGNGILHCDLKCNNVLLGSHGD--------VKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 79 ~~~------Lh~~~~vH~dl~p~Nil~~~~~~--------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
.|+ ||++|++||||+|+||+++.++. ++++|||.+..... .....++..|+|||.+
T Consensus 107 ~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~----------~~~~~~~~~y~aPE~~ 176 (258)
T cd05078 107 KQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLP----------KEILLERIPWVPPECI 176 (258)
T ss_pred HHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCC----------chhccccCCccCchhc
Confidence 544 79999999999999999988765 58999998764322 1123467889999999
Q ss_pred ccc-CCCchhhHHHHHHHHHHHHhC-CCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChH
Q 042809 145 RNE-GLDFATDIWSLGCMVIEMATG-RPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAE 222 (241)
Q Consensus 145 ~~~-~~~~~~Di~slG~~l~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 222 (241)
.+. .++.++|+||||+++|++++| ..|+............ ......+...+.++.+++.+||+.+|++|||++
T Consensus 177 ~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 251 (258)
T cd05078 177 ENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFY-----EDRHQLPAPKWTELANLINQCMDYEPDFRPSFR 251 (258)
T ss_pred cCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHH-----HccccCCCCCcHHHHHHHHHHhccChhhCCCHH
Confidence 864 478899999999999999998 4666543332221111 123345555667899999999999999999999
Q ss_pred HHhcC
Q 042809 223 ELLNH 227 (241)
Q Consensus 223 ~~l~~ 227 (241)
++++.
T Consensus 252 ~il~~ 256 (258)
T cd05078 252 AIIRD 256 (258)
T ss_pred HHHHh
Confidence 99864
No 345
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=3e-35 Score=225.37 Aligned_cols=214 Identities=28% Similarity=0.449 Sum_probs=170.6
Q ss_pred CCcEEEEEeccchH---HHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCC-CCHHHHH
Q 042809 5 TGALFVVKSAESEA---GVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGT-LDAGVIR 75 (241)
Q Consensus 5 ~~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~ 75 (241)
++..||+|.+.... ..+.+.+|+..+..+.|+||++ ...+..+++|||+++++|.+++...... +++..+.
T Consensus 27 ~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~ 106 (258)
T smart00219 27 KEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLL 106 (258)
T ss_pred CCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHH
Confidence 35899999987443 5678999999999999999988 5567899999999999999999874433 7787777
Q ss_pred HHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCC
Q 042809 76 LYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGL 149 (241)
Q Consensus 76 ~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~ 149 (241)
.++.|+ ||+.|++|+||+|+||+++.++.++|+|||++........... ....++..|+|||.+.+..+
T Consensus 107 ~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-----~~~~~~~~y~~Pe~~~~~~~ 181 (258)
T smart00219 107 SFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKK-----KGGKLPIRWMAPESLKDGKF 181 (258)
T ss_pred HHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccccccc-----ccCCCcccccChHHhccCCC
Confidence 776655 7999999999999999999999999999999976544211110 01225678999999988888
Q ss_pred CchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 150 DFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 150 ~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
+.++|+||+|++++++++ |..||........ ............+...+..+.+++.+||..+|.+|||+.++++
T Consensus 182 ~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 182 TSKSDVWSFGVLLWEIFTLGESPYPGMSNEEV---LEYLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred CcchhHHHHHHHHHHHHhCCCCCCCCCCHHHH---HHHHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 999999999999999998 8898876433222 2222233444555667889999999999999999999999986
No 346
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-35 Score=204.40 Aligned_cols=226 Identities=26% Similarity=0.413 Sum_probs=181.0
Q ss_pred CCCCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 1 MNKGTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
+++.|+++||+|.++- +.......+|+-+++.++|.||++ ..+..+.+|+|||. .+|..|..+..+.++.
T Consensus 22 rn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cd-qdlkkyfdslng~~d~ 100 (292)
T KOG0662|consen 22 RNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD-QDLKKYFDSLNGDLDP 100 (292)
T ss_pred ccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhh-HHHHHHHHhcCCcCCH
Confidence 4678999999999772 233566889999999999999999 67889999999995 6999999999999999
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
+.++.+..|+ +|++++.|||+||.|.+++.+|.+|+.|||++..++-. .+.+....-|..|.+|.++.
T Consensus 101 ~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgip------vrcysaevvtlwyrppdvlf 174 (292)
T KOG0662|consen 101 EIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP------VRCYSAEVVTLWYRPPDVLF 174 (292)
T ss_pred HHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCc------eEeeeceeeeeeccCcceee
Confidence 9999998887 49999999999999999999999999999999866541 12233445688899999998
Q ss_pred ccC-CCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCC----------------CCC---------hh
Q 042809 146 NEG-LDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKP----------------HFP---------TQ 198 (241)
Q Consensus 146 ~~~-~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~----------------~~~---------~~ 198 (241)
|.+ |+...|+||.||++.|+.. |++.|.+.+.......+......... .++ +.
T Consensus 175 gakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~ 254 (292)
T KOG0662|consen 175 GAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPK 254 (292)
T ss_pred eeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhh
Confidence 865 7889999999999999998 88888776554443333322221111 111 11
Q ss_pred hHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCC
Q 042809 199 FFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233 (241)
Q Consensus 199 ~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~ 233 (241)
....-++++++++.-+|.+|++++.+++||||.+.
T Consensus 255 lns~grdllqkll~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 255 LNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred hcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence 22356899999999999999999999999999764
No 347
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.1e-36 Score=249.43 Aligned_cols=212 Identities=25% Similarity=0.257 Sum_probs=152.2
Q ss_pred HHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC----CCCCHHHHHHHHH------HHhh
Q 042809 19 GVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG----GTLDAGVIRLYTK------EILH 83 (241)
Q Consensus 19 ~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~------~~Lh 83 (241)
....+.+|+.++.+++||||++ ...+..|+|++++. ++|..++.... .......+..++. ++||
T Consensus 206 ~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH 284 (501)
T PHA03210 206 AAIQLENEILALGRLNHENILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH 284 (501)
T ss_pred HHHHHHHHHHHHHhCCCCCcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 4566889999999999999998 56678899999995 58888776422 1122333333333 5589
Q ss_pred cCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCchhhHHHHHHHHH
Q 042809 84 GNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVI 163 (241)
Q Consensus 84 ~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~ 163 (241)
++|++||||||+||+++.++.+||+|||++........ .......|+..|+|||.+.+..++.++|||||||++|
T Consensus 285 ~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 359 (501)
T PHA03210 285 DKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKERE-----AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILL 359 (501)
T ss_pred hCCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccc-----cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999975533111 1112346899999999999999999999999999999
Q ss_pred HHHhCCC-CCccchhchHHHHHHHHhc--CCCCCC----------------------------ChhhHHHHHHHHHHhhc
Q 042809 164 EMATGRP-PWGDKISNAAATLLKIACS--NEKPHF----------------------------PTQFFKKVLDFLAKCLE 212 (241)
Q Consensus 164 ~l~~g~~-p~~~~~~~~~~~~~~~~~~--~~~~~~----------------------------~~~~~~~~~~li~~~l~ 212 (241)
+|++|.. |+..........+...... .....+ ....+.++.+++.+||+
T Consensus 360 ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~ 439 (501)
T PHA03210 360 DMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLT 439 (501)
T ss_pred HHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhc
Confidence 9999775 4433222211111111100 000000 01234567888999999
Q ss_pred cCCCCCCChHHHhcCCCCCCCCcc
Q 042809 213 RKPEKRWSAEELLNHTFISGNAKK 236 (241)
Q Consensus 213 ~~p~~Rps~~~~l~~p~~~~~~~~ 236 (241)
.||.+|||+.+++.||||.....+
T Consensus 440 ~DP~~Rpsa~elL~hp~f~~~~~~ 463 (501)
T PHA03210 440 FDWHLRPGAAELLALPLFSAEEEE 463 (501)
T ss_pred cCcccCcCHHHHhhChhhhcCCch
Confidence 999999999999999999876543
No 348
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=2.6e-35 Score=223.40 Aligned_cols=219 Identities=38% Similarity=0.613 Sum_probs=172.3
Q ss_pred CCCCCcEEEEEeccchHH---HHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 2 NKGTGALFVVKSAESEAG---VQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~~---~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
+.++|..+|+|.+..... .+.+.+|++.+++++|+|+++ ......++++||+.+++|.+++.... .++...
T Consensus 10 ~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~-~~~~~~ 88 (244)
T smart00220 10 DKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRG-RLSEDE 88 (244)
T ss_pred ECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhcc-CCCHHH
Confidence 356789999999885433 678999999999999999987 45578999999999899999998743 266666
Q ss_pred HHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccccc
Q 042809 74 IRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNE 147 (241)
Q Consensus 74 ~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~ 147 (241)
...++.++ ||+.+++|+||+|+||+++.++.++++|||.+....... ......++..|+|||...+.
T Consensus 89 ~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-------~~~~~~~~~~~~~pE~~~~~ 161 (244)
T smart00220 89 ARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-------LLTTFVGTPEYMAPEVLLGK 161 (244)
T ss_pred HHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc-------ccccccCCcCCCCHHHHccC
Confidence 66555544 799999999999999999999999999999997654421 22334578889999999888
Q ss_pred CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChh--hHHHHHHHHHHhhccCCCCCCChHHHh
Q 042809 148 GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQ--FFKKVLDFLAKCLERKPEKRWSAEELL 225 (241)
Q Consensus 148 ~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~~~l~~~p~~Rps~~~~l 225 (241)
.++.++|+|++|++++++++|..||...... .................. ++..+.+++.+||..+|.+||++.+++
T Consensus 162 ~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~ 239 (244)
T smart00220 162 GYGKAVDVWSLGVILYELLTGKPPFPGDDQL--LELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEAL 239 (244)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCCcH--HHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHh
Confidence 8899999999999999999999999662111 112222211211111111 678899999999999999999999999
Q ss_pred cCCCC
Q 042809 226 NHTFI 230 (241)
Q Consensus 226 ~~p~~ 230 (241)
+||||
T Consensus 240 ~~~~~ 244 (244)
T smart00220 240 QHPFF 244 (244)
T ss_pred hCCCC
Confidence 99997
No 349
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=3.4e-35 Score=228.19 Aligned_cols=221 Identities=26% Similarity=0.406 Sum_probs=164.4
Q ss_pred CCCCCcEEEEEeccchH---HHHHHHHHHHHHhhcC-CCcccc-----cCCceeeeeecccCCCCHHHHHHHhC-CCCCH
Q 042809 2 NKGTGALFVVKSAESEA---GVQALRNEAEIRQSLN-SPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG-GTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~-h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~ 71 (241)
+..+++.|+||.+.... ......+|+..+.+++ |+|+++ ..++..++||||+ +++|.+++.... ..++.
T Consensus 20 ~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~ 98 (283)
T cd07830 20 NKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EGNLYQLMKDRKGKPFSE 98 (283)
T ss_pred ECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CCCHHHHHHhcccccCCH
Confidence 34678999999876432 2234567899999999 999988 5688999999999 789999888753 45677
Q ss_pred HHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 72 GVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 72 ~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
..+..++.|+ ||++|++|+||+|+||+++.++.++|+|||.+....... ......++..|+|||.+.
T Consensus 99 ~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~-------~~~~~~~~~~~~aPE~~~ 171 (283)
T cd07830 99 SVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP-------PYTDYVSTRWYRAPEILL 171 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCC-------CcCCCCCcccccCceeee
Confidence 7766666544 799999999999999999999999999999987543311 112234678899999885
Q ss_pred c-cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcC---------------CC-----------CCCChh
Q 042809 146 N-EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN---------------EK-----------PHFPTQ 198 (241)
Q Consensus 146 ~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~---------------~~-----------~~~~~~ 198 (241)
+ ..++.++|+||||++++++++|..||.................. .. ......
T Consensus 172 ~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (283)
T cd07830 172 RSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPN 251 (283)
T ss_pred cCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHccc
Confidence 4 45788999999999999999999999654322211110000000 00 000112
Q ss_pred hHHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 199 FFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 199 ~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
.+..+.+++++||+.+|.+|||+++++.||||
T Consensus 252 ~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 252 ASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred CCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 24679999999999999999999999999997
No 350
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=4.4e-35 Score=229.03 Aligned_cols=218 Identities=20% Similarity=0.273 Sum_probs=161.4
Q ss_pred CCcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCC---------
Q 042809 5 TGALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGG--------- 67 (241)
Q Consensus 5 ~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~--------- 67 (241)
++..+|+|.+.. ......+.+|+.+++.++|+||++ ...+..++||||+.+++|.+++.....
T Consensus 45 ~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 124 (296)
T cd05095 45 QPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADV 124 (296)
T ss_pred ceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccc
Confidence 456799999873 334567899999999999999988 566789999999999999999986421
Q ss_pred -CCCHHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccC
Q 042809 68 -TLDAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMA 140 (241)
Q Consensus 68 -~~~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 140 (241)
.++...+..++. ++||+.|++|+||||+||+++.++.++|+|||++........ ........++..|++
T Consensus 125 ~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~~~~ 200 (296)
T cd05095 125 VTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDY----YRIQGRAVLPIRWMS 200 (296)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCCCCEEeccCcccccccCCcc----eeccCcCcCccccCC
Confidence 233444555444 448999999999999999999999999999999875422110 011112234567999
Q ss_pred cccccccCCCchhhHHHHHHHHHHHHh--CCCCCccchhchHHHHHHH----HhcCCCCCCChhhHHHHHHHHHHhhccC
Q 042809 141 PEVLRNEGLDFATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKI----ACSNEKPHFPTQFFKKVLDFLAKCLERK 214 (241)
Q Consensus 141 PE~~~~~~~~~~~Di~slG~~l~~l~~--g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~li~~~l~~~ 214 (241)
||...+..++.++|+||||+++|++++ |..||.............. .........+...+..+.+++.+||+.+
T Consensus 201 pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~ 280 (296)
T cd05095 201 WESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRN 280 (296)
T ss_pred HHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCC
Confidence 999888889999999999999999998 7788865433222211111 0111112233456688999999999999
Q ss_pred CCCCCChHHHhc
Q 042809 215 PEKRWSAEELLN 226 (241)
Q Consensus 215 p~~Rps~~~~l~ 226 (241)
|.+|||+.++++
T Consensus 281 p~~Rp~~~~i~~ 292 (296)
T cd05095 281 AKERPSFQEIHA 292 (296)
T ss_pred cccCCCHHHHHH
Confidence 999999999875
No 351
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=3e-35 Score=228.87 Aligned_cols=221 Identities=28% Similarity=0.383 Sum_probs=163.5
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhc---CCCcccc-----cCCc-----eeeeeecccCCCCHHHHHHH
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSL---NSPNIGR-----NGEK-----TVNIFMEYMAGGSLLDVAEK 64 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l---~h~~i~~-----~~~~-----~~~lv~e~~~~~~L~~~l~~ 64 (241)
++.+++.||+|.+... .....+.+|+.+++++ .|+|+++ .... ..++++||+. ++|.+++..
T Consensus 20 ~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~-~~l~~~l~~ 98 (287)
T cd07838 20 DLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVD-QDLATYLSK 98 (287)
T ss_pred ECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEEehhcc-cCHHHHHHH
Confidence 3457899999998632 2234566788777766 5999988 2223 4999999997 589998876
Q ss_pred hC-CCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCccc
Q 042809 65 FG-GTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL 137 (241)
Q Consensus 65 ~~-~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (241)
.. ..+++..+..++.|+ ||+.+++|+||+|+||+++.++.++|+|||.+....... ......++..
T Consensus 99 ~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~-------~~~~~~~~~~ 171 (287)
T cd07838 99 CPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEM-------ALTSVVVTLW 171 (287)
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCCc-------cccccccccc
Confidence 43 357777777666544 799999999999999999999999999999987653311 1112236788
Q ss_pred ccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcC-------------------CC----CC
Q 042809 138 WMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN-------------------EK----PH 194 (241)
Q Consensus 138 ~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------------------~~----~~ 194 (241)
|+|||.+.+..++.++|+||+|+++|+|++|..||.................. .. ..
T Consensus 172 ~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (287)
T cd07838 172 YRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKS 251 (287)
T ss_pred ccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhh
Confidence 99999999888999999999999999999999999765433222211111000 00 00
Q ss_pred CChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 195 FPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 195 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
.....+..+.+++++||+.+|.+||++++++.||||
T Consensus 252 ~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 252 FVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred hhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 112345778999999999999999999999999997
No 352
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=5e-35 Score=225.73 Aligned_cols=219 Identities=23% Similarity=0.276 Sum_probs=157.4
Q ss_pred CCCCcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCC----CCC
Q 042809 3 KGTGALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGG----TLD 70 (241)
Q Consensus 3 ~~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~----~~~ 70 (241)
..++..+|+|.++.. .....+.+|+.++++++||||++ ......++||||+++|+|.+++..... ..+
T Consensus 19 ~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~ 98 (269)
T cd05087 19 GYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPD 98 (269)
T ss_pred CCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhccccccc
Confidence 345678999987643 23356888999999999999988 456678999999999999999976321 234
Q ss_pred HHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
...+..++. .+||+.+++|+||||+||+++.++.++|+|||.+....... .........++..|+|||.+
T Consensus 99 ~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~ 174 (269)
T cd05087 99 PTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKED----YYVTPDQLWVPLRWIAPELV 174 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcc----eeecCCCcCCcccccCHhHh
Confidence 444433333 45899999999999999999999999999999986432211 01111223467789999998
Q ss_pred ccc-------CCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHH--hcCCCCCCChhhHHHHHHHHHHhhccC
Q 042809 145 RNE-------GLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIA--CSNEKPHFPTQFFKKVLDFLAKCLERK 214 (241)
Q Consensus 145 ~~~-------~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~~ 214 (241)
.+. .++.++|+||||+++|++++ |..||............... .....+......+..+.+++++|| .+
T Consensus 175 ~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~ 253 (269)
T cd05087 175 DEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQ 253 (269)
T ss_pred ccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cC
Confidence 642 35779999999999999997 99999765433322111111 111122223345678899999999 68
Q ss_pred CCCCCChHHHhc
Q 042809 215 PEKRWSAEELLN 226 (241)
Q Consensus 215 p~~Rps~~~~l~ 226 (241)
|.+|||+++++.
T Consensus 254 P~~Rpt~~~l~~ 265 (269)
T cd05087 254 PEQRPSAEEVHL 265 (269)
T ss_pred cccCCCHHHHHH
Confidence 999999999975
No 353
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=4.6e-35 Score=236.57 Aligned_cols=219 Identities=26% Similarity=0.302 Sum_probs=164.9
Q ss_pred CCCCcEEEEEeccch---HHHHHHHHHHHHHhhcC-CCcccc-----cCCceeeeeecccCCCCHHHHHHHhCC------
Q 042809 3 KGTGALFVVKSAESE---AGVQALRNEAEIRQSLN-SPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGG------ 67 (241)
Q Consensus 3 ~~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~-h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~------ 67 (241)
..+++.||+|++... ...+.+.+|+.++.++. ||||++ ...+..++|+||+.+|+|.+++...+.
T Consensus 64 ~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~ 143 (401)
T cd05107 64 SQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYY 143 (401)
T ss_pred CCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhh
Confidence 456678999998743 23456889999999998 999988 556789999999999999999975321
Q ss_pred --------------------------------------------------------------------------------
Q 042809 68 -------------------------------------------------------------------------------- 67 (241)
Q Consensus 68 -------------------------------------------------------------------------------- 67 (241)
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (401)
T cd05107 144 LDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPER 223 (401)
T ss_pred cccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCC
Confidence
Q ss_pred -----------CCCHHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccc
Q 042809 68 -----------TLDAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQ 130 (241)
Q Consensus 68 -----------~~~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 130 (241)
.++......++. ++||+.+++||||+|+||+++.++.++|+|||++......... ....
T Consensus 224 ~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~----~~~~ 299 (401)
T cd05107 224 TRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNY----ISKG 299 (401)
T ss_pred cchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceeccccccc----ccCC
Confidence 123333333333 5589999999999999999999999999999998754221110 1111
Q ss_pred cccCcccccCcccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHH
Q 042809 131 SIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAK 209 (241)
Q Consensus 131 ~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 209 (241)
...++..|+|||.+.+..++.++|+||||+++|++++ |..||........ .......+.....+...+..+.+++.+
T Consensus 300 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~--~~~~~~~~~~~~~p~~~~~~l~~li~~ 377 (401)
T cd05107 300 STFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ--FYNAIKRGYRMAKPAHASDEIYEIMQK 377 (401)
T ss_pred CcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH--HHHHHHcCCCCCCCCCCCHHHHHHHHH
Confidence 2345778999999988888999999999999999998 8999865432221 112222233444556678899999999
Q ss_pred hhccCCCCCCChHHHhcC
Q 042809 210 CLERKPEKRWSAEELLNH 227 (241)
Q Consensus 210 ~l~~~p~~Rps~~~~l~~ 227 (241)
||..+|.+||+++++++.
T Consensus 378 cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 378 CWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred HcCCChhHCcCHHHHHHH
Confidence 999999999999999864
No 354
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-37 Score=250.53 Aligned_cols=214 Identities=23% Similarity=0.379 Sum_probs=180.4
Q ss_pred CcEEEEEecc---chHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHH
Q 042809 6 GALFVVKSAE---SEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLY 77 (241)
Q Consensus 6 ~~~vaiK~~~---~~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 77 (241)
-..||||.++ .+.....|..|+.||-++.||||++ .....+.||+|||++|+|++||+...+.+....+.-+
T Consensus 657 e~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgM 736 (996)
T KOG0196|consen 657 EITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGM 736 (996)
T ss_pred ceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHH
Confidence 3679999988 3566778999999999999999998 5677899999999999999999998888888777766
Q ss_pred HH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccC--cccccCcccccccCC
Q 042809 78 TK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGG--TQLWMAPEVLRNEGL 149 (241)
Q Consensus 78 ~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~aPE~~~~~~~ 149 (241)
++ .||-+.++|||||..+|||++++-..|++|||++...++..+... ....| +.+|.|||.+..+++
T Consensus 737 LrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~y-----tt~GGKIPiRWTAPEAIa~RKF 811 (996)
T KOG0196|consen 737 LRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAY-----TTLGGKIPIRWTAPEAIAYRKF 811 (996)
T ss_pred HHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCCccc-----cccCCccceeecChhHhhhccc
Confidence 66 558999999999999999999999999999999998766442222 12222 467999999999999
Q ss_pred CchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcC
Q 042809 150 DFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227 (241)
Q Consensus 150 ~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 227 (241)
+.++||||+|+++||.++ |..||.+..+.+..+.++ .+.+.+-|.++|..+..|+..||++|-..||++++++..
T Consensus 812 TsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe---~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 812 TSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE---QGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVST 887 (996)
T ss_pred CchhhccccceEEEEecccCCCcccccchHHHHHHHH---hccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence 999999999999999988 999999877655544444 345555677889999999999999999999999998753
No 355
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=5.7e-35 Score=226.66 Aligned_cols=215 Identities=23% Similarity=0.308 Sum_probs=166.2
Q ss_pred CCcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc------cCCceeeeeecccCCCCHHHHHHHhC-------CC
Q 042809 5 TGALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR------NGEKTVNIFMEYMAGGSLLDVAEKFG-------GT 68 (241)
Q Consensus 5 ~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~------~~~~~~~lv~e~~~~~~L~~~l~~~~-------~~ 68 (241)
++..|++|.+.. ......+.+|+.+++++.|+||++ ..+...+++++|+.+++|.+++.... ..
T Consensus 34 ~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~ 113 (280)
T cd05043 34 KEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQA 113 (280)
T ss_pred ceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccC
Confidence 478899998763 344567889999999999999988 33577899999999999999997642 34
Q ss_pred CCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcc
Q 042809 69 LDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPE 142 (241)
Q Consensus 69 ~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE 142 (241)
++...+..++.++ ||+.+++|+||+|+||+++.++.++|+|||++......... .......++..|+|||
T Consensus 114 l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~----~~~~~~~~~~~y~apE 189 (280)
T cd05043 114 LSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYH----CLGDNENRPVKWMALE 189 (280)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceE----EeCCCCCcchhccCHH
Confidence 6777666666544 79999999999999999999999999999999754321110 0111223567799999
Q ss_pred cccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCCh
Q 042809 143 VLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSA 221 (241)
Q Consensus 143 ~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~ 221 (241)
.+.+..++.++||||||+++|++++ |..||......... ...........+...+..+.+++.+||..+|++|||+
T Consensus 190 ~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~ 266 (280)
T cd05043 190 SLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMA---AYLKDGYRLAQPINCPDELFAVMACCWALDPEERPSF 266 (280)
T ss_pred HHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHH---HHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCH
Confidence 9988889999999999999999999 99999764332222 2222233333445567889999999999999999999
Q ss_pred HHHhc
Q 042809 222 EELLN 226 (241)
Q Consensus 222 ~~~l~ 226 (241)
.++++
T Consensus 267 ~~~~~ 271 (280)
T cd05043 267 SQLVQ 271 (280)
T ss_pred HHHHH
Confidence 99875
No 356
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-36 Score=218.28 Aligned_cols=231 Identities=27% Similarity=0.347 Sum_probs=185.4
Q ss_pred CCCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCcccc-------------cCCceeeeeecccCCCCHHHHHHH
Q 042809 2 NKGTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGR-------------NGEKTVNIFMEYMAGGSLLDVAEK 64 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~-------------~~~~~~~lv~e~~~~~~L~~~l~~ 64 (241)
.+.+|+.||+|..-- +.-.....+|+++|..++|+|++. .....+|+|+.+|++ +|+-++..
T Consensus 38 ~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~ceh-DLaGlLsn 116 (376)
T KOG0669|consen 38 SKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCEH-DLAGLLSN 116 (376)
T ss_pred hcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhhh-hHHHHhcC
Confidence 467888899987542 222355789999999999999865 345579999999986 99999988
Q ss_pred hCCCCCHHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccc
Q 042809 65 FGGTLDAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLW 138 (241)
Q Consensus 65 ~~~~~~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (241)
...+++...+..+.. +++|...|+|||+|+.|++++.+|.++|+|||++..+....... ........-|..|
T Consensus 117 ~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~--kprytnrvvTLwY 194 (376)
T KOG0669|consen 117 RKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVV--KPRYTNRVVTLWY 194 (376)
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccceecccccC--CCCcccceeeeec
Confidence 778899988887766 45799999999999999999999999999999997654432222 1223334458899
Q ss_pred cCccccccc-CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhh------------------
Q 042809 139 MAPEVLRNE-GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQF------------------ 199 (241)
Q Consensus 139 ~aPE~~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 199 (241)
++||.+.|. .|++..|+|+.||++.+|+|+.+.++++++......+...+....++..+.+
T Consensus 195 rppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~ 274 (376)
T KOG0669|consen 195 RPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQ 274 (376)
T ss_pred CCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcch
Confidence 999999874 5889999999999999999999999998888888888877765544322111
Q ss_pred -------------HHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCc
Q 042809 200 -------------FKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAK 235 (241)
Q Consensus 200 -------------~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~ 235 (241)
.++..+|+.+++..||.+|+++++++.|.||...+.
T Consensus 275 ~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~ 323 (376)
T KOG0669|consen 275 KRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPM 323 (376)
T ss_pred hhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCc
Confidence 136789999999999999999999999999976654
No 357
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8e-35 Score=231.25 Aligned_cols=216 Identities=22% Similarity=0.334 Sum_probs=164.9
Q ss_pred CcEEEEEeccc---hHHHHHHHHHHHHHhhc-CCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC----------
Q 042809 6 GALFVVKSAES---EAGVQALRNEAEIRQSL-NSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG---------- 66 (241)
Q Consensus 6 ~~~vaiK~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~---------- 66 (241)
+..||+|.+.. ....+.+.+|+.+++++ +||||++ ...+..++++||+.+|+|.+++....
T Consensus 44 ~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~ 123 (334)
T cd05100 44 PVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDT 123 (334)
T ss_pred ceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCccccccccc
Confidence 34789998774 33457789999999999 7999988 55668999999999999999998632
Q ss_pred -----CCCCHHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCc
Q 042809 67 -----GTLDAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGT 135 (241)
Q Consensus 67 -----~~~~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~ 135 (241)
..++...+..++. .+||++|++||||+|+||+++.++.++|+|||++......... .......++
T Consensus 124 ~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~----~~~~~~~~~ 199 (334)
T cd05100 124 CKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYY----KKTTNGRLP 199 (334)
T ss_pred ccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCcccceeccccccc----ccccCCCcC
Confidence 1244444444444 4489999999999999999999999999999998754331110 011112234
Q ss_pred ccccCcccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccC
Q 042809 136 QLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERK 214 (241)
Q Consensus 136 ~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 214 (241)
..|+|||.+.+..++.++|+||||+++|++++ |..||............ ........+...+..+.+++.+||+.+
T Consensus 200 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~cl~~~ 276 (334)
T cd05100 200 VKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLL---KEGHRMDKPANCTHELYMIMRECWHAV 276 (334)
T ss_pred ceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH---HcCCCCCCCCCCCHHHHHHHHHHcccC
Confidence 67999999998889999999999999999998 88999765443332222 223334455567788999999999999
Q ss_pred CCCCCChHHHhcCC
Q 042809 215 PEKRWSAEELLNHT 228 (241)
Q Consensus 215 p~~Rps~~~~l~~p 228 (241)
|.+|||+.+++.+.
T Consensus 277 p~~Rps~~ell~~l 290 (334)
T cd05100 277 PSQRPTFKQLVEDL 290 (334)
T ss_pred hhhCcCHHHHHHHH
Confidence 99999999998763
No 358
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=8.3e-35 Score=228.21 Aligned_cols=213 Identities=23% Similarity=0.342 Sum_probs=163.6
Q ss_pred EEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHHHH
Q 042809 8 LFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKE 80 (241)
Q Consensus 8 ~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 80 (241)
.+|+|.+... .....+.+|+.+++.+.||||++ ......++++||+++|+|.+++......++...+..++.|
T Consensus 38 ~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~q 117 (303)
T cd05110 38 PVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQ 117 (303)
T ss_pred eEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHH
Confidence 5788887643 23446889999999999999998 2334577999999999999999876556777776666654
Q ss_pred H------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCchhh
Q 042809 81 I------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATD 154 (241)
Q Consensus 81 ~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~D 154 (241)
+ ||++|++|+||+|+||+++.++.+||+|||++......... .......++..|+|||.+.+..++.++|
T Consensus 118 i~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~D 193 (303)
T cd05110 118 IAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE----YNADGGKMPIKWMALECIHYRKFTHQSD 193 (303)
T ss_pred HHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCcccc----cccCCCccccccCCHHHhccCCCChHHH
Confidence 4 79999999999999999999999999999999755321110 1111223467899999999888999999
Q ss_pred HHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcC
Q 042809 155 IWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227 (241)
Q Consensus 155 i~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 227 (241)
|||||+++|++++ |..||.+.......... ........+...+.++.+++.+||..+|.+||+++++++.
T Consensus 194 iwslG~~l~el~t~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 194 VWSYGVTIWELMTFGGKPYDGIPTREIPDLL---EKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---HCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999998 99999764333332222 2233333445566789999999999999999999998764
No 359
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1e-34 Score=222.90 Aligned_cols=214 Identities=22% Similarity=0.389 Sum_probs=163.5
Q ss_pred CCcEEEEEeccch-HHHHHHHHHHHHHhhcCCCcccc----cCCceeeeeecccCCCCHHHHHHHh-CCCCCHHHHHHHH
Q 042809 5 TGALFVVKSAESE-AGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKF-GGTLDAGVIRLYT 78 (241)
Q Consensus 5 ~~~~vaiK~~~~~-~~~~~~~~e~~~l~~l~h~~i~~----~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ 78 (241)
.+..+++|.+... ...+.+.+|+.++++++|+||++ ......+++|||+++++|.+++... +...+...+..++
T Consensus 29 ~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 108 (260)
T cd05073 29 KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS 108 (260)
T ss_pred CCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHH
Confidence 4566889987643 34567899999999999999988 3336789999999999999999864 3345555554444
Q ss_pred H------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCch
Q 042809 79 K------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFA 152 (241)
Q Consensus 79 ~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~ 152 (241)
. ++||+.|++|+||+|+||+++.++.++|+|||.+........ .......++..|+|||.+.+..++.+
T Consensus 109 ~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~ 183 (260)
T cd05073 109 AQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-----TAREGAKFPIKWTAPEAINFGSFTIK 183 (260)
T ss_pred HHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCc-----ccccCCcccccccCHhHhccCCcCcc
Confidence 4 448999999999999999999999999999999875433111 11111234567999999988888999
Q ss_pred hhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 153 TDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 153 ~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
+|+||||+++|++++ |..||............ ........+...+..+.+++.+||+.+|.+||++.+++.
T Consensus 184 ~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 184 SDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL---ERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred ccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHH---hCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 999999999999999 99999765433322222 223333445567788999999999999999999998864
No 360
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=8.4e-35 Score=223.15 Aligned_cols=204 Identities=22% Similarity=0.322 Sum_probs=158.5
Q ss_pred cEEEEEeccchHH-HHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHHHH
Q 042809 7 ALFVVKSAESEAG-VQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKE 80 (241)
Q Consensus 7 ~~vaiK~~~~~~~-~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 80 (241)
..+++|.+..... ...+.+|+.++++++||||++ .. ...++|+||+++++|.+++......++...+..++.|
T Consensus 31 ~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 109 (259)
T cd05037 31 VSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQ 109 (259)
T ss_pred eeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHH
Confidence 4678887764433 677899999999999999988 23 6789999999999999999876556777777766665
Q ss_pred H------hhcCCccccCCCCCcEEeecCC-------CeeecCCCcchhhcccccCCccccccccccCcccccCccccccc
Q 042809 81 I------LHGNGILHCDLKCNNVLLGSHG-------DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNE 147 (241)
Q Consensus 81 ~------Lh~~~~vH~dl~p~Nil~~~~~-------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~ 147 (241)
+ ||++|++|+||+|+||+++.++ .++|+|||++..... .....++..|+|||.+.+.
T Consensus 110 i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~----------~~~~~~~~~y~aPE~~~~~ 179 (259)
T cd05037 110 LASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS----------REERVERIPWIAPECIRNG 179 (259)
T ss_pred HHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccccc----------ccccccCCCccChhhhcCC
Confidence 4 7999999999999999999887 799999999875432 1122356779999999876
Q ss_pred --CCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHH
Q 042809 148 --GLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224 (241)
Q Consensus 148 --~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 224 (241)
.++.++|+||||+++|++++ |..||............. .....+......+.+++.+||..+|.+|||+.++
T Consensus 180 ~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i 254 (259)
T cd05037 180 QASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ-----DQHRLPMPDCAELANLINQCWTYDPTKRPSFRAI 254 (259)
T ss_pred CCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh-----cCCCCCCCCchHHHHHHHHHhccChhhCCCHHHH
Confidence 78899999999999999999 688886653222222111 1111222223789999999999999999999999
Q ss_pred hc
Q 042809 225 LN 226 (241)
Q Consensus 225 l~ 226 (241)
++
T Consensus 255 l~ 256 (259)
T cd05037 255 LR 256 (259)
T ss_pred HH
Confidence 86
No 361
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-36 Score=230.77 Aligned_cols=220 Identities=25% Similarity=0.462 Sum_probs=178.0
Q ss_pred CCCCCcEEEEEeccchH-----HHHHHHHHHHHHhhcCCC-cccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 2 NKGTGALFVVKSAESEA-----GVQALRNEAEIRQSLNSP-NIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l~h~-~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
.+.|...||||+++++. ..+--..|-++|.....| .++. +.-+.+|.||||++||+|--.++.. +.+.
T Consensus 370 rkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ~-GkFK 448 (683)
T KOG0696|consen 370 RKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQV-GKFK 448 (683)
T ss_pred ccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEecCchhhhHHHHh-cccC
Confidence 36778899999988542 234455676777755544 4444 7888999999999999999999874 5677
Q ss_pred HHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
+..+..++.++ ||++||++||||.+||+++.+|.+||.|||+++.- .........++|||.|+|||++
T Consensus 449 Ep~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEn------i~~~~TTkTFCGTPdYiAPEIi 522 (683)
T KOG0696|consen 449 EPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN------IFDGVTTKTFCGTPDYIAPEII 522 (683)
T ss_pred CchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeeccccccc------ccCCcceeeecCCCcccccceE
Confidence 77777777655 89999999999999999999999999999999631 1112334578899999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC-----
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW----- 219 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp----- 219 (241)
...+|+.++|.||+|++||||+.|+.||.+.+++.....+. ...-.+|..++.++.++.+..|.+.|.+|.
T Consensus 523 ~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~----ehnvsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ 598 (683)
T KOG0696|consen 523 AYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIM----EHNVSYPKSLSKEAVAICKGLLTKHPGKRLGCGPE 598 (683)
T ss_pred EecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH----HccCcCcccccHHHHHHHHHHhhcCCccccCCCCc
Confidence 99999999999999999999999999999876655443333 344567889999999999999999999997
Q ss_pred ChHHHhcCCCCCC
Q 042809 220 SAEELLNHTFISG 232 (241)
Q Consensus 220 s~~~~l~~p~~~~ 232 (241)
.-.++-.||||+.
T Consensus 599 ge~di~~H~FFR~ 611 (683)
T KOG0696|consen 599 GERDIREHPFFRR 611 (683)
T ss_pred cccchhhCcchhh
Confidence 3467899999975
No 362
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.4e-34 Score=223.17 Aligned_cols=218 Identities=22% Similarity=0.281 Sum_probs=155.9
Q ss_pred CCcEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCC----CCHH
Q 042809 5 TGALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGT----LDAG 72 (241)
Q Consensus 5 ~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~----~~~~ 72 (241)
....+++|.+... .....+.+|+..++.++|+||++ ......++||||+++|+|.+++...... .+..
T Consensus 21 ~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~ 100 (269)
T cd05042 21 SKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKD 100 (269)
T ss_pred CCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHH
Confidence 4567888876532 33456789999999999999988 5667899999999999999999874321 2344
Q ss_pred HHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 73 VIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 73 ~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
.+..++. ++||++|++||||||+||+++.++.++|+|||++....... .........++..|+|||.+..
T Consensus 101 ~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~ 176 (269)
T cd05042 101 VLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPED----YYITKDCHAVPLRWLAPELVEI 176 (269)
T ss_pred HHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccch----heeccCCCCCcccccCHHHHhh
Confidence 4444443 55899999999999999999999999999999885432110 0001122234677999998743
Q ss_pred -------cCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHh--cCCCCCCChhhHHHHHHHHHHhhccCCC
Q 042809 147 -------EGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIAC--SNEKPHFPTQFFKKVLDFLAKCLERKPE 216 (241)
Q Consensus 147 -------~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~ 216 (241)
..++.++|+||||+++|++++ |..||................ ....+..+...+..+.+++..|| .+|.
T Consensus 177 ~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~ 255 (269)
T cd05042 177 RGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPE 255 (269)
T ss_pred ccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcc
Confidence 346789999999999999999 888987653322211111111 11122334456778889999998 5999
Q ss_pred CCCChHHHhcC
Q 042809 217 KRWSAEELLNH 227 (241)
Q Consensus 217 ~Rps~~~~l~~ 227 (241)
+|||++++++-
T Consensus 256 ~Rpt~~~v~~~ 266 (269)
T cd05042 256 TRPTAEEVHEL 266 (269)
T ss_pred cccCHHHHHHH
Confidence 99999999763
No 363
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.2e-34 Score=224.24 Aligned_cols=217 Identities=21% Similarity=0.333 Sum_probs=167.2
Q ss_pred CCCcEEEEEeccchH---HHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCC--------
Q 042809 4 GTGALFVVKSAESEA---GVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGG-------- 67 (241)
Q Consensus 4 ~~~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~-------- 67 (241)
.+.+.+++|.+.... ..+.+.+|++++.+++|+||++ ......++||||+++++|.+++.....
T Consensus 33 ~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~ 112 (275)
T cd05046 33 GGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPP 112 (275)
T ss_pred CCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEecCCCcHHHHHHhccccccccccc
Confidence 356789999876432 3577999999999999999988 556789999999999999999986431
Q ss_pred CCCHHHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCc
Q 042809 68 TLDAGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141 (241)
Q Consensus 68 ~~~~~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aP 141 (241)
.++...+..++.| +||+.+++|+||+|+||+++.++.++++|||++....... ........++..|+||
T Consensus 113 ~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~y~~P 187 (275)
T cd05046 113 PLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSE-----YYKLRNALIPLRWLAP 187 (275)
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccccccCccc-----ccccCCceeEEeecCh
Confidence 4677777766654 4899999999999999999999999999999886432211 1111223356779999
Q ss_pred ccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCC
Q 042809 142 EVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWS 220 (241)
Q Consensus 142 E~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 220 (241)
|.+.+...+.++|+||||+++|++++ |..||............. ........+...+..+.+++.+||+.+|.+|||
T Consensus 188 E~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~ 265 (275)
T cd05046 188 EAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQ--AGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPS 265 (275)
T ss_pred hhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHH--cCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCC
Confidence 99988888899999999999999998 888996643333222211 112222334557789999999999999999999
Q ss_pred hHHHhcC
Q 042809 221 AEELLNH 227 (241)
Q Consensus 221 ~~~~l~~ 227 (241)
+.+++..
T Consensus 266 ~~~~l~~ 272 (275)
T cd05046 266 FSELVSA 272 (275)
T ss_pred HHHHHHH
Confidence 9999864
No 364
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.7e-36 Score=241.38 Aligned_cols=229 Identities=24% Similarity=0.431 Sum_probs=179.2
Q ss_pred CCCCcEEEEEeccchHHH-----HHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHH
Q 042809 3 KGTGALFVVKSAESEAGV-----QALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAG 72 (241)
Q Consensus 3 ~~~~~~vaiK~~~~~~~~-----~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 72 (241)
.+|.+.||+|.+++.+.. .-...|-.||.....+-||+ ++.+++|+||+|++||++-++|... +.|++.
T Consensus 651 vDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrm-gIFeE~ 729 (1034)
T KOG0608|consen 651 VDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRM-GIFEED 729 (1034)
T ss_pred cchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCccHHHHHHHh-ccCHHH
Confidence 456888899988865433 23678999999999999998 8899999999999999999999874 678899
Q ss_pred HHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCC-----------------------
Q 042809 73 VIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNG----------------------- 123 (241)
Q Consensus 73 ~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~----------------------- 123 (241)
.+++++.++ +|..|++||||||+|||+|.+|.+||+|||+++.+..-....
T Consensus 730 LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~ 809 (1034)
T KOG0608|consen 730 LARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADIS 809 (1034)
T ss_pred HHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhcccc
Confidence 999888755 799999999999999999999999999999998542210000
Q ss_pred -------------ccccccccccCcccccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcC
Q 042809 124 -------------NLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN 190 (241)
Q Consensus 124 -------------~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 190 (241)
..........||+.|+|||++....++..+|.|+.|++||+|+.|++||...+.......+.+....
T Consensus 810 ~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~ 889 (1034)
T KOG0608|consen 810 KCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNF 889 (1034)
T ss_pred ccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhc
Confidence 0000112456899999999999999999999999999999999999999876655444333333333
Q ss_pred CCCCCChhhHHHHHHHHHHhhccCCCCCC---ChHHHhcCCCCCCC
Q 042809 191 EKPHFPTQFFKKVLDFLAKCLERKPEKRW---SAEELLNHTFISGN 233 (241)
Q Consensus 191 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~~l~~p~~~~~ 233 (241)
........++.++.++|.++.. +++.|. ..+++..||||++-
T Consensus 890 l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaHpfFkgI 934 (1034)
T KOG0608|consen 890 LHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAHPFFKGI 934 (1034)
T ss_pred cccccccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcCcccccc
Confidence 3333445678899999988653 577787 56679999999763
No 365
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.2e-34 Score=223.24 Aligned_cols=213 Identities=24% Similarity=0.321 Sum_probs=166.6
Q ss_pred cEEEEEeccch---HHHHHHHHHHHHHhhcCCCcccc----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHHH
Q 042809 7 ALFVVKSAESE---AGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTK 79 (241)
Q Consensus 7 ~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 79 (241)
..+|+|..... .....+.+|+.++.+++||||++ ......++|+||+.+|+|.+++......+++..+..++.
T Consensus 37 ~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~ 116 (279)
T cd05057 37 IPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCV 116 (279)
T ss_pred eEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHH
Confidence 36899987643 34567889999999999999988 233789999999999999999988666788888777766
Q ss_pred HH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCchh
Q 042809 80 EI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFAT 153 (241)
Q Consensus 80 ~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~ 153 (241)
|+ ||+.|++|+||+|+||+++.++.++|+|||.+.......... ......++..|+|||.+....++.++
T Consensus 117 qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~ 192 (279)
T cd05057 117 QIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEY----HAEGGKVPIKWMALESILHRIYTHKS 192 (279)
T ss_pred HHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcccce----ecCCCcccccccCHHHhhcCCcCchh
Confidence 55 799999999999999999999999999999997553211100 01112235679999999888889999
Q ss_pred hHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 154 DIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 154 Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
|+||||+++|++++ |..||........... .........+...+..+.+++.+||..+|.+|||+.+++.
T Consensus 193 Di~slG~~l~el~~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 193 DVWSYGVTVWELMTFGAKPYEGIPAVEIPDL---LEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred hHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH---HhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99999999999998 9999976543333222 2223334445556778999999999999999999998764
No 366
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-36 Score=228.99 Aligned_cols=223 Identities=24% Similarity=0.338 Sum_probs=172.0
Q ss_pred CCCCCcEEEEEeccc-hHHHHHHHHHHHHHhhcC--CCcc----cc-----cCCceeeeeecccCCCCHHHHHHHh-CCC
Q 042809 2 NKGTGALFVVKSAES-EAGVQALRNEAEIRQSLN--SPNI----GR-----NGEKTVNIFMEYMAGGSLLDVAEKF-GGT 68 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~-~~~~~~~~~e~~~l~~l~--h~~i----~~-----~~~~~~~lv~e~~~~~~L~~~l~~~-~~~ 68 (241)
|.+++..||+|++++ ....+...-|++.+.++. -|+= +. +..++.|+|+|.+ |.++++++... -.+
T Consensus 110 D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~ 188 (415)
T KOG0671|consen 110 DRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIP 188 (415)
T ss_pred ecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc-ChhHHHHhccCCccc
Confidence 667799999999885 344566778899999884 2221 11 7889999999999 67999999984 357
Q ss_pred CCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecC--------------------CCeeecCCCcchhhcccccC
Q 042809 69 LDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSH--------------------GDVKLPDLGCARRVNDLKNN 122 (241)
Q Consensus 69 ~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~--------------------~~~kl~dfg~~~~~~~~~~~ 122 (241)
++...++.++.|+ ||+.+++|.||||+||++.+. ..++++|||.++...+
T Consensus 189 fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e---- 264 (415)
T KOG0671|consen 189 FPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHE---- 264 (415)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceecc----
Confidence 8999999999887 699999999999999999532 1288999999975443
Q ss_pred CccccccccccCcccccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCC-------
Q 042809 123 GNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHF------- 195 (241)
Q Consensus 123 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~------- 195 (241)
.......|..|+|||++.+-.++..+||||+||+|+|++||...|+..++.....+.+......+..+
T Consensus 265 -----~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~ 339 (415)
T KOG0671|consen 265 -----HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKE 339 (415)
T ss_pred -----CcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhH
Confidence 12345579999999999999999999999999999999999999987654443323222221111100
Q ss_pred -------------------------C----------hhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCC
Q 042809 196 -------------------------P----------TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNA 234 (241)
Q Consensus 196 -------------------------~----------~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~ 234 (241)
+ .....++.+|+++||..||.+|+|+.|++.||||+...
T Consensus 340 Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~ 413 (415)
T KOG0671|consen 340 KYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARLT 413 (415)
T ss_pred hhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcCC
Confidence 0 01123689999999999999999999999999998754
No 367
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-35 Score=236.54 Aligned_cols=215 Identities=23% Similarity=0.367 Sum_probs=174.8
Q ss_pred CCCcEEEEEeccch-HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCC-CCHHHHHH
Q 042809 4 GTGALFVVKSAESE-AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGT-LDAGVIRL 76 (241)
Q Consensus 4 ~~~~~vaiK~~~~~-~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~ 76 (241)
+....||||.++.+ -..++|..|+.+|+.++|||+|+ ..+..+|||+|||..|+|.+|++++... ++...+..
T Consensus 290 kyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLly 369 (1157)
T KOG4278|consen 290 KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLY 369 (1157)
T ss_pred ccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHH
Confidence 44567899988844 45788999999999999999988 6778899999999999999999997543 44444445
Q ss_pred HHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCC
Q 042809 77 YTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLD 150 (241)
Q Consensus 77 ~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~ 150 (241)
++.| ||..++++||||...|||+..+..+|+.|||++....... ...+....-.+-|.|||.+....++
T Consensus 370 MAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDT-----YTAHAGAKFPIKWTAPEsLAyNtFS 444 (1157)
T KOG4278|consen 370 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDT-----YTAHAGAKFPIKWTAPESLAYNTFS 444 (1157)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCc-----eecccCccCcccccCcccccccccc
Confidence 5544 4899999999999999999999999999999998665422 2222223345679999999999999
Q ss_pred chhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 151 FATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 151 ~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
.++|||+||++||||.| |..||.+-+. .........+.+-..|..+++.+++|+++||+.+|.+||+++++-+
T Consensus 445 iKSDVWAFGVLLWEIATYGMsPYPGidl---SqVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHq 518 (1157)
T KOG4278|consen 445 IKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQ 518 (1157)
T ss_pred cchhhHHHHHHHHHHHhcCCCCCCCccH---HHHHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHH
Confidence 99999999999999999 9999987433 3344444556666677889999999999999999999999998743
No 368
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-35 Score=235.29 Aligned_cols=217 Identities=19% Similarity=0.238 Sum_probs=171.2
Q ss_pred CcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCC-CHHHHHH
Q 042809 6 GALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL-DAGVIRL 76 (241)
Q Consensus 6 ~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~-~~~~~~~ 76 (241)
+..||+|.++. ......|.+|+++|.+++||||+. ..++.+++|+|||+.|+|..|+.....+. +.+....
T Consensus 562 ~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vs 641 (807)
T KOG1094|consen 562 PLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVS 641 (807)
T ss_pred ceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHH
Confidence 47899999884 345678999999999999999998 67889999999999999999999863332 2222223
Q ss_pred HHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCC
Q 042809 77 YTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLD 150 (241)
Q Consensus 77 ~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~ 150 (241)
++. .||.+.++|||||.+.||+++.++++||+|||++...-.. ...+.-....-+.+|+|+|.+.-++++
T Consensus 642 i~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg----~yy~vqgr~vlpiRwmawEsillgkFt 717 (807)
T KOG1094|consen 642 ICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSG----DYYRVQGRAVLPIRWMAWESILLGKFT 717 (807)
T ss_pred HHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccC----CceeeecceeeeeeehhHHHHHhcccc
Confidence 333 5589999999999999999999999999999999854221 111222223346889999999999999
Q ss_pred chhhHHHHHHHHHHHHh--CCCCCccchhchHHHHHHHHhcCC----CCCCChhhHHHHHHHHHHhhccCCCCCCChHHH
Q 042809 151 FATDIWSLGCMVIEMAT--GRPPWGDKISNAAATLLKIACSNE----KPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224 (241)
Q Consensus 151 ~~~Di~slG~~l~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 224 (241)
.++|+|+||+++||+++ ...||...+++...+......... .+..|..++..+.+++.+||+.+..+|||++++
T Consensus 718 taSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~l 797 (807)
T KOG1094|consen 718 TASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQL 797 (807)
T ss_pred chhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHH
Confidence 99999999999999887 789998876666554444333222 224567788899999999999999999999998
Q ss_pred hc
Q 042809 225 LN 226 (241)
Q Consensus 225 l~ 226 (241)
..
T Consensus 798 h~ 799 (807)
T KOG1094|consen 798 HL 799 (807)
T ss_pred HH
Confidence 64
No 369
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-36 Score=217.06 Aligned_cols=226 Identities=29% Similarity=0.387 Sum_probs=174.4
Q ss_pred CCCCCCcEEEEEeccc---hHHHHHHHHHHHHHhhc-CCCcccc-----cCCceeeeeecccCCCCHHHHHHH----hCC
Q 042809 1 MNKGTGALFVVKSAES---EAGVQALRNEAEIRQSL-NSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEK----FGG 67 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~----~~~ 67 (241)
+++.+|+.+|||.++. +...+++..|.+...+- ++||||+ ..++.-|+.||.|+ .+|+.+.+. ...
T Consensus 84 ~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd-~SlDklYk~vy~vq~~ 162 (361)
T KOG1006|consen 84 LHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD-ISLDKLYKRVYSVQKS 162 (361)
T ss_pred hcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-hhHHHHHHHHHHHHhc
Confidence 4789999999999884 34567788888776555 5999999 78889999999995 577665432 234
Q ss_pred CCCHHHHHHHH------HHHh-hcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccC
Q 042809 68 TLDAGVIRLYT------KEIL-HGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMA 140 (241)
Q Consensus 68 ~~~~~~~~~~~------~~~L-h~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 140 (241)
.+++..+..++ +.+| ...+++|||+||+||+++..|.+||||||++....+.- ......|...|+|
T Consensus 163 ~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~Si-------AkT~daGCrpYmA 235 (361)
T KOG1006|consen 163 RIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSI-------AKTVDAGCRPYMA 235 (361)
T ss_pred cCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHH-------HhhhccCCccccC
Confidence 56666655443 3445 46789999999999999999999999999998665521 2223457889999
Q ss_pred cccccc--cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCC-----hhhHHHHHHHHHHhhcc
Q 042809 141 PEVLRN--EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFP-----TQFFKKVLDFLAKCLER 213 (241)
Q Consensus 141 PE~~~~--~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~~l~~ 213 (241)
||.+.. ..|+.++|+||||+++||+.||..|+..... ..+.+.+...+.++.+. ...+..+..+|.-|+.+
T Consensus 236 PERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s--vfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~K 313 (361)
T KOG1006|consen 236 PERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS--VFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIK 313 (361)
T ss_pred hhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH--HHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhc
Confidence 999953 4588999999999999999999999977643 33444444445544332 23678899999999999
Q ss_pred CCCCCCChHHHhcCCCCCCCCcc
Q 042809 214 KPEKRWSAEELLNHTFISGNAKK 236 (241)
Q Consensus 214 ~p~~Rps~~~~l~~p~~~~~~~~ 236 (241)
+-..||+..+++.+||++..+..
T Consensus 314 d~~~Rpky~~Lk~~~fyr~y~~~ 336 (361)
T KOG1006|consen 314 DRSDRPKYDDLKKFPFYRMYAVE 336 (361)
T ss_pred ccccCcchhhhhcCchhhhhhhc
Confidence 99999999999999999877654
No 370
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-36 Score=236.33 Aligned_cols=214 Identities=30% Similarity=0.484 Sum_probs=182.1
Q ss_pred EEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHH
Q 042809 9 FVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYT 78 (241)
Q Consensus 9 vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 78 (241)
+|+|++++. ...+-+..|-.+|...+.|.||+ .+...+|++||-|-||.|.+.++.+ +.++...+++++
T Consensus 448 fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrdR-g~Fdd~tarF~~ 526 (732)
T KOG0614|consen 448 FALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGGELWTILRDR-GSFDDYTARFYV 526 (732)
T ss_pred HHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCchhhhhhhhc-CCcccchhhhhH
Confidence 566665533 33455788999999999999998 7888999999999999999999984 667776666665
Q ss_pred H------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCch
Q 042809 79 K------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFA 152 (241)
Q Consensus 79 ~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~ 152 (241)
. +|||++||++|||||+|++++.+|-+||.|||.++.+.. ....+.++|||.|.|||++.....+.+
T Consensus 527 acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~-------g~KTwTFcGTpEYVAPEIILnKGHD~a 599 (732)
T KOG0614|consen 527 ACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS-------GRKTWTFCGTPEYVAPEIILNKGHDRA 599 (732)
T ss_pred HHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhcc-------CCceeeecCCcccccchhhhccCcchh
Confidence 4 679999999999999999999999999999999998766 345678999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC-----ChHHHhcC
Q 042809 153 TDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW-----SAEELLNH 227 (241)
Q Consensus 153 ~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s~~~~l~~ 227 (241)
+|.||||+++||+++|.+||++.+ .+..............+|..+.....+||+++...+|.+|. .+.++-.|
T Consensus 600 vDyWaLGIli~ELL~G~pPFs~~d--pmktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH 677 (732)
T KOG0614|consen 600 VDYWALGILIYELLTGSPPFSGVD--PMKTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH 677 (732)
T ss_pred hHHHHHHHHHHHHHcCCCCCCCCc--hHHHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh
Confidence 999999999999999999998853 34444444444556678888999999999999999999998 49999999
Q ss_pred CCCCC
Q 042809 228 TFISG 232 (241)
Q Consensus 228 p~~~~ 232 (241)
.||.+
T Consensus 678 ~Wf~g 682 (732)
T KOG0614|consen 678 RWFEG 682 (732)
T ss_pred hhhhc
Confidence 99965
No 371
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=3.7e-34 Score=220.86 Aligned_cols=214 Identities=25% Similarity=0.386 Sum_probs=163.8
Q ss_pred CCcEEEEEeccc------------hHHHHHHHHHHHHHhh-cCCCcccc-----cCCceeeeeecccCCCCHHHHHHH--
Q 042809 5 TGALFVVKSAES------------EAGVQALRNEAEIRQS-LNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEK-- 64 (241)
Q Consensus 5 ~~~~vaiK~~~~------------~~~~~~~~~e~~~l~~-l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~-- 64 (241)
+++.+|+|.+.. ......+.+|+.++.+ ++||||++ ..++..++|+||+++++|.+++..
T Consensus 25 ~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~ 104 (269)
T cd08528 25 GQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLK 104 (269)
T ss_pred CCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHH
Confidence 678999997642 2234567788888865 78999988 567899999999999999998854
Q ss_pred -hCCCCCHHHHHHHHHHH------hhc-CCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcc
Q 042809 65 -FGGTLDAGVIRLYTKEI------LHG-NGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQ 136 (241)
Q Consensus 65 -~~~~~~~~~~~~~~~~~------Lh~-~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (241)
....++...++.++.|+ ||+ .+++|+||+|+||+++.++.++|+|||.+....... ......++.
T Consensus 105 ~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-------~~~~~~~~~ 177 (269)
T cd08528 105 EKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES-------KLTSVVGTI 177 (269)
T ss_pred hccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccceeeccccc-------ccccccCcc
Confidence 34567777666665544 785 789999999999999999999999999997543311 123345788
Q ss_pred cccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCC
Q 042809 137 LWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPE 216 (241)
Q Consensus 137 ~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 216 (241)
.|+|||.+.+..++.++|+||||+++|++++|..||............. .....+......+..+.+++.+||+.+|+
T Consensus 178 ~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~~p~ 255 (269)
T cd08528 178 LYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIV--EAVYEPLPEGMYSEDVTDVITSCLTPDAE 255 (269)
T ss_pred cCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHh--hccCCcCCcccCCHHHHHHHHHHCCCCCc
Confidence 8999999998889999999999999999999999997643322222211 11111212224678899999999999999
Q ss_pred CCCChHHHhcC
Q 042809 217 KRWSAEELLNH 227 (241)
Q Consensus 217 ~Rps~~~~l~~ 227 (241)
+|||+.++.++
T Consensus 256 ~Rp~~~e~~~~ 266 (269)
T cd08528 256 ARPDIIQVSAM 266 (269)
T ss_pred cCCCHHHHHHH
Confidence 99999998764
No 372
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-35 Score=239.66 Aligned_cols=219 Identities=24% Similarity=0.330 Sum_probs=178.5
Q ss_pred CcEEEEEeccchH---HHHHHHHHHHHHhhcCCCcccc----cCCceeeeeecccCCCCHHHHHHH-hCCCCCHHHHHHH
Q 042809 6 GALFVVKSAESEA---GVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEK-FGGTLDAGVIRLY 77 (241)
Q Consensus 6 ~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~h~~i~~----~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~ 77 (241)
-..||||+++... ....|.+|+.+|.+|+|+|+++ .-+....+|+|.+..|+|.+.|.. ....+-....-.|
T Consensus 138 ~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdy 217 (1039)
T KOG0199|consen 138 HVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDY 217 (1039)
T ss_pred EEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhhhcccchHHHHHhhccccceeHHHHHHH
Confidence 3578999988542 4577999999999999999999 344788999999999999999988 3455666666555
Q ss_pred HH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCc
Q 042809 78 TK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDF 151 (241)
Q Consensus 78 ~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ 151 (241)
+. +||.++++|||||-..|+++-....+||+|||+...++.....-. -.....-...|.|||.+...+++.
T Consensus 218 a~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yv---m~p~rkvPfAWCaPEsLrh~kFSh 294 (1039)
T KOG0199|consen 218 AMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYV---MAPQRKVPFAWCAPESLRHRKFSH 294 (1039)
T ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceE---ecCCCcCcccccCHhHhccccccc
Confidence 55 458999999999999999999999999999999987765322111 111122356799999999999999
Q ss_pred hhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 152 ATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 152 ~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
++|+|++|+++|||+| |+.||.+.. ...+++....+.....|+.++++++++++.||..+|.+|||+..+.+.-+.
T Consensus 295 aSDvWmyGVTiWEMFtyGEePW~G~~---g~qIL~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l 371 (1039)
T KOG0199|consen 295 ASDVWMYGVTIWEMFTYGEEPWVGCR---GIQILKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVL 371 (1039)
T ss_pred cchhhhhhhhHHhhhccCCCCCCCCC---HHHHHHhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHH
Confidence 9999999999999999 999998753 344455555777888889999999999999999999999999998765444
No 373
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=7.5e-34 Score=219.08 Aligned_cols=216 Identities=20% Similarity=0.269 Sum_probs=154.2
Q ss_pred CcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhC---CCCCHHHH
Q 042809 6 GALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG---GTLDAGVI 74 (241)
Q Consensus 6 ~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~ 74 (241)
...+++|.... ....+.+.+|+..+..++||||++ ......++||||+++|+|.+++.... ...+...+
T Consensus 22 ~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 101 (268)
T cd05086 22 VARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLL 101 (268)
T ss_pred cceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCcHHHHHHhhhcccccccHHHH
Confidence 44567776553 234567999999999999999998 55678899999999999999998642 22344333
Q ss_pred HHHH------HHHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccc--
Q 042809 75 RLYT------KEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN-- 146 (241)
Q Consensus 75 ~~~~------~~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-- 146 (241)
..++ .++||+.+++|+||+|+||+++.++.++|+|||++...... ..........++..|+|||.+..
T Consensus 102 ~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~----~~~~~~~~~~~~~~y~aPE~~~~~~ 177 (268)
T cd05086 102 QRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKE----DYIETEDDKCVPLRWLAPELVGEFH 177 (268)
T ss_pred HHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcc----hhhhcccCCcCcccccCchhccccc
Confidence 3333 35589999999999999999999999999999987532110 00011123446788999998743
Q ss_pred -----cCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHH--hcCCCCCCChhhHHHHHHHHHHhhccCCCCC
Q 042809 147 -----EGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIA--CSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218 (241)
Q Consensus 147 -----~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 218 (241)
..++.++|+||||+++|++++ |..||............... .....+..+...++.+.+++..|| .+|.+|
T Consensus 178 ~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~R 256 (268)
T cd05086 178 GGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKR 256 (268)
T ss_pred CccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccC
Confidence 235678999999999999997 67788654332222211111 111223344556788999999999 679999
Q ss_pred CChHHHhc
Q 042809 219 WSAEELLN 226 (241)
Q Consensus 219 ps~~~~l~ 226 (241)
||++++++
T Consensus 257 p~~~~i~~ 264 (268)
T cd05086 257 ATAEEVHR 264 (268)
T ss_pred CCHHHHHH
Confidence 99999975
No 374
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=2.9e-35 Score=231.31 Aligned_cols=222 Identities=25% Similarity=0.410 Sum_probs=172.5
Q ss_pred CCCCCcEEEEEeccchHH-HHHHHHHHHHHhhcC------CCcccc-----cCCceeeeeecccCCCCHHHHHHHhCC--
Q 042809 2 NKGTGALFVVKSAESEAG-VQALRNEAEIRQSLN------SPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGG-- 67 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~~-~~~~~~e~~~l~~l~------h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~-- 67 (241)
|..-|.-||||+++++.. .+.=.+|+++|++|. .-|.++ ...+++|+|+|-+. -+|.+.++..+.
T Consensus 453 D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~Ls-lNLRevLKKyG~nv 531 (752)
T KOG0670|consen 453 DQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPLS-LNLREVLKKYGRNV 531 (752)
T ss_pred ccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhhh-chHHHHHHHhCccc
Confidence 566778999999997654 355689999999995 234444 78899999999994 699999998754
Q ss_pred CCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecC-CCeeecCCCcchhhcccccCCccccccccccCcccccC
Q 042809 68 TLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSH-GDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMA 140 (241)
Q Consensus 68 ~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 140 (241)
.+....++.|++|+ |...|++|.||||+|||++.. ..+||||||.|....+... ....-+..|.|
T Consensus 532 GL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~enei--------tPYLVSRFYRa 603 (752)
T KOG0670|consen 532 GLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEI--------TPYLVSRFYRA 603 (752)
T ss_pred ceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCccccccccccc--------cHHHHHHhccC
Confidence 46666666666665 678999999999999999875 5689999999976655211 11224678999
Q ss_pred cccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCC---------------------------
Q 042809 141 PEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP--------------------------- 193 (241)
Q Consensus 141 PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------- 193 (241)
||++.|.+|+...|+||+||+|||++||+..|.+.+...+..+........+.
T Consensus 604 PEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~v 683 (752)
T KOG0670|consen 604 PEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKV 683 (752)
T ss_pred cceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEecccc
Confidence 99999999999999999999999999999999988777665544322111000
Q ss_pred --------------------------CCC---hhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCC
Q 042809 194 --------------------------HFP---TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISG 232 (241)
Q Consensus 194 --------------------------~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~ 232 (241)
.++ +.....+.+|+.+||.+||.+|.|+.++|.||||.+
T Consensus 684 T~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 684 TEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred ccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence 011 112246899999999999999999999999999975
No 375
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.4e-33 Score=218.00 Aligned_cols=218 Identities=18% Similarity=0.306 Sum_probs=162.5
Q ss_pred CCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcCCCccccc-----C---C---ceeeeeecccCCCCHHHHHHHhC-
Q 042809 3 KGTGALFVVKSAES----EAGVQALRNEAEIRQSLNSPNIGRN-----G---E---KTVNIFMEYMAGGSLLDVAEKFG- 66 (241)
Q Consensus 3 ~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~-----~---~---~~~~lv~e~~~~~~L~~~l~~~~- 66 (241)
..++..||+|.+.. ....+.+.+|+.++++++||||++. . . ...+++++|+.+|+|..++....
T Consensus 24 ~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 103 (273)
T cd05074 24 DGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRI 103 (273)
T ss_pred CCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcc
Confidence 45788999998763 3446678899999999999999881 1 1 13478899999999998875421
Q ss_pred ----CCCCHHHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcc
Q 042809 67 ----GTLDAGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQ 136 (241)
Q Consensus 67 ----~~~~~~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (241)
..++...+..++.| +||+.|++|+||+|+||+++.++.++|+|||.+........ ........++.
T Consensus 104 ~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~~~ 179 (273)
T cd05074 104 GEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDY----YRQGCASKLPV 179 (273)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccccccccCCcc----eecCCCccCch
Confidence 13566655555554 47999999999999999999999999999999875432110 01111223456
Q ss_pred cccCcccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCC
Q 042809 137 LWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKP 215 (241)
Q Consensus 137 ~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 215 (241)
.|++||.+.+..++.++|+||||+++|++++ |..||........ ............+...+..+.+++.+||+.+|
T Consensus 180 ~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p 256 (273)
T cd05074 180 KWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEI---YNYLIKGNRLKQPPDCLEDVYELMCQCWSPEP 256 (273)
T ss_pred hhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHH---HHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCh
Confidence 7999999988888999999999999999999 8899876433222 22222233333445567899999999999999
Q ss_pred CCCCChHHHhcC
Q 042809 216 EKRWSAEELLNH 227 (241)
Q Consensus 216 ~~Rps~~~~l~~ 227 (241)
.+|||+.+++..
T Consensus 257 ~~Rps~~~~~~~ 268 (273)
T cd05074 257 KCRPSFQHLRDQ 268 (273)
T ss_pred hhCcCHHHHHHH
Confidence 999999999763
No 376
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=4.9e-34 Score=243.86 Aligned_cols=112 Identities=30% Similarity=0.529 Sum_probs=94.6
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCH
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA 71 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~ 71 (241)
+..+++.||||++... .....+.+|+.++..++||||++ .....+|+||||+.|++|.+++... ..+.+
T Consensus 25 ~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~-~~l~~ 103 (669)
T cd05610 25 KKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIY-GYFDE 103 (669)
T ss_pred ECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhc-CCCCH
Confidence 4567899999998743 23467889999999999999988 5667899999999999999999863 45667
Q ss_pred HHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcch
Q 042809 72 GVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCAR 114 (241)
Q Consensus 72 ~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~ 114 (241)
..++.++.| +||++|++||||||+||+++.++.++|+|||++.
T Consensus 104 ~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 104 EMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 666666554 4799999999999999999999999999999875
No 377
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-35 Score=218.28 Aligned_cols=219 Identities=26% Similarity=0.322 Sum_probs=165.0
Q ss_pred CCCCCcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-----------cCCceeeeeecccCCCCHHHHHHHhC
Q 042809 2 NKGTGALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-----------NGEKTVNIFMEYMAGGSLLDVAEKFG 66 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-----------~~~~~~~lv~e~~~~~~L~~~l~~~~ 66 (241)
|.-++++||+|....+ ...++..+|...+..+.|+||++ ..-...|+|||+|. .+|...+.-
T Consensus 37 D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~-~nl~~vi~~-- 113 (369)
T KOG0665|consen 37 DQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMD-ANLCQVILM-- 113 (369)
T ss_pred hhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhh-hHHHHHHHH--
Confidence 4567889999986643 34567889999999999999988 34457899999996 699998884
Q ss_pred CCCCHHHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccC
Q 042809 67 GTLDAGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMA 140 (241)
Q Consensus 67 ~~~~~~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 140 (241)
.++-..+..+..| .||+.|++||||||+||++..++.+||.|||++...... -.......++.|.|
T Consensus 114 -elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~-------~~mtpyVvtRyyra 185 (369)
T KOG0665|consen 114 -ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD-------FMMTPYVVTRYYRA 185 (369)
T ss_pred -hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcc-------cccCchhheeeccC
Confidence 3556666666554 479999999999999999999999999999999754331 12233456888999
Q ss_pred cccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcC------------------------------
Q 042809 141 PEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSN------------------------------ 190 (241)
Q Consensus 141 PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~------------------------------ 190 (241)
||++.+..+...+||||+||++.||++|..-|.+.+.-+--.........
T Consensus 186 pevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~ 265 (369)
T KOG0665|consen 186 PEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSE 265 (369)
T ss_pred chheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhh
Confidence 99999988999999999999999999999888653211110000000000
Q ss_pred CCC--------CCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCC
Q 042809 191 EKP--------HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFIS 231 (241)
Q Consensus 191 ~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~ 231 (241)
..+ ..++.-...+++++.+||..+|++|.|+.++|+|||++
T Consensus 266 ~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 266 LFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred hCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 000 00111234689999999999999999999999999996
No 378
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-35 Score=236.12 Aligned_cols=168 Identities=33% Similarity=0.460 Sum_probs=140.8
Q ss_pred CCCCCCcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc-------cC----CceeeeeecccCCCCHHHHHHHh-
Q 042809 1 MNKGTGALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR-------NG----EKTVNIFMEYMAGGSLLDVAEKF- 65 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~-------~~----~~~~~lv~e~~~~~~L~~~l~~~- 65 (241)
+++.||..||||.++. ....+.-.+|+++|++++|+|||+ .. .....+|||||.||+|...+.+.
T Consensus 33 rnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PE 112 (732)
T KOG4250|consen 33 RNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPE 112 (732)
T ss_pred cccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCcc
Confidence 4789999999999885 455677889999999999999998 12 44578999999999999999864
Q ss_pred -CCCCCHHHHHHHHH------HHhhcCCccccCCCCCcEEeec--CCC--eeecCCCcchhhcccccCCccccccccccC
Q 042809 66 -GGTLDAGVIRLYTK------EILHGNGILHCDLKCNNVLLGS--HGD--VKLPDLGCARRVNDLKNNGNLKQSWQSIGG 134 (241)
Q Consensus 66 -~~~~~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~--~~~--~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ 134 (241)
...+++.....++. .+||++||+||||||.||++-. +|+ .||+|||.|+...+ ...+.+..|
T Consensus 113 N~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d-------~s~~~S~vG 185 (732)
T KOG4250|consen 113 NAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDD-------NSLFTSLVG 185 (732)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCC-------CCeeeeecC
Confidence 34577777766655 4589999999999999999833 344 79999999987766 235667889
Q ss_pred cccccCccccc-ccCCCchhhHHHHHHHHHHHHhCCCCCccc
Q 042809 135 TQLWMAPEVLR-NEGLDFATDIWSLGCMVIEMATGRPPWGDK 175 (241)
Q Consensus 135 ~~~~~aPE~~~-~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 175 (241)
|+.|++||.+. ...|+..+|.|||||++|+++||..||-..
T Consensus 186 T~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 186 TEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF 227 (732)
T ss_pred chhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence 99999999998 488899999999999999999999999543
No 379
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-34 Score=235.98 Aligned_cols=224 Identities=34% Similarity=0.565 Sum_probs=177.4
Q ss_pred CCCCCcEEEEEeccc-hHHHHHHHHHHHHHhhcC-CCcccc----------cCCceeeeeecccCCCCHHHHHHHh-CCC
Q 042809 2 NKGTGALFVVKSAES-EAGVQALRNEAEIRQSLN-SPNIGR----------NGEKTVNIFMEYMAGGSLLDVAEKF-GGT 68 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~-~~~~~~~~~e~~~l~~l~-h~~i~~----------~~~~~~~lv~e~~~~~~L~~~l~~~-~~~ 68 (241)
++++|+.+|+|+..- ...-+++..|..+++.+. |||++. -.++.+|||||||.|||.-++.+.. +.+
T Consensus 40 ~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~r 119 (953)
T KOG0587|consen 40 HVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNR 119 (953)
T ss_pred eeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccc
Confidence 567888888888663 344567888899999886 999976 6788999999999999999998865 567
Q ss_pred CCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcc
Q 042809 69 LDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPE 142 (241)
Q Consensus 69 ~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE 142 (241)
+.+..+..++..+ ||...++|||||..||+++.+|.|||.|||.+..... ........+||+.|+|||
T Consensus 120 l~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQlds------T~grRnT~iGtP~WMAPE 193 (953)
T KOG0587|consen 120 LKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDS------TVGRRNTFIGTPYWMAPE 193 (953)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeeec------ccccccCcCCCcccccce
Confidence 8888877776644 7999999999999999999999999999999865433 122334677999999999
Q ss_pred cccc-----cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHh-cCCCCCCChhhHHHHHHHHHHhhccCCC
Q 042809 143 VLRN-----EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIAC-SNEKPHFPTQFFKKVLDFLAKCLERKPE 216 (241)
Q Consensus 143 ~~~~-----~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 216 (241)
++.. ..|+.++|+||||++..||..|.+|+.+. .....+....- .......|...+..+.++|..||.++..
T Consensus 194 Viac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~Dm--HPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e 271 (953)
T KOG0587|consen 194 VIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDM--HPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYE 271 (953)
T ss_pred eeecccCCCCCcccccchhhccceeehhcCCCCCccCc--chhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccc
Confidence 9964 44678999999999999999999999763 33333322111 1111123566778999999999999999
Q ss_pred CCCChHHHhcCCCCCCC
Q 042809 217 KRWSAEELLNHTFISGN 233 (241)
Q Consensus 217 ~Rps~~~~l~~p~~~~~ 233 (241)
+||++.+++.|||++..
T Consensus 272 ~RP~~~~ll~hpFi~e~ 288 (953)
T KOG0587|consen 272 QRPSTEELLKHPFITEQ 288 (953)
T ss_pred cCcchhhhccCCccccc
Confidence 99999999999999843
No 380
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-35 Score=240.79 Aligned_cols=220 Identities=29% Similarity=0.406 Sum_probs=162.1
Q ss_pred CcEEEEEeccchHHHHHHHHHHHHHhhcC-CCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCC------CC-HH
Q 042809 6 GALFVVKSAESEAGVQALRNEAEIRQSLN-SPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGT------LD-AG 72 (241)
Q Consensus 6 ~~~vaiK~~~~~~~~~~~~~e~~~l~~l~-h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~------~~-~~ 72 (241)
|+.||||.+-.+- ...+.+|+..+..-+ |||||+ .+....|+..|.|. .+|.+++...+.. .. ..
T Consensus 533 ~R~VAVKrll~e~-~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~-~sL~dlie~~~~d~~~~~~i~~~~ 610 (903)
T KOG1027|consen 533 GREVAVKRLLEEF-FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA-CSLQDLIESSGLDVEMQSDIDPIS 610 (903)
T ss_pred CceehHHHHhhHh-HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh-hhHHHHHhccccchhhcccccHHH
Confidence 5677888766443 566789999998876 999999 78889999999996 7999999873110 11 11
Q ss_pred HHH--HHHHHHhhcCCccccCCCCCcEEeec---CC--CeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 73 VIR--LYTKEILHGNGILHCDLKCNNVLLGS---HG--DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 73 ~~~--~~~~~~Lh~~~~vH~dl~p~Nil~~~---~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
... ....+.||+.+||||||||.||+++. ++ +++|+|||+++........- .......||.+|.|||.+.
T Consensus 611 ~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~---~r~s~~sGt~GW~APE~L~ 687 (903)
T KOG1027|consen 611 VLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSF---SRLSGGSGTSGWQAPEQLR 687 (903)
T ss_pred HHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchh---hcccCCCCcccccCHHHHh
Confidence 111 22335599999999999999999977 34 58999999999765432222 2245567999999999999
Q ss_pred ccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHH
Q 042809 146 NEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224 (241)
Q Consensus 146 ~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 224 (241)
....+.++||||+||++|+.++ |..||.+.-... .+++..........-.... ++.+||.+|++.+|..|||+.++
T Consensus 688 ~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~-~NIl~~~~~L~~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~V 764 (903)
T KOG1027|consen 688 EDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ-ANILTGNYTLVHLEPLPDC--EAKDLISRMLNPDPQLRPSATDV 764 (903)
T ss_pred ccccCcccchhhcCceEEEEecCCccCCCchHHhh-hhhhcCccceeeeccCchH--HHHHHHHHhcCCCcccCCCHHHH
Confidence 8888889999999999999999 599998754332 2222211111111111111 78999999999999999999999
Q ss_pred hcCCCCCCC
Q 042809 225 LNHTFISGN 233 (241)
Q Consensus 225 l~~p~~~~~ 233 (241)
|.||||=..
T Consensus 765 L~HPlFW~~ 773 (903)
T KOG1027|consen 765 LNHPLFWDS 773 (903)
T ss_pred hCCCccCCh
Confidence 999998443
No 381
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=3.8e-34 Score=212.34 Aligned_cols=224 Identities=27% Similarity=0.386 Sum_probs=166.0
Q ss_pred cEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc------cCCceeeeeecccCCCCHHHHHHHhC----CCCCHH
Q 042809 7 ALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR------NGEKTVNIFMEYMAGGSLLDVAEKFG----GTLDAG 72 (241)
Q Consensus 7 ~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~------~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~ 72 (241)
+.+|||.++.+ -......+|+.+++.++|||++. ..+..+++++||.++ +|...|+-++ ..++..
T Consensus 54 k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~ 132 (438)
T KOG0666|consen 54 KEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRS 132 (438)
T ss_pred hhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEehhhhh-hHHHHHHHhccchhccCCHH
Confidence 47888988755 23356889999999999999987 458999999999987 9999887542 346777
Q ss_pred HHHHHHHHH------hhcCCccccCCCCCcEEeecC----CCeeecCCCcchhhcccccCCccccccccccCcccccCcc
Q 042809 73 VIRLYTKEI------LHGNGILHCDLKCNNVLLGSH----GDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPE 142 (241)
Q Consensus 73 ~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~----~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE 142 (241)
.++.++-|+ ||++=+.||||||.||++..+ |.+||+|+|++..+.+.-.. ......+.-|..|+|||
T Consensus 133 mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkp---l~s~d~VVVTiWYRAPE 209 (438)
T KOG0666|consen 133 MVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKP---LASLDPVVVTIWYRAPE 209 (438)
T ss_pred HHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccc---cccCCceEEEEEecChH
Confidence 777776666 699999999999999999888 89999999999876552111 11223345688899999
Q ss_pred cccccC-CCchhhHHHHHHHHHHHHhCCCCCccchhchH-------HHHHHHHhcCCCC------------CC-------
Q 042809 143 VLRNEG-LDFATDIWSLGCMVIEMATGRPPWGDKISNAA-------ATLLKIACSNEKP------------HF------- 195 (241)
Q Consensus 143 ~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-------~~~~~~~~~~~~~------------~~------- 195 (241)
.+.|.. |+++.|+|+.||++.|++|-.+.|.+...... ..+.+.......| +.
T Consensus 210 LLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f 289 (438)
T KOG0666|consen 210 LLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDF 289 (438)
T ss_pred HhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHh
Confidence 999855 79999999999999999998887765322111 0111111000000 00
Q ss_pred ------C----------hhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCC
Q 042809 196 ------P----------TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNA 234 (241)
Q Consensus 196 ------~----------~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~ 234 (241)
+ ..-++...+|+.++|..||.+|+|++++++|+||+...
T Consensus 290 ~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~ 344 (438)
T KOG0666|consen 290 RRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDP 344 (438)
T ss_pred HHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCC
Confidence 0 00113478999999999999999999999999998763
No 382
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-33 Score=212.49 Aligned_cols=224 Identities=26% Similarity=0.468 Sum_probs=180.8
Q ss_pred CCCCCcEEEEEeccch-----HHHHHHHHHHHHHhhcC-CCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCC
Q 042809 2 NKGTGALFVVKSAESE-----AGVQALRNEAEIRQSLN-SPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD 70 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~-h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~ 70 (241)
.++|.++||+|+++++ ...+-...|-....+.. ||.+|. +.+..+++|.||++||+|--.++. ...++
T Consensus 271 ~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~ggdlmfhmqr-qrklp 349 (593)
T KOG0695|consen 271 LKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR-QRKLP 349 (593)
T ss_pred hcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEecCcceeeehhh-hhcCc
Confidence 5789999999998754 23444566666666664 888876 788999999999999999888887 46688
Q ss_pred HHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc
Q 042809 71 AGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 71 ~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 144 (241)
++.++.+.. .+||++||+.||||.+|++++..|.+||+|+|+++.--. .......++|||.|.|||++
T Consensus 350 eeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~------~gd~tstfcgtpnyiapeil 423 (593)
T KOG0695|consen 350 EEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG------PGDTTSTFCGTPNYIAPEIL 423 (593)
T ss_pred HHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCC------CCcccccccCCCcccchhhh
Confidence 888877654 458999999999999999999999999999999973211 12334578899999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCc----cchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC-
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWG----DKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW- 219 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp- 219 (241)
.|..|....|.|+||++++||+.|+.||. ++.+.+....+.+......-.+|..++-....+++..|++||++|.
T Consensus 424 rgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprslsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 424 RGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSLSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred cccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccceeehhhHHHHHHhhcCCcHHhcC
Confidence 99999999999999999999999999994 2333333444444444455567788888889999999999999996
Q ss_pred -----ChHHHhcCCCCCC
Q 042809 220 -----SAEELLNHTFISG 232 (241)
Q Consensus 220 -----s~~~~l~~p~~~~ 232 (241)
.+.++-.|+||+.
T Consensus 504 c~~~~g~~dik~h~ffr~ 521 (593)
T KOG0695|consen 504 CRPQTGFSDIKSHAFFRS 521 (593)
T ss_pred CCcccchhhhhcchhhhh
Confidence 5789999999974
No 383
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.6e-33 Score=237.58 Aligned_cols=184 Identities=29% Similarity=0.428 Sum_probs=134.3
Q ss_pred ceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhc
Q 042809 44 KTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN 117 (241)
Q Consensus 44 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 117 (241)
..+||=||||+..+|.+++......-.....+.++++| +|++|++||||||.|||+++++.+||+|||+++...
T Consensus 669 ~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~ 748 (1351)
T KOG1035|consen 669 LILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLK 748 (1351)
T ss_pred eEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhh
Confidence 35788899999877777777633222567777777766 699999999999999999999999999999998732
Q ss_pred c-----------ccc-CCccccccccccCcccccCcccccccC---CCchhhHHHHHHHHHHHHhCCCCCccchhchHHH
Q 042809 118 D-----------LKN-NGNLKQSWQSIGGTQLWMAPEVLRNEG---LDFATDIWSLGCMVIEMATGRPPWGDKISNAAAT 182 (241)
Q Consensus 118 ~-----------~~~-~~~~~~~~~~~~~~~~~~aPE~~~~~~---~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~ 182 (241)
. +.. ............||..|+|||.+.+.. |+.++|+||||++++||+. ||....+.. ..
T Consensus 749 ~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa-~i 824 (1351)
T KOG1035|consen 749 ENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERA-SI 824 (1351)
T ss_pred hhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHH-HH
Confidence 1 000 111111334567999999999997644 8999999999999999987 576543322 22
Q ss_pred HHHHHhcCCCCC---CChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCC
Q 042809 183 LLKIACSNEKPH---FPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISG 232 (241)
Q Consensus 183 ~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~ 232 (241)
+.... .+..|. +....-+.-..+|++|++.||.+|||+.++|.+.||-.
T Consensus 825 L~~LR-~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llpp 876 (1351)
T KOG1035|consen 825 LTNLR-KGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLPP 876 (1351)
T ss_pred HHhcc-cCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence 22222 222221 22333356678999999999999999999999999975
No 384
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=2.3e-32 Score=228.65 Aligned_cols=189 Identities=21% Similarity=0.208 Sum_probs=125.8
Q ss_pred cCCceeeeeecccCCCCHHHHHHHhCCCCC-------------------HHHHHHHH------HHHhhcCCccccCCCCC
Q 042809 41 NGEKTVNIFMEYMAGGSLLDVAEKFGGTLD-------------------AGVIRLYT------KEILHGNGILHCDLKCN 95 (241)
Q Consensus 41 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~-------------------~~~~~~~~------~~~Lh~~~~vH~dl~p~ 95 (241)
..+...++|+||+.+++|.+++........ ...+..++ +++||+++++||||||+
T Consensus 205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~ 284 (566)
T PLN03225 205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQ 284 (566)
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHH
Confidence 456789999999999999999876432111 11122232 35589999999999999
Q ss_pred cEEeec-CCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccC----------------------CCch
Q 042809 96 NVLLGS-HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEG----------------------LDFA 152 (241)
Q Consensus 96 Nil~~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~----------------------~~~~ 152 (241)
||+++. ++.+||+|||++........ .......+++.|+|||.+.... +..+
T Consensus 285 NILl~~~~~~~KL~DFGlA~~l~~~~~-----~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k 359 (566)
T PLN03225 285 NIIFSEGSGSFKIIDLGAAADLRVGIN-----YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDR 359 (566)
T ss_pred HEEEeCCCCcEEEEeCCCccccccccc-----cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCC
Confidence 999986 57899999999975432111 1112356789999999764221 2345
Q ss_pred hhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHh-------cCCCCCCChh----------hHHHHHHHHHHhhccCC
Q 042809 153 TDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIAC-------SNEKPHFPTQ----------FFKKVLDFLAKCLERKP 215 (241)
Q Consensus 153 ~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~----------~~~~~~~li~~~l~~~p 215 (241)
+||||+||++|+|+++..++......- ........ .......... .....++|+.+||+.||
T Consensus 360 ~DVwSlGviL~el~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP 438 (566)
T PLN03225 360 FDIYSAGLIFLQMAFPNLRSDSNLIQF-NRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKG 438 (566)
T ss_pred cccHHHHHHHHHHHhCcCCCchHHHHH-HHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCc
Confidence 699999999999999877754321110 00000000 0000001111 12245689999999999
Q ss_pred CCCCChHHHhcCCCCCCCCc
Q 042809 216 EKRWSAEELLNHTFISGNAK 235 (241)
Q Consensus 216 ~~Rps~~~~l~~p~~~~~~~ 235 (241)
.+|||++++++||||++...
T Consensus 439 ~kR~ta~e~L~Hpff~~~~~ 458 (566)
T PLN03225 439 RQRISAKAALAHPYFDREGL 458 (566)
T ss_pred ccCCCHHHHhCCcCcCCCCc
Confidence 99999999999999987654
No 385
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-31 Score=225.77 Aligned_cols=216 Identities=24% Similarity=0.363 Sum_probs=171.6
Q ss_pred CcEEEEEeccc---hHHHHHHHHHHHHHhhcC-CCcccc-----cCCceeeeeecccCCCCHHHHHHHhC----------
Q 042809 6 GALFVVKSAES---EAGVQALRNEAEIRQSLN-SPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG---------- 66 (241)
Q Consensus 6 ~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~-h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~---------- 66 (241)
...||||.... ....+.+..|+++|+.+. |+||+. ...+.+++|+||+.+|+|.++++..+
T Consensus 328 ~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~ 407 (609)
T KOG0200|consen 328 YVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGV 407 (609)
T ss_pred eEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCC
Confidence 56899999773 345688999999999997 999988 45788999999999999999999865
Q ss_pred -----CCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCc
Q 042809 67 -----GTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGT 135 (241)
Q Consensus 67 -----~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~ 135 (241)
..+.......++.|+ |++.+++||||-.+||+++.+..+||+|||+++.......... ......-.
T Consensus 408 ~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~---~~~~~~LP 484 (609)
T KOG0200|consen 408 FPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRT---KSSAGTLP 484 (609)
T ss_pred CccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEe---cCCCCccc
Confidence 236667777777765 7999999999999999999999999999999974333111110 00000023
Q ss_pred ccccCcccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccC
Q 042809 136 QLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERK 214 (241)
Q Consensus 136 ~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 214 (241)
..|+|||.+....|+.++||||+|+++||++| |..||.+-.. ...+.+....+.+...|...+.+++++++.||+.+
T Consensus 485 ~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~--~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~ 562 (609)
T KOG0200|consen 485 VKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP--TEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNAD 562 (609)
T ss_pred eeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc--HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCC
Confidence 45999999999999999999999999999999 9999976321 12223344556666778888899999999999999
Q ss_pred CCCCCChHHHhc
Q 042809 215 PEKRWSAEELLN 226 (241)
Q Consensus 215 p~~Rps~~~~l~ 226 (241)
|.+||++.++.+
T Consensus 563 p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 563 PEDRPTFSECVE 574 (609)
T ss_pred cccCCCHHHHHH
Confidence 999999999864
No 386
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.97 E-value=1.1e-30 Score=204.00 Aligned_cols=197 Identities=16% Similarity=0.150 Sum_probs=137.4
Q ss_pred HHHHhhcCCCcccccC---------CceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHHHH------HhhcCCccccC
Q 042809 27 AEIRQSLNSPNIGRNG---------EKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKE------ILHGNGILHCD 91 (241)
Q Consensus 27 ~~~l~~l~h~~i~~~~---------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~------~Lh~~~~vH~d 91 (241)
...+..+.|+|++... ....+++++++. .++.+.+... ...++..+..++.| +||+++++|||
T Consensus 74 ~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrD 151 (294)
T PHA02882 74 WKNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLV-ENTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEHGISHGD 151 (294)
T ss_pred HHHhccCCCCCCCcEEEeeeEecCCceEEEEEEehhc-cCHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 3445567899987711 124467888874 5777776652 33455555555544 48999999999
Q ss_pred CCCCcEEeecCCCeeecCCCcchhhcccccCCc-cccccccccCcccccCcccccccCCCchhhHHHHHHHHHHHHhCCC
Q 042809 92 LKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGN-LKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRP 170 (241)
Q Consensus 92 l~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~ 170 (241)
|||+||+++.++.++|+|||++........... .........||+.|+|||.+.+..++.++||||||+++|++++|+.
T Consensus 152 iKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~ 231 (294)
T PHA02882 152 IKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKL 231 (294)
T ss_pred CCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999976532111111 0111123458999999999999999999999999999999999999
Q ss_pred CCccchhch-HHHHHHH----HhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 171 PWGDKISNA-AATLLKI----ACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 171 p~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
||....... ....... ..... .......+..+.++++.|+..+|.+||+++++++
T Consensus 232 P~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 232 PWKGFGHNGNLIHAAKCDFIKRLHEG-KIKIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred CCCccccchHHHHHhHHHHHHHhhhh-hhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 997653221 1111110 00111 1112344678999999999999999999999875
No 387
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=3.6e-31 Score=188.92 Aligned_cols=224 Identities=25% Similarity=0.402 Sum_probs=162.6
Q ss_pred CCCCCcEEEEEeccchHHHHHHHHHHHHHhhcC-CCcccc-------cCCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 2 NKGTGALFVVKSAESEAGVQALRNEAEIRQSLN-SPNIGR-------NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~-h~~i~~-------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
+..++..++||+++ +...+.+.+|+++|..|. ||||++ .......+|+||+++.+...+... ++.-.
T Consensus 59 ~~~~~eK~ViKiLK-PVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~t----l~d~d 133 (338)
T KOG0668|consen 59 NITNNEKCVIKILK-PVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYPT----LTDYD 133 (338)
T ss_pred ccCCCceEEEeeec-hHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccHHHHhhh----hchhh
Confidence 44678889999987 333577999999999998 999987 456678899999998887766654 33334
Q ss_pred HHHHH------HHHhhcCCccccCCCCCcEEeecCC-CeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 74 IRLYT------KEILHGNGILHCDLKCNNVLLGSHG-DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 74 ~~~~~------~~~Lh~~~~vH~dl~p~Nil~~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
++.+. +.++|+.||.|||+||.|++++... .++|+|+|++.-..+.. .......++.|.-||.+..
T Consensus 134 IryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~-------eYnVRVASRyfKGPELLVd 206 (338)
T KOG0668|consen 134 IRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-------EYNVRVASRYFKGPELLVD 206 (338)
T ss_pred HHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCc-------eeeeeeehhhcCCchheee
Confidence 44443 4557999999999999999998864 59999999997654422 2223345677889999865
Q ss_pred -cCCCchhhHHHHHHHHHHHHhCCCCCccchhc--hHHHHHHHH------------hcCCCCCC----------------
Q 042809 147 -EGLDFATDIWSLGCMVIEMATGRPPWGDKISN--AAATLLKIA------------CSNEKPHF---------------- 195 (241)
Q Consensus 147 -~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~------------~~~~~~~~---------------- 195 (241)
..|+.+-|+|||||++..|+..+.||....+. ....+.+.. .....+.+
T Consensus 207 y~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi 286 (338)
T KOG0668|consen 207 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFI 286 (338)
T ss_pred chhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhC
Confidence 44788899999999999999988887432111 111111100 00011100
Q ss_pred ----ChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCccC
Q 042809 196 ----PTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKKN 237 (241)
Q Consensus 196 ----~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~~~ 237 (241)
..-.++++.+|+.++|..|..+|+|+.|++.||||....+..
T Consensus 287 ~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~~~~ 332 (338)
T KOG0668|consen 287 NSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVREAE 332 (338)
T ss_pred CccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHHHHh
Confidence 011347899999999999999999999999999997765543
No 388
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=3.6e-30 Score=210.93 Aligned_cols=223 Identities=20% Similarity=0.172 Sum_probs=148.0
Q ss_pred CCCcEEEEEeccchH--HHHH--------------HHHHHHHHhhcCCCcccc------------------cCCceeeee
Q 042809 4 GTGALFVVKSAESEA--GVQA--------------LRNEAEIRQSLNSPNIGR------------------NGEKTVNIF 49 (241)
Q Consensus 4 ~~~~~vaiK~~~~~~--~~~~--------------~~~e~~~l~~l~h~~i~~------------------~~~~~~~lv 49 (241)
..++.||||.+.... ..+. ...|+.++.+++|.+++. ...+..++|
T Consensus 184 ~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV 263 (507)
T PLN03224 184 QKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLV 263 (507)
T ss_pred ccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEE
Confidence 456789999976321 1222 334667777777766522 124578999
Q ss_pred ecccCCCCHHHHHHHhCCC-----------------------CCHHHHHHHHH------HHhhcCCccccCCCCCcEEee
Q 042809 50 MEYMAGGSLLDVAEKFGGT-----------------------LDAGVIRLYTK------EILHGNGILHCDLKCNNVLLG 100 (241)
Q Consensus 50 ~e~~~~~~L~~~l~~~~~~-----------------------~~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~ 100 (241)
+||+.+++|.+++...... ++...+..++. .+||+.+++||||||+||+++
T Consensus 264 ~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~ 343 (507)
T PLN03224 264 WKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVT 343 (507)
T ss_pred EEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEEC
Confidence 9999999999998753211 22334444444 447999999999999999999
Q ss_pred cCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCC----------------------CchhhHHHH
Q 042809 101 SHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGL----------------------DFATDIWSL 158 (241)
Q Consensus 101 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~----------------------~~~~Di~sl 158 (241)
.++.++|+|||++........ .......+++.|+|||.+..... ....|+||+
T Consensus 344 ~~~~~kL~DFGla~~~~~~~~-----~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSl 418 (507)
T PLN03224 344 VDGQVKIIDFGAAVDMCTGIN-----FNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTA 418 (507)
T ss_pred CCCcEEEEeCcCccccccCCc-----cCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhH
Confidence 999999999999864322110 11112234789999998753221 124699999
Q ss_pred HHHHHHHHhCCC-CCccchhc--------hHHHHHHHHhcCCCCCC--ChhhHHHHHHHHHHhhccCC---CCCCChHHH
Q 042809 159 GCMVIEMATGRP-PWGDKISN--------AAATLLKIACSNEKPHF--PTQFFKKVLDFLAKCLERKP---EKRWSAEEL 224 (241)
Q Consensus 159 G~~l~~l~~g~~-p~~~~~~~--------~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p---~~Rps~~~~ 224 (241)
||++++|++|.. ||.+...- ......+. .......+ ....++..++|+.+||..+| .+|+|++++
T Consensus 419 Gvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~-~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~ea 497 (507)
T PLN03224 419 GVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRM-YKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQA 497 (507)
T ss_pred HHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHh-hcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHH
Confidence 999999999875 66431100 00011111 11112222 23466889999999999866 689999999
Q ss_pred hcCCCCCC
Q 042809 225 LNHTFISG 232 (241)
Q Consensus 225 l~~p~~~~ 232 (241)
|+||||..
T Consensus 498 L~Hp~f~~ 505 (507)
T PLN03224 498 LSHRFFLP 505 (507)
T ss_pred hCCCCcCC
Confidence 99999975
No 389
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.1e-31 Score=218.35 Aligned_cols=213 Identities=25% Similarity=0.324 Sum_probs=175.8
Q ss_pred CcEEEEEeccc---hHHHHHHHHHHHHHhhcCCCcccc----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHH
Q 042809 6 GALFVVKSAES---EAGVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYT 78 (241)
Q Consensus 6 ~~~vaiK~~~~---~~~~~~~~~e~~~l~~l~h~~i~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 78 (241)
+.+||||++.+ .....++..|+-.|.+|+|||+++ --...+.||++|+++|+|.+|++.++..+.......+.
T Consensus 725 KipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~ 804 (1177)
T KOG1025|consen 725 KIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWC 804 (1177)
T ss_pred cceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHHhcccchHHHHHHHhhccccHHHHHHHH
Confidence 56899998774 345678999999999999999998 23334899999999999999999988887777777666
Q ss_pred HHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCch
Q 042809 79 KEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFA 152 (241)
Q Consensus 79 ~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~ 152 (241)
.|| ||++++|||||-.+||||.+...+|+.|||+++....... ......-.-.+-|+|-|.+....|+++
T Consensus 805 ~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~----ey~~~~gK~pikwmale~i~~~~~thq 880 (1177)
T KOG1025|consen 805 YQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEK----EYSAPGGKVPIKWMALESIRIRKYTHQ 880 (1177)
T ss_pred HHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcccc----cccccccccCcHHHHHHHhhccCCCch
Confidence 654 8999999999999999999999999999999987654211 111111223567999999999999999
Q ss_pred hhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHh
Q 042809 153 TDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225 (241)
Q Consensus 153 ~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l 225 (241)
+||||||+++||++| |..|+.+...+.+...++ .+.+...|+..+-+++-++.+||..|+..||+++++.
T Consensus 881 SDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle---~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~ 951 (1177)
T KOG1025|consen 881 SDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLE---KGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELA 951 (1177)
T ss_pred hhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHh---ccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHH
Confidence 999999999999999 999998865555544444 4566778888999999999999999999999998875
No 390
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-32 Score=200.52 Aligned_cols=226 Identities=24% Similarity=0.355 Sum_probs=171.8
Q ss_pred CCCCCCcEEEEEecc----chHHHHHHHHHHHHHhhcCCCcccc----------cCCceeeeeecccCCCCHHHHHHHhC
Q 042809 1 MNKGTGALFVVKSAE----SEAGVQALRNEAEIRQSLNSPNIGR----------NGEKTVNIFMEYMAGGSLLDVAEKFG 66 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~----~~~~~~~~~~e~~~l~~l~h~~i~~----------~~~~~~~lv~e~~~~~~L~~~l~~~~ 66 (241)
.|..+|+.|++|++. +-...+++++|++++..++|.|++. ..=..+|+|+|.|. .+|...+-+ .
T Consensus 73 TDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TELmQ-SDLHKIIVS-P 150 (449)
T KOG0664|consen 73 TDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELMQ-SDLHKIIVS-P 150 (449)
T ss_pred cCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHHHH-hhhhheecc-C
Confidence 378899999999866 3345688999999999999999977 12246889999996 599988887 5
Q ss_pred CCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccC
Q 042809 67 GTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMA 140 (241)
Q Consensus 67 ~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 140 (241)
+.++...++.++.|| ||+.+|.||||||.|.+++++..+||||||++..-+.... .......-|..|+|
T Consensus 151 Q~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~-----~hMTqEVVTQYYRA 225 (449)
T KOG0664|consen 151 QALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDR-----LNMTHEVVTQYYRA 225 (449)
T ss_pred CCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhh-----hhhHHHHHHHHhcc
Confidence 788888888888877 6999999999999999999999999999999986544221 11222334778999
Q ss_pred ccccccc-CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHH------------hcC----------CCCCC--
Q 042809 141 PEVLRNE-GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIA------------CSN----------EKPHF-- 195 (241)
Q Consensus 141 PE~~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------------~~~----------~~~~~-- 195 (241)
||++.|. .|+.+.||||+||++.|++..+..|.....-....++... +.+ ..+.+
T Consensus 226 PEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~v 305 (449)
T KOG0664|consen 226 PELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQR 305 (449)
T ss_pred HHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccc
Confidence 9999884 5899999999999999999988888654332222222111 111 11111
Q ss_pred ------ChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCC
Q 042809 196 ------PTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233 (241)
Q Consensus 196 ------~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~ 233 (241)
+..-..+...+...++..+|++|.+.++++.|++....
T Consensus 306 LYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~ 349 (449)
T KOG0664|consen 306 LYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEG 349 (449)
T ss_pred eeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccccccc
Confidence 11222467788999999999999999999999998543
No 391
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.5e-31 Score=204.84 Aligned_cols=233 Identities=21% Similarity=0.329 Sum_probs=177.0
Q ss_pred CCCCCcEEEEEecc---------chHHHHHHHHHHHHHhhcCCCcccc------cCCceeeeeecccCCCCHHHHHHHhC
Q 042809 2 NKGTGALFVVKSAE---------SEAGVQALRNEAEIRQSLNSPNIGR------NGEKTVNIFMEYMAGGSLLDVAEKFG 66 (241)
Q Consensus 2 ~~~~~~~vaiK~~~---------~~~~~~~~~~e~~~l~~l~h~~i~~------~~~~~~~lv~e~~~~~~L~~~l~~~~ 66 (241)
|...++.||+|+-. ++.-.+-..+|.+|-+.|.||.||+ .+.+.+|-|+|||+|.+|+-|++. .
T Consensus 484 Dl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQ-h 562 (775)
T KOG1151|consen 484 DLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQ-H 562 (775)
T ss_pred ccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeeeecCCCchhHHHHh-h
Confidence 45567899999844 1122344789999999999999998 678899999999999999999987 4
Q ss_pred CCCCHHHHHHHHHHHh------h--cCCccccCCCCCcEEeec---CCCeeecCCCcchhhcccccCCccccc-cccccC
Q 042809 67 GTLDAGVIRLYTKEIL------H--GNGILHCDLKCNNVLLGS---HGDVKLPDLGCARRVNDLKNNGNLKQS-WQSIGG 134 (241)
Q Consensus 67 ~~~~~~~~~~~~~~~L------h--~~~~vH~dl~p~Nil~~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~-~~~~~~ 134 (241)
..+++..++.++.|++ . +-.|+|-||||.||++-. .|.+||+|||+++...+...+...... .....|
T Consensus 563 klmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAG 642 (775)
T KOG1151|consen 563 KLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAG 642 (775)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCc
Confidence 6678888888888774 3 345999999999999943 477999999999988764444333222 234568
Q ss_pred cccccCcccccc----cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHh-cCCCCCC--ChhhHHHHHHHH
Q 042809 135 TQLWMAPEVLRN----EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIAC-SNEKPHF--PTQFFKKVLDFL 207 (241)
Q Consensus 135 ~~~~~aPE~~~~----~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~li 207 (241)
|..|+|||++.- .+.+.++||||+|+++|.++.|+.||......... +..+.. ....-.+ -+.++.+..+||
T Consensus 643 TYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdI-LqeNTIlkAtEVqFP~KPvVsseAkaFI 721 (775)
T KOG1151|consen 643 TYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDI-LQENTILKATEVQFPPKPVVSSEAKAFI 721 (775)
T ss_pred eeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHH-HhhhchhcceeccCCCCCccCHHHHHHH
Confidence 999999999853 34678999999999999999999999764332211 111111 1111122 245778999999
Q ss_pred HHhhccCCCCCCChHHHhcCCCCCCCCcc
Q 042809 208 AKCLERKPEKRWSAEELLNHTFISGNAKK 236 (241)
Q Consensus 208 ~~~l~~~p~~Rps~~~~l~~p~~~~~~~~ 236 (241)
++||+.--++|..+.++..||+|.+....
T Consensus 722 RRCLaYRKeDR~DV~qLA~dpyllPh~rr 750 (775)
T KOG1151|consen 722 RRCLAYRKEDRIDVQQLACDPYLLPHIRR 750 (775)
T ss_pred HHHHHhhhhhhhhHHHHccCccccchhhh
Confidence 99999999999999999999999876543
No 392
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.97 E-value=8.8e-31 Score=233.85 Aligned_cols=209 Identities=20% Similarity=0.297 Sum_probs=151.5
Q ss_pred CCCCCcEEEEEeccchHHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHH
Q 042809 2 NKGTGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRL 76 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 76 (241)
++.+|..||+|.+..... ....|++.+++++||||++ ......++||||+++|+|.+++.. +++.....
T Consensus 711 ~~~~~~~vavK~~~~~~~--~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~----l~~~~~~~ 784 (968)
T PLN00113 711 SIKNGMQFVVKEINDVNS--IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN----LSWERRRK 784 (968)
T ss_pred ECCCCcEEEEEEccCCcc--ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc----CCHHHHHH
Confidence 356889999998874332 2235688999999999998 566788999999999999999974 45555554
Q ss_pred HHH------HHhh---cCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccccc
Q 042809 77 YTK------EILH---GNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNE 147 (241)
Q Consensus 77 ~~~------~~Lh---~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~ 147 (241)
++. ++|| +.+++||||||+||+++.++..++. |+....... .....+++.|+|||++.+.
T Consensus 785 i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~----------~~~~~~t~~y~aPE~~~~~ 853 (968)
T PLN00113 785 IAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT----------DTKCFISSAYVAPETRETK 853 (968)
T ss_pred HHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc----------CCCccccccccCcccccCC
Confidence 444 4589 6799999999999999988887765 444322111 0112468899999999998
Q ss_pred CCCchhhHHHHHHHHHHHHhCCCCCccchhc--hHHHHHHHHhc------------CCCCCCChhhHHHHHHHHHHhhcc
Q 042809 148 GLDFATDIWSLGCMVIEMATGRPPWGDKISN--AAATLLKIACS------------NEKPHFPTQFFKKVLDFLAKCLER 213 (241)
Q Consensus 148 ~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~------------~~~~~~~~~~~~~~~~li~~~l~~ 213 (241)
.++.++||||||+++||++||+.||...... ........... ......+.....++.+++.+||+.
T Consensus 854 ~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~ 933 (968)
T PLN00113 854 DITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTAT 933 (968)
T ss_pred CCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcC
Confidence 9999999999999999999999998532111 11111111000 001122334445788999999999
Q ss_pred CCCCCCChHHHhcC
Q 042809 214 KPEKRWSAEELLNH 227 (241)
Q Consensus 214 ~p~~Rps~~~~l~~ 227 (241)
+|.+|||+.++++.
T Consensus 934 ~P~~RPt~~evl~~ 947 (968)
T PLN00113 934 DPTARPCANDVLKT 947 (968)
T ss_pred CchhCcCHHHHHHH
Confidence 99999999999865
No 393
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-29 Score=196.72 Aligned_cols=98 Identities=23% Similarity=0.324 Sum_probs=79.4
Q ss_pred CCCCCcEEEEEeccchH-HHHHHHHHHHHHhhcC-----C---Ccccc---------cCCceeeeeecccCCCCHHHHHH
Q 042809 2 NKGTGALFVVKSAESEA-GVQALRNEAEIRQSLN-----S---PNIGR---------NGEKTVNIFMEYMAGGSLLDVAE 63 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~-----h---~~i~~---------~~~~~~~lv~e~~~~~~L~~~l~ 63 (241)
|..+.+.||+|+.++-. -.+....|+++|++++ | .+||+ .++.++|+|+|++ |.+|-.+|.
T Consensus 99 Dtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~ 177 (590)
T KOG1290|consen 99 DTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIK 177 (590)
T ss_pred eccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHH
Confidence 66788999999999754 4567899999999995 2 23554 7788999999999 679988887
Q ss_pred Hh-CCCCCHHHHHHHHHHH------hh-cCCccccCCCCCcEEee
Q 042809 64 KF-GGTLDAGVIRLYTKEI------LH-GNGILHCDLKCNNVLLG 100 (241)
Q Consensus 64 ~~-~~~~~~~~~~~~~~~~------Lh-~~~~vH~dl~p~Nil~~ 100 (241)
.. -..++...++.+++|+ || +.||+|.||||+|||+.
T Consensus 178 ~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 178 YSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred HhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 64 3568888888888776 56 47999999999999996
No 394
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=3.9e-30 Score=224.60 Aligned_cols=185 Identities=19% Similarity=0.211 Sum_probs=130.0
Q ss_pred CceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCC------------
Q 042809 43 EKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGD------------ 104 (241)
Q Consensus 43 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~------------ 104 (241)
...++.++||+ +++|.+++......++...+..++.|+ ||++||+||||||+|||++..|.
T Consensus 52 ~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~ 130 (793)
T PLN00181 52 DDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDS 130 (793)
T ss_pred cchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcc
Confidence 35678889998 569999998655668888888888766 79999999999999999965444
Q ss_pred -------eeecCCCcchhhcccccC----------CccccccccccCcccccCcccccccCCCchhhHHHHHHHHHHHHh
Q 042809 105 -------VKLPDLGCARRVNDLKNN----------GNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT 167 (241)
Q Consensus 105 -------~kl~dfg~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~ 167 (241)
+|++|||++......... ...........||+.|+|||.+.+..++.++|||||||++|||++
T Consensus 131 ~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~ 210 (793)
T PLN00181 131 GSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFC 210 (793)
T ss_pred cccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhh
Confidence 555555555432110000 000001112357888999999999999999999999999999999
Q ss_pred CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCC
Q 042809 168 GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233 (241)
Q Consensus 168 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~ 233 (241)
|..|+..... ..... ... .. +...........+++.+||..+|.+|||+.++++||||...
T Consensus 211 ~~~~~~~~~~-~~~~~-~~~--~~-~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~ 271 (793)
T PLN00181 211 PVSSREEKSR-TMSSL-RHR--VL-PPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP 271 (793)
T ss_pred CCCchhhHHH-HHHHH-HHh--hc-ChhhhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence 9888754211 11111 111 11 11111123456789999999999999999999999999764
No 395
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.97 E-value=6.1e-30 Score=196.56 Aligned_cols=226 Identities=30% Similarity=0.409 Sum_probs=167.2
Q ss_pred CCcEEEEEeccchHHHHHHHHHHHHHhhcC-CCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHH
Q 042809 5 TGALFVVKSAESEAGVQALRNEAEIRQSLN-SPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYT 78 (241)
Q Consensus 5 ~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~-h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 78 (241)
.+..||+|.+..-+...++.+|+++|..+. +.||++ ..++.+.+|+||+++.+..++... ++...++.++
T Consensus 63 ~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~~----l~~~~i~~Yl 138 (418)
T KOG1167|consen 63 KRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEHDRFRDLYRS----LSLAEIRWYL 138 (418)
T ss_pred ccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCccCHHHHHhc----CCHHHHHHHH
Confidence 578899999987777788999999999997 889987 788999999999999999999887 4455555555
Q ss_pred H------HHhhcCCccccCCCCCcEEeec-CCCeeecCCCcchhhcccc------c------------------------
Q 042809 79 K------EILHGNGILHCDLKCNNVLLGS-HGDVKLPDLGCARRVNDLK------N------------------------ 121 (241)
Q Consensus 79 ~------~~Lh~~~~vH~dl~p~Nil~~~-~~~~kl~dfg~~~~~~~~~------~------------------------ 121 (241)
. ..+|.+|||||||||+|++++. .+...|.|||++....... .
T Consensus 139 ~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~ 218 (418)
T KOG1167|consen 139 RNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASK 218 (418)
T ss_pred HHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccC
Confidence 4 4479999999999999999976 4779999999998211100 0
Q ss_pred --------CCccccccccccCcccccCcccccc-cCCCchhhHHHHHHHHHHHHhCCCCCccchhchH--HHHHH-----
Q 042809 122 --------NGNLKQSWQSIGGTQLWMAPEVLRN-EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAA--ATLLK----- 185 (241)
Q Consensus 122 --------~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~--~~~~~----- 185 (241)
+...........||++|.|||++.. ...++++||||.|+++..+++++.||.....+.. .++..
T Consensus 219 p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~ 298 (418)
T KOG1167|consen 219 PAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSA 298 (418)
T ss_pred CCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChH
Confidence 1111223345669999999999865 5578899999999999999999999843222111 00000
Q ss_pred ----HHhc-CC----------------------------C--------CCCChhhHHHHHHHHHHhhccCCCCCCChHHH
Q 042809 186 ----IACS-NE----------------------------K--------PHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224 (241)
Q Consensus 186 ----~~~~-~~----------------------------~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 224 (241)
.... +. . .......+..+.+|+.+|+..||.+|.|++++
T Consensus 299 ~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeA 378 (418)
T KOG1167|consen 299 EMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDA 378 (418)
T ss_pred HHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHH
Confidence 0000 00 0 00011123478999999999999999999999
Q ss_pred hcCCCCCCCC
Q 042809 225 LNHTFISGNA 234 (241)
Q Consensus 225 l~~p~~~~~~ 234 (241)
|.||||....
T Consensus 379 LkHpFF~~~~ 388 (418)
T KOG1167|consen 379 LKHPFFDEAD 388 (418)
T ss_pred hcCcCCcchh
Confidence 9999998543
No 396
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=3.5e-29 Score=176.02 Aligned_cols=167 Identities=29% Similarity=0.405 Sum_probs=133.7
Q ss_pred CCCCCCcEEEEEeccc---hHHHHHHHHHHHHHhhc-CCCcccc-----cCCceeeeeecccCCCCHHHHHHH---hCCC
Q 042809 1 MNKGTGALFVVKSAES---EAGVQALRNEAEIRQSL-NSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEK---FGGT 68 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~---~~~~ 68 (241)
++..+|.++|+|.+.. ....+++.+|+.+..+. .+|.+|. ...+.+|+.||.|+ .+|+.+.+. .++.
T Consensus 66 rh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~-tSldkfy~~v~~~g~~ 144 (282)
T KOG0984|consen 66 RHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMD-TSLDKFYRKVLKKGGT 144 (282)
T ss_pred eeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhh-hhHHHHHHHHHhcCCc
Confidence 3678999999999773 44567788888886655 5999988 67889999999995 688876654 3667
Q ss_pred CCHHHHHHHHHHH------hhc-CCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCc
Q 042809 69 LDAGVIRLYTKEI------LHG-NGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141 (241)
Q Consensus 69 ~~~~~~~~~~~~~------Lh~-~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aP 141 (241)
.++..+-.++..+ ||+ ..++|||+||+||+++.+|++|+||||.+....+. .......|...|+||
T Consensus 145 ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS-------iAkt~daGCkpYmaP 217 (282)
T KOG0984|consen 145 IPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDS-------IAKTMDAGCKPYMAP 217 (282)
T ss_pred CchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhh-------hHHHHhcCCCccCCh
Confidence 7777776666544 564 67999999999999999999999999999876552 122234578899999
Q ss_pred ccccc----cCCCchhhHHHHHHHHHHHHhCCCCCccc
Q 042809 142 EVLRN----EGLDFATDIWSLGCMVIEMATGRPPWGDK 175 (241)
Q Consensus 142 E~~~~----~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 175 (241)
|.+.. ..|+.++||||||++++||.+++.||...
T Consensus 218 Eri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 218 ERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred hhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence 99853 46889999999999999999999999654
No 397
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=3.5e-28 Score=180.35 Aligned_cols=184 Identities=40% Similarity=0.600 Sum_probs=153.1
Q ss_pred CCCcEEEEEeccchHH---HHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHH
Q 042809 4 GTGALFVVKSAESEAG---VQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIR 75 (241)
Q Consensus 4 ~~~~~vaiK~~~~~~~---~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 75 (241)
.+|+.+++|.+..... .+.+.+|+..++.+.|+++++ ......++++||+.+++|.+++......++.....
T Consensus 16 ~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~ 95 (215)
T cd00180 16 KTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEIL 95 (215)
T ss_pred CCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHH
Confidence 4689999999886654 478999999999999999987 44578999999999899999998753456666665
Q ss_pred HHHH------HHhhcCCccccCCCCCcEEeec-CCCeeecCCCcchhhcccccCCccccccccccCcccccCccccccc-
Q 042809 76 LYTK------EILHGNGILHCDLKCNNVLLGS-HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNE- 147 (241)
Q Consensus 76 ~~~~------~~Lh~~~~vH~dl~p~Nil~~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~- 147 (241)
.++. +.||+.|++|+||+|.||+++. ++.++|+|||.+........ ......+...|.+||.....
T Consensus 96 ~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~------~~~~~~~~~~~~~pe~~~~~~ 169 (215)
T cd00180 96 RILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS------LLKTIVGTPAYMAPEVLLGKG 169 (215)
T ss_pred HHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc------hhhcccCCCCccChhHhcccC
Confidence 5554 3489999999999999999999 89999999999975543211 12234467889999999877
Q ss_pred CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcC
Q 042809 148 GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNH 227 (241)
Q Consensus 148 ~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 227 (241)
..+.++|+|++|++++++ ..+.+++.+|+..+|.+||++++++.+
T Consensus 170 ~~~~~~D~~~lg~~~~~l-----------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 170 YYSEKSDIWSLGVILYEL-----------------------------------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred CCCchhhhHHHHHHHHHH-----------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 778899999999999998 578899999999999999999999987
Q ss_pred C
Q 042809 228 T 228 (241)
Q Consensus 228 p 228 (241)
+
T Consensus 215 ~ 215 (215)
T cd00180 215 L 215 (215)
T ss_pred C
Confidence 5
No 398
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.96 E-value=3.5e-30 Score=207.82 Aligned_cols=224 Identities=33% Similarity=0.508 Sum_probs=178.6
Q ss_pred CCCCCCcEEEEEeccch--HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 1 MNKGTGALFVVKSAESE--AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
+|+.+++..|+|+++-+ ...+.+.+|+-+++..+||||+. ...+.+|++||||.||+|.+.-.- .+++++..
T Consensus 35 Rd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQdiy~~-Tgplselq 113 (829)
T KOG0576|consen 35 RDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYHV-TGPLSELQ 113 (829)
T ss_pred cccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCcccceeee-cccchhHH
Confidence 58899999999998743 45778899999999999999998 678899999999999999887665 46788877
Q ss_pred HHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccc--
Q 042809 74 IRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR-- 145 (241)
Q Consensus 74 ~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-- 145 (241)
+....+ .+||+.|=+|||||..||+++..|.+|+.|||.+-.+.- +-.....++||+.|+|||...
T Consensus 114 iayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqita------ti~KrksfiGtpywmapEvaave 187 (829)
T KOG0576|consen 114 IAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITA------TIAKRKSFIGTPYWMAPEVAAVE 187 (829)
T ss_pred HHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhh------hhhhhhcccCCccccchhHHHHH
Confidence 777666 458999999999999999999999999999999865543 123346788999999999873
Q ss_pred -ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCC---CCChhhHHHHHHHHHHhhccCCCCCCCh
Q 042809 146 -NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKP---HFPTQFFKKVLDFLAKCLERKPEKRWSA 221 (241)
Q Consensus 146 -~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~ 221 (241)
.+.|...+|+|++|+...|+-.-++|..+. .......-....+..+ .-....++.+-+|++.++.++|++|||+
T Consensus 188 rkggynqlcdiwa~gitAiel~eLqpplfdl--hpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRpta 265 (829)
T KOG0576|consen 188 RKGGYNQLCDIWALGITAIELGELQPPLFDL--HPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTA 265 (829)
T ss_pred hcccccccccccccccchhhhhhcCCccccc--chHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCCh
Confidence 455788999999999999998888886542 2222222222222222 1223456789999999999999999999
Q ss_pred HHHhcCCCCCCC
Q 042809 222 EELLNHTFISGN 233 (241)
Q Consensus 222 ~~~l~~p~~~~~ 233 (241)
+.+|.|||....
T Consensus 266 eklL~h~fvs~~ 277 (829)
T KOG0576|consen 266 EKLLQHPFVSQT 277 (829)
T ss_pred hhheeceeeccc
Confidence 999999998765
No 399
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=4.8e-28 Score=188.68 Aligned_cols=211 Identities=25% Similarity=0.333 Sum_probs=151.7
Q ss_pred CCCcEEEEEeccchHHHHHHHHHHHHHh--hcCCCcccc---------cCCceeeeeecccCCCCHHHHHHHhCCCCCHH
Q 042809 4 GTGALFVVKSAESEAGVQALRNEAEIRQ--SLNSPNIGR---------NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAG 72 (241)
Q Consensus 4 ~~~~~vaiK~~~~~~~~~~~~~e~~~l~--~l~h~~i~~---------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 72 (241)
-+++.||||++.... .+.+.+|-+|++ .++|+||++ .....++||++|.+.|+|.+||.. ...++.
T Consensus 231 L~~~~VAVKifp~~~-kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~--ntisw~ 307 (534)
T KOG3653|consen 231 LDNRLVAVKIFPEQE-KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKA--NTISWN 307 (534)
T ss_pred ccCceeEEEecCHHH-HHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHHh--ccccHH
Confidence 357899999998554 567878877766 457999987 235589999999999999999997 345565
Q ss_pred HHHHHHH------HHhhc---------CCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCccc
Q 042809 73 VIRLYTK------EILHG---------NGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQL 137 (241)
Q Consensus 73 ~~~~~~~------~~Lh~---------~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (241)
....++. ++||+ ..|+|||||..|||+.+|++..|+|||++..+....... ......||.+
T Consensus 308 ~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~----d~~~qVGT~R 383 (534)
T KOG3653|consen 308 SLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQG----DTHGQVGTRR 383 (534)
T ss_pred HHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCc----chhhhhhhhh
Confidence 5544443 55764 569999999999999999999999999998876533322 2233779999
Q ss_pred ccCcccccccC-CC-----chhhHHHHHHHHHHHHhCC------------CCCcc-----chhchHHHHHHHHhcCCCCC
Q 042809 138 WMAPEVLRNEG-LD-----FATDIWSLGCMVIEMATGR------------PPWGD-----KISNAAATLLKIACSNEKPH 194 (241)
Q Consensus 138 ~~aPE~~~~~~-~~-----~~~Di~slG~~l~~l~~g~------------~p~~~-----~~~~~~~~~~~~~~~~~~~~ 194 (241)
|||||.+.|.- +. .+.||||+|.++||+++.- .||.. .+.+.+....- ....+|.
T Consensus 384 YMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV--~kK~RP~ 461 (534)
T KOG3653|consen 384 YMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVV--RKKQRPK 461 (534)
T ss_pred hcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHH--hhccCCC
Confidence 99999997633 12 4689999999999999732 23321 11111111111 1233444
Q ss_pred CChh-----hHHHHHHHHHHhhccCCCCCCChHH
Q 042809 195 FPTQ-----FFKKVLDFLAKCLERKPEKRWSAEE 223 (241)
Q Consensus 195 ~~~~-----~~~~~~~li~~~l~~~p~~Rps~~~ 223 (241)
++.. ....+++.+..||..|++.|.|+.=
T Consensus 462 ~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~C 495 (534)
T KOG3653|consen 462 IPDAWRKHAGMAVLCETIEECWDHDAEARLTAGC 495 (534)
T ss_pred ChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHH
Confidence 4432 2356899999999999999998754
No 400
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.96 E-value=5.4e-29 Score=180.22 Aligned_cols=164 Identities=26% Similarity=0.281 Sum_probs=125.2
Q ss_pred CCHHHHHHHhCCCCCHHHHHHHHHHHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCc
Q 042809 56 GSLLDVAEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGT 135 (241)
Q Consensus 56 ~~L~~~l~~~~~~~~~~~~~~~~~~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~ 135 (241)
|+|.+++...+..+++..+..++.|+++...++|..-||+||+++.++.+++ ||.+...... ...|+
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~kp~Nil~~~~~~~~~--fG~~~~~~~~-----------~~~g~ 67 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQAKSGNILLTWDGLLKL--DGSVAFKTPE-----------QSRVD 67 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccEeEcCccceee--ccceEeeccc-----------cCCCc
Confidence 6899999987778999999999998866666666666999999999999999 9988654331 12478
Q ss_pred ccccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhc-hHHHHHHHHhcCCCC---CCChhhHH--HHHHHHHH
Q 042809 136 QLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISN-AAATLLKIACSNEKP---HFPTQFFK--KVLDFLAK 209 (241)
Q Consensus 136 ~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~--~~~~li~~ 209 (241)
+.|+|||.+.+..++.++||||||+++|++++|+.||...... ..............+ ..+...+. .+.+++.+
T Consensus 68 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 147 (176)
T smart00750 68 PYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRV 147 (176)
T ss_pred ccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHH
Confidence 9999999999999999999999999999999999999654221 111111111111111 11223333 69999999
Q ss_pred hhccCCCCCCChHHHhcCCCCCC
Q 042809 210 CLERKPEKRWSAEELLNHTFISG 232 (241)
Q Consensus 210 ~l~~~p~~Rps~~~~l~~p~~~~ 232 (241)
||..+|.+|||+.++++|+|+..
T Consensus 148 cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 148 CASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred HHhcccccccCHHHHHHHHHHHH
Confidence 99999999999999999998754
No 401
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.6e-28 Score=187.49 Aligned_cols=215 Identities=26% Similarity=0.370 Sum_probs=152.8
Q ss_pred CCcEEEEEeccchHHHHHHHHHHHHHh--hcCCCcccc-------c--CCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 5 TGALFVVKSAESEAGVQALRNEAEIRQ--SLNSPNIGR-------N--GEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 5 ~~~~vaiK~~~~~~~~~~~~~e~~~l~--~l~h~~i~~-------~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
.|..||||++.+.+ ....++|.+++. .|+|+||+. . .--++|||++|-++|||+|||.. ..++...
T Consensus 233 rGe~VAVKiF~srd-E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r--~tv~~~~ 309 (513)
T KOG2052|consen 233 RGEDVAVKIFSSRD-ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR--NTVTTEG 309 (513)
T ss_pred cCCceEEEEecccc-hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhh--ccCCHHH
Confidence 47899999999765 355666777655 569999976 1 12379999999999999999997 5677777
Q ss_pred HHHHHHHH------hhc--------CCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCccccc
Q 042809 74 IRLYTKEI------LHG--------NGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWM 139 (241)
Q Consensus 74 ~~~~~~~~------Lh~--------~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (241)
...+++.+ ||. -.|.|||||..||+|..+|+..|+|+|++........ ..........||.+|+
T Consensus 310 ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~--~idi~~N~rVGTKRYM 387 (513)
T KOG2052|consen 310 MLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTD--TIDIPPNPRVGTKRYM 387 (513)
T ss_pred HHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCC--cccCCCCCccceeecc
Confidence 66666543 552 2499999999999999999999999999986655332 2223334567999999
Q ss_pred CcccccccC------CCchhhHHHHHHHHHHHHh----------CCCCCccchhch--HHHHHHHHh-cCCCCCCCh---
Q 042809 140 APEVLRNEG------LDFATDIWSLGCMVIEMAT----------GRPPWGDKISNA--AATLLKIAC-SNEKPHFPT--- 197 (241)
Q Consensus 140 aPE~~~~~~------~~~~~Di~slG~~l~~l~~----------g~~p~~~~~~~~--~~~~~~~~~-~~~~~~~~~--- 197 (241)
|||++...- .-..+||||||.++||+.- -++||.+-...+ ...+.+..+ ...+|..|.
T Consensus 388 APEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~ 467 (513)
T KOG2052|consen 388 APEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWK 467 (513)
T ss_pred ChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccc
Confidence 999996421 2257899999999999884 247876533222 122222111 123333332
Q ss_pred --hhHHHHHHHHHHhhccCCCCCCChHHH
Q 042809 198 --QFFKKVLDFLAKCLERKPEKRWSAEEL 224 (241)
Q Consensus 198 --~~~~~~~~li~~~l~~~p~~Rps~~~~ 224 (241)
.....+..+++.||..+|.-|.|+-.+
T Consensus 468 s~~~l~~m~klMkeCW~~Np~aRltALri 496 (513)
T KOG2052|consen 468 SDPALRVMAKLMKECWYANPAARLTALRI 496 (513)
T ss_pred cCHHHHHHHHHHHHhhcCCchhhhHHHHH
Confidence 233567889999999999999987554
No 402
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.95 E-value=2.9e-28 Score=186.29 Aligned_cols=203 Identities=22% Similarity=0.295 Sum_probs=159.7
Q ss_pred hHHHHHHHHHHHHHhhcCCCcccc------cCCceeeeeecccCCCCHHHHHHHhCC-------CCCHHHHHHHH-----
Q 042809 17 EAGVQALRNEAEIRQSLNSPNIGR------NGEKTVNIFMEYMAGGSLLDVAEKFGG-------TLDAGVIRLYT----- 78 (241)
Q Consensus 17 ~~~~~~~~~e~~~l~~l~h~~i~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~-------~~~~~~~~~~~----- 78 (241)
+.....+..|.-++..+.|||+.. +.....++++.++.-|+|..++..+++ .++.-....++
T Consensus 328 ~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~ 407 (563)
T KOG1024|consen 328 QIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAM 407 (563)
T ss_pred HHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHH
Confidence 445567888999999999999977 677788999999999999999995432 12222223333
Q ss_pred -HHHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCchhhHHH
Q 042809 79 -KEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWS 157 (241)
Q Consensus 79 -~~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s 157 (241)
..+||+.|++|.||..+|++++..-++||+|=.+++-..+. ...........+..|++||.+....|+.++|+||
T Consensus 408 am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~----DYhcLGDnEnRPvkWMslEal~n~~yssasDvWs 483 (563)
T KOG1024|consen 408 AMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPG----DYHCLGDNENRPVKWMSLEALQNSHYSSASDVWS 483 (563)
T ss_pred HHHHHHhcCcccchhhhhcceehhheeEEeccchhccccCcc----cccccCCCCCCcccccCHHHHhhhhhcchhhhHH
Confidence 34589999999999999999999999999998888754331 1111112222466799999999999999999999
Q ss_pred HHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 158 LGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 158 lG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
||+++||++| |+.|+.+-+.... ......+.+...|..+|+++..++.-||+..|++|||.+++..
T Consensus 484 fGVllWELmtlg~~PyaeIDPfEm---~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 484 FGVLLWELMTLGKLPYAEIDPFEM---EHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred HHHHHHHHHhcCCCCccccCHHHH---HHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 9999999999 9999987544444 3444456777788899999999999999999999999999864
No 403
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=3e-28 Score=194.09 Aligned_cols=165 Identities=30% Similarity=0.406 Sum_probs=142.5
Q ss_pred CCCCCCcEEEEEeccchHHHHH----------HHHHHHHHhhcC---CCcccc-----cCCceeeeeeccc-CCCCHHHH
Q 042809 1 MNKGTGALFVVKSAESEAGVQA----------LRNEAEIRQSLN---SPNIGR-----NGEKTVNIFMEYM-AGGSLLDV 61 (241)
Q Consensus 1 ~~~~~~~~vaiK~~~~~~~~~~----------~~~e~~~l~~l~---h~~i~~-----~~~~~~~lv~e~~-~~~~L~~~ 61 (241)
+||+++..|+||.+.+++.... .--|+.||..++ |+||++ ++++.+|++||-- +|-+|+++
T Consensus 581 i~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~ 660 (772)
T KOG1152|consen 581 IHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYYYLETEVHGEGIDLFDF 660 (772)
T ss_pred eecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCeeEEEecCCCCCcchhhh
Confidence 4788899999999887654332 346999999998 999999 8899999999987 45699999
Q ss_pred HHHhCCCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCc
Q 042809 62 AEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGT 135 (241)
Q Consensus 62 l~~~~~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~ 135 (241)
+.- ...+++..+..++.|+ ||++||||||||-+|+.++.+|-+||+|||.+..... ..+..+.||
T Consensus 661 IE~-kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~ks--------gpfd~f~gt 731 (772)
T KOG1152|consen 661 IEF-KPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKS--------GPFDVFVGT 731 (772)
T ss_pred hhc-cCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchhhhcC--------CCcceeeee
Confidence 986 6788898999999887 7999999999999999999999999999999976544 345667899
Q ss_pred ccccCcccccccCC-CchhhHHHHHHHHHHHHhCCCCCcc
Q 042809 136 QLWMAPEVLRNEGL-DFATDIWSLGCMVIEMATGRPPWGD 174 (241)
Q Consensus 136 ~~~~aPE~~~~~~~-~~~~Di~slG~~l~~l~~g~~p~~~ 174 (241)
..|.|||.+.|.+| ....|||++|+++|.++....||.+
T Consensus 732 v~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 732 VDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred ccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 99999999999887 5678999999999999999998853
No 404
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=6.5e-25 Score=164.65 Aligned_cols=167 Identities=39% Similarity=0.630 Sum_probs=135.1
Q ss_pred CCCCcEEEEEeccchH---HHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHH
Q 042809 3 KGTGALFVVKSAESEA---GVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI 74 (241)
Q Consensus 3 ~~~~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 74 (241)
.++++.+++|.+.... ..+.+.+|++.+.+++|+|+++ ......++++|++.+++|.+++......++....
T Consensus 21 ~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~ 100 (225)
T smart00221 21 KGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEA 100 (225)
T ss_pred cCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHH
Confidence 3468899999988542 4678999999999999999988 4557899999999999999999875432566665
Q ss_pred HHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccc-ccc
Q 042809 75 RLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVL-RNE 147 (241)
Q Consensus 75 ~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~ 147 (241)
..++.+ +||+.+++|+||+|.||+++.++.++|+|||.+........ .......++..|++||.+ ...
T Consensus 101 ~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~ 175 (225)
T smart00221 101 RFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA-----ALLKTVKGTPFYLAPEVLLGGK 175 (225)
T ss_pred HHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc-----ccccceeccCCcCCHhHhcCCC
Confidence 555554 47999999999999999999999999999998876544210 012234467789999998 667
Q ss_pred CCCchhhHHHHHHHHHHHHhCCCCCcc
Q 042809 148 GLDFATDIWSLGCMVIEMATGRPPWGD 174 (241)
Q Consensus 148 ~~~~~~Di~slG~~l~~l~~g~~p~~~ 174 (241)
.++.++|+|+||++++++++|+.||..
T Consensus 176 ~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 176 GYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred CCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 778899999999999999999999955
No 405
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=2.4e-26 Score=168.07 Aligned_cols=218 Identities=21% Similarity=0.315 Sum_probs=156.3
Q ss_pred CCCCCcEEEEEeccchH-HHHHHHHHHHHHhhcC-CCcccc------cCCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 2 NKGTGALFVVKSAESEA-GVQALRNEAEIRQSLN-SPNIGR------NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~-h~~i~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
|+.++..+|+|.+..+. ....|.+|...--.|. |.||+. +..+.+.+++||++.|+|.+-+.. ..+-+..
T Consensus 45 Hr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~--~GigE~~ 122 (378)
T KOG1345|consen 45 HRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEA--AGIGEAN 122 (378)
T ss_pred ccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccchhhhhcCc--ccccHHH
Confidence 67899999999988764 4577899988877776 899987 677788899999999999888775 3344444
Q ss_pred HHHHHH------HHhhcCCccccCCCCCcEEee-cC-CCeeecCCCcchhhcccccCCccccccccccCcccccCccccc
Q 042809 74 IRLYTK------EILHGNGILHCDLKCNNVLLG-SH-GDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 74 ~~~~~~------~~Lh~~~~vH~dl~p~Nil~~-~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 145 (241)
...++. .++|++++||||||.+||++- .+ .++||||||.....+..... ..-+..|.+||.+.
T Consensus 123 ~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~---------~~~~~~y~~pe~~~ 193 (378)
T KOG1345|consen 123 TKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKY---------LEYVNNYHAPELCD 193 (378)
T ss_pred HHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCceehh---------hhhhcccCCcHHHh
Confidence 444433 558999999999999999993 33 46999999998755431111 11245678888774
Q ss_pred c-----cCCCchhhHHHHHHHHHHHHhCCCCCccchhchH-HHHHHHHhcCCCCCCC---hhhHHHHHHHHHHhhccCCC
Q 042809 146 N-----EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAA-ATLLKIACSNEKPHFP---TQFFKKVLDFLAKCLERKPE 216 (241)
Q Consensus 146 ~-----~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~ 216 (241)
. ....+.+|+|.||+++|.++||..||+.....+. .-.......+..+..| ...++.+..++++-|...++
T Consensus 194 ~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~ 273 (378)
T KOG1345|consen 194 TVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFK 273 (378)
T ss_pred hccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCccc
Confidence 3 2245789999999999999999999974322221 1122223333344444 34567888999999999999
Q ss_pred CC---CChHHHhcCCCC
Q 042809 217 KR---WSAEELLNHTFI 230 (241)
Q Consensus 217 ~R---ps~~~~l~~p~~ 230 (241)
+| .+++......|.
T Consensus 274 drcki~~~kk~rk~~w~ 290 (378)
T KOG1345|consen 274 DRCKIWTAKKMRKCLWK 290 (378)
T ss_pred ccchhHHHHHHHHHHHH
Confidence 99 566665555554
No 406
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=2.4e-26 Score=192.25 Aligned_cols=208 Identities=27% Similarity=0.360 Sum_probs=155.0
Q ss_pred HHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHHHHH------hhcCCccccC
Q 042809 23 LRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCD 91 (241)
Q Consensus 23 ~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~------Lh~~~~vH~d 91 (241)
+..|.-+-..+.|+|++. .......-+||||++ +|+.++... ..+....+..++.|+ +|+.|+.|||
T Consensus 368 i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~~~~-Dlf~~~~~~-~~~~~~e~~c~fKqL~~Gv~y~h~~Giahrd 445 (601)
T KOG0590|consen 368 ITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEYCPY-DLFSLVMSN-GKLTPLEADCFFKQLLRGVKYLHSMGLAHRD 445 (601)
T ss_pred hhhheeecccccCCchhhhHHHHhhcccchhhhhcccH-HHHHHHhcc-cccchhhhhHHHHHHHHHHHHHHhcCceecc
Confidence 455666677789999876 333333334999998 999999973 456666666666655 7999999999
Q ss_pred CCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCc-hhhHHHHHHHHHHHHhCCC
Q 042809 92 LKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDF-ATDIWSLGCMVIEMATGRP 170 (241)
Q Consensus 92 l~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~-~~Di~slG~~l~~l~~g~~ 170 (241)
+|++|++++.+|.+||+|||.+.......... ........|+..|+|||.+.+..|.+ ..||||.|+++.-|.+|+.
T Consensus 446 lK~enll~~~~g~lki~Dfg~~~vf~~~~e~~--~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~ 523 (601)
T KOG0590|consen 446 LKLENLLVTENGILKIIDFGAASVFRYPWEKN--IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRF 523 (601)
T ss_pred CccccEEEecCCceEEeecCcceeeccCcchh--hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCC
Confidence 99999999999999999999998664422211 12334567899999999999998875 5799999999999999999
Q ss_pred CCccchhchHH--HHH---HHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCC
Q 042809 171 PWGDKISNAAA--TLL---KIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNA 234 (241)
Q Consensus 171 p~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~ 234 (241)
||......... ... .......+......++...+.+|.+||+.+|.+|.|++++++.+||+.-.
T Consensus 524 ~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~ 592 (601)
T KOG0590|consen 524 PWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE 592 (601)
T ss_pred ccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence 99654333221 000 00111122233345677899999999999999999999999999998654
No 407
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=7e-22 Score=148.64 Aligned_cols=175 Identities=20% Similarity=0.322 Sum_probs=149.2
Q ss_pred CCCCcEEEEEeccchHHHHHHHHHHHHHhhcC-CCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHH
Q 042809 3 KGTGALFVVKSAESEAGVQALRNEAEIRQSLN-SPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRL 76 (241)
Q Consensus 3 ~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~-h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 76 (241)
.-+|.+||||.-...+...++..|.+..+.|. .++|-. ..+.+-.+|+|.+ |.+|.+++.-++..++...+..
T Consensus 50 l~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~m 128 (449)
T KOG1165|consen 50 LYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAM 128 (449)
T ss_pred cccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCcccHHhHHH
Confidence 44789999999887777889999999999986 566644 5666777999999 7899999999999999999988
Q ss_pred HHHHH------hhcCCccccCCCCCcEEeecCCC-----eeecCCCcchhhcccccCC-ccccccccccCcccccCcccc
Q 042809 77 YTKEI------LHGNGILHCDLKCNNVLLGSHGD-----VKLPDLGCARRVNDLKNNG-NLKQSWQSIGGTQLWMAPEVL 144 (241)
Q Consensus 77 ~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~-----~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~aPE~~ 144 (241)
++.|. +|++.+|.|||||+|+|+...++ +.++|||+++...+..... .+.+...+..||.+||+-...
T Consensus 129 iA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTH 208 (449)
T KOG1165|consen 129 IAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTH 208 (449)
T ss_pred HHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeecc
Confidence 88866 69999999999999999976554 8899999999876654433 334566788899999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccchhc
Q 042809 145 RNEGLDFATDIWSLGCMVIEMATGRPPWGDKISN 178 (241)
Q Consensus 145 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~ 178 (241)
.|...+.+.|+-|||=++++++-|.+||.+....
T Consensus 209 lGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~ 242 (449)
T KOG1165|consen 209 LGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAD 242 (449)
T ss_pred ccchhhhhhhHHHhhhhhhhhccCCCccccccCc
Confidence 9999999999999999999999999999875443
No 408
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.88 E-value=3.7e-23 Score=175.87 Aligned_cols=212 Identities=23% Similarity=0.293 Sum_probs=146.4
Q ss_pred CCcEEEEEeccch------HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 5 TGALFVVKSAESE------AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 5 ~~~~vaiK~~~~~------~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
....|+||++-+. +...+...|++ ...+++||.++ ..+..-|+|-+|..+ +|+|.+.. +..+....
T Consensus 45 ~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRqyvkh-nLyDRlST-RPFL~~iE 121 (1431)
T KOG1240|consen 45 REGLVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQYVKH-NLYDRLST-RPFLVLIE 121 (1431)
T ss_pred CCceEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHHHHhh-hhhhhhcc-chHHHHHH
Confidence 3445889986643 23344445555 55678999987 677889999999975 99999987 45566666
Q ss_pred HHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCC-ccccccccccCcccccCcccccc
Q 042809 74 IRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNG-NLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 74 ~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
.+.++-|+ +|..|++|||||.+||++++=+.+.|+||..-+..--...+. .+.--+.....-..|+|||.+..
T Consensus 122 KkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~ 201 (1431)
T KOG1240|consen 122 KKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVS 201 (1431)
T ss_pred HHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhc
Confidence 66666666 599999999999999999999999999998765321111111 01111122223345999999843
Q ss_pred c----------C-CCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCC-----hhhHHHHHHHHHH
Q 042809 147 E----------G-LDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFP-----TQFFKKVLDFLAK 209 (241)
Q Consensus 147 ~----------~-~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~ 209 (241)
. . .+++.||||+||++.|+++ |+++|.-. .+....... ...+ .-....+++++..
T Consensus 202 ~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS------QL~aYr~~~--~~~~e~~Le~Ied~~~Rnlil~ 273 (1431)
T KOG1240|consen 202 ALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS------QLLAYRSGN--ADDPEQLLEKIEDVSLRNLILS 273 (1431)
T ss_pred cccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH------HHHhHhccC--ccCHHHHHHhCcCccHHHHHHH
Confidence 1 1 4678999999999999999 89998532 111111111 1111 1112368999999
Q ss_pred hhccCCCCCCChHHHhcC
Q 042809 210 CLERKPEKRWSAEELLNH 227 (241)
Q Consensus 210 ~l~~~p~~Rps~~~~l~~ 227 (241)
|++.+|.+|.|+++.|+.
T Consensus 274 Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 274 MIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHccCchhccCHHHHHHh
Confidence 999999999999999975
No 409
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.87 E-value=7.3e-23 Score=165.32 Aligned_cols=210 Identities=25% Similarity=0.426 Sum_probs=164.5
Q ss_pred CCCcEEEEEeccchH----HHHHHHHHHHHHhhcC-CCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 4 GTGALFVVKSAESEA----GVQALRNEAEIRQSLN-SPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 4 ~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
+.|..|++|+..+.. .......|..++..++ ||.+++ +.+..+++++++..||.|...+... ..+....
T Consensus 20 da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~-~~f~~~~ 98 (612)
T KOG0603|consen 20 DAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKE-VMFDELD 98 (612)
T ss_pred cccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcccchhhhccccC-CchHHHH
Confidence 456777888766321 1124556777888887 999887 8889999999999999999988863 3444444
Q ss_pred HHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccccc
Q 042809 74 IRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNE 147 (241)
Q Consensus 74 ~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~ 147 (241)
...+.. +.+|+.+++|+|+|++||+++.+|.+++.|||.++..-+.+ ..+|+..|+|||++.
T Consensus 99 ~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~----------~~cgt~eymApEI~~-- 166 (612)
T KOG0603|consen 99 VAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK----------IACGTYEYRAPEIIN-- 166 (612)
T ss_pred HHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhh----------hcccchhhhhhHhhh--
Confidence 443333 44799999999999999999999999999999998654411 127899999999998
Q ss_pred CCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCC-----ChH
Q 042809 148 GLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRW-----SAE 222 (241)
Q Consensus 148 ~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s~~ 222 (241)
....++|.||+|++.++++||..||... -.. ........+|...+..+++++.+++..+|..|. -+.
T Consensus 167 gh~~a~D~ws~gvl~felltg~~pf~~~---~~~-----~Il~~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~ 238 (612)
T KOG0603|consen 167 GHLSAADWWSFGVLAFELLTGTLPFGGD---TMK-----RILKAELEMPRELSAEARSLFRQLFKRNPENRLGAGPDGVD 238 (612)
T ss_pred ccCCcccchhhhhhHHHHhhCCCCCchH---HHH-----HHhhhccCCchhhhHHHHHHHHHHHhhCHHHHhccCcchhH
Confidence 4677899999999999999999999871 111 122345677888999999999999999999997 457
Q ss_pred HHhcCCCCCCCC
Q 042809 223 ELLNHTFISGNA 234 (241)
Q Consensus 223 ~~l~~p~~~~~~ 234 (241)
++++|+||....
T Consensus 239 eik~h~f~~~i~ 250 (612)
T KOG0603|consen 239 EIKQHEFFQSID 250 (612)
T ss_pred HHhccchheeee
Confidence 899999996543
No 410
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=1.1e-21 Score=141.65 Aligned_cols=174 Identities=20% Similarity=0.317 Sum_probs=144.0
Q ss_pred CCCCCcEEEEEeccchHHHHHHHHHHHHHhhcCC----Ccccc--cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHH
Q 042809 2 NKGTGALFVVKSAESEAGVQALRNEAEIRQSLNS----PNIGR--NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIR 75 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h----~~i~~--~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 75 (241)
...+|..||||+-.+...-..+.-|.++...|++ |+|-. .....-.+||+.. |.+|.+++.-+...++...+.
T Consensus 36 ~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvL 114 (341)
T KOG1163|consen 36 SITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVL 114 (341)
T ss_pred eccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-CccHHHHHHHHhhhhhHHhHH
Confidence 3568999999998887777888999999999984 44433 5667788999999 799999999988889998888
Q ss_pred HHHHHH------hhcCCccccCCCCCcEEeecC---CCeeecCCCcchhhcccccCCcc-ccccccccCcccccCccccc
Q 042809 76 LYTKEI------LHGNGILHCDLKCNNVLLGSH---GDVKLPDLGCARRVNDLKNNGNL-KQSWQSIGGTQLWMAPEVLR 145 (241)
Q Consensus 76 ~~~~~~------Lh~~~~vH~dl~p~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aPE~~~ 145 (241)
.++-|+ +|.++++||||||+|++..-+ ..+.++|||+++...+....... .+.-....||.+|.+-....
T Consensus 115 MLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~ 194 (341)
T KOG1163|consen 115 MLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHL 194 (341)
T ss_pred HHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhh
Confidence 887765 699999999999999999543 56899999999987664443322 23345567999999999998
Q ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCccch
Q 042809 146 NEGLDFATDIWSLGCMVIEMATGRPPWGDKI 176 (241)
Q Consensus 146 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 176 (241)
+-..+.+.|+-|+|.++.++--|..||++-.
T Consensus 195 g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk 225 (341)
T KOG1163|consen 195 GIEQSRRDDMESVGYVLMYFNRGSLPWQGLK 225 (341)
T ss_pred hhhhhhhhhhhhhcceeeeeecCCCcccccc
Confidence 8888999999999999999999999998753
No 411
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.86 E-value=3.4e-21 Score=146.21 Aligned_cols=199 Identities=26% Similarity=0.322 Sum_probs=121.0
Q ss_pred CCCCCcEEEEEeccc-----hHHHHHHHHHHHHHhhcCC---Cc-------c-c-----c-----------cCCc-----
Q 042809 2 NKGTGALFVVKSAES-----EAGVQALRNEAEIRQSLNS---PN-------I-G-----R-----------NGEK----- 44 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~-----~~~~~~~~~e~~~l~~l~h---~~-------i-~-----~-----------~~~~----- 44 (241)
|..||+.+|+|.+.. ....+.+.+|.-....+.+ |. + + + .+..
T Consensus 33 d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~~~~~~~~~~~~~~~v~ 112 (288)
T PF14531_consen 33 DVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGKPPFFERGPGQSIYWVL 112 (288)
T ss_dssp ETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS-SEEEECETTEEEEEE
T ss_pred EccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCCCcceecCCCCccceee
Confidence 678999999998652 2345667777655554332 11 1 1 1 1112
Q ss_pred eeeeeecccCCCCHHHHHHH---hCCC---CCHHHHHHHHH------HHhhcCCccccCCCCCcEEeecCCCeeecCCCc
Q 042809 45 TVNIFMEYMAGGSLLDVAEK---FGGT---LDAGVIRLYTK------EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGC 112 (241)
Q Consensus 45 ~~~lv~e~~~~~~L~~~l~~---~~~~---~~~~~~~~~~~------~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~ 112 (241)
..+++|+-+. ++|.+++.. .... +.......+.. +.||..|++|+||+|+|++++.+|.+.|+||+.
T Consensus 113 n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~ 191 (288)
T PF14531_consen 113 NRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSS 191 (288)
T ss_dssp SEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGG
T ss_pred hhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHH
Confidence 3467788885 688887543 2222 11111122222 348999999999999999999999999999988
Q ss_pred chhhcccccCCccccccccccCcccccCcccccc--------cCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHH
Q 042809 113 ARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN--------EGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLL 184 (241)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--------~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~ 184 (241)
....+..... ...+..|.|||.... ..++.+.|.|+||+++|.++++..||...........
T Consensus 192 ~~r~g~~~~~---------~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~- 261 (288)
T PF14531_consen 192 LVRAGTRYRC---------SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW- 261 (288)
T ss_dssp EEETTEEEEG---------GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG-
T ss_pred HeecCceeec---------cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc-
Confidence 8765542111 223567899997744 2467899999999999999999999976543332211
Q ss_pred HHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCC
Q 042809 185 KIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKR 218 (241)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 218 (241)
....+. .+|+.++.||.++|+.+|.+|
T Consensus 262 ------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 262 ------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp ------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred ------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 111223 788899999999999999987
No 412
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.85 E-value=7.7e-20 Score=144.67 Aligned_cols=229 Identities=31% Similarity=0.457 Sum_probs=165.0
Q ss_pred cEEEEEeccchH-----HHHHHHHHHHHHhhcCCC-cccc-----cCCceeeeeecccCCCCHHHHHHHhC--CCCCHHH
Q 042809 7 ALFVVKSAESEA-----GVQALRNEAEIRQSLNSP-NIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFG--GTLDAGV 73 (241)
Q Consensus 7 ~~vaiK~~~~~~-----~~~~~~~e~~~l~~l~h~-~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~ 73 (241)
..+++|.+.... ....+.+|+.++..+.|+ ++++ ......+++++++.+++|.+++.... ..+....
T Consensus 23 ~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 102 (384)
T COG0515 23 KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESE 102 (384)
T ss_pred cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHH
Confidence 356777766332 356789999999999988 6877 44555899999999999997777643 2567777
Q ss_pred HHHHHHHH------hhcCCccccCCCCCcEEeecCC-CeeecCCCcchhhcccccCCccccccccccCcccccCcccccc
Q 042809 74 IRLYTKEI------LHGNGILHCDLKCNNVLLGSHG-DVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 74 ~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~ 146 (241)
...+..|+ +|+.+++|||+||+||+++..+ .++++|||.+....................++..|.+||.+.+
T Consensus 103 ~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~ 182 (384)
T COG0515 103 ALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLG 182 (384)
T ss_pred HHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcC
Confidence 66666654 7999999999999999999988 6999999998744332111100012345668999999999987
Q ss_pred ---cCCCchhhHHHHHHHHHHHHhCCCCCccchh----chHHHHHHHHhcC-CCCCCChhh----HHHHHHHHHHhhccC
Q 042809 147 ---EGLDFATDIWSLGCMVIEMATGRPPWGDKIS----NAAATLLKIACSN-EKPHFPTQF----FKKVLDFLAKCLERK 214 (241)
Q Consensus 147 ---~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~li~~~l~~~ 214 (241)
...+...|+|++|++++++++|..||..... ............. ......... ...+.+++..++..+
T Consensus 183 ~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (384)
T COG0515 183 LSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKD 262 (384)
T ss_pred CCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcC
Confidence 5678899999999999999999999766542 1222222211111 111222221 257899999999999
Q ss_pred CCCCCChHHHhcCCCCCCCCc
Q 042809 215 PEKRWSAEELLNHTFISGNAK 235 (241)
Q Consensus 215 p~~Rps~~~~l~~p~~~~~~~ 235 (241)
|..|.+..+...+++......
T Consensus 263 ~~~r~~~~~~~~~~~~~~~~~ 283 (384)
T COG0515 263 PKNRLSSSSDLSHDLLAHLKL 283 (384)
T ss_pred chhcCCHHHHhhchHhhCccc
Confidence 999999999888876655443
No 413
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.84 E-value=1e-19 Score=143.64 Aligned_cols=220 Identities=20% Similarity=0.240 Sum_probs=153.6
Q ss_pred CcEEEEEeccchHHH--HHHHHHHHHHhhcCC----Ccccc------cCCceeeeeecccCCCCHHHHHHHhC-CCCCHH
Q 042809 6 GALFVVKSAESEAGV--QALRNEAEIRQSLNS----PNIGR------NGEKTVNIFMEYMAGGSLLDVAEKFG-GTLDAG 72 (241)
Q Consensus 6 ~~~vaiK~~~~~~~~--~~~~~e~~~l~~l~h----~~i~~------~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~ 72 (241)
+..+|+|........ ..+..|..++..+.. +++.. .....-++||+.+ |.+|.++..... ..++..
T Consensus 44 ~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~ 122 (322)
T KOG1164|consen 44 NKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRK 122 (322)
T ss_pred CeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHh
Confidence 367888887654222 267888888888873 34433 2456789999999 789999887654 678888
Q ss_pred HHHHHHHHH------hhcCCccccCCCCCcEEeecCC-----CeeecCCCcchhhcccccCC---ccccc-cccccCccc
Q 042809 73 VIRLYTKEI------LHGNGILHCDLKCNNVLLGSHG-----DVKLPDLGCARRVNDLKNNG---NLKQS-WQSIGGTQL 137 (241)
Q Consensus 73 ~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~-----~~kl~dfg~~~~~~~~~~~~---~~~~~-~~~~~~~~~ 137 (241)
.+..++.|. ||+.|++||||||.|+.+.... .+.|.|||++.......... ...+. .....||..
T Consensus 123 T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~r 202 (322)
T KOG1164|consen 123 TVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLR 202 (322)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccc
Confidence 877777665 6999999999999999997653 58999999998332111111 11111 234559999
Q ss_pred ccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCC-CChhhHHHHHHHHHHhhccCCC
Q 042809 138 WMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPH-FPTQFFKKVLDFLAKCLERKPE 216 (241)
Q Consensus 138 ~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~ 216 (241)
|.++....+...+.+.|+||+++++.++..|..||...................... .....+..+..+...+-..+..
T Consensus 203 y~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (322)
T KOG1164|consen 203 YASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYE 282 (322)
T ss_pred cccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCc
Confidence 999999999999999999999999999999999996654322222222221111111 2333445666777766668888
Q ss_pred CCCChHHHhc
Q 042809 217 KRWSAEELLN 226 (241)
Q Consensus 217 ~Rps~~~~l~ 226 (241)
.+|....+..
T Consensus 283 ~~Pdy~~~~~ 292 (322)
T KOG1164|consen 283 DKPDYEKLAE 292 (322)
T ss_pred CCCCHHHHHH
Confidence 8887666543
No 414
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.84 E-value=1.1e-20 Score=149.18 Aligned_cols=140 Identities=17% Similarity=0.116 Sum_probs=98.1
Q ss_pred CCcEEEEEeccc-------hHHHHHHHHHHHHHhhcCCCcccc--cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHH
Q 042809 5 TGALFVVKSAES-------EAGVQALRNEAEIRQSLNSPNIGR--NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIR 75 (241)
Q Consensus 5 ~~~~vaiK~~~~-------~~~~~~~~~e~~~l~~l~h~~i~~--~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 75 (241)
++..||||.... ......+.+|++++++++|+|++. ...+..|+||||++|++|... .. ..........
T Consensus 43 ~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~~~~~LVmE~~~G~~L~~~-~~-~~~~~~~~~i 120 (365)
T PRK09188 43 PGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLATGKDGLVRGWTEGVPLHLA-RP-HGDPAWFRSA 120 (365)
T ss_pred CCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEcCCcEEEEEccCCCCHHHh-Cc-cchHHHHHHH
Confidence 678889998542 234567999999999999999986 334568999999999999632 11 1111111222
Q ss_pred HHHHHHhhcCCccccCC-CCCcEEeecCCCeeecCCCcchhhcccccCCcc--ccccccccCcccccCcccccc
Q 042809 76 LYTKEILHGNGILHCDL-KCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNL--KQSWQSIGGTQLWMAPEVLRN 146 (241)
Q Consensus 76 ~~~~~~Lh~~~~vH~dl-~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~--~~~~~~~~~~~~~~aPE~~~~ 146 (241)
.-+..+||+.|++|||| ||+||+++.++.++|+|||++............ ........+++.|.+||.+..
T Consensus 121 ~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 121 HRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred HHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 23345689999999999 999999999999999999999866442111110 011124557788999998853
No 415
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.84 E-value=5.5e-21 Score=162.30 Aligned_cols=174 Identities=24% Similarity=0.336 Sum_probs=133.8
Q ss_pred CCHHHHHHHhCCCCCHHHHHHHHHHHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCC---------ccc
Q 042809 56 GSLLDVAEKFGGTLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNG---------NLK 126 (241)
Q Consensus 56 ~~L~~~l~~~~~~~~~~~~~~~~~~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~---------~~~ 126 (241)
|+=.+.++. -+.++... .++.+|||+.|++|+|+||+|.+++.-|.+|++|||+.+..-...... ...
T Consensus 136 gDc~tllk~-~g~lPvdm--vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~E 212 (1205)
T KOG0606|consen 136 GDCATLLKN-IGPLPVDM--VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHE 212 (1205)
T ss_pred chhhhhccc-CCCCcchh--hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHH
Confidence 344444443 23344333 567799999999999999999999999999999999987542211100 000
Q ss_pred cccccccCcccccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHH
Q 042809 127 QSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDF 206 (241)
Q Consensus 127 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 206 (241)
-.-...+||+.|.|||++....|...+|.|++|+++|+++.|..||.+.+.+.............+.. ...++++++++
T Consensus 213 f~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~-dea~p~Ea~dl 291 (1205)
T KOG0606|consen 213 FQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEE-DEALPPEAQDL 291 (1205)
T ss_pred hhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccccc-CcCCCHHHHHH
Confidence 11235689999999999999999999999999999999999999999987777665555444444444 56678899999
Q ss_pred HHHhhccCCCCCC---ChHHHhcCCCCCCC
Q 042809 207 LAKCLERKPEKRW---SAEELLNHTFISGN 233 (241)
Q Consensus 207 i~~~l~~~p~~Rp---s~~~~l~~p~~~~~ 233 (241)
+.++|+.+|..|. .+-++.+|+||+.-
T Consensus 292 i~~LL~qnp~~Rlgt~ga~evk~h~ff~~L 321 (1205)
T KOG0606|consen 292 IEQLLRQNPLCRLGTGGALEVKQHGFFQLL 321 (1205)
T ss_pred HHHHHHhChHhhcccchhhhhhhccceeec
Confidence 9999999999996 67788999999653
No 416
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.83 E-value=5.2e-20 Score=141.93 Aligned_cols=177 Identities=21% Similarity=0.284 Sum_probs=122.8
Q ss_pred CCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecC--C--CeeecCCC
Q 042809 42 GEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSH--G--DVKLPDLG 111 (241)
Q Consensus 42 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~--~--~~kl~dfg 111 (241)
....+|+||.-.+ .+|..|+-.+. .+......++.|+ ||.+|+.|||+|.+||++.-+ + .+.++|||
T Consensus 314 ~~~tlylvMkrY~-~tLr~yl~~~~--~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFG 390 (598)
T KOG4158|consen 314 EPKTLYLVMKRYR-QTLREYLWTRH--RSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFG 390 (598)
T ss_pred CCceEEEehhcch-hhHHHHHhcCC--CchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccc
Confidence 3467999998885 59999998732 3334444444444 799999999999999999543 3 37899999
Q ss_pred cchhhcccccCCccccccccccCcccccCcccccccC------CCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHH
Q 042809 112 CARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEG------LDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLK 185 (241)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~------~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~ 185 (241)
.+.--....-........-...|.-..+|||+....+ -..++|.|+.|.+.||+++...||....+ ..... +
T Consensus 391 CcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGe-m~L~~-r 468 (598)
T KOG4158|consen 391 CCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGE-MLLDT-R 468 (598)
T ss_pred eeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccch-heech-h
Confidence 8853322111111111222345677789999986432 12589999999999999999999976322 11111 1
Q ss_pred HHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHH
Q 042809 186 IACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEE 223 (241)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ 223 (241)
.-.....|.+|..+++.+++++..+|+.||.+|+|..-
T Consensus 469 ~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~i 506 (598)
T KOG4158|consen 469 TYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNI 506 (598)
T ss_pred hhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCccH
Confidence 12224567788889999999999999999999997543
No 417
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.83 E-value=3.2e-21 Score=153.08 Aligned_cols=182 Identities=25% Similarity=0.322 Sum_probs=131.7
Q ss_pred CceeeeeecccCCCCHHHHHHHh--CCCCCHHHHHHHHHHHh---hcCCccccCCCCCcEEeecCCCeeecCCCcchhhc
Q 042809 43 EKTVNIFMEYMAGGSLLDVAEKF--GGTLDAGVIRLYTKEIL---HGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVN 117 (241)
Q Consensus 43 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~L---h~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 117 (241)
..++|+.|++|.-.+|.+++... ....+......++.|+- .-+|.+|+|++|.||+...++.+||+|||+.+...
T Consensus 328 ~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~yk~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~ 407 (516)
T KOG1033|consen 328 KVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEYKGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQD 407 (516)
T ss_pred ccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhhccchhhhccccccccccchhhhhhhhhheeecc
Confidence 34789999999999999999743 23345555555666553 23899999999999999999999999999998765
Q ss_pred ccccCCccccccccccCcccccCcccccccCCCchhhHHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCC
Q 042809 118 DLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFP 196 (241)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (241)
................||..|++||.+.+..|+.++||||||++++|++. -..++ +.............++.+-
T Consensus 408 ~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~-----er~~t~~d~r~g~ip~~~~ 482 (516)
T KOG1033|consen 408 KDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQF-----ERIATLTDIRDGIIPPEFL 482 (516)
T ss_pred cCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHH-----HHHHhhhhhhcCCCChHHh
Confidence 54322222334456679999999999999999999999999999999998 22222 1111111111112222222
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCC
Q 042809 197 TQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFI 230 (241)
Q Consensus 197 ~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~ 230 (241)
. -.+.-..|+++++...|.+||++.+.-.|+|.
T Consensus 483 ~-d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 483 Q-DYPEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred h-cCcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 2 22456689999999999999988888887775
No 418
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.82 E-value=1.8e-20 Score=137.84 Aligned_cols=207 Identities=21% Similarity=0.320 Sum_probs=149.6
Q ss_pred CcEEEEEeccch----HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCC-CCCHHHHH
Q 042809 6 GALFVVKSAESE----AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGG-TLDAGVIR 75 (241)
Q Consensus 6 ~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~ 75 (241)
|-.++.|++.-. +....|..|.-.++.+.||||+. ....++.++..||+.|+|+..+.+... ..+...+.
T Consensus 213 gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav 292 (448)
T KOG0195|consen 213 GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAV 292 (448)
T ss_pred CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcCccEEEecchHH
Confidence 344556665522 22345778888899889999987 667889999999999999999987532 24444444
Q ss_pred HHHH------HHhhcCC--ccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCccccccc
Q 042809 76 LYTK------EILHGNG--ILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNE 147 (241)
Q Consensus 76 ~~~~------~~Lh~~~--~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~ 147 (241)
.+++ .+||+.. +.---|+...+++|.+-+.+|+--+.-..+.+ ....-.|.|++||.++..
T Consensus 293 ~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe-----------~gr~y~pawmspealqrk 361 (448)
T KOG0195|consen 293 RFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQE-----------VGRAYSPAWMSPEALQRK 361 (448)
T ss_pred HHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeec-----------cccccCcccCCHHHHhcC
Confidence 4444 4478754 33335888999999988877743222111111 111236789999999876
Q ss_pred CCC---chhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHH
Q 042809 148 GLD---FATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEEL 224 (241)
Q Consensus 148 ~~~---~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 224 (241)
+.+ .++|+|||++++||+.|...||.+... ..--.+....+....+|+..+..+..|+.-|++.||.+||.++.+
T Consensus 362 ped~n~raadmwsfaillwel~trevpfadlsp--mecgmkialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmi 439 (448)
T KOG0195|consen 362 PEDLNIRAADMWSFAILLWELNTREVPFADLSP--MECGMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMI 439 (448)
T ss_pred chhcchhhhhHHHHHHHHHHhhccccccccCCc--hhhhhhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCccee
Confidence 543 578999999999999999999977532 222234455578888999999999999999999999999998876
Q ss_pred h
Q 042809 225 L 225 (241)
Q Consensus 225 l 225 (241)
+
T Consensus 440 v 440 (448)
T KOG0195|consen 440 V 440 (448)
T ss_pred h
Confidence 5
No 419
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.80 E-value=2.4e-19 Score=144.56 Aligned_cols=193 Identities=26% Similarity=0.384 Sum_probs=137.2
Q ss_pred HhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHHH------HHhhcCCc-cccCCCCCcE
Q 042809 30 RQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTK------EILHGNGI-LHCDLKCNNV 97 (241)
Q Consensus 30 l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~------~~Lh~~~~-vH~dl~p~Ni 97 (241)
|+.+.|.|+.+ .++...++|.+||..|+|.+.+......++.-....+.+ ++||.-.+ .|+.+++.|+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC 80 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC 80 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence 46788999987 566899999999999999999998655555555544444 45786554 9999999999
Q ss_pred EeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccC-------CCchhhHHHHHHHHHHHHhCCC
Q 042809 98 LLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEG-------LDFATDIWSLGCMVIEMATGRP 170 (241)
Q Consensus 98 l~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-------~~~~~Di~slG~~l~~l~~g~~ 170 (241)
+++..+.+|++|||+...... ...............|.|||.+.+.. .+.++|+||+|++++|+++...
T Consensus 81 lvd~~w~lklt~~Gl~~~~~~----~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~ 156 (484)
T KOG1023|consen 81 LVDSRWVLKLTDFGLNSLLEE----TAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSG 156 (484)
T ss_pred eeeeeEEEEechhhhcccccc----cccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccC
Confidence 999999999999999876543 00011111122356699999997632 3567899999999999999999
Q ss_pred CCccchhchH-HHHHHHHhc-CC---CCCCC-h-hhHHHHHHHHHHhhccCCCCCCChHHHhc
Q 042809 171 PWGDKISNAA-ATLLKIACS-NE---KPHFP-T-QFFKKVLDFLAKCLERKPEKRWSAEELLN 226 (241)
Q Consensus 171 p~~~~~~~~~-~~~~~~~~~-~~---~~~~~-~-~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 226 (241)
||........ .++...... .. .|... . ..++++..++.+||..+|.+||+++++-.
T Consensus 157 ~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 157 PFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred ccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence 9966322111 222222222 22 22222 1 34457999999999999999999998743
No 420
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.80 E-value=7.5e-20 Score=135.01 Aligned_cols=138 Identities=18% Similarity=0.254 Sum_probs=97.7
Q ss_pred CCcEEEEEeccch-----HHHHH------HHHHHHHHhhcCCCcccc-----c--------CCceeeeeecccCCCCHHH
Q 042809 5 TGALFVVKSAESE-----AGVQA------LRNEAEIRQSLNSPNIGR-----N--------GEKTVNIFMEYMAGGSLLD 60 (241)
Q Consensus 5 ~~~~vaiK~~~~~-----~~~~~------~~~e~~~l~~l~h~~i~~-----~--------~~~~~~lv~e~~~~~~L~~ 60 (241)
++..+|+|.+..+ ..... +.+|+..+.++.|++|.. . ..+..++||||++|.+|.+
T Consensus 53 ~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~ 132 (232)
T PRK10359 53 DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELND 132 (232)
T ss_pred CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHH
Confidence 4667999998732 22223 579999999999999866 1 1246899999999999988
Q ss_pred HHHHhCCCCCHHHHHHH--HHHHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccc
Q 042809 61 VAEKFGGTLDAGVIRLY--TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLW 138 (241)
Q Consensus 61 ~l~~~~~~~~~~~~~~~--~~~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (241)
+.. ++......+ +...+|+.|++|||++|+||+++.+| ++|+|||......+.. .
T Consensus 133 ~~~-----~~~~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~-------a---------- 189 (232)
T PRK10359 133 MPE-----ISEDVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRK-------A---------- 189 (232)
T ss_pred hhh-----ccHHHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEECCCcccccchh-------h----------
Confidence 743 223322222 33458999999999999999999988 9999999886543210 0
Q ss_pred cCcccccccCCCchhhHHHHHHHHHHHH
Q 042809 139 MAPEVLRNEGLDFATDIWSLGCMVIEMA 166 (241)
Q Consensus 139 ~aPE~~~~~~~~~~~Di~slG~~l~~l~ 166 (241)
...+.....+..++|+|+||+++..+.
T Consensus 190 -~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 190 -KDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred -HHHHHHHhHhcccccccceeEeehHHH
Confidence 011333444567899999999986553
No 421
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.77 E-value=1.9e-18 Score=125.11 Aligned_cols=168 Identities=20% Similarity=0.143 Sum_probs=107.8
Q ss_pred CCcEEEEEeccchH------HHHHHHHHHHHHhhcCC-Ccccc-cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHH
Q 042809 5 TGALFVVKSAESEA------GVQALRNEAEIRQSLNS-PNIGR-NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRL 76 (241)
Q Consensus 5 ~~~~vaiK~~~~~~------~~~~~~~e~~~l~~l~h-~~i~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 76 (241)
.+..++.+.+.... ....+.+|+++|++|.| +++.. ..-+..+++|||+.|.+|...+.. ..........
T Consensus 24 ~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~~~~lvmeyI~G~~L~~~~~~--~~~~~~~qi~ 101 (218)
T PRK12274 24 GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWDGRHLDRSYLAGAAMYQRPPR--GDLAYFRAAR 101 (218)
T ss_pred CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEcCEEEEEeeecCccHHhhhhh--hhHHHHHHHH
Confidence 34555555544221 12357899999999964 55555 223557999999999999765432 1122122223
Q ss_pred HHHHHhhcCCccccCC-CCCcEEeecCCCeeecCCCcchhhcccccC------Cccccc-cccccCcccccCcccccc-c
Q 042809 77 YTKEILHGNGILHCDL-KCNNVLLGSHGDVKLPDLGCARRVNDLKNN------GNLKQS-WQSIGGTQLWMAPEVLRN-E 147 (241)
Q Consensus 77 ~~~~~Lh~~~~vH~dl-~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~-~~~~~~~~~~~aPE~~~~-~ 147 (241)
-+.+.+|++|++|||| +|.||+++.+|.++|+|||++......... ...... ......++.+++|+...- .
T Consensus 102 ~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~ 181 (218)
T PRK12274 102 RLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLK 181 (218)
T ss_pred HHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhc
Confidence 3445689999999999 799999999999999999999754331110 000000 001224556666665432 1
Q ss_pred CCC-chhhHHHHHHHHHHHHhCCCCCcc
Q 042809 148 GLD-FATDIWSLGCMVIEMATGRPPWGD 174 (241)
Q Consensus 148 ~~~-~~~Di~slG~~l~~l~~g~~p~~~ 174 (241)
..+ .+.+.++.|.-+|.++|+..++..
T Consensus 182 ~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 182 RTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred cchhHHHHHHHhcchHHHHHhccCCccc
Confidence 233 567888999999999998888654
No 422
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.75 E-value=1.9e-18 Score=125.88 Aligned_cols=110 Identities=18% Similarity=0.146 Sum_probs=80.4
Q ss_pred CCcEEEEEeccchHH----------------------------HHHHHHHHHHHhhcCCCcccc---cCCceeeeeeccc
Q 042809 5 TGALFVVKSAESEAG----------------------------VQALRNEAEIRQSLNSPNIGR---NGEKTVNIFMEYM 53 (241)
Q Consensus 5 ~~~~vaiK~~~~~~~----------------------------~~~~~~e~~~l~~l~h~~i~~---~~~~~~~lv~e~~ 53 (241)
+|+.||+|+++.... .....+|++.+.++.++++.. ......++||||+
T Consensus 20 ~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~~p~~~~~~~~~iVmE~i 99 (190)
T cd05147 20 NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIPCPEPILLKSHVLVMEFI 99 (190)
T ss_pred CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCcEEEecCCEEEEEEe
Confidence 799999999864310 012235999999998776633 1112338999999
Q ss_pred CCCCHHHHHHHhCCCCCHHHHHHHHHH------Hh-hcCCccccCCCCCcEEeecCCCeeecCCCcchhh
Q 042809 54 AGGSLLDVAEKFGGTLDAGVIRLYTKE------IL-HGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRV 116 (241)
Q Consensus 54 ~~~~L~~~l~~~~~~~~~~~~~~~~~~------~L-h~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~ 116 (241)
+|++|...... ...++...+..++.| .+ |+.|++||||||+||+++ ++.++|+|||++...
T Consensus 100 ~g~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 100 GDDGWAAPRLK-DAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred CCCCCcchhhh-cCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEEEEEccccccC
Confidence 98777655433 356777776666654 36 799999999999999998 588999999999754
No 423
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.72 E-value=2.9e-17 Score=120.05 Aligned_cols=109 Identities=17% Similarity=0.153 Sum_probs=80.0
Q ss_pred CCcEEEEEeccchHH----------------------------HHHHHHHHHHHhhcCCCcccc---cCCceeeeeeccc
Q 042809 5 TGALFVVKSAESEAG----------------------------VQALRNEAEIRQSLNSPNIGR---NGEKTVNIFMEYM 53 (241)
Q Consensus 5 ~~~~vaiK~~~~~~~----------------------------~~~~~~e~~~l~~l~h~~i~~---~~~~~~~lv~e~~ 53 (241)
+|+.||||+++.... ...+.+|...+.++.|+++.. ......++||||+
T Consensus 20 ~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~lVmE~~ 99 (190)
T cd05145 20 DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVPVPEPILLKKNVLVMEFI 99 (190)
T ss_pred CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCCCceEEEecCCEEEEEEe
Confidence 799999999774210 122467899999999988743 1112348999999
Q ss_pred CCCCHHHH-HHHhCCCCCHHHHHHHHHHH------hhc-CCccccCCCCCcEEeecCCCeeecCCCcchhh
Q 042809 54 AGGSLLDV-AEKFGGTLDAGVIRLYTKEI------LHG-NGILHCDLKCNNVLLGSHGDVKLPDLGCARRV 116 (241)
Q Consensus 54 ~~~~L~~~-l~~~~~~~~~~~~~~~~~~~------Lh~-~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~ 116 (241)
+|+++... +.. ..++......++.++ +|+ .|++||||||+||+++ ++.++|+|||++...
T Consensus 100 ~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~liDFG~a~~~ 167 (190)
T cd05145 100 GDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVEL 167 (190)
T ss_pred cCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEEEEEcccceec
Confidence 88755443 433 455555555555544 688 9999999999999998 899999999999654
No 424
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.65 E-value=2.8e-17 Score=138.17 Aligned_cols=210 Identities=25% Similarity=0.360 Sum_probs=156.7
Q ss_pred HHHHHHHHHHHhhcC-CCcccc-----cCCceeeeeecccCCCCHHHHH-HHhCCCCCHHHHHHHHHHH------hh-cC
Q 042809 20 VQALRNEAEIRQSLN-SPNIGR-----NGEKTVNIFMEYMAGGSLLDVA-EKFGGTLDAGVIRLYTKEI------LH-GN 85 (241)
Q Consensus 20 ~~~~~~e~~~l~~l~-h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l-~~~~~~~~~~~~~~~~~~~------Lh-~~ 85 (241)
......|..+=+.+. |+|++. ......+++++|..|+++++.+ .......+...+..++.|+ +| ..
T Consensus 64 ~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~ 143 (601)
T KOG0590|consen 64 SEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN 143 (601)
T ss_pred hhhcCccccccccccccccccccCCccCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccc
Confidence 444556777777777 999987 6777899999999999999988 4432244445555555554 79 99
Q ss_pred CccccCCCCCcEEeecCC-CeeecCCCcchhhcccccCCccccccccccC-cccccCcccccccC-CCchhhHHHHHHHH
Q 042809 86 GILHCDLKCNNVLLGSHG-DVKLPDLGCARRVNDLKNNGNLKQSWQSIGG-TQLWMAPEVLRNEG-LDFATDIWSLGCMV 162 (241)
Q Consensus 86 ~~vH~dl~p~Nil~~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~aPE~~~~~~-~~~~~Di~slG~~l 162 (241)
++.|+|++|+|.+++..+ ..++.|||++...... ..........+| ++.|.|||...+.. ..+..|+||.|+++
T Consensus 144 ~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~---~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l 220 (601)
T KOG0590|consen 144 GVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK---NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVL 220 (601)
T ss_pred ccccCCCCCccchhccCCCcccCCCchhhcccccc---CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccc
Confidence 999999999999999999 9999999999876552 122233344556 99999999998853 46788999999999
Q ss_pred HHHHhCCCCCccchhchHHHHHHHHhc-CCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCC
Q 042809 163 IEMATGRPPWGDKISNAAATLLKIACS-NEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISG 232 (241)
Q Consensus 163 ~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~ 232 (241)
..+++|..||................. ...............+++.+++..+|..|.+++++..+||+..
T Consensus 221 ~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 221 SAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred cccccCCCCccccccccccceeecccccccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 999999999866433332111111111 1122334456678889999999999999999999999999987
No 425
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.64 E-value=5.4e-16 Score=133.82 Aligned_cols=159 Identities=21% Similarity=0.319 Sum_probs=123.0
Q ss_pred CCcEEEEEeccchHHHHHHHHHHHHHhhcCCCcccc---------cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHH
Q 042809 5 TGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR---------NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIR 75 (241)
Q Consensus 5 ~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~---------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 75 (241)
+|+.||+|+-.-.. .-+|.-..+++.+|+ +-+.. ...+.-++|+||.+.|+|-+++.. ....++....
T Consensus 721 ~~~~~alK~e~P~~-~WEfYI~~q~~~RLk-~~~~~~~~~~~~a~~~~~~S~lv~ey~~~Gtlld~~N~-~~~m~e~lv~ 797 (974)
T KOG1166|consen 721 NGKLVALKVEKPPN-PWEFYICLQVMERLK-PQMLPSIMHISSAHVFQNASVLVSEYSPYGTLLDLINT-NKVMDEYLVM 797 (974)
T ss_pred CCcEEEEEeecCCC-ceeeeehHHHHHhhc-hhhhcchHHHHHHHccCCcceeeeeccccccHHHhhcc-CCCCCchhhh
Confidence 38999999866333 344555556666666 32222 666778899999999999999995 5667777777
Q ss_pred HHHHHH------hhcCCccccCCCCCcEEeec-------CCCeeecCCCcchhhcccccCCccccccccccCcccccCcc
Q 042809 76 LYTKEI------LHGNGILHCDLKCNNVLLGS-------HGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPE 142 (241)
Q Consensus 76 ~~~~~~------Lh~~~~vH~dl~p~Nil~~~-------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE 142 (241)
++..|+ ||..+||||||||+|+++.. ...++|+|||.+.-..-.... ..+....+|..+--+|
T Consensus 798 ~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~----~~F~~~~~td~f~C~E 873 (974)
T KOG1166|consen 798 FFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDG----TKFKAVWHTDLFDCIE 873 (974)
T ss_pred HHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCC----cEEeeeeccccchhHH
Confidence 777666 69999999999999999943 234899999999755443332 3455667788899999
Q ss_pred cccccCCCchhhHHHHHHHHHHHHhCCC
Q 042809 143 VLRNEGLDFATDIWSLGCMVIEMATGRP 170 (241)
Q Consensus 143 ~~~~~~~~~~~Di~slG~~l~~l~~g~~ 170 (241)
...|.+|++.+|.|+++.+++-|+.|+.
T Consensus 874 M~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 874 MREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred HhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999764
No 426
>PRK10345 hypothetical protein; Provisional
Probab=99.63 E-value=2.8e-15 Score=110.37 Aligned_cols=109 Identities=19% Similarity=0.175 Sum_probs=77.2
Q ss_pred CCCCCcEEEEEeccch--HHHHHHHHHHHHHhhc-----CCCcccc-----cCC---ceee-eeecc--cCCCCHHHHHH
Q 042809 2 NKGTGALFVVKSAESE--AGVQALRNEAEIRQSL-----NSPNIGR-----NGE---KTVN-IFMEY--MAGGSLLDVAE 63 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l-----~h~~i~~-----~~~---~~~~-lv~e~--~~~~~L~~~l~ 63 (241)
++.++.. +||+.... ...+.+.+|+.+++.+ .||||++ +++ +.++ +|+|| +.+++|.+++.
T Consensus 21 hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~ 99 (210)
T PRK10345 21 HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAE 99 (210)
T ss_pred CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHH
Confidence 3455555 68886632 2356799999999999 5799988 222 3433 78999 44789999997
Q ss_pred HhCCCCCHHH--H---HHHHHHHhhcCCccccCCCCCcEEeecC----CCeeecCCCcc
Q 042809 64 KFGGTLDAGV--I---RLYTKEILHGNGILHCDLKCNNVLLGSH----GDVKLPDLGCA 113 (241)
Q Consensus 64 ~~~~~~~~~~--~---~~~~~~~Lh~~~~vH~dl~p~Nil~~~~----~~~kl~dfg~~ 113 (241)
.. .+++.. . ..-+.++||+++++||||||+||+++.. +.++|+||+.+
T Consensus 100 ~~--~~~e~~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 100 QC--RYEEDVAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred cc--cccHhHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 62 344432 1 1122367899999999999999999743 37999995444
No 427
>smart00090 RIO RIO-like kinase.
Probab=99.59 E-value=2.8e-15 Score=112.85 Aligned_cols=113 Identities=19% Similarity=0.167 Sum_probs=79.9
Q ss_pred CCCCCcEEEEEeccchH--------------------------HHHHHHHHHHHHhhcCCCccc--c-cCCceeeeeecc
Q 042809 2 NKGTGALFVVKSAESEA--------------------------GVQALRNEAEIRQSLNSPNIG--R-NGEKTVNIFMEY 52 (241)
Q Consensus 2 ~~~~~~~vaiK~~~~~~--------------------------~~~~~~~e~~~l~~l~h~~i~--~-~~~~~~~lv~e~ 52 (241)
+..+|+.||+|.++... ....+.+|+..+.++.+.++. . ......++||||
T Consensus 50 ~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~i~~p~~~~~~~~~lV~E~ 129 (237)
T smart00090 50 FDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAGVPVPKPIAWRRNVLVMEF 129 (237)
T ss_pred cCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeEecCceEEEEE
Confidence 45789999999876321 112356899999999764432 1 122345899999
Q ss_pred cCCCCHHHHHHHhCCCCCHHHHHHHHHH------HhhcCC-ccccCCCCCcEEeecCCCeeecCCCcchhh
Q 042809 53 MAGGSLLDVAEKFGGTLDAGVIRLYTKE------ILHGNG-ILHCDLKCNNVLLGSHGDVKLPDLGCARRV 116 (241)
Q Consensus 53 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~------~Lh~~~-~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~ 116 (241)
++|++|...... ...........++.| .||+.| ++|+||||+||+++ ++.++|+|||.+...
T Consensus 130 ~~g~~L~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 130 IGGDGLPAPRLK-DVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred ecCCcccccccc-cCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence 998888766533 233444333344443 379999 99999999999998 889999999998643
No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.58 E-value=1.1e-14 Score=107.25 Aligned_cols=108 Identities=25% Similarity=0.298 Sum_probs=80.5
Q ss_pred CCcEEEEEeccch----------HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCC
Q 042809 5 TGALFVVKSAESE----------AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69 (241)
Q Consensus 5 ~~~~vaiK~~~~~----------~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~ 69 (241)
+|..+++|..... ....++.+|++++..+.|+++.. ......++||||++|++|.+++.....
T Consensus 16 ~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~~~-- 93 (199)
T TIGR03724 16 LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEGND-- 93 (199)
T ss_pred CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCccHHHHHhhcHH--
Confidence 5678899974321 12356789999999998877533 455567899999999999998875321
Q ss_pred CHHHHHHHHHHHhhcCCccccCCCCCcEEeecCCCeeecCCCcchh
Q 042809 70 DAGVIRLYTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115 (241)
Q Consensus 70 ~~~~~~~~~~~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~ 115 (241)
........+...||+.|++|+|++|.||+++ ++.++++|||.+..
T Consensus 94 ~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 94 ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 1222222333558999999999999999998 89999999998864
No 429
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.55 E-value=3.4e-14 Score=107.24 Aligned_cols=108 Identities=19% Similarity=0.306 Sum_probs=80.0
Q ss_pred CcEEEEEeccch---------------HHHHHHHHHHHHHhhcCCCccc--c------cCCc---eeeeeecccCC-CCH
Q 042809 6 GALFVVKSAESE---------------AGVQALRNEAEIRQSLNSPNIG--R------NGEK---TVNIFMEYMAG-GSL 58 (241)
Q Consensus 6 ~~~vaiK~~~~~---------------~~~~~~~~e~~~l~~l~h~~i~--~------~~~~---~~~lv~e~~~~-~~L 58 (241)
+..+|+|.+... .....+.+|+.++..|.|+++. . .... ..++|+|+++| .+|
T Consensus 55 ~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L 134 (239)
T PRK01723 55 GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDL 134 (239)
T ss_pred CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCH
Confidence 567788876421 1234578899999999988862 1 1112 23599999997 699
Q ss_pred HHHHHHhCCCCCHHHHHHHHH--HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchh
Q 042809 59 LDVAEKFGGTLDAGVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115 (241)
Q Consensus 59 ~~~l~~~~~~~~~~~~~~~~~--~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~ 115 (241)
.+++.. ..++......++. ..||+.|++|+||||.||+++.++.++|+|||.+..
T Consensus 135 ~~~l~~--~~l~~~~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 135 VALLQE--APLSEEQWQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred HHHHhc--CCCCHHHHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence 998875 3455555444444 348999999999999999999999999999998853
No 430
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.54 E-value=4.5e-14 Score=105.07 Aligned_cols=109 Identities=28% Similarity=0.339 Sum_probs=80.1
Q ss_pred CCcEEEEEeccch----------HHHHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCC
Q 042809 5 TGALFVVKSAESE----------AGVQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTL 69 (241)
Q Consensus 5 ~~~~vaiK~~~~~----------~~~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~ 69 (241)
+|..+++|..... .....+.+|+.++..+.|+++.. ......++||||++|++|.+++..... .
T Consensus 18 ~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~~~~-~ 96 (211)
T PRK14879 18 LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINSNGM-E 96 (211)
T ss_pred CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHhccH-H
Confidence 5677888874421 12345788999999999888754 356678999999999999999876321 0
Q ss_pred CHHHHHH--HHHHHhhcCCccccCCCCCcEEeecCCCeeecCCCcchh
Q 042809 70 DAGVIRL--YTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115 (241)
Q Consensus 70 ~~~~~~~--~~~~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~ 115 (241)
....+.. .+...+|+.|++|+|++|.||+++ ++.++++|||.+..
T Consensus 97 ~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 97 ELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 0111111 122448999999999999999998 88999999998854
No 431
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.53 E-value=2.1e-14 Score=105.71 Aligned_cols=110 Identities=18% Similarity=0.143 Sum_probs=78.2
Q ss_pred CCCcEEEEEeccchH------------------------HHHHHHHHHHHHhhcCCCcc--cc-cCCceeeeeecccCCC
Q 042809 4 GTGALFVVKSAESEA------------------------GVQALRNEAEIRQSLNSPNI--GR-NGEKTVNIFMEYMAGG 56 (241)
Q Consensus 4 ~~~~~vaiK~~~~~~------------------------~~~~~~~e~~~l~~l~h~~i--~~-~~~~~~~lv~e~~~~~ 56 (241)
.+|+.||||+++.+. ....+..|..++..+.++++ .. ......++||||++|+
T Consensus 37 ~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~~~~~~~~~lv~e~~~g~ 116 (198)
T cd05144 37 PDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVPKPIDWNRHAVVMEYIDGV 116 (198)
T ss_pred CCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCCceeecCCceEEEEEeCCc
Confidence 479999999855221 11235678888988887753 22 2344568999999999
Q ss_pred CHHHHHHHhCCCCCHHHHHHHHH--HHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhh
Q 042809 57 SLLDVAEKFGGTLDAGVIRLYTK--EILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRV 116 (241)
Q Consensus 57 ~L~~~l~~~~~~~~~~~~~~~~~--~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~ 116 (241)
+|...... ......+..++. ..+|+.|++|+||+|.||+++.++.++|+|||++...
T Consensus 117 ~L~~~~~~---~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 117 ELYRVRVL---EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYIIDWPQMVST 175 (198)
T ss_pred chhhcccc---ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEEEECCccccC
Confidence 99776431 112222233333 3379999999999999999999999999999999644
No 432
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.45 E-value=6.6e-13 Score=93.32 Aligned_cols=91 Identities=27% Similarity=0.376 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHhhcC-----CCcccccCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHHHHH--hhcCCccccCC
Q 042809 20 VQALRNEAEIRQSLN-----SPNIGRNGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI--LHGNGILHCDL 92 (241)
Q Consensus 20 ~~~~~~e~~~l~~l~-----h~~i~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~--Lh~~~~vH~dl 92 (241)
..+..+|++++.+++ .|-+...+.+...++|||++|..|.+++.+. .......+..++ ||..|++||||
T Consensus 43 r~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~----~~~~~r~vG~~vg~lH~~givHGDL 118 (204)
T COG3642 43 RERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA----RPDLLREVGRLVGKLHKAGIVHGDL 118 (204)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc----chHHHHHHHHHHHHHHhcCeecCCC
Confidence 455678999998886 3444447888889999999999999999873 344455555544 99999999999
Q ss_pred CCCcEEeecCCCeeecCCCcchh
Q 042809 93 KCNNVLLGSHGDVKLPDLGCARR 115 (241)
Q Consensus 93 ~p~Nil~~~~~~~kl~dfg~~~~ 115 (241)
+++||+++.++ +.++|||++..
T Consensus 119 TtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 119 TTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred ccceEEEeCCc-EEEEECCcccc
Confidence 99999996544 99999999964
No 433
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.44 E-value=1.5e-13 Score=115.77 Aligned_cols=92 Identities=25% Similarity=0.299 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHHHHHhhcCCccccCCCC
Q 042809 20 VQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGILHCDLKC 94 (241)
Q Consensus 20 ~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~Lh~~~~vH~dl~p 94 (241)
.+.+.+|++++..++|+++.. ......++||||++|++|.+++... ........-....||+.|++||||||
T Consensus 380 ~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~~~---~~~~~~i~~~L~~lH~~giiHrDlkp 456 (535)
T PRK09605 380 TERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLEGN---PELVRKVGEIVAKLHKAGIVHGDLTT 456 (535)
T ss_pred HHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHHHH---HHHHHHHHHHHHHHHhCCCccCCCCh
Confidence 356889999999999999865 3455678999999999999988631 11112222233568999999999999
Q ss_pred CcEEeecCCCeeecCCCcchh
Q 042809 95 NNVLLGSHGDVKLPDLGCARR 115 (241)
Q Consensus 95 ~Nil~~~~~~~kl~dfg~~~~ 115 (241)
+||++ .++.++|+|||++..
T Consensus 457 ~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 457 SNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred HHEEE-ECCcEEEEeCccccc
Confidence 99999 678999999999864
No 434
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.41 E-value=1e-12 Score=99.71 Aligned_cols=194 Identities=21% Similarity=0.253 Sum_probs=126.7
Q ss_pred HhhcCCCcccc----------cCCceeeeeecccCCCCHHHHHHHh---CCCCCHHHHHHHHHHH------hhcC--Ccc
Q 042809 30 RQSLNSPNIGR----------NGEKTVNIFMEYMAGGSLLDVAEKF---GGTLDAGVIRLYTKEI------LHGN--GIL 88 (241)
Q Consensus 30 l~~l~h~~i~~----------~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~~------Lh~~--~~v 88 (241)
+.++.|.|+++ .+.....+++|||..|+|..+|++. +..+.......++-|+ ||+. .++
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppii 200 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPII 200 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccc
Confidence 44556777776 3566788999999999999999874 3445555556666665 6764 499
Q ss_pred ccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCchhhHHHHHHHHHHHHhC
Q 042809 89 HCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATG 168 (241)
Q Consensus 89 H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g 168 (241)
|++++.+.|++..+|-+|++.-.....-... ............+-++|.+||.=.....+.++|||+||+...++..+
T Consensus 201 hgnlTc~tifiq~ngLIkig~~ap~s~h~s~--~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 201 HGNLTCDTIFIQHNGLIKIGSVAPDSTHPSV--NSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred cCCcchhheeecCCceEEecccCccccchhh--hhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence 9999999999998888887542211110000 01111111223356778888887666677889999999999999887
Q ss_pred CCCCccchhchHH-HHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCC
Q 042809 169 RPPWGDKISNAAA-TLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISG 232 (241)
Q Consensus 169 ~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~ 232 (241)
..-..+....... ........+... ..-+.++.+|++-+|..||++.+++.||.+-+
T Consensus 279 Eiq~tnseS~~~~ee~ia~~i~~len-------~lqr~~i~kcl~~eP~~rp~ar~llfHpllfe 336 (458)
T KOG1266|consen 279 EIQSTNSESKVEVEENIANVIIGLEN-------GLQRGSITKCLEGEPNGRPDARLLLFHPLLFE 336 (458)
T ss_pred eeccCCCcceeehhhhhhhheeeccC-------ccccCcCcccccCCCCCCcchhhhhcCceeee
Confidence 7654332221111 111111111111 12346889999999999999999999996543
No 435
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.41 E-value=3.9e-13 Score=109.22 Aligned_cols=223 Identities=22% Similarity=0.237 Sum_probs=157.1
Q ss_pred CCCCcEEEEEeccc----hHHHHHHHHHHHHHhhcC-CCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHH
Q 042809 3 KGTGALFVVKSAES----EAGVQALRNEAEIRQSLN-SPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAG 72 (241)
Q Consensus 3 ~~~~~~vaiK~~~~----~~~~~~~~~e~~~l~~l~-h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 72 (241)
..++..+|+|.-.. +.....=.+|+...+++. |++.++ ...+..++=+|+|. .+|.++-......++..
T Consensus 140 ~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqtE~~~-~sl~~~~~~~~~~~p~~ 218 (524)
T KOG0601|consen 140 SESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQTELCG-ESLQSYCHTPCNFLPDN 218 (524)
T ss_pred ccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceeeecccc-chhHHhhhcccccCCch
Confidence 34667778887331 222233456777777776 888887 77889999999995 78888877655545555
Q ss_pred HHHHHHHH----------HhhcCCccccCCCCCcEEeecC-CCeeecCCCcchhhcccccCCccccccccccCcccccCc
Q 042809 73 VIRLYTKE----------ILHGNGILHCDLKCNNVLLGSH-GDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAP 141 (241)
Q Consensus 73 ~~~~~~~~----------~Lh~~~~vH~dl~p~Nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aP 141 (241)
.++..+.+ .+|+.+++|-|++|.||+...+ ...+++|||++..+.+.......... ....|...|++|
T Consensus 219 ~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~-~r~~~~~~Y~~k 297 (524)
T KOG0601|consen 219 LLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVS-KRPEGDCIYAAK 297 (524)
T ss_pred hhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEEccCCccccceeee-ecCCCCceEeCh
Confidence 55544443 3699999999999999999999 77899999999988775444433332 223467779999
Q ss_pred ccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCCh
Q 042809 142 EVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSA 221 (241)
Q Consensus 142 E~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~ 221 (241)
|..++. ++..+|+|++|.++.+..++..+............ +. ...+.++....+..+...+..|+..+|..|++.
T Consensus 298 e~~~~l-~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~-r~--~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~ 373 (524)
T KOG0601|consen 298 ELLNGL-ATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQL-RQ--GYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTA 373 (524)
T ss_pred hhhccc-cchHhhhcchhhhhHhhHhhcccccCCCCCCcccc-cc--ccCchhhhcCcchhhhhHHHHhcCcchhhhhHH
Confidence 998765 57789999999999999887765533211111111 00 012233344445566679999999999999999
Q ss_pred HHHhcCCCCC
Q 042809 222 EELLNHTFIS 231 (241)
Q Consensus 222 ~~~l~~p~~~ 231 (241)
+.++.++++.
T Consensus 374 q~~~~l~~i~ 383 (524)
T KOG0601|consen 374 QILTALNVIH 383 (524)
T ss_pred HHHhcccccc
Confidence 9999999875
No 436
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.39 E-value=3.9e-12 Score=104.82 Aligned_cols=156 Identities=20% Similarity=0.319 Sum_probs=109.5
Q ss_pred CCCCcEEEEEeccchHH--HHHHHHHHHHHhhcCCCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHH-
Q 042809 3 KGTGALFVVKSAESEAG--VQALRNEAEIRQSLNSPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI- 74 (241)
Q Consensus 3 ~~~~~~vaiK~~~~~~~--~~~~~~e~~~l~~l~h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~- 74 (241)
+.++.+|.+..+..+.. .....+-++.|+.++||||++ +.++++|+|+|-+ ..|..+++..+ .+....-
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~l~-~~~v~~Gl 110 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKELG-KEEVCLGL 110 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHHhH-HHHHHHHH
Confidence 56788888888775544 566788889999999999998 6778999999999 48999998854 1111111
Q ss_pred HHH--HHHHhh-cCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCc
Q 042809 75 RLY--TKEILH-GNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDF 151 (241)
Q Consensus 75 ~~~--~~~~Lh-~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ 151 (241)
..+ ++-+|| ..+++|++|.-+.|+++..|..||++|.++........ ... ...-.-.|..|+.+.... -
T Consensus 111 ~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~----~~~--~~~~~~s~~~P~~~~~s~--~ 182 (690)
T KOG1243|consen 111 FQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA----PAK--SLYLIESFDDPEEIDPSE--W 182 (690)
T ss_pred HHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc----ccc--cchhhhcccChhhcCccc--c
Confidence 111 123365 78899999999999999999999999998865433211 000 001112245555443322 3
Q ss_pred hhhHHHHHHHHHHHHhCC
Q 042809 152 ATDIWSLGCMVIEMATGR 169 (241)
Q Consensus 152 ~~Di~slG~~l~~l~~g~ 169 (241)
..|.|.||+++++++.|.
T Consensus 183 s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 183 SIDSWGLGCLIEELFNGS 200 (690)
T ss_pred chhhhhHHHHHHHHhCcc
Confidence 469999999999999983
No 437
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.39 E-value=4.8e-13 Score=114.84 Aligned_cols=196 Identities=25% Similarity=0.345 Sum_probs=142.0
Q ss_pred CCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHH------HHHHHhhcCCccccCCCCCcEEeecCCCeeecCCCcchh
Q 042809 42 GEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRL------YTKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115 (241)
Q Consensus 42 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~------~~~~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~ 115 (241)
-....+||++|.++++|.+.+..-+ ..+.+..+. ...+.||+..+.|+|++|.|.+...+|..++.+|+....
T Consensus 875 ~rsP~~L~~~~~~~~~~~Skl~~~~-~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~ 953 (1205)
T KOG0606|consen 875 CRSPLPLVGHYLNGGDLPSKLHNSG-CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSK 953 (1205)
T ss_pred CCCCcchhhHHhccCCchhhhhcCC-CcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccc
Confidence 4567999999999999999988743 333333322 233668998899999999999999999999999984432
Q ss_pred hccccc---------------------CCccc----cccccccCcccccCcccccccCCCchhhHHHHHHHHHHHHhCCC
Q 042809 116 VNDLKN---------------------NGNLK----QSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRP 170 (241)
Q Consensus 116 ~~~~~~---------------------~~~~~----~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~ 170 (241)
.+.... ..... .......+++.|.+||...+......+|.|++|+++++.++|..
T Consensus 954 vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~p 1033 (1205)
T KOG0606|consen 954 VGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIP 1033 (1205)
T ss_pred cccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCC
Confidence 211100 00000 11234568899999999999999999999999999999999999
Q ss_pred CCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChH---HHhcCCCCCCCCccCCC
Q 042809 171 PWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAE---ELLNHTFISGNAKKNST 239 (241)
Q Consensus 171 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~---~~l~~p~~~~~~~~~~~ 239 (241)
||...........+.... ..-+.-+...+....+++...+..+|.+|..+. +.-.|+||+..+-++=+
T Consensus 1034 p~na~tpq~~f~ni~~~~-~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~~~l~ 1104 (1205)
T KOG0606|consen 1034 PFNAETPQQIFENILNRD-IPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVDWENLA 1104 (1205)
T ss_pred CCCCcchhhhhhccccCC-CCCCCCccccChhhhhhhhhhhccCchhccCcccccccccCCccCCCCccccc
Confidence 998765544332211111 111223345667899999999999999999888 89999999887665543
No 438
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.39 E-value=5.9e-12 Score=103.02 Aligned_cols=78 Identities=22% Similarity=0.330 Sum_probs=57.5
Q ss_pred cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHH-HHH---HHHHhhcCCccccCCCCCcEEeecCCCeeecCCCcchhh
Q 042809 41 NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVI-RLY---TKEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRV 116 (241)
Q Consensus 41 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~-~~~---~~~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~ 116 (241)
......++||||++|++|.++........+...+ ... +...+|..|++|+|++|.||+++.+|.++++|||++...
T Consensus 228 ~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 228 DRTSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRL 307 (437)
T ss_pred hhcCCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence 3445678999999999999887643222232222 222 223468999999999999999999999999999999765
Q ss_pred cc
Q 042809 117 ND 118 (241)
Q Consensus 117 ~~ 118 (241)
.+
T Consensus 308 ~~ 309 (437)
T TIGR01982 308 SE 309 (437)
T ss_pred CH
Confidence 43
No 439
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.35 E-value=2.9e-13 Score=111.69 Aligned_cols=157 Identities=17% Similarity=0.194 Sum_probs=113.7
Q ss_pred HHHhh-cCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCC---ccccccccccCcccccCcccccccCCCchhh
Q 042809 79 KEILH-GNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNG---NLKQSWQSIGGTQLWMAPEVLRNEGLDFATD 154 (241)
Q Consensus 79 ~~~Lh-~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~---~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~D 154 (241)
++++| +.++||++|.|++|+++.+|.+||+.|+.+........-. ..............|.|||++.+...++++|
T Consensus 112 l~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~~~~~sd 191 (700)
T KOG2137|consen 112 LAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTTNTPASD 191 (700)
T ss_pred hhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcccccccccc
Confidence 35677 5789999999999999999999999999987654421100 0011111222356699999999988889999
Q ss_pred HHHHHHHHHHHHh-CCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCC
Q 042809 155 IWSLGCMVIEMAT-GRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233 (241)
Q Consensus 155 i~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~ 233 (241)
+||+|+++|.+.. |+.-+......................+...++.++++=+.+++..++.-||++..+...|||.+.
T Consensus 192 ~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~ 271 (700)
T KOG2137|consen 192 VFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLSIPFFSDP 271 (700)
T ss_pred ceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhhhcccccCCc
Confidence 9999999999994 555554432222222222222233334456788899999999999999999999999999999876
Q ss_pred Cc
Q 042809 234 AK 235 (241)
Q Consensus 234 ~~ 235 (241)
..
T Consensus 272 ~~ 273 (700)
T KOG2137|consen 272 GL 273 (700)
T ss_pred hh
Confidence 54
No 440
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.34 E-value=3.8e-12 Score=92.87 Aligned_cols=90 Identities=22% Similarity=0.202 Sum_probs=55.5
Q ss_pred HHHHHHhhcCCCcc-cc--cCCceeeeeecccCCC-----CHHHHHHHhCCCCCHHHHHHHHHHHhhc-CCccccCCCCC
Q 042809 25 NEAEIRQSLNSPNI-GR--NGEKTVNIFMEYMAGG-----SLLDVAEKFGGTLDAGVIRLYTKEILHG-NGILHCDLKCN 95 (241)
Q Consensus 25 ~e~~~l~~l~h~~i-~~--~~~~~~~lv~e~~~~~-----~L~~~l~~~~~~~~~~~~~~~~~~~Lh~-~~~vH~dl~p~ 95 (241)
.|...+..+.+..+ +. ......++||||++++ .|.+.... ............+...+|. .|++|+||+|+
T Consensus 66 ~e~~~l~~l~~~~~~~~~~~~~~~~~lv~e~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~ 144 (187)
T cd05119 66 KEFRNLKRLYEAGVPVPKPIDLNRHVLVMEFIGGDGIPAPRLKDVRLL-EDPEELYDQILELMRKLYREAGLVHGDLSEY 144 (187)
T ss_pred HHHHHHHHHHHcCCCCCceEecCCCEEEEEEeCCCCccChhhhhhhhc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChh
Confidence 45555555554332 11 2224568999999984 33333221 0000111111122244798 99999999999
Q ss_pred cEEeecCCCeeecCCCcchhh
Q 042809 96 NVLLGSHGDVKLPDLGCARRV 116 (241)
Q Consensus 96 Nil~~~~~~~kl~dfg~~~~~ 116 (241)
||+++ ++.++++|||.+...
T Consensus 145 Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 145 NILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred hEEEE-CCcEEEEECcccccc
Confidence 99999 899999999998643
No 441
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.28 E-value=2.4e-11 Score=85.35 Aligned_cols=113 Identities=24% Similarity=0.297 Sum_probs=79.2
Q ss_pred CCCcEEEEEe-----ccc-----hHHHHHHHHHHHHHhhcC-----CCcccccCCceeeeeecccCC-CCHHHHHHHhCC
Q 042809 4 GTGALFVVKS-----AES-----EAGVQALRNEAEIRQSLN-----SPNIGRNGEKTVNIFMEYMAG-GSLLDVAEKFGG 67 (241)
Q Consensus 4 ~~~~~vaiK~-----~~~-----~~~~~~~~~e~~~l~~l~-----h~~i~~~~~~~~~lv~e~~~~-~~L~~~l~~~~~ 67 (241)
-.|+.++||. ++- .-...+..+|++++.+++ .|-++..+...-+++|||++| .++.+++.+...
T Consensus 28 ~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~ 107 (229)
T KOG3087|consen 28 FSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTME 107 (229)
T ss_pred cCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHcc
Confidence 3577778885 221 223456789999998886 444444677778899999976 588999887633
Q ss_pred CCCHHH-----HHHHHHHH--hhcCCccccCCCCCcEEeecCCC---eeecCCCcchhh
Q 042809 68 TLDAGV-----IRLYTKEI--LHGNGILHCDLKCNNVLLGSHGD---VKLPDLGCARRV 116 (241)
Q Consensus 68 ~~~~~~-----~~~~~~~~--Lh~~~~vH~dl~p~Nil~~~~~~---~kl~dfg~~~~~ 116 (241)
...... ++.+..++ ||..+++||||+.+||++.+++. +.++|||++...
T Consensus 108 ~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 108 DESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred CcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence 322222 22333333 89999999999999999977654 589999998643
No 442
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.28 E-value=9.4e-12 Score=89.30 Aligned_cols=104 Identities=25% Similarity=0.271 Sum_probs=73.1
Q ss_pred CCcEEEEEeccchH-HHHHHHHHHHHHhhcCCCcccc----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHH-
Q 042809 5 TGALFVVKSAESEA-GVQALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYT- 78 (241)
Q Consensus 5 ~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~- 78 (241)
.|+.|++|...... ....+.+|+..+..+.+.++++ ......++||||++|.++.+. . .........++
T Consensus 20 ~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G~~l~~~--~---~~~~~~~~~l~~ 94 (170)
T cd05151 20 ANKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDPETGVLITEFIEGSELLTE--D---FSDPENLEKIAK 94 (170)
T ss_pred CCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeEEEEecCCCccccc--c---ccCHHHHHHHHH
Confidence 36789999976543 2345688999999887655544 333346899999999888653 1 11222222222
Q ss_pred -HHHhhcCCc-----cccCCCCCcEEeecCCCeeecCCCcch
Q 042809 79 -KEILHGNGI-----LHCDLKCNNVLLGSHGDVKLPDLGCAR 114 (241)
Q Consensus 79 -~~~Lh~~~~-----vH~dl~p~Nil~~~~~~~kl~dfg~~~ 114 (241)
...||+.++ +|||++|.||+++ ++.++++||+.+.
T Consensus 95 ~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 95 LLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred HHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 344898875 9999999999998 7789999999874
No 443
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.28 E-value=2.5e-11 Score=100.75 Aligned_cols=77 Identities=21% Similarity=0.321 Sum_probs=56.9
Q ss_pred cCCceeeeeecccCCCCHHHHH--HHhCC---CCCHHHHHHHHHHHhhcCCccccCCCCCcEEeecCC----CeeecCCC
Q 042809 41 NGEKTVNIFMEYMAGGSLLDVA--EKFGG---TLDAGVIRLYTKEILHGNGILHCDLKCNNVLLGSHG----DVKLPDLG 111 (241)
Q Consensus 41 ~~~~~~~lv~e~~~~~~L~~~l--~~~~~---~~~~~~~~~~~~~~Lh~~~~vH~dl~p~Nil~~~~~----~~kl~dfg 111 (241)
+.....++||||++|+++.++- ...+. .+....+..++.|++ ..|++|+|++|.||+++.+| .++++|||
T Consensus 231 d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif-~~GffHaDpHPGNIlv~~~g~~~~~i~llDFG 309 (537)
T PRK04750 231 DYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF-RDGFFHADMHPGNIFVSYDPPENPRYIALDFG 309 (537)
T ss_pred ccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH-hCCeeeCCCChHHeEEecCCCCCCeEEEEecc
Confidence 4456678999999999998753 32211 233333444555554 68999999999999999988 89999999
Q ss_pred cchhhcc
Q 042809 112 CARRVND 118 (241)
Q Consensus 112 ~~~~~~~ 118 (241)
++....+
T Consensus 310 ivg~l~~ 316 (537)
T PRK04750 310 IVGSLNK 316 (537)
T ss_pred eEEECCH
Confidence 9976544
No 444
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.26 E-value=5.7e-12 Score=88.44 Aligned_cols=107 Identities=21% Similarity=0.182 Sum_probs=74.4
Q ss_pred CcEEEEEeccchHHHHHHHHHHHHHhhcCCC--cccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHH
Q 042809 6 GALFVVKSAESEAGVQALRNEAEIRQSLNSP--NIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYT 78 (241)
Q Consensus 6 ~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~--~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 78 (241)
+..+++|..........+.+|+.++..+++. ++.+ ...+..++++||+.++++..+ .. ...........-+
T Consensus 21 ~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~-~~-~~~~~~~~~~~~~ 98 (155)
T cd05120 21 DEDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDEV-SE-EEKEDIAEQLAEL 98 (155)
T ss_pred CCeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecccC-CH-HHHHHHHHHHHHH
Confidence 3678999887554356788999999999764 4433 444679999999998877644 00 0000011111112
Q ss_pred HHHhhc---CCccccCCCCCcEEeecCCCeeecCCCcch
Q 042809 79 KEILHG---NGILHCDLKCNNVLLGSHGDVKLPDLGCAR 114 (241)
Q Consensus 79 ~~~Lh~---~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~ 114 (241)
...||. .+++|+|++|.||+++..+.++++|||.+.
T Consensus 99 l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~ 137 (155)
T cd05120 99 LAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAG 137 (155)
T ss_pred HHHHhCCCceEEEecCCCcceEEEECCcEEEEEeccccc
Confidence 344676 479999999999999998999999999875
No 445
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.16 E-value=1.4e-10 Score=84.14 Aligned_cols=89 Identities=15% Similarity=0.183 Sum_probs=58.2
Q ss_pred HHHHHHhhcCCCccc-c--cCCceeeeeecccCCCCHHH-HHHHhCCCCCHHHHHHH----HH---HHhhcCCccccCCC
Q 042809 25 NEAEIRQSLNSPNIG-R--NGEKTVNIFMEYMAGGSLLD-VAEKFGGTLDAGVIRLY----TK---EILHGNGILHCDLK 93 (241)
Q Consensus 25 ~e~~~l~~l~h~~i~-~--~~~~~~~lv~e~~~~~~L~~-~l~~~~~~~~~~~~~~~----~~---~~Lh~~~~vH~dl~ 93 (241)
+|.+.|.++...++- + ..-..-++||||+.++.+.. .++. ..++......+ +. .++|..|++||||+
T Consensus 75 kE~r~L~rl~~~Gv~vP~pi~~~~~~lvME~Ig~~~~~~~~Lkd--~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs 152 (197)
T cd05146 75 KEMHNLKRMQKAGIPCPEVVVLKKHVLVMSFIGDDQVPAPKLKD--AKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLS 152 (197)
T ss_pred HHHHHHHHHHHcCCCCCeEEEecCCEEEEEEcCCCCccchhhhc--cccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 899999988644431 1 23356788999997643422 2322 22322222111 11 22399999999999
Q ss_pred CCcEEeecCCCeeecCCCcchhh
Q 042809 94 CNNVLLGSHGDVKLPDLGCARRV 116 (241)
Q Consensus 94 p~Nil~~~~~~~kl~dfg~~~~~ 116 (241)
+.||+++ ++.+.|+|||.+...
T Consensus 153 ~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 153 EYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred HHHEEEE-CCcEEEEECCCceeC
Confidence 9999996 578999999988644
No 446
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.15 E-value=1.5e-10 Score=83.70 Aligned_cols=95 Identities=22% Similarity=0.234 Sum_probs=58.3
Q ss_pred HHHHHHHHHHhhcCCCcc-cc--cCCceeeeeecccC--CCCHHHHHHHhCCCCCHHH-HHHH---HHHHhhcCCccccC
Q 042809 21 QALRNEAEIRQSLNSPNI-GR--NGEKTVNIFMEYMA--GGSLLDVAEKFGGTLDAGV-IRLY---TKEILHGNGILHCD 91 (241)
Q Consensus 21 ~~~~~e~~~l~~l~h~~i-~~--~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~-~~~~---~~~~Lh~~~~vH~d 91 (241)
....+|.+.|.++...++ ++ ..-..-++||||++ |..+..+....-....... ...+ +...+|..|++|||
T Consensus 53 ~~~~~E~~~L~~l~~~Gv~vP~p~~~~~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~givHGD 132 (188)
T PF01163_consen 53 EWAKKEFRNLKRLYEAGVPVPKPYDYNRNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAGIVHGD 132 (188)
T ss_dssp HHHHHHHHHHHHCCCTT-SS--EEEEETTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS
T ss_pred HHHHHHHHHHHHHHHCCccCCcEEEEeCCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcCceecC
Confidence 346789999999987665 33 22334579999998 6555544433101122222 2222 22347999999999
Q ss_pred CCCCcEEeecCCCeeecCCCcchhh
Q 042809 92 LKCNNVLLGSHGDVKLPDLGCARRV 116 (241)
Q Consensus 92 l~p~Nil~~~~~~~kl~dfg~~~~~ 116 (241)
|++.||+++.+ .+.++|||.+...
T Consensus 133 Ls~~NIlv~~~-~~~iIDf~qav~~ 156 (188)
T PF01163_consen 133 LSEYNILVDDG-KVYIIDFGQAVDS 156 (188)
T ss_dssp -STTSEEEETT-CEEE--GTTEEET
T ss_pred CChhhEEeecc-eEEEEecCcceec
Confidence 99999999776 9999999988643
No 447
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.08 E-value=1.3e-09 Score=83.35 Aligned_cols=110 Identities=22% Similarity=0.234 Sum_probs=74.3
Q ss_pred CCcEEEEEeccchH---HHH----------HHHHHHHHHhhcCCCcc-----cc--c--C---CceeeeeecccCCC-CH
Q 042809 5 TGALFVVKSAESEA---GVQ----------ALRNEAEIRQSLNSPNI-----GR--N--G---EKTVNIFMEYMAGG-SL 58 (241)
Q Consensus 5 ~~~~vaiK~~~~~~---~~~----------~~~~e~~~l~~l~h~~i-----~~--~--~---~~~~~lv~e~~~~~-~L 58 (241)
.|+.|.||...... ..+ .+.+|...+.++...+| +- . . ...-++|||++++. +|
T Consensus 44 ~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL 123 (268)
T PRK15123 44 AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISL 123 (268)
T ss_pred CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccH
Confidence 46789999764221 112 37788888887753333 32 1 1 34578999999875 89
Q ss_pred HHHHHHh-CCCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeec-------CCCeeecCCCcch
Q 042809 59 LDVAEKF-GGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGS-------HGDVKLPDLGCAR 114 (241)
Q Consensus 59 ~~~l~~~-~~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~-------~~~~kl~dfg~~~ 114 (241)
.+++... ....+......++.++ ||..|++|+|++++||+++. ++.+.++||+.+.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 124 EDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred HHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 9998643 2233333333333332 89999999999999999975 3578999999874
No 448
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.00 E-value=3.4e-09 Score=83.74 Aligned_cols=174 Identities=13% Similarity=0.144 Sum_probs=109.0
Q ss_pred eeeeeecccCCC-CHHHHHHHh--CC---CCCHHHHHHHHHH------HhhcCCccccCCCCCcEEeecCCCeeecCCCc
Q 042809 45 TVNIFMEYMAGG-SLLDVAEKF--GG---TLDAGVIRLYTKE------ILHGNGILHCDLKCNNVLLGSHGDVKLPDLGC 112 (241)
Q Consensus 45 ~~~lv~e~~~~~-~L~~~l~~~--~~---~~~~~~~~~~~~~------~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~ 112 (241)
...++|..+.|. ....+.... ++ ...+..+...++. -||+.|.+-||++++|++++.++.+.|.|-+.
T Consensus 84 ~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDs 163 (637)
T COG4248 84 VIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDS 163 (637)
T ss_pred eeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccc
Confidence 377888888764 333333221 11 1333333333332 28999999999999999999999999988554
Q ss_pred chhhcccccCCccccccccccCcccccCccccc-----ccCCCchhhHHHHHHHHHHHHhC-CCCCccchh----chHHH
Q 042809 113 ARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLR-----NEGLDFATDIWSLGCMVIEMATG-RPPWGDKIS----NAAAT 182 (241)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-----~~~~~~~~Di~slG~~l~~l~~g-~~p~~~~~~----~~~~~ 182 (241)
...-. ....+.+..|...|++||... +..-+...|.|.||+++++++.| +.||.+-.. ....+
T Consensus 164 fqi~~-------ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E 236 (637)
T COG4248 164 FQINA-------NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLE 236 (637)
T ss_pred eeecc-------CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcch
Confidence 32211 123455677899999999875 33345678999999999999984 999965110 00000
Q ss_pred --HH-------HHHhcC---CCCCCCh-hhHHHHHHHHHHhhcc--CCCCCCChHHHh
Q 042809 183 --LL-------KIACSN---EKPHFPT-QFFKKVLDFLAKCLER--KPEKRWSAEELL 225 (241)
Q Consensus 183 --~~-------~~~~~~---~~~~~~~-~~~~~~~~li~~~l~~--~p~~Rps~~~~l 225 (241)
+. .....+ .+...|. -+++++..++.+|+.. ++.-|||++..+
T Consensus 237 ~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~ 294 (637)
T COG4248 237 TDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWV 294 (637)
T ss_pred hhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHH
Confidence 00 000001 1111222 2557899999999985 356899987643
No 449
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.92 E-value=1.9e-09 Score=88.07 Aligned_cols=212 Identities=23% Similarity=0.205 Sum_probs=135.4
Q ss_pred CCCcEEEEEeccchH----HHHHHHHHHHHHhhcC-CCcccc-----cCCceeeeeecccCCCCHHHHHHHhCCCCCHHH
Q 042809 4 GTGALFVVKSAESEA----GVQALRNEAEIRQSLN-SPNIGR-----NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGV 73 (241)
Q Consensus 4 ~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~ 73 (241)
.++.+|++|...+.. ....-..|+.+...+. |.|++. ....+.|+=.|||+++++...+.. ...+++..
T Consensus 289 ~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~-~~~~d~~~ 367 (524)
T KOG0601|consen 289 EGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVT-SQMLDEDP 367 (524)
T ss_pred CCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchhhhhHH-HHhcCcch
Confidence 567788888655321 1111234444444444 666655 455667788999999888776633 34455555
Q ss_pred HHHHHHHH------hhcCCccccCCCCCcEEeecC-CCeeecCCCcchhhcccccCCccccccccccCcccc-cCccccc
Q 042809 74 IRLYTKEI------LHGNGILHCDLKCNNVLLGSH-GDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLW-MAPEVLR 145 (241)
Q Consensus 74 ~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~aPE~~~ 145 (241)
.+....|+ +|+..++|+|++|+||++..+ +..+++||+.+..+.-. .. .....+..| .++....
T Consensus 368 ~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~--~~------~~~~~~r~~p~~~~~~e 439 (524)
T KOG0601|consen 368 RLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFS--SG------VFHHIDRLYPIAEILLE 439 (524)
T ss_pred hhhhHHHHHhccccccchhhhcccccccceeeccchhhhhcccccccccccee--cc------cccccccccccchhhcc
Confidence 55555554 699999999999999999886 77889999988642110 00 011123334 3555556
Q ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHh
Q 042809 146 NEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELL 225 (241)
Q Consensus 146 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l 225 (241)
...+..++|+++||..+.+.+++..--..... ...+. .+..+.. +....++..+.+.++..++..|+++-++.
T Consensus 440 ~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~--~~~i~----~~~~p~~-~~~~~~~q~~~kv~~~~~~~~~~l~~~l~ 512 (524)
T KOG0601|consen 440 DYPHLSKADIFSLGLSVDEAITGSPLSESGVQ--SLTIR----SGDTPNL-PGLKLQLQVLLKVMINPDRKRRPSAVELS 512 (524)
T ss_pred ccccccccccccccccccccccCcccCccccc--ceeee----cccccCC-CchHHhhhhhhhhhcCCccccchhhhhhc
Confidence 67778899999999999999987644322111 11111 1122222 23337788899999999999999999988
Q ss_pred cCCCCC
Q 042809 226 NHTFIS 231 (241)
Q Consensus 226 ~~p~~~ 231 (241)
.|.-|.
T Consensus 513 ~~~~~~ 518 (524)
T KOG0601|consen 513 LHSEFY 518 (524)
T ss_pred ccchhh
Confidence 887543
No 450
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.89 E-value=1.6e-08 Score=73.99 Aligned_cols=67 Identities=24% Similarity=0.400 Sum_probs=48.0
Q ss_pred CCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHH--HHHhhcCCccccCCCCCcEEeecCCCeeecCCCcch
Q 042809 42 GEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYT--KEILHGNGILHCDLKCNNVLLGSHGDVKLPDLGCAR 114 (241)
Q Consensus 42 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~--~~~Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~ 114 (241)
.....++||||++|..|.++.. +++.....+. ..-||+.|++|||.+|.|++++ ++.++++||+...
T Consensus 114 ~~~~~~ll~EYIeG~~l~d~~~-----i~e~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~-~~~i~iID~~~k~ 182 (229)
T PF06176_consen 114 YTSSYVLLMEYIEGVELNDIED-----IDEDLAEKIVEAIKQLHKHGFYHGDPHPGNFLVS-NNGIRIIDTQGKR 182 (229)
T ss_pred ceeEEEEEEEEecCeecccchh-----cCHHHHHHHHHHHHHHHHcCCccCCCCcCcEEEE-CCcEEEEECcccc
Confidence 3456678999999988876543 2222211222 2348999999999999999997 4559999997664
No 451
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.87 E-value=9.7e-08 Score=77.43 Aligned_cols=192 Identities=16% Similarity=0.234 Sum_probs=134.3
Q ss_pred CCCCcEEEEEeccchH--HHHHHHHHHHHHhhcCCCcccc---------cCCceeeeeecccCC-CCHHHHHHH------
Q 042809 3 KGTGALFVVKSAESEA--GVQALRNEAEIRQSLNSPNIGR---------NGEKTVNIFMEYMAG-GSLLDVAEK------ 64 (241)
Q Consensus 3 ~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~---------~~~~~~~lv~e~~~~-~~L~~~l~~------ 64 (241)
+-+|..|++|++...+ ....--.-+++++++.|+|+|+ ..+..+++|++|.++ ++|.++-..
T Consensus 298 ~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~ 377 (655)
T KOG3741|consen 298 NVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFANPPFTK 377 (655)
T ss_pred ccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHccCCcccc
Confidence 4578899999984322 1122334578899999999988 577889999999975 678775432
Q ss_pred --------hCCCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccc
Q 042809 65 --------FGGTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQ 130 (241)
Q Consensus 65 --------~~~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 130 (241)
.+....+..++.++.|+ +|+.|+.-+-|.|.+|+++.+.+++|+..|......+..
T Consensus 378 ~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~---------- 447 (655)
T KOG3741|consen 378 RTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQEDP---------- 447 (655)
T ss_pred ccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecCCC----------
Confidence 12346678888888776 799999999999999999998899998888775443310
Q ss_pred cccCcccccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHh
Q 042809 131 SIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKC 210 (241)
Q Consensus 131 ~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 210 (241)
. +.+.+ ..+-|.-.||.++..+.||..-....+......+ . ..-..++.++++++.-+
T Consensus 448 --------~--~~le~---~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~-~--------~I~~~yS~D~rn~v~yl 505 (655)
T KOG3741|consen 448 --------T--EPLES---QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHL-T--------RITTTYSTDLRNVVEYL 505 (655)
T ss_pred --------C--cchhH---HhhhhHHHHHHHHHHHhhcccccccccchHHHHH-H--------HhhhhhhHHHHHHHHHH
Confidence 0 11111 2356999999999999998655322211111111 1 22345778899999999
Q ss_pred hccCCCCCCChHHHhcC
Q 042809 211 LERKPEKRWSAEELLNH 227 (241)
Q Consensus 211 l~~~p~~Rps~~~~l~~ 227 (241)
...++++ -++.+++.+
T Consensus 506 ~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 506 ESLNFRE-KSIQDLLPM 521 (655)
T ss_pred HhcCccc-ccHHHHHHH
Confidence 9988887 588887754
No 452
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.87 E-value=1.6e-08 Score=74.81 Aligned_cols=94 Identities=27% Similarity=0.344 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHhhcCCCcc-----cc------cCCceeeeeecccCC-CCHHHHHHHhCCCCCHHHHHHHHHHH------
Q 042809 20 VQALRNEAEIRQSLNSPNI-----GR------NGEKTVNIFMEYMAG-GSLLDVAEKFGGTLDAGVIRLYTKEI------ 81 (241)
Q Consensus 20 ~~~~~~e~~~l~~l~h~~i-----~~------~~~~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~------ 81 (241)
.....+|...+..|....| +. ......++|+|++++ .+|.+++..... .+......++.++
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~-~~~~~~~~ll~~l~~~i~~ 133 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ-LDPSQRRELLRALARLIAK 133 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc-cchhhHHHHHHHHHHHHHH
Confidence 3457788888887764444 22 122456899999987 489999986322 2222223333322
Q ss_pred hhcCCccccCCCCCcEEeecCC---CeeecCCCcch
Q 042809 82 LHGNGILHCDLKCNNVLLGSHG---DVKLPDLGCAR 114 (241)
Q Consensus 82 Lh~~~~vH~dl~p~Nil~~~~~---~~kl~dfg~~~ 114 (241)
||..|++|+|+++.|||++.++ .+.++||+-+.
T Consensus 134 lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~ 169 (206)
T PF06293_consen 134 LHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMR 169 (206)
T ss_pred HHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhce
Confidence 8999999999999999998887 79999998775
No 453
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.58 E-value=9.7e-08 Score=71.42 Aligned_cols=55 Identities=20% Similarity=0.251 Sum_probs=39.6
Q ss_pred CcEEEEEeccchH---HHHHHHHHHHHHhhcCCCcc-----cc--cCC---ceeeeeecccCCCCHHH
Q 042809 6 GALFVVKSAESEA---GVQALRNEAEIRQSLNSPNI-----GR--NGE---KTVNIFMEYMAGGSLLD 60 (241)
Q Consensus 6 ~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~h~~i-----~~--~~~---~~~~lv~e~~~~~~L~~ 60 (241)
|+.+++|...... ....+.+|++++..+.+.++ +. ... +..++||||++|.++.+
T Consensus 22 g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~ 89 (223)
T cd05154 22 GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRD 89 (223)
T ss_pred CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCCEecCC
Confidence 5789999977543 35678999999999875443 22 221 36789999999887754
No 454
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.58 E-value=2.1e-07 Score=69.92 Aligned_cols=92 Identities=25% Similarity=0.243 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHhhcCCC--cccc-cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHHH-HH--hhcCCccccCCC
Q 042809 20 VQALRNEAEIRQSLNSP--NIGR-NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTK-EI--LHGNGILHCDLK 93 (241)
Q Consensus 20 ~~~~~~e~~~l~~l~h~--~i~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~-~~--Lh~~~~vH~dl~ 93 (241)
.....+|.++|.+|... .|-+ ..-+.-.+|||+++|-.|...--. .-....+...++ .+ +-..|+||||++
T Consensus 153 Rl~A~rEf~~L~~L~~~G~~VP~P~~~nRHaVvMe~ieG~eL~~~r~~---~en~~~il~~il~~~~~~~~~GiVHGDlS 229 (304)
T COG0478 153 RLAAEREFEALQRLYPEGVKVPKPIAWNRHAVVMEYIEGVELYRLRLD---VENPDEILDKILEEVRKAYRRGIVHGDLS 229 (304)
T ss_pred HHHHHHHHHHHHHhhhcCCCCCCccccccceeeeehcccceeecccCc---ccCHHHHHHHHHHHHHHHHHcCccccCCc
Confidence 34467899999998755 3333 566677899999998777544311 122222222222 22 237999999999
Q ss_pred CCcEEeecCCCeeecCCCcch
Q 042809 94 CNNVLLGSHGDVKLPDLGCAR 114 (241)
Q Consensus 94 p~Nil~~~~~~~kl~dfg~~~ 114 (241)
+.||+++.+|.+.++||-.+.
T Consensus 230 efNIlV~~dg~~~vIDwPQ~v 250 (304)
T COG0478 230 EFNILVTEDGDIVVIDWPQAV 250 (304)
T ss_pred hheEEEecCCCEEEEeCcccc
Confidence 999999999999999996654
No 455
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.50 E-value=2.4e-07 Score=76.90 Aligned_cols=95 Identities=24% Similarity=0.430 Sum_probs=69.3
Q ss_pred HHHHHHHHhhcC-----CCc-----ccccCCceeeeeecccCCCCHHHHHHHhCCCCCH-----HHHHHHHHHHhhcCCc
Q 042809 23 LRNEAEIRQSLN-----SPN-----IGRNGEKTVNIFMEYMAGGSLLDVAEKFGGTLDA-----GVIRLYTKEILHGNGI 87 (241)
Q Consensus 23 ~~~e~~~l~~l~-----h~~-----i~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~-----~~~~~~~~~~Lh~~~~ 87 (241)
+.+|+..+.+++ .++ |..+....-.++|||++|..+.+...-.....+. .....++.|+++ .|+
T Consensus 208 y~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~~-dgf 286 (517)
T COG0661 208 YRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLLR-DGF 286 (517)
T ss_pred HHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHHh-cCc
Confidence 446666666663 233 2336778889999999999998885433344442 223444556666 999
Q ss_pred cccCCCCCcEEeecCCCeeecCCCcchhhcc
Q 042809 88 LHCDLKCNNVLLGSHGDVKLPDLGCARRVND 118 (241)
Q Consensus 88 vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 118 (241)
+|+|.+|.||+++.+|++.+.|||++....+
T Consensus 287 fHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 287 FHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred cccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 9999999999999999999999999976544
No 456
>PRK09902 hypothetical protein; Provisional
Probab=98.43 E-value=1.2e-06 Score=64.06 Aligned_cols=108 Identities=19% Similarity=0.209 Sum_probs=74.4
Q ss_pred cEEEEEecc--------chHHHHHHHHHHHHHhhcCCCccc-c----------cCCceeeeeecccCC-CCHHHHHHHhC
Q 042809 7 ALFVVKSAE--------SEAGVQALRNEAEIRQSLNSPNIG-R----------NGEKTVNIFMEYMAG-GSLLDVAEKFG 66 (241)
Q Consensus 7 ~~vaiK~~~--------~~~~~~~~~~e~~~l~~l~h~~i~-~----------~~~~~~~lv~e~~~~-~~L~~~l~~~~ 66 (241)
+.+-+|... -+.+...|.+|...+.+|..-+|- + .....-.||+|-++| .+|.+++....
T Consensus 42 ~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~ 121 (216)
T PRK09902 42 KKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHA 121 (216)
T ss_pred cEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEEEeCCCCccHHHHHhcCC
Confidence 456677643 134678899999999999754442 1 223457899997754 69999987632
Q ss_pred -CCCCHHHHHHHHHHH------hhcCCccccCCCCCcEEeecCCC--eeecCCCcch
Q 042809 67 -GTLDAGVIRLYTKEI------LHGNGILHCDLKCNNVLLGSHGD--VKLPDLGCAR 114 (241)
Q Consensus 67 -~~~~~~~~~~~~~~~------Lh~~~~vH~dl~p~Nil~~~~~~--~kl~dfg~~~ 114 (241)
.+.+......++.++ ||..|+.|+|+.+.||+++.+|. +.++||.-+.
T Consensus 122 ~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 122 VSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred cCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 123333222333222 89999999999999999987777 8999997654
No 457
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.20 E-value=9.1e-06 Score=72.22 Aligned_cols=200 Identities=22% Similarity=0.329 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHHhhcCCCcccc--------cCCc-eeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHHHHH------hh
Q 042809 19 GVQALRNEAEIRQSLNSPNIGR--------NGEK-TVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI------LH 83 (241)
Q Consensus 19 ~~~~~~~e~~~l~~l~h~~i~~--------~~~~-~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~------Lh 83 (241)
.......|...+.++.|+|++. ...+ ...+..++|...++.+.++. -+..+....+.+..++ +|
T Consensus 225 ~i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~-v~~i~~~~~r~~~~~~~~GL~~~h 303 (1351)
T KOG1035|consen 225 EIQTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQS-VGSIPLETLRILHQKLLEGLAYLH 303 (1351)
T ss_pred HHHHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhh-ccccCHHHHHHHHHHHhhhHHHHH
Confidence 3445567777888889999977 2222 34456789988899999887 4667777777776665 46
Q ss_pred cCCccccCCCCC---cEEeecCCCeeec--CCCcchhhcccccCCccccccccccCcccccCcccccccCCC--chhhHH
Q 042809 84 GNGILHCDLKCN---NVLLGSHGDVKLP--DLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLD--FATDIW 156 (241)
Q Consensus 84 ~~~~vH~dl~p~---Nil~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~--~~~Di~ 156 (241)
+..+.|.-+..+ +--.+..+.+.++ ||+......+..... ...-+..+.++|........ ...|+|
T Consensus 304 ~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~-------~~~~~~~~~~~e~~~~~~~~~~r~~dL~ 376 (1351)
T KOG1035|consen 304 SLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSF-------SDLLAEIRNADEDLKENTAKKSRLTDLW 376 (1351)
T ss_pred HhccceeEEecccccccccCccceeecchhhhcccccCCCcccch-------hhcCccccccccccccccchhhhhhHHH
Confidence 554444433333 1122233445555 777776554421111 11224456677777655544 346999
Q ss_pred HHHHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCCCcc
Q 042809 157 SLGCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGNAKK 236 (241)
Q Consensus 157 slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~~~~ 236 (241)
++|.+...+..|..+-... ...... .+........+...+|+.-++++|+++.+++.|+|.+.....
T Consensus 377 ~lgll~~~~~~~~~i~~~~--~~~~~~-----------l~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~~~~~ 443 (1351)
T KOG1035|consen 377 CLGLLLLQLSQGEDISEKS--AVPVSL-----------LDVLSTSELLDALPKCLDEDSEERLSALELLTHPFLRFPTDN 443 (1351)
T ss_pred HHHHHHhhhhhcCcccccc--cchhhh-----------hccccchhhhhhhhhhcchhhhhccchhhhhhchhccccccc
Confidence 9999999998866553221 000000 111111156788899999999999999999999999877665
Q ss_pred CCC
Q 042809 237 NST 239 (241)
Q Consensus 237 ~~~ 239 (241)
.+.
T Consensus 444 ~~~ 446 (1351)
T KOG1035|consen 444 ESS 446 (1351)
T ss_pred ccc
Confidence 543
No 458
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.11 E-value=1.3e-05 Score=66.77 Aligned_cols=77 Identities=21% Similarity=0.288 Sum_probs=54.4
Q ss_pred cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHH-----HHHHHHhhcCCccccCCCCCcEEeec----CCCeeecCCC
Q 042809 41 NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIR-----LYTKEILHGNGILHCDLKCNNVLLGS----HGDVKLPDLG 111 (241)
Q Consensus 41 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~-----~~~~~~Lh~~~~vH~dl~p~Nil~~~----~~~~kl~dfg 111 (241)
.......|+||||+|..+.+.-.-....++...+. .++.|++ ..|++|+|-+|.||+++. ++.+.+.|||
T Consensus 272 ~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~~qIf-~~GffHaDPHPGNilv~~~~~~~~~ivllDhG 350 (538)
T KOG1235|consen 272 DLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYLEQIF-KTGFFHADPHPGNILVRPNPEGDEEIVLLDHG 350 (538)
T ss_pred hcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHHHHHH-hcCCccCCCCCCcEEEecCCCCCccEEEEccc
Confidence 56668899999999987766543323334443332 2223444 467999999999999984 5679999999
Q ss_pred cchhhcc
Q 042809 112 CARRVND 118 (241)
Q Consensus 112 ~~~~~~~ 118 (241)
+.....+
T Consensus 351 l~~~is~ 357 (538)
T KOG1235|consen 351 LYAVISH 357 (538)
T ss_pred ccccccH
Confidence 9976544
No 459
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.10 E-value=1.3e-05 Score=56.60 Aligned_cols=105 Identities=25% Similarity=0.222 Sum_probs=76.1
Q ss_pred CCcEEEEEeccchHHHHHHHHHHHHHhhcCCCcccc--cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHHH--H
Q 042809 5 TGALFVVKSAESEAGVQALRNEAEIRQSLNSPNIGR--NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTK--E 80 (241)
Q Consensus 5 ~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~--~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~--~ 80 (241)
.|..+|+|+-+.++....+..|++++..+.-.++.+ ..-+.-.+.|||+.|.+|.+.-... +...+...+- -
T Consensus 44 ~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~yg~~~i~me~i~G~~L~~~~~~~----~rk~l~~vlE~a~ 119 (201)
T COG2112 44 RGGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYFYGEDFIRMEYIDGRPLGKLEIGG----DRKHLLRVLEKAY 119 (201)
T ss_pred cCceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCceEEEechhhhhhhhhcCcchhhhhhcc----cHHHHHHHHHHHH
Confidence 466899999998888899999999999999888776 2333344559999998998776641 2222222222 2
Q ss_pred HhhcCCccccCCCC--CcEEeecCCCeeecCCCcch
Q 042809 81 ILHGNGILHCDLKC--NNVLLGSHGDVKLPDLGCAR 114 (241)
Q Consensus 81 ~Lh~~~~vH~dl~p--~Nil~~~~~~~kl~dfg~~~ 114 (241)
.|-..||-|+.|.- .||++ .++.+.|+||+.++
T Consensus 120 ~LD~~GI~H~El~~~~k~vlv-~~~~~~iIDFd~At 154 (201)
T COG2112 120 KLDRLGIEHGELSRPWKNVLV-NDRDVYIIDFDSAT 154 (201)
T ss_pred HHHHhccchhhhcCCceeEEe-cCCcEEEEEccchh
Confidence 26788999998864 45555 55699999999886
No 460
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.09 E-value=2.9e-05 Score=58.32 Aligned_cols=108 Identities=14% Similarity=0.203 Sum_probs=66.2
Q ss_pred CcEEEEEeccchHHHHHHHHHHHHHhhcCC-----Ccccc--cCCceeeeeecccCCCC-HH--------------HHHH
Q 042809 6 GALFVVKSAESEAGVQALRNEAEIRQSLNS-----PNIGR--NGEKTVNIFMEYMAGGS-LL--------------DVAE 63 (241)
Q Consensus 6 ~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~--~~~~~~~lv~e~~~~~~-L~--------------~~l~ 63 (241)
|..+++|............+|.+.+..+.. |.++. ...+..++|||+++|.+ +. ..+.
T Consensus 22 ~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~~~~~~~~~~~~~~l~~~la 101 (226)
T TIGR02172 22 TGKWMLKLYNPGFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSFSRIISDNPSRLEEIAKIFA 101 (226)
T ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccchhhhhcCCHHHHHHHHHHHH
Confidence 446778887754445667899999988753 33333 45666789999999863 11 1111
Q ss_pred H-----hCC---CCC------------------HHHHHHHHHHHhh----cCCccccCCCCCcEEeecCCCeeecCCCcc
Q 042809 64 K-----FGG---TLD------------------AGVIRLYTKEILH----GNGILHCDLKCNNVLLGSHGDVKLPDLGCA 113 (241)
Q Consensus 64 ~-----~~~---~~~------------------~~~~~~~~~~~Lh----~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~ 113 (241)
. +.. ... .......+..+|. ...++|+|++|.||+++.++ +.++||+.+
T Consensus 102 ~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a 180 (226)
T TIGR02172 102 EMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQIGNLITSGKG-TYWIDLGDF 180 (226)
T ss_pred HHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCCCCcEEEcCCC-cEEEechhc
Confidence 1 010 000 0011111222222 23478999999999998877 999999877
Q ss_pred h
Q 042809 114 R 114 (241)
Q Consensus 114 ~ 114 (241)
.
T Consensus 181 ~ 181 (226)
T TIGR02172 181 G 181 (226)
T ss_pred C
Confidence 4
No 461
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.03 E-value=2e-05 Score=58.79 Aligned_cols=93 Identities=16% Similarity=0.170 Sum_probs=56.4
Q ss_pred HHHHHHHhhcCCCcc-cc--cCCceeeeeecccCCC-CHHHHHHHhCCCC-CHHHHHHHHH----HHhhcCCccccCCCC
Q 042809 24 RNEAEIRQSLNSPNI-GR--NGEKTVNIFMEYMAGG-SLLDVAEKFGGTL-DAGVIRLYTK----EILHGNGILHCDLKC 94 (241)
Q Consensus 24 ~~e~~~l~~l~h~~i-~~--~~~~~~~lv~e~~~~~-~L~~~l~~~~~~~-~~~~~~~~~~----~~Lh~~~~vH~dl~p 94 (241)
.+|..-|+++.-.+| ++ ..-..-.|||||+... .=.-.|+.-+... ....+...+. .+++..++||+||+.
T Consensus 116 ~kEf~NL~R~~eAGVrvP~Pi~~~~nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSE 195 (268)
T COG1718 116 RKEFRNLKRAYEAGVRVPEPIAFRNNVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSE 195 (268)
T ss_pred HHHHHHHHHHHHcCCCCCCceeecCCeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchh
Confidence 356666777654443 11 3444667899999543 1111223211111 1111222222 225779999999999
Q ss_pred CcEEeecCCCeeecCCCcchhhc
Q 042809 95 NNVLLGSHGDVKLPDLGCARRVN 117 (241)
Q Consensus 95 ~Nil~~~~~~~kl~dfg~~~~~~ 117 (241)
.||++. ++.+.++|++.+....
T Consensus 196 yNiL~~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 196 YNILVH-DGEPYIIDVSQAVTID 217 (268)
T ss_pred hheEEE-CCeEEEEECccccccC
Confidence 999998 8999999999886543
No 462
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.81 E-value=8.2e-05 Score=56.60 Aligned_cols=54 Identities=19% Similarity=0.157 Sum_probs=36.6
Q ss_pred CcEEEEEeccchHHHHHHHHHHHHHhhcCC----Ccccc--cCCceeeeeecccCCCCHHH
Q 042809 6 GALFVVKSAESEAGVQALRNEAEIRQSLNS----PNIGR--NGEKTVNIFMEYMAGGSLLD 60 (241)
Q Consensus 6 ~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h----~~i~~--~~~~~~~lv~e~~~~~~L~~ 60 (241)
+..+++|...... ...+.+|+++++.+.. |.++. ..++..++|||+++|.+|..
T Consensus 22 ~~~~~vk~~~~~~-~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~ 81 (244)
T cd05150 22 NPGLYLKIAPSGP-TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAA 81 (244)
T ss_pred CCcEEEEecCCCc-ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhH
Confidence 3578888877543 4457788888888752 22222 33356789999999887764
No 463
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.71 E-value=0.00049 Score=52.04 Aligned_cols=30 Identities=27% Similarity=0.340 Sum_probs=25.1
Q ss_pred CCccccCCCCCcEEeecCCCeeecCCCcch
Q 042809 85 NGILHCDLKCNNVLLGSHGDVKLPDLGCAR 114 (241)
Q Consensus 85 ~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~ 114 (241)
.+++|||+++.||+++.++...|+||+.+.
T Consensus 164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~ 193 (235)
T cd05155 164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLG 193 (235)
T ss_pred ceEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence 458999999999999866556799998774
No 464
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.69 E-value=0.00014 Score=56.98 Aligned_cols=30 Identities=30% Similarity=0.370 Sum_probs=26.6
Q ss_pred CCccccCCCCCcEEeecCCCeeecCCCcch
Q 042809 85 NGILHCDLKCNNVLLGSHGDVKLPDLGCAR 114 (241)
Q Consensus 85 ~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~ 114 (241)
.+++|+|++|.||+++.++.+.|+||+.+.
T Consensus 175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~ 204 (296)
T cd05153 175 RGVIHADLFRDNVLFDGDELSGVIDFYFAC 204 (296)
T ss_pred CcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence 579999999999999887777899998875
No 465
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.66 E-value=0.00048 Score=50.43 Aligned_cols=89 Identities=20% Similarity=0.211 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHhhcC-CC-----cccc-----cCCceeeeeecccCC------CCHHHHHHHhCCCCCH--HHHHHHHH
Q 042809 19 GVQALRNEAEIRQSLN-SP-----NIGR-----NGEKTVNIFMEYMAG------GSLLDVAEKFGGTLDA--GVIRLYTK 79 (241)
Q Consensus 19 ~~~~~~~e~~~l~~l~-h~-----~i~~-----~~~~~~~lv~e~~~~------~~L~~~l~~~~~~~~~--~~~~~~~~ 79 (241)
...+..+|+.....+. .. +|.+ +++.-..+|+|.+.. .||.+++.. ..++. ..+..-+.
T Consensus 54 ~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~--~~~~~~~~~~L~~f~ 131 (199)
T PF10707_consen 54 RYRQNRRELRYYKQLSLRRGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKE--GGLTEELRQALDEFK 131 (199)
T ss_pred hhHHHHHHHHHHHHHhhccCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHc--CCccHHHHHHHHHHH
Confidence 4567788888887777 43 3433 666677888887742 378999975 33444 22333345
Q ss_pred HHhhcCCccccCCCCCcEEeecCC----CeeecC
Q 042809 80 EILHGNGILHCDLKCNNVLLGSHG----DVKLPD 109 (241)
Q Consensus 80 ~~Lh~~~~vH~dl~p~Nil~~~~~----~~kl~d 109 (241)
++|-+.+|+.+|++|.||++...+ .+.|+|
T Consensus 132 ~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlID 165 (199)
T PF10707_consen 132 RYLLDHHIVIRDLNPHNIVVQRRDSGEFRLVLID 165 (199)
T ss_pred HHHHHcCCeecCCCcccEEEEecCCCceEEEEEe
Confidence 668899999999999999996543 366666
No 466
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.64 E-value=0.00023 Score=54.60 Aligned_cols=108 Identities=20% Similarity=0.265 Sum_probs=62.9
Q ss_pred CCcEEEEEeccchHHH--HHHHHHHHHHhhcCCCcccc----cCCceeeeeecccCCCCHHH--------------HHHH
Q 042809 5 TGALFVVKSAESEAGV--QALRNEAEIRQSLNSPNIGR----NGEKTVNIFMEYMAGGSLLD--------------VAEK 64 (241)
Q Consensus 5 ~~~~vaiK~~~~~~~~--~~~~~e~~~l~~l~h~~i~~----~~~~~~~lv~e~~~~~~L~~--------------~l~~ 64 (241)
+|+.+++|........ -...+|.++++.+....+++ ... -++|+||++|.++.. .+..
T Consensus 18 ~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~--~~~v~e~i~G~~~~~~~~~~~~~~~~la~~l~~ 95 (256)
T TIGR02721 18 PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE--HWLLVEWLEGEVITLDQFVALDLLLELAALLHQ 95 (256)
T ss_pred CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC--CEEEEEeccCcccccccccCchhHHHHHHHHHH
Confidence 4567888876543211 13578888888886433433 322 478999999866532 1111
Q ss_pred h-CC-----CCCHH-HHHHHHH----------------HHhh-------cCCccccCCCCCcEEeecCCCeeecCCCcch
Q 042809 65 F-GG-----TLDAG-VIRLYTK----------------EILH-------GNGILHCDLKCNNVLLGSHGDVKLPDLGCAR 114 (241)
Q Consensus 65 ~-~~-----~~~~~-~~~~~~~----------------~~Lh-------~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~ 114 (241)
- .. +++.. .+..+.. .+.. ...++|+|+.|.||+++.++ +.++||+.+.
T Consensus 96 lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~ 174 (256)
T TIGR02721 96 LHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVVTPQG-LKLIDWEYAS 174 (256)
T ss_pred HhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcEEEeCCC-CEEEeccccC
Confidence 1 11 11111 1111111 1111 13589999999999998877 7899998875
Q ss_pred h
Q 042809 115 R 115 (241)
Q Consensus 115 ~ 115 (241)
.
T Consensus 175 ~ 175 (256)
T TIGR02721 175 D 175 (256)
T ss_pred c
Confidence 3
No 467
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.62 E-value=0.00053 Score=54.12 Aligned_cols=31 Identities=29% Similarity=0.349 Sum_probs=27.5
Q ss_pred cCCccccCCCCCcEEeecCCCeeecCCCcch
Q 042809 84 GNGILHCDLKCNNVLLGSHGDVKLPDLGCAR 114 (241)
Q Consensus 84 ~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~ 114 (241)
..+++|+|+++.||+++.++.+.|+||+.+.
T Consensus 186 ~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 186 PRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred CCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 3789999999999999988777899999874
No 468
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=97.60 E-value=0.00028 Score=53.07 Aligned_cols=54 Identities=24% Similarity=0.319 Sum_probs=39.8
Q ss_pred cEEEEEeccchHHHHHHHHHHHHHhhcCCCc-----ccc-----cCCceeeeeecccCCCCHHH
Q 042809 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPN-----IGR-----NGEKTVNIFMEYMAGGSLLD 60 (241)
Q Consensus 7 ~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~-----i~~-----~~~~~~~lv~e~~~~~~L~~ 60 (241)
..+++|..........+.+|..++..+.... ++. ......+++|++++|.++..
T Consensus 21 ~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 84 (239)
T PF01636_consen 21 GRYVLKFYRPPDAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGRPLDD 84 (239)
T ss_dssp SEEEEEEESSHHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSEEHHH
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccccccc
Confidence 5889999887756778889999988886333 332 23335789999999987776
No 469
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.56 E-value=0.00014 Score=56.60 Aligned_cols=90 Identities=16% Similarity=0.137 Sum_probs=63.8
Q ss_pred HHHHHHHHhhcC-CCcccc--cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHHHHH---hhcCCccccCCCCCc
Q 042809 23 LRNEAEIRQSLN-SPNIGR--NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEI---LHGNGILHCDLKCNN 96 (241)
Q Consensus 23 ~~~e~~~l~~l~-h~~i~~--~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~---Lh~~~~vH~dl~p~N 96 (241)
..+|...|+.|. |---|+ .+-+.-++|||++.|-+|...-.- .+...+-.-+..+ |-..|++|||.+--|
T Consensus 157 a~kEfafmkaL~e~gfpVPkpiD~~RH~Vvmelv~g~Pl~~v~~v----~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFN 232 (465)
T KOG2268|consen 157 ATKEFAFMKALYERGFPVPKPIDHNRHCVVMELVDGYPLRQVRHV----EDPPTLYDDLMGLIVRLANHGLIHGDFNEFN 232 (465)
T ss_pred HHHHHHHHHHHHHcCCCCCCcccccceeeHHHhhcccceeeeeec----CChHHHHHHHHHHHHHHHHcCceecccchhe
Confidence 457888888886 333344 667778999999998887654332 2222222222222 678999999999999
Q ss_pred EEeecCCCeeecCCCcchhh
Q 042809 97 VLLGSHGDVKLPDLGCARRV 116 (241)
Q Consensus 97 il~~~~~~~kl~dfg~~~~~ 116 (241)
|+++.++.++++||--+...
T Consensus 233 imv~dd~~i~vIDFPQmvS~ 252 (465)
T KOG2268|consen 233 IMVKDDDKIVVIDFPQMVST 252 (465)
T ss_pred eEEecCCCEEEeechHhhcc
Confidence 99999999999999766543
No 470
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.49 E-value=0.00038 Score=54.77 Aligned_cols=30 Identities=30% Similarity=0.275 Sum_probs=26.4
Q ss_pred CCccccCCCCCcEEeecC----CCeeecCCCcch
Q 042809 85 NGILHCDLKCNNVLLGSH----GDVKLPDLGCAR 114 (241)
Q Consensus 85 ~~~vH~dl~p~Nil~~~~----~~~kl~dfg~~~ 114 (241)
.+++|+|+.+.||+++.+ +.+.++||+.+.
T Consensus 179 ~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~ 212 (302)
T cd05156 179 VVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS 212 (302)
T ss_pred ceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence 357999999999999875 889999998884
No 471
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.47 E-value=6.4e-05 Score=69.16 Aligned_cols=204 Identities=13% Similarity=-0.011 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHhhcCCCcccc-------cCCceeeeeecccCCCCHHHHHHHhC---CCCCHHHHHHHHHH-H-----hh
Q 042809 20 VQALRNEAEIRQSLNSPNIGR-------NGEKTVNIFMEYMAGGSLLDVAEKFG---GTLDAGVIRLYTKE-I-----LH 83 (241)
Q Consensus 20 ~~~~~~e~~~l~~l~h~~i~~-------~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~-~-----Lh 83 (241)
.+....|...++...|+++.. ......|..++|+.+|.+++.+-+.- ..+...-+...-.+ + +|
T Consensus 1273 kemll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~l 1352 (2724)
T KOG1826|consen 1273 KEMLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVIL 1352 (2724)
T ss_pred HHhhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhh
Confidence 444556666666778888755 55667899999999999999887632 22222222211112 1 12
Q ss_pred c-----CCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCchhhHHHH
Q 042809 84 G-----NGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSL 158 (241)
Q Consensus 84 ~-----~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~sl 158 (241)
+ .--+|+++++.|.++..+..++++++|+.+...+. ....+...+++-|+++++...-.++.++|+|..
T Consensus 1353 s~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~------~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~ 1426 (2724)
T KOG1826|consen 1353 SLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPV------LSFFGLELCSPIYVLQLIKNEIKFTKRSDILRR 1426 (2724)
T ss_pred hcccCCccchhhhhhhhccceecCCcccccccccccccCch------HhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHH
Confidence 1 22589999999999999999999999999732221 122234456777888998888888888999999
Q ss_pred HHHHHHHHhCCCCCccchhchHHHHHHHHhcCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCC
Q 042809 159 GCMVIEMATGRPPWGDKISNAAATLLKIACSNEKPHFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISG 232 (241)
Q Consensus 159 G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~ 232 (241)
|+.+|....|..+|-............. +.....+.-.|.+.-.+...++-.....||.-...+..+.+..
T Consensus 1427 s~~ly~rs~~n~~fi~flq~~Lkgiidn---~tf~sIe~l~pgdaNve~~~~Ll~K~~~rp~q~isls~d~~a~ 1497 (2724)
T KOG1826|consen 1427 SLSLYLRSDGNAYFIFFLQPALKGIIDN---HTFFSIEKLKPGDANVEALHRLLWKYMERPGQYISLSRDHFAV 1497 (2724)
T ss_pred HHHHHHHhcccHHHHHHHHHHHcCcccc---cccccccccCCCcccHHHHHHHHHHhhhcchhhhhcccccccc
Confidence 9999998888777643211111111111 1111222222333434444444555667777777666665543
No 472
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.40 E-value=1.9e-05 Score=66.19 Aligned_cols=187 Identities=26% Similarity=0.272 Sum_probs=112.7
Q ss_pred HHHHHHHHHhhcCCCc-ccc-----cCCceeeeeecccCCC-CHHHHHHHhCCCCCHHHHHHHHH-----------HHhh
Q 042809 22 ALRNEAEIRQSLNSPN-IGR-----NGEKTVNIFMEYMAGG-SLLDVAEKFGGTLDAGVIRLYTK-----------EILH 83 (241)
Q Consensus 22 ~~~~e~~~l~~l~h~~-i~~-----~~~~~~~lv~e~~~~~-~L~~~l~~~~~~~~~~~~~~~~~-----------~~Lh 83 (241)
..+-++++|.+++||| .+. +.+...+++++++.++ +...-+. .++.....+.. ..+|
T Consensus 279 ~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~~~~~-----~se~~~~~~~~~~~~r~et~~l~~l~ 353 (829)
T KOG0576|consen 279 SRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSALEMT-----VSEIALEQYQFAYPLRKETRPLAELH 353 (829)
T ss_pred hhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCccccccCC-----hhhHhhhhhhhhhhhhhhcccccccc
Confidence 3556789999999999 554 6677899999999776 2111110 11111111111 2245
Q ss_pred cCCccccCCCCCcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCchhhHHHHHHHHH
Q 042809 84 GNGILHCDLKCNNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVI 163 (241)
Q Consensus 84 ~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~ 163 (241)
+.--+|+| ||+. ..+..+..+|+......... ......+++.++|||......+....|.|++|.-..
T Consensus 354 ~~~~~~~d----~~l~-s~~~~~~~~~~v~~~L~~~~-------~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~ 421 (829)
T KOG0576|consen 354 SSYKVHRD----NILG-SEEEVKLLDFAVPPQLTRTM-------KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAI 421 (829)
T ss_pred cccccCcc----cccc-cccccccccccCCcccCccc-------ccccCCCCCCCCCchhhcccccccCCCccCCCcchh
Confidence 55456776 6666 44788999999886554421 223456899999999999888888999999998766
Q ss_pred HHHhCCCCCccchhchHHHHHHHHhcCCCCCCCh------hhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCC
Q 042809 164 EMATGRPPWGDKISNAAATLLKIACSNEKPHFPT------QFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISG 232 (241)
Q Consensus 164 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~ 232 (241)
++.-|-+|-......- ...+..+..+. +.+..-.++...|+...|..|+....++-|.+|.+
T Consensus 422 ~~ap~~pPr~~P~~~~-------~~~g~~p~s~~L~~~~aw~~~~~~~~~~~~~~g~P~~pkv~mgacfsKvfng 489 (829)
T KOG0576|consen 422 QMAPGLPPRSSPPAVL-------PMIGNGPNSPMLTDKSAWSPVFHRDFPAPCLNGLPPTPKVHMGACFSKVFNG 489 (829)
T ss_pred hcCCCCCCCCCCcccc-------CCCCCCCCccccchhhhcCcccccCCcccccCCCCCCCcchhhHHHHHHhcc
Confidence 6666666643210000 00000000000 00011123566688888888888888887777755
No 473
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.28 E-value=0.008 Score=43.76 Aligned_cols=92 Identities=21% Similarity=0.168 Sum_probs=62.6
Q ss_pred HHHHHHHhhcCC-Ccccc-cCCceeeeeecccCCCCHHHH---HHHhCCCCCHHHHHHHHHHHh------hc---CCccc
Q 042809 24 RNEAEIRQSLNS-PNIGR-NGEKTVNIFMEYMAGGSLLDV---AEKFGGTLDAGVIRLYTKEIL------HG---NGILH 89 (241)
Q Consensus 24 ~~e~~~l~~l~h-~~i~~-~~~~~~~lv~e~~~~~~L~~~---l~~~~~~~~~~~~~~~~~~~L------h~---~~~vH 89 (241)
.+|.-++..+++ +++.+ .+.....+|+||...+++... +.. -...++.....++.++| +. ..+.-
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG~~~v~E~~~~~~~~~~~~~l~~-~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~l 85 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCGRFYVVEYVGAGSLYGIYRPLSQ-FLQSPWEQRAKIALQLLELLEELDHGPLGFFYL 85 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECCCEEEEEeecCcccccccccccc-ccccCHHHHHHHHHHHHHHHHHHhcCCCCcEEE
Confidence 457788888886 45655 444456678899987655321 111 11245666666666664 11 33778
Q ss_pred cCCCCCcEEeecCCCeeecCCCcchhh
Q 042809 90 CDLKCNNVLLGSHGDVKLPDLGCARRV 116 (241)
Q Consensus 90 ~dl~p~Nil~~~~~~~kl~dfg~~~~~ 116 (241)
.|++++|+-++.+|++|++|.+.+...
T Consensus 86 cDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 86 CDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred eecchHHeEEeCCCcEEEEechhcchh
Confidence 899999999999999999999988654
No 474
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=97.16 E-value=0.0024 Score=52.95 Aligned_cols=160 Identities=23% Similarity=0.272 Sum_probs=94.3
Q ss_pred HHHHHHHHHHhhcCCCcccc------cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHHHHHhhcCCccccCCCC
Q 042809 21 QALRNEAEIRQSLNSPNIGR------NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTKEILHGNGILHCDLKC 94 (241)
Q Consensus 21 ~~~~~e~~~l~~l~h~~i~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~Lh~~~~vH~dl~p 94 (241)
..+.-...+++.+.|+|... ..-....+|+|+++ .+|.+++..+. +.... ++ ..++.|
T Consensus 27 ~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~-~Sled~~~~~~--l~~~s-------~~-~~~~~~----- 90 (725)
T KOG1093|consen 27 IQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHYT-MSLEDILKTGN--LKDES-------LL-AHGVLH----- 90 (725)
T ss_pred HHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhhc-cchHHHHHhcc--cchhh-------hc-ccccce-----
Confidence 44556678889999999854 33345889999994 69999998732 11111 11 222222
Q ss_pred CcEEeecCCCeeecCCCcchhhcccccCCccccccccccCcccccCcccccccCCCchhhHHHHHHHHHHHHhCCCCCcc
Q 042809 95 NNVLLGSHGDVKLPDLGCARRVNDLKNNGNLKQSWQSIGGTQLWMAPEVLRNEGLDFATDIWSLGCMVIEMATGRPPWGD 174 (241)
Q Consensus 95 ~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 174 (241)
-|++ +.+| .++... ... ..+++|||++|.++.++.-|..-+..
T Consensus 91 ~~~~-------~~td-~~~t~~-------------~~~----------------~~pKsdVwsl~~i~~el~L~~~l~~~ 133 (725)
T KOG1093|consen 91 LNII-------YITD-HFLTKY-------------PSP----------------IGPKSDVWSLGFIILELYLGISLEAE 133 (725)
T ss_pred ehhh-------hccc-cccccC-------------CCC----------------CCcchhhhhHHHHHHHHHHhhHHHHH
Confidence 2222 2233 111100 001 11489999999999999988776654
Q ss_pred chhchHHHHHHHHhcCCCC--------CCChhhHHHHHHHHHHhhccCCCCCCChHHHhcCCCCCCC
Q 042809 175 KISNAAATLLKIACSNEKP--------HFPTQFFKKVLDFLAKCLERKPEKRWSAEELLNHTFISGN 233 (241)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~p~~~~~ 233 (241)
.........+......... .+-...+..+..+...|+-..|..||...++..++-|...
T Consensus 134 ~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~i~~ev 200 (725)
T KOG1093|consen 134 LTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKRCSFTEV 200 (725)
T ss_pred HHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchhHHhcCccHHHH
Confidence 3332222221111110000 1112344567889999999999999999999998877543
No 475
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.00 E-value=0.002 Score=51.28 Aligned_cols=88 Identities=18% Similarity=0.217 Sum_probs=57.0
Q ss_pred HHHHHHHhhcCCCcccc---cCCceeeeeecccCCCC-HHHHHHHhCCCCCHHHHHHHHHH-------HhhcCCccccCC
Q 042809 24 RNEAEIRQSLNSPNIGR---NGEKTVNIFMEYMAGGS-LLDVAEKFGGTLDAGVIRLYTKE-------ILHGNGILHCDL 92 (241)
Q Consensus 24 ~~e~~~l~~l~h~~i~~---~~~~~~~lv~e~~~~~~-L~~~l~~~~~~~~~~~~~~~~~~-------~Lh~~~~vH~dl 92 (241)
..|.+-|++|....|-. ..-..-.|||+++.+.. -.-.|+. ..++...+..+-++ +-+..++||.||
T Consensus 214 EKE~RNLkRl~~aGIP~PePIlLk~hVLVM~FlGrdgw~aPkLKd--~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADL 291 (520)
T KOG2270|consen 214 EKEMRNLKRLNNAGIPCPEPILLKNHVLVMEFLGRDGWAAPKLKD--ASLSTSKARELYQQCVRIMRRLYQKCRLVHADL 291 (520)
T ss_pred HHHHHHHHHHHhcCCCCCCceeeecceEeeeeccCCCCcCccccc--ccCChHHHHHHHHHHHHHHHHHHHHhceeccch
Confidence 46777788887666432 22234568999995322 1222332 33444444433332 238899999999
Q ss_pred CCCcEEeecCCCeeecCCCcch
Q 042809 93 KCNNVLLGSHGDVKLPDLGCAR 114 (241)
Q Consensus 93 ~p~Nil~~~~~~~kl~dfg~~~ 114 (241)
.-.|+++ .+|.+.++|.+-+.
T Consensus 292 SEfN~Ly-hdG~lyiIDVSQSV 312 (520)
T KOG2270|consen 292 SEFNLLY-HDGKLYIIDVSQSV 312 (520)
T ss_pred hhhhheE-ECCEEEEEEccccc
Confidence 9999999 88999999987765
No 476
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.94 E-value=0.0062 Score=47.25 Aligned_cols=30 Identities=10% Similarity=0.144 Sum_probs=24.9
Q ss_pred CCcEEEEEeccchHHHHHHHHHHHHHhhcC
Q 042809 5 TGALFVVKSAESEAGVQALRNEAEIRQSLN 34 (241)
Q Consensus 5 ~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~ 34 (241)
.|..+++|..........+.+|++++..+.
T Consensus 34 ~g~~~VlR~p~~~~~~~~l~rE~~vL~~L~ 63 (276)
T cd05152 34 DGVPWVLRIPRRPDVSERAAAEKRVLALVR 63 (276)
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 477888998887666778899999999886
No 477
>PRK06148 hypothetical protein; Provisional
Probab=96.82 E-value=0.011 Score=54.25 Aligned_cols=31 Identities=26% Similarity=0.400 Sum_probs=26.0
Q ss_pred CCccccCCCCCcEEeecCC--Ce-eecCCCcchh
Q 042809 85 NGILHCDLKCNNVLLGSHG--DV-KLPDLGCARR 115 (241)
Q Consensus 85 ~~~vH~dl~p~Nil~~~~~--~~-kl~dfg~~~~ 115 (241)
.+++|+|+++.||+++.++ .+ -|+|||-+..
T Consensus 203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 203 AQVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred cceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 5699999999999998875 44 4999998764
No 478
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=96.51 E-value=0.013 Score=46.55 Aligned_cols=28 Identities=36% Similarity=0.469 Sum_probs=25.2
Q ss_pred ccccCCCCCcEEeecCCC-eeecCCCcch
Q 042809 87 ILHCDLKCNNVLLGSHGD-VKLPDLGCAR 114 (241)
Q Consensus 87 ~vH~dl~p~Nil~~~~~~-~kl~dfg~~~ 114 (241)
++|+|+.|.||+++.+.. ..++||+-+.
T Consensus 199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~ 227 (331)
T COG2334 199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAG 227 (331)
T ss_pred eeecCCCccceeEcCCCCeeeEEEccccc
Confidence 999999999999988875 8899998774
No 479
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.46 E-value=0.039 Score=41.29 Aligned_cols=52 Identities=23% Similarity=0.324 Sum_probs=38.4
Q ss_pred cEEEEEeccchHHHHHHHHHHHHHhhcCCCc------ccc--cCCceeeeeecccCCCCHH
Q 042809 7 ALFVVKSAESEAGVQALRNEAEIRQSLNSPN------IGR--NGEKTVNIFMEYMAGGSLL 59 (241)
Q Consensus 7 ~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~------i~~--~~~~~~~lv~e~~~~~~L~ 59 (241)
..+.+|+-..+. ...|..|+.-|..|.-.| ++. ....+.|+|+||++-+.+.
T Consensus 40 ~~~FvK~n~~~~-~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~d 99 (286)
T COG3001 40 DPFFVKCNQREQ-LSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPLD 99 (286)
T ss_pred cceEEEecchhh-HHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence 567788766554 577888988888776444 333 7788999999999877664
No 480
>PRK05231 homoserine kinase; Provisional
Probab=96.12 E-value=0.004 Score=49.38 Aligned_cols=30 Identities=30% Similarity=0.360 Sum_probs=25.8
Q ss_pred CCccccCCCCCcEEeecCCCeeecCCCcch
Q 042809 85 NGILHCDLKCNNVLLGSHGDVKLPDLGCAR 114 (241)
Q Consensus 85 ~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~ 114 (241)
.+++|+|++|.||+++.+....|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 187 RGVIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred cccCCCCCCCCcEEEECCceEEEEeccccc
Confidence 479999999999999866556899999885
No 481
>PRK10271 thiK thiamine kinase; Provisional
Probab=96.12 E-value=0.0045 Score=44.74 Aligned_cols=29 Identities=28% Similarity=0.439 Sum_probs=25.1
Q ss_pred CccccCCCCCcEEeecCCCeeecCCCcchh
Q 042809 86 GILHCDLKCNNVLLGSHGDVKLPDLGCARR 115 (241)
Q Consensus 86 ~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~ 115 (241)
..+|+|+.|.|++++.+| ++++||+.+..
T Consensus 78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~ 106 (188)
T PRK10271 78 APLHMDVHAGNLVHSASG-LRLIDWEYAGD 106 (188)
T ss_pred eeecCCCCCccEEEECCC-EEEEeCCcccC
Confidence 468999999999997776 89999998853
No 482
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=96.12 E-value=0.0037 Score=47.20 Aligned_cols=30 Identities=27% Similarity=0.305 Sum_probs=26.4
Q ss_pred CCccccCCCCCcEEeec-CCCeeecCCCcch
Q 042809 85 NGILHCDLKCNNVLLGS-HGDVKLPDLGCAR 114 (241)
Q Consensus 85 ~~~vH~dl~p~Nil~~~-~~~~kl~dfg~~~ 114 (241)
.+++|+|+.+.||+++. ++.+.++||..+.
T Consensus 170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~ 200 (235)
T cd05157 170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAG 200 (235)
T ss_pred EEEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence 46899999999999997 5789999998774
No 483
>PRK10593 hypothetical protein; Provisional
Probab=96.05 E-value=0.054 Score=42.56 Aligned_cols=51 Identities=18% Similarity=0.056 Sum_probs=34.4
Q ss_pred EEEEEeccchHHHHHHHHHHHHHhhcCC------Ccccc-----cCCceeeeeecccCCCCH
Q 042809 8 LFVVKSAESEAGVQALRNEAEIRQSLNS------PNIGR-----NGEKTVNIFMEYMAGGSL 58 (241)
Q Consensus 8 ~vaiK~~~~~~~~~~~~~e~~~l~~l~h------~~i~~-----~~~~~~~lv~e~~~~~~L 58 (241)
.+++|..+.......+.+|++.++.|.- |.++. ...+..++|||+++|+++
T Consensus 39 ~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~ 100 (297)
T PRK10593 39 NPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSV 100 (297)
T ss_pred CEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCCEec
Confidence 4667775542244688999999987753 33332 224668999999998754
No 484
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=95.95 E-value=0.033 Score=43.48 Aligned_cols=52 Identities=23% Similarity=0.351 Sum_probs=32.3
Q ss_pred CCCcEEEEEeccchHHHHHHHHHHHHHhhcC--CCcccc------cCCceeeeeecccCCC
Q 042809 4 GTGALFVVKSAESEAGVQALRNEAEIRQSLN--SPNIGR------NGEKTVNIFMEYMAGG 56 (241)
Q Consensus 4 ~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~--h~~i~~------~~~~~~~lv~e~~~~~ 56 (241)
.+++.+.+|.-. ......|..|++-|+.|. .+-.++ ...+.-++|+||++.+
T Consensus 38 ~~~~~~FvK~~~-~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 38 TDGGSYFVKVNS-ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp TTS-EEEEEEEE-GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred CCCccEEEEecC-hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence 467889999887 545678999999999884 333232 3445569999999765
No 485
>PLN02876 acyl-CoA dehydrogenase
Probab=95.85 E-value=0.083 Score=47.70 Aligned_cols=32 Identities=19% Similarity=0.365 Sum_probs=25.5
Q ss_pred CCccccCCCCCcEEeecC-CC-eeecCCCcchhh
Q 042809 85 NGILHCDLKCNNVLLGSH-GD-VKLPDLGCARRV 116 (241)
Q Consensus 85 ~~~vH~dl~p~Nil~~~~-~~-~kl~dfg~~~~~ 116 (241)
..++|+|+++.||+++.+ +. .-|.||+++..-
T Consensus 225 ~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~G 258 (822)
T PLN02876 225 TGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLG 258 (822)
T ss_pred cceEecCcccccEEEcCCCCeEEEEEeeeccccC
Confidence 359999999999999863 33 579999988643
No 486
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=95.73 E-value=0.0054 Score=45.53 Aligned_cols=30 Identities=37% Similarity=0.478 Sum_probs=21.3
Q ss_pred CCccccCCCCCcEEe-ecCCCeeecCCCcch
Q 042809 85 NGILHCDLKCNNVLL-GSHGDVKLPDLGCAR 114 (241)
Q Consensus 85 ~~~vH~dl~p~Nil~-~~~~~~kl~dfg~~~ 114 (241)
..++|+|+.+.||++ +.++.++++||..+.
T Consensus 143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~ 173 (211)
T PF01633_consen 143 LVFCHNDLNPGNILINNKDGEVKLIDFEYAG 173 (211)
T ss_dssp EEEE-S--SGGGEEETSSSSCEEE--GTT-E
T ss_pred ceEeeccCccccEEeccCCCeEEEecHHHHh
Confidence 357899999999999 888999999999885
No 487
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=95.70 E-value=0.061 Score=43.81 Aligned_cols=61 Identities=23% Similarity=0.235 Sum_probs=41.7
Q ss_pred CCceeeeeecccCCCCHHHHHHHhCCC--CCHHHHHHHHHHH---hhcCCccccCCCCCcEEeecC
Q 042809 42 GEKTVNIFMEYMAGGSLLDVAEKFGGT--LDAGVIRLYTKEI---LHGNGILHCDLKCNNVLLGSH 102 (241)
Q Consensus 42 ~~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~---Lh~~~~vH~dl~p~Nil~~~~ 102 (241)
......++-+|..|-++..+++..+++ +....+...+.++ |--.+++|.|++|.||++-.+
T Consensus 316 ~~~~~vl~E~~~~Gl~v~~~v~~~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~ 381 (565)
T KOG1236|consen 316 LHTDLVLVETYERGLSVLRFVKWKSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFN 381 (565)
T ss_pred ccccceeeeeccccccHHhhhhcccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEec
Confidence 344556778899999999999875444 2222333333333 456889999999999999544
No 488
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=95.55 E-value=0.0089 Score=46.14 Aligned_cols=31 Identities=32% Similarity=0.246 Sum_probs=27.9
Q ss_pred CCccccCCCCCcEEeecCCCeeecCCCcchh
Q 042809 85 NGILHCDLKCNNVLLGSHGDVKLPDLGCARR 115 (241)
Q Consensus 85 ~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~ 115 (241)
.-++|+|+.|.|++.+..|.++|+||..|..
T Consensus 153 ~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~ 183 (269)
T COG0510 153 LVPCHNDLNPGNLLLTDKGGLFLIDWEYAGL 183 (269)
T ss_pred eeeecCCCCccceEEcCCCcEEEEecccCCC
Confidence 3589999999999999999999999998863
No 489
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=94.98 E-value=0.017 Score=45.66 Aligned_cols=29 Identities=28% Similarity=0.455 Sum_probs=25.4
Q ss_pred CCccccCCCCCcEEeecCCCeeecCCCcch
Q 042809 85 NGILHCDLKCNNVLLGSHGDVKLPDLGCAR 114 (241)
Q Consensus 85 ~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~ 114 (241)
.+++|||+++.||+++. +.+.|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence 57899999999999987 678999998664
No 490
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=94.85 E-value=0.029 Score=44.86 Aligned_cols=74 Identities=16% Similarity=0.194 Sum_probs=49.4
Q ss_pred CCcccc-cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHHHHH---HHhh----cCCccccCCCCCcEEeecCCCee
Q 042809 35 SPNIGR-NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRLYTK---EILH----GNGILHCDLKCNNVLLGSHGDVK 106 (241)
Q Consensus 35 h~~i~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~---~~Lh----~~~~vH~dl~p~Nil~~~~~~~k 106 (241)
.+.+++ ......|++|++- |++|...-.. ..+.+..++. .++| ...+-|||++..||+++ +|.+-
T Consensus 289 ~~~vv~~de~~y~yl~~kdh-gt~is~ik~~-----~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~Gnvt 361 (488)
T COG5072 289 TLKVVSLDETLYLYLHFKDH-GTPISIIKAD-----RSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVT 361 (488)
T ss_pred cceEEecCCceEEEEEEecC-Cceeeeeecc-----cHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceE
Confidence 344555 5666788888887 5566433222 2333333332 3344 34578999999999998 99999
Q ss_pred ecCCCcchh
Q 042809 107 LPDLGCARR 115 (241)
Q Consensus 107 l~dfg~~~~ 115 (241)
|+||.++..
T Consensus 362 LIDfklsRl 370 (488)
T COG5072 362 LIDFKLSRL 370 (488)
T ss_pred EEEeeeeec
Confidence 999999873
No 491
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=94.83 E-value=0.013 Score=46.34 Aligned_cols=30 Identities=13% Similarity=0.124 Sum_probs=27.3
Q ss_pred CCccccCCCCCcEEeecCCCeeecCCCcch
Q 042809 85 NGILHCDLKCNNVLLGSHGDVKLPDLGCAR 114 (241)
Q Consensus 85 ~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~ 114 (241)
.+++|+|+.++|++++.++.+.++||..+.
T Consensus 196 ~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~ 225 (309)
T TIGR02904 196 TVLVHGKLSLSHFLYDETRGGYFINFEKAS 225 (309)
T ss_pred eeeeCCCCcHHhEEEcCCCCEEEEEhhhcc
Confidence 369999999999999999999999998875
No 492
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=94.52 E-value=0.12 Score=38.57 Aligned_cols=81 Identities=19% Similarity=0.181 Sum_probs=54.4
Q ss_pred HHHHHHHHHHhhcCCCcccc---cCCceeeeeecccCCCCHHHHHHHhCCCCCHHHHHH--HHHHHhh--cCCccccCCC
Q 042809 21 QALRNEAEIRQSLNSPNIGR---NGEKTVNIFMEYMAGGSLLDVAEKFGGTLDAGVIRL--YTKEILH--GNGILHCDLK 93 (241)
Q Consensus 21 ~~~~~e~~~l~~l~h~~i~~---~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~--~~~~~Lh--~~~~vH~dl~ 93 (241)
..+.++.+++.++. .|++ .+...+.++.|.|--... .....+.. -.+...| ..+.+|||-+
T Consensus 103 ~~y~nky~v~Armh--GilrL~NDn~~~yGvIlE~Cy~~~i----------~~~N~i~agi~~L~~fH~~~~~~lHGD~n 170 (308)
T PF07387_consen 103 ALYFNKYRVFARMH--GILRLKNDNNYKYGVILERCYKIKI----------NFSNFITAGIKDLMDFHSENQHCLHGDCN 170 (308)
T ss_pred hhhhhhhhHHHHhh--heeEeecCCCceeEEEEeeccCccc----------chhHHHHHhHHHHHHhhccCCCeecCCCC
Confidence 45677888877764 3444 566678899999953211 11111111 1223357 3679999999
Q ss_pred CCcEEeecCCCeeecCCCcc
Q 042809 94 CNNVLLGSHGDVKLPDLGCA 113 (241)
Q Consensus 94 p~Nil~~~~~~~kl~dfg~~ 113 (241)
|+||+-|..|-+||.|-+..
T Consensus 171 p~NiM~D~~G~lKlVDP~~L 190 (308)
T PF07387_consen 171 PDNIMCDKFGYLKLVDPVCL 190 (308)
T ss_pred hhheeecCCCCEEecChhhh
Confidence 99999999999999997644
No 493
>PLN02236 choline kinase
Probab=94.43 E-value=0.026 Score=45.31 Aligned_cols=31 Identities=23% Similarity=0.388 Sum_probs=26.5
Q ss_pred CCccccCCCCCcEEeec-CCCeeecCCCcchh
Q 042809 85 NGILHCDLKCNNVLLGS-HGDVKLPDLGCARR 115 (241)
Q Consensus 85 ~~~vH~dl~p~Nil~~~-~~~~kl~dfg~~~~ 115 (241)
..++|+|+++.||+++. ++.+.++||+.+..
T Consensus 200 ~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 200 IGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred ceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 46899999999999986 46799999998853
No 494
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=94.33 E-value=0.029 Score=41.17 Aligned_cols=31 Identities=32% Similarity=0.354 Sum_probs=25.5
Q ss_pred cCCccccCCCCCcEEeecCC-----CeeecCCCcch
Q 042809 84 GNGILHCDLKCNNVLLGSHG-----DVKLPDLGCAR 114 (241)
Q Consensus 84 ~~~~vH~dl~p~Nil~~~~~-----~~kl~dfg~~~ 114 (241)
...++|||+.+.||++..++ .+.++||..+.
T Consensus 119 ~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~ 154 (196)
T smart00587 119 FNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSH 154 (196)
T ss_pred ceEEeeCCCCccceeeccCCCCCccceEEEecccCC
Confidence 35689999999999997654 58999998774
No 495
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=93.95 E-value=0.042 Score=43.89 Aligned_cols=29 Identities=24% Similarity=0.399 Sum_probs=25.4
Q ss_pred ccccCCCCCcEEeec-CCCeeecCCCcchh
Q 042809 87 ILHCDLKCNNVLLGS-HGDVKLPDLGCARR 115 (241)
Q Consensus 87 ~vH~dl~p~Nil~~~-~~~~kl~dfg~~~~ 115 (241)
++|+|+.+.||+++. ++.++++||+.+..
T Consensus 184 ~CHnDl~~~NiL~~~~~~~l~lID~EYag~ 213 (330)
T PLN02421 184 FAHNDLLSGNLMLNEDEGKLYFIDFEYGSY 213 (330)
T ss_pred EEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence 789999999999975 47899999998853
No 496
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=93.46 E-value=0.057 Score=42.62 Aligned_cols=32 Identities=16% Similarity=0.153 Sum_probs=28.5
Q ss_pred CCccccCCCCCcEEeecCCCeeecCCCcchhh
Q 042809 85 NGILHCDLKCNNVLLGSHGDVKLPDLGCARRV 116 (241)
Q Consensus 85 ~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~~~ 116 (241)
-.++|||+++.|++++..+.+-++||+++..-
T Consensus 198 ~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG 229 (321)
T COG3173 198 PVLVHGDYRPGNLIIDPGRPTGVLDWELATLG 229 (321)
T ss_pred ceeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence 45899999999999999988999999998743
No 497
>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=92.96 E-value=0.14 Score=40.80 Aligned_cols=46 Identities=22% Similarity=0.288 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHh----------hcCCccccCCCCCcEEeecCC------------------CeeecCCCcchhh
Q 042809 71 AGVIRLYTKEIL----------HGNGILHCDLKCNNVLLGSHG------------------DVKLPDLGCARRV 116 (241)
Q Consensus 71 ~~~~~~~~~~~L----------h~~~~vH~dl~p~Nil~~~~~------------------~~kl~dfg~~~~~ 116 (241)
..-++.+++|+. .-...+|.||||+|||+=+.. ..+|.||+.+...
T Consensus 274 ~~YvkfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~~~~~vF~Epi~~~LnDFDfSqv~ 347 (434)
T PF05445_consen 274 VEYVKFIFLQIALLYIKIYELPCCTNFLHVDLKPDNILIFDSKEPIRIKFGNRNYVFKEPIRCCLNDFDFSQVA 347 (434)
T ss_pred HHHHHHHHHHHHHHHeeeecCCCcceeeecccCcCcEEEecCCCceEEEECCeEEEecccceeeecccCHHHhc
Confidence 344566667661 235689999999999993322 1567788777643
No 498
>PHA03111 Ser/Thr kinase; Provisional
Probab=92.89 E-value=0.12 Score=41.01 Aligned_cols=32 Identities=28% Similarity=0.342 Sum_probs=22.6
Q ss_pred CHHHHHHHHHHHh----------hcCCccccCCCCCcEEeec
Q 042809 70 DAGVIRLYTKEIL----------HGNGILHCDLKCNNVLLGS 101 (241)
Q Consensus 70 ~~~~~~~~~~~~L----------h~~~~vH~dl~p~Nil~~~ 101 (241)
-..-++.+++|++ .-..++|.||||+||++=+
T Consensus 277 ~~~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFd 318 (444)
T PHA03111 277 LVEYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFD 318 (444)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEec
Confidence 3444666677762 1356899999999999943
No 499
>PRK11768 serine/threonine protein kinase; Provisional
Probab=92.59 E-value=0.064 Score=42.77 Aligned_cols=28 Identities=32% Similarity=0.248 Sum_probs=23.8
Q ss_pred CCccccCCCCCcEEeecCCCeeecCCCcch
Q 042809 85 NGILHCDLKCNNVLLGSHGDVKLPDLGCAR 114 (241)
Q Consensus 85 ~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~ 114 (241)
.+++|+|+.+.||+++ + .+.++||+-+.
T Consensus 196 ~~liHgD~h~~NvL~~-d-~~~iIDFDd~~ 223 (325)
T PRK11768 196 LLRLHGDCHPGNILWR-D-GPHFVDLDDAR 223 (325)
T ss_pred ccceecCCCchhcccc-C-CcEEEeCCCCC
Confidence 4689999999999994 4 57899998874
No 500
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=92.38 E-value=0.09 Score=42.28 Aligned_cols=31 Identities=26% Similarity=0.433 Sum_probs=25.1
Q ss_pred hcCCccccCCCCCcEEeecCCCeeecCCCcch
Q 042809 83 HGNGILHCDLKCNNVLLGSHGDVKLPDLGCAR 114 (241)
Q Consensus 83 h~~~~vH~dl~p~Nil~~~~~~~kl~dfg~~~ 114 (241)
+...++|||+.+.||+++.+ .++++|+..+.
T Consensus 190 ~~~~llHGDl~~gNi~~~~~-~~~~iD~e~~~ 220 (370)
T TIGR01767 190 SAETLLHGDLHSGSIFVSEH-ETKVIDPEFAF 220 (370)
T ss_pred CcceeeeccCCcccEEEcCC-CCEEEcCcccc
Confidence 34678999999999999665 47799998664
Done!