Query 042810
Match_columns 230
No_of_seqs 192 out of 1525
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 17:01:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042810.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042810hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2l0b_A E3 ubiquitin-protein li 99.7 7.8E-18 2.7E-22 123.0 5.3 78 133-225 12-89 (91)
2 1x4j_A Ring finger protein 38; 99.7 1.1E-17 3.9E-22 117.5 0.9 68 143-226 6-73 (75)
3 2ecl_A Ring-box protein 2; RNF 99.6 9.1E-17 3.1E-21 114.9 2.2 67 161-227 11-78 (81)
4 1iym_A EL5; ring-H2 finger, ub 99.6 3.2E-16 1.1E-20 103.3 3.8 51 163-224 3-54 (55)
5 2ect_A Ring finger protein 126 99.6 4.3E-16 1.5E-20 110.0 4.1 57 162-229 12-68 (78)
6 2kiz_A E3 ubiquitin-protein li 99.6 5.2E-16 1.8E-20 107.0 3.7 55 161-226 10-64 (69)
7 2ep4_A Ring finger protein 24; 99.6 1E-15 3.5E-20 106.9 3.8 55 161-226 11-65 (74)
8 3ng2_A RNF4, snurf, ring finge 99.5 2.8E-15 9.4E-20 103.7 4.1 60 163-229 8-67 (71)
9 2ecm_A Ring finger and CHY zin 99.5 4.8E-15 1.6E-19 97.5 3.5 51 164-224 4-54 (55)
10 3dpl_R Ring-box protein 1; ubi 99.5 3.7E-15 1.3E-19 112.0 3.2 67 161-227 33-103 (106)
11 2xeu_A Ring finger protein 4; 99.5 5.8E-15 2E-19 99.8 3.4 59 164-229 2-60 (64)
12 2ea6_A Ring finger protein 4; 99.5 6.3E-15 2.2E-19 101.1 3.5 58 161-225 11-68 (69)
13 2d8t_A Dactylidin, ring finger 99.5 5.2E-15 1.8E-19 102.7 1.9 53 163-229 13-65 (71)
14 2djb_A Polycomb group ring fin 99.5 1.4E-14 4.8E-19 100.8 3.2 54 162-229 12-66 (72)
15 4a0k_B E3 ubiquitin-protein li 99.5 4.4E-15 1.5E-19 113.4 -0.3 68 160-227 43-114 (117)
16 1v87_A Deltex protein 2; ring- 99.5 3.3E-14 1.1E-18 107.3 4.3 63 164-226 24-95 (114)
17 2ecy_A TNF receptor-associated 99.4 2.1E-14 7.1E-19 98.2 2.3 54 162-229 12-66 (66)
18 2ysl_A Tripartite motif-contai 99.4 5.4E-14 1.9E-18 97.7 4.0 54 161-228 16-72 (73)
19 1chc_A Equine herpes virus-1 r 99.4 4.2E-14 1.4E-18 97.0 3.2 49 164-225 4-52 (68)
20 2ecn_A Ring finger protein 141 99.4 4.4E-14 1.5E-18 97.5 2.7 51 162-227 12-62 (70)
21 2ct2_A Tripartite motif protei 99.4 1.3E-13 4.3E-18 99.0 4.0 57 161-228 11-71 (88)
22 4ayc_A E3 ubiquitin-protein li 99.4 7.5E-14 2.6E-18 109.2 2.8 49 164-226 52-100 (138)
23 2yur_A Retinoblastoma-binding 99.4 1E-13 3.5E-18 97.0 3.0 52 162-227 12-66 (74)
24 1t1h_A Gspef-atpub14, armadill 99.4 1.6E-13 5.5E-18 96.6 3.4 53 163-229 6-59 (78)
25 2csy_A Zinc finger protein 183 99.4 1.8E-13 6.1E-18 97.2 3.2 49 162-224 12-60 (81)
26 3lrq_A E3 ubiquitin-protein li 99.4 6.8E-14 2.3E-18 103.6 1.0 53 163-229 20-74 (100)
27 2egp_A Tripartite motif-contai 99.4 8.5E-14 2.9E-18 98.0 1.0 54 161-228 8-68 (79)
28 2d8s_A Cellular modulator of i 99.4 1.8E-13 6.2E-18 97.6 2.6 54 162-227 12-72 (80)
29 2ecw_A Tripartite motif-contai 99.4 3.5E-13 1.2E-17 95.8 3.6 53 162-228 16-74 (85)
30 4ap4_A E3 ubiquitin ligase RNF 99.3 4.8E-13 1.6E-17 102.6 4.1 59 163-228 5-63 (133)
31 2ecv_A Tripartite motif-contai 99.3 3.3E-13 1.1E-17 95.9 2.9 54 162-229 16-75 (85)
32 2y43_A E3 ubiquitin-protein li 99.3 3.1E-13 1.1E-17 99.6 2.5 51 164-228 21-72 (99)
33 1g25_A CDK-activating kinase a 99.3 1.7E-12 6E-17 88.2 4.4 55 165-229 3-59 (65)
34 4ap4_A E3 ubiquitin ligase RNF 99.3 9.1E-13 3.1E-17 101.0 2.8 60 163-229 70-129 (133)
35 2ckl_A Polycomb group ring fin 99.3 1.6E-12 5.5E-17 97.2 3.2 51 162-226 12-63 (108)
36 2ysj_A Tripartite motif-contai 99.3 1.6E-12 5.5E-17 87.8 2.9 45 161-219 16-63 (63)
37 3fl2_A E3 ubiquitin-protein li 99.3 1.1E-12 3.8E-17 100.5 2.0 49 163-225 50-99 (124)
38 3ztg_A E3 ubiquitin-protein li 99.3 2E-12 6.8E-17 93.8 3.2 49 161-223 9-60 (92)
39 2ct0_A Non-SMC element 1 homol 99.2 2.9E-12 1E-16 89.9 3.1 51 163-226 13-65 (74)
40 2ecj_A Tripartite motif-contai 99.2 2.4E-12 8.1E-17 85.2 2.1 45 161-219 11-58 (58)
41 3hct_A TNF receptor-associated 99.2 1.7E-12 5.9E-17 98.7 1.4 54 161-228 14-68 (118)
42 1jm7_A BRCA1, breast cancer ty 99.2 2.6E-12 8.8E-17 96.2 2.2 51 165-229 21-74 (112)
43 1rmd_A RAG1; V(D)J recombinati 99.2 1.8E-12 6.2E-17 98.1 1.1 52 164-229 22-74 (116)
44 1bor_A Transcription factor PM 99.2 3.3E-12 1.1E-16 84.7 1.0 47 163-226 4-50 (56)
45 2kr4_A Ubiquitin conjugation f 99.2 1E-11 3.5E-16 89.3 3.2 53 163-229 12-64 (85)
46 1z6u_A NP95-like ring finger p 99.2 1.2E-11 4E-16 98.2 3.4 49 164-226 77-126 (150)
47 2ckl_B Ubiquitin ligase protei 99.2 1.2E-11 4.1E-16 99.2 3.3 48 165-226 54-103 (165)
48 2kre_A Ubiquitin conjugation f 99.2 1.6E-11 5.6E-16 91.0 3.6 53 163-229 27-79 (100)
49 1wgm_A Ubiquitin conjugation f 99.1 2.2E-11 7.5E-16 90.0 3.8 53 163-229 20-73 (98)
50 3l11_A E3 ubiquitin-protein li 99.1 9.1E-12 3.1E-16 94.0 1.6 47 165-225 15-62 (115)
51 2vje_A E3 ubiquitin-protein li 99.1 1.4E-11 4.7E-16 84.0 1.7 47 164-224 7-56 (64)
52 2y1n_A E3 ubiquitin-protein li 99.1 2.2E-11 7.4E-16 110.0 3.4 53 163-229 330-383 (389)
53 1e4u_A Transcriptional repress 99.1 2.8E-11 9.7E-16 85.7 2.7 56 162-229 8-66 (78)
54 1jm7_B BARD1, BRCA1-associated 99.1 1.7E-11 5.9E-16 93.0 1.5 49 164-228 21-70 (117)
55 3knv_A TNF receptor-associated 99.1 3.5E-11 1.2E-15 94.5 2.6 51 161-225 27-78 (141)
56 2vje_B MDM4 protein; proto-onc 99.1 3.1E-11 1E-15 82.0 1.8 47 164-224 6-55 (63)
57 4ic3_A E3 ubiquitin-protein li 99.1 2.3E-11 7.7E-16 85.1 1.0 44 164-225 23-67 (74)
58 3hcs_A TNF receptor-associated 99.0 8.8E-11 3E-15 94.5 1.2 54 161-228 14-68 (170)
59 2yu4_A E3 SUMO-protein ligase 99.0 1.5E-10 5E-15 84.7 1.7 53 163-229 5-67 (94)
60 2c2l_A CHIP, carboxy terminus 98.9 3.5E-10 1.2E-14 96.8 3.2 52 164-229 207-259 (281)
61 2ecg_A Baculoviral IAP repeat- 98.8 3E-10 1E-14 79.4 0.0 43 165-225 25-68 (75)
62 2ea5_A Cell growth regulator w 98.8 9.6E-10 3.3E-14 75.7 2.5 47 161-225 11-58 (68)
63 2f42_A STIP1 homology and U-bo 98.8 1E-09 3.4E-14 89.5 2.8 53 163-229 104-157 (179)
64 2yho_A E3 ubiquitin-protein li 98.8 5.2E-10 1.8E-14 79.3 0.6 44 164-225 17-61 (79)
65 3k1l_B Fancl; UBC, ring, RWD, 98.8 8.8E-10 3E-14 97.6 0.5 57 163-225 306-373 (381)
66 2bay_A PRE-mRNA splicing facto 98.7 2.3E-09 8E-14 72.2 1.4 50 166-229 4-54 (61)
67 1vyx_A ORF K3, K3RING; zinc-bi 98.7 3.2E-09 1.1E-13 71.4 2.0 49 163-225 4-59 (60)
68 3t6p_A Baculoviral IAP repeat- 98.6 7.9E-09 2.7E-13 92.3 2.4 45 163-225 293-338 (345)
69 1wim_A KIAA0161 protein; ring 98.6 6.3E-09 2.1E-13 75.7 0.7 51 165-226 5-67 (94)
70 3htk_C E3 SUMO-protein ligase 98.5 2.3E-08 8E-13 85.6 2.4 53 163-229 179-236 (267)
71 3vk6_A E3 ubiquitin-protein li 98.3 5.1E-07 1.7E-11 66.1 3.6 37 189-225 12-49 (101)
72 3nw0_A Non-structural maintena 98.0 3.7E-06 1.3E-10 71.3 4.1 50 164-226 179-230 (238)
73 2ko5_A Ring finger protein Z; 95.5 0.0043 1.5E-07 44.6 1.6 47 164-226 27-74 (99)
74 2lri_C Autoimmune regulator; Z 94.7 0.023 7.9E-07 38.2 3.2 48 162-223 9-60 (66)
75 2jun_A Midline-1; B-BOX, TRIM, 94.5 0.014 4.9E-07 42.0 1.9 35 165-210 3-38 (101)
76 1we9_A PHD finger family prote 90.2 0.1 3.6E-06 34.4 1.4 49 163-222 4-58 (64)
77 1mm2_A MI2-beta; PHD, zinc fin 89.4 0.14 4.9E-06 33.6 1.6 48 162-223 6-57 (61)
78 2l5u_A Chromodomain-helicase-D 88.9 0.25 8.5E-06 32.4 2.5 47 162-222 8-58 (61)
79 3m62_A Ubiquitin conjugation f 88.1 0.25 8.6E-06 49.2 3.0 52 164-229 890-942 (968)
80 2puy_A PHD finger protein 21A; 87.8 0.093 3.2E-06 34.3 -0.2 46 164-223 4-53 (60)
81 1wil_A KIAA1045 protein; ring 87.5 0.29 1E-05 34.4 2.2 34 161-209 11-47 (89)
82 1fp0_A KAP-1 corepressor; PHD 87.2 0.53 1.8E-05 33.4 3.5 51 161-226 21-76 (88)
83 2yql_A PHD finger protein 21A; 87.1 0.15 5.1E-06 32.8 0.5 46 162-221 6-55 (56)
84 2yt5_A Metal-response element- 85.9 0.23 7.8E-06 32.8 1.0 54 163-226 4-65 (66)
85 1xwh_A Autoimmune regulator; P 84.4 0.34 1.2E-05 32.2 1.3 45 163-222 6-55 (66)
86 2l43_A N-teminal domain from h 84.0 0.49 1.7E-05 33.4 2.0 56 163-228 23-81 (88)
87 2lbm_A Transcriptional regulat 83.5 0.7 2.4E-05 35.6 2.9 46 162-222 60-117 (142)
88 2k16_A Transcription initiatio 83.3 0.2 6.8E-06 34.1 -0.3 51 164-226 17-72 (75)
89 3ql9_A Transcriptional regulat 82.5 0.92 3.2E-05 34.4 3.1 45 162-221 54-110 (129)
90 2xb1_A Pygopus homolog 2, B-ce 81.9 0.35 1.2E-05 35.3 0.6 49 165-223 3-62 (105)
91 1z2q_A LM5-1; membrane protein 81.6 0.24 8.2E-06 34.6 -0.4 60 161-230 17-84 (84)
92 2ysm_A Myeloid/lymphoid or mix 80.2 0.69 2.4E-05 33.7 1.7 38 163-211 5-42 (111)
93 1f62_A Transcription factor WS 79.8 0.71 2.4E-05 28.8 1.4 30 192-221 15-49 (51)
94 2e6r_A Jumonji/ARID domain-con 75.0 0.67 2.3E-05 32.9 0.3 47 163-221 14-65 (92)
95 1wep_A PHF8; structural genomi 74.5 2.1 7.2E-05 29.2 2.7 48 165-223 12-64 (79)
96 3asl_A E3 ubiquitin-protein li 73.9 0.92 3.2E-05 30.5 0.7 31 192-222 33-69 (70)
97 3v43_A Histone acetyltransfera 73.8 1.4 4.8E-05 32.2 1.8 44 167-221 63-111 (112)
98 2e6s_A E3 ubiquitin-protein li 73.6 0.99 3.4E-05 31.0 0.9 45 165-221 26-76 (77)
99 2els_A Zinc finger protein 406 73.6 1.2 4.3E-05 24.2 1.2 19 14-32 4-22 (36)
100 2elr_A Zinc finger protein 406 72.3 1.6 5.3E-05 23.7 1.4 18 15-32 5-22 (36)
101 3i2d_A E3 SUMO-protein ligase 70.5 2.2 7.7E-05 37.9 2.6 51 165-229 249-304 (371)
102 4fo9_A E3 SUMO-protein ligase 70.1 2.4 8.2E-05 37.6 2.7 51 165-229 215-270 (360)
103 2lv9_A Histone-lysine N-methyl 70.0 1.6 5.6E-05 31.2 1.3 26 196-221 47-75 (98)
104 3lqh_A Histone-lysine N-methyl 69.7 1.8 6.3E-05 34.7 1.7 52 165-223 2-64 (183)
105 2kvg_A Zinc finger and BTB dom 67.6 1.7 5.9E-05 22.0 0.8 15 18-32 2-16 (27)
106 2kvh_A Zinc finger and BTB dom 67.1 2.2 7.4E-05 21.4 1.2 14 18-31 2-15 (27)
107 2vpb_A Hpygo1, pygopus homolog 66.8 3 0.0001 27.5 2.1 34 163-207 6-41 (65)
108 2kwj_A Zinc finger protein DPF 66.1 0.69 2.4E-05 34.1 -1.4 49 167-226 60-112 (114)
109 2kvf_A Zinc finger and BTB dom 65.6 2.2 7.6E-05 21.4 1.0 15 18-32 2-16 (28)
110 2m0e_A Zinc finger and BTB dom 65.6 2.2 7.4E-05 21.4 1.0 15 18-32 1-15 (29)
111 2elt_A Zinc finger protein 406 65.5 2.6 9E-05 22.6 1.4 17 16-32 6-22 (36)
112 3shb_A E3 ubiquitin-protein li 65.3 1.4 4.9E-05 30.2 0.2 25 197-221 47-76 (77)
113 1ard_A Yeast transcription fac 65.2 2.3 8E-05 21.4 1.0 15 18-32 1-15 (29)
114 2lvu_A Zinc finger and BTB dom 68.6 1.3 4.6E-05 22.0 0.0 17 18-34 1-17 (26)
115 2kgg_A Histone demethylase jar 64.6 2.9 9.9E-05 26.1 1.6 43 167-220 4-52 (52)
116 1p7a_A BF3, BKLF, kruppel-like 64.2 2.7 9.1E-05 22.9 1.2 17 16-32 8-24 (37)
117 2elx_A Zinc finger protein 406 64.1 2.8 9.6E-05 22.3 1.3 17 16-32 4-20 (35)
118 3ask_A E3 ubiquitin-protein li 63.7 2.2 7.5E-05 35.4 1.1 27 196-222 194-225 (226)
119 4gne_A Histone-lysine N-methyl 63.7 8.6 0.0003 27.9 4.2 46 162-224 12-64 (107)
120 2elq_A Zinc finger protein 406 63.5 3 0.0001 22.6 1.3 18 16-33 6-23 (36)
121 2gmg_A Hypothetical protein PF 63.5 1.9 6.5E-05 31.5 0.6 31 192-227 68-98 (105)
122 1znf_A 31ST zinc finger from X 62.9 2.5 8.4E-05 21.0 0.8 14 19-32 1-14 (27)
123 1rik_A E6APC1 peptide; E6-bind 62.8 2.5 8.5E-05 21.3 0.9 16 18-33 1-16 (29)
124 2ku3_A Bromodomain-containing 62.6 2.9 9.9E-05 28.1 1.3 51 161-221 12-65 (71)
125 2elv_A Zinc finger protein 406 61.7 3.4 0.00012 22.3 1.4 18 15-32 5-22 (36)
126 1wem_A Death associated transc 60.7 2.2 7.4E-05 28.9 0.4 46 165-222 16-70 (76)
127 4gzn_C ZFP-57, zinc finger pro 60.4 3.2 0.00011 26.6 1.2 17 16-32 1-17 (60)
128 3o70_A PHD finger protein 13; 60.1 2.7 9.3E-05 28.0 0.8 46 164-221 18-66 (68)
129 2elp_A Zinc finger protein 406 59.3 3.9 0.00013 22.2 1.3 17 16-32 6-22 (37)
130 2kfq_A FP1; protein, de novo p 58.4 3 0.0001 22.1 0.7 17 18-34 1-17 (32)
131 2kwj_A Zinc finger protein DPF 58.4 3.5 0.00012 30.1 1.3 40 166-209 2-41 (114)
132 2ri7_A Nucleosome-remodeling f 57.8 2.4 8E-05 33.2 0.2 47 164-221 7-58 (174)
133 1wev_A Riken cDNA 1110020M19; 57.6 1.9 6.5E-05 30.2 -0.3 50 164-223 15-73 (88)
134 1srk_A Zinc finger protein ZFP 57.3 4.2 0.00014 21.7 1.2 18 16-33 4-21 (35)
135 1rim_A E6APC2 peptide; E6-bind 57.3 3.4 0.00012 22.1 0.8 15 18-32 1-15 (33)
136 2m0d_A Zinc finger and BTB dom 57.1 3.7 0.00013 20.6 1.0 15 18-32 2-16 (30)
137 1fv5_A First zinc finger of U- 57.0 3 0.0001 24.0 0.6 17 16-32 5-21 (36)
138 1paa_A Yeast transcription fac 56.7 4 0.00014 20.6 1.0 15 18-32 1-15 (30)
139 2m0f_A Zinc finger and BTB dom 55.9 3.7 0.00013 20.5 0.8 14 19-32 2-15 (29)
140 1njq_A Superman protein; zinc- 55.6 4.4 0.00015 22.4 1.1 17 17-33 4-20 (39)
141 1klr_A Zinc finger Y-chromosom 55.1 4.3 0.00015 20.3 1.0 15 18-32 1-15 (30)
142 1iml_A CRIP, cysteine rich int 54.4 4.3 0.00015 26.8 1.1 8 198-205 20-27 (76)
143 1y02_A CARP2, FYVE-ring finger 54.3 2.8 9.5E-05 31.3 0.1 48 164-221 18-65 (120)
144 2yw8_A RUN and FYVE domain-con 53.9 7.4 0.00025 26.6 2.3 40 161-210 15-54 (82)
145 2cu8_A Cysteine-rich protein 2 53.7 6.1 0.00021 26.1 1.8 41 165-226 9-49 (76)
146 2yt9_A Zinc finger-containing 53.3 5.1 0.00017 26.8 1.4 21 13-33 1-21 (95)
147 2lvt_A Zinc finger and BTB dom 58.4 2.8 9.7E-05 21.2 0.0 17 18-34 1-17 (29)
148 1m3v_A FLIN4, fusion of the LI 52.9 8.1 0.00028 28.2 2.5 53 166-229 33-85 (122)
149 1z60_A TFIIH basal transcripti 52.8 5.8 0.0002 25.8 1.5 42 166-219 16-58 (59)
150 2el5_A Zinc finger protein 268 52.5 5.7 0.00019 22.2 1.3 19 16-34 7-25 (42)
151 2eln_A Zinc finger protein 406 52.5 5.9 0.0002 22.8 1.4 18 16-33 6-25 (38)
152 2lvr_A Zinc finger and BTB dom 57.6 3 0.0001 21.1 0.0 18 18-35 2-19 (30)
153 2elo_A Zinc finger protein 406 52.3 4.6 0.00016 21.8 0.8 17 16-32 6-22 (37)
154 3t7l_A Zinc finger FYVE domain 52.0 7 0.00024 27.3 1.9 49 163-221 18-72 (90)
155 2elm_A Zinc finger protein 406 51.8 5 0.00017 21.9 1.0 18 16-33 6-23 (37)
156 2yte_A Zinc finger protein 473 51.7 6.1 0.00021 22.0 1.4 18 16-33 7-24 (42)
157 3v43_A Histone acetyltransfera 51.7 9.3 0.00032 27.7 2.7 40 164-208 4-43 (112)
158 1wew_A DNA-binding family prot 51.0 4.5 0.00015 27.5 0.8 47 165-223 16-73 (78)
159 2ytb_A Zinc finger protein 32; 50.9 6.4 0.00022 21.9 1.4 20 16-35 8-27 (42)
160 2d8v_A Zinc finger FYVE domain 50.9 6.4 0.00022 26.2 1.5 34 162-210 5-39 (67)
161 1wee_A PHD finger family prote 50.5 2.8 9.6E-05 28.0 -0.4 46 165-222 16-66 (72)
162 2ept_A Zinc finger protein 32; 50.1 6.5 0.00022 21.8 1.3 19 16-34 7-25 (41)
163 2yts_A Zinc finger protein 484 49.5 6.7 0.00023 22.4 1.3 20 16-35 9-28 (46)
164 1vfy_A Phosphatidylinositol-3- 49.4 10 0.00035 25.3 2.4 35 165-209 11-45 (73)
165 1joc_A EEA1, early endosomal a 49.3 7.8 0.00027 28.8 1.9 38 163-210 67-104 (125)
166 2eof_A Zinc finger protein 268 49.0 6.7 0.00023 22.0 1.2 19 16-34 9-27 (44)
167 2yu5_A Zinc finger protein 473 48.5 7.1 0.00024 22.0 1.3 20 16-35 9-28 (44)
168 2emb_A Zinc finger protein 473 48.5 6.7 0.00023 22.2 1.2 20 16-35 9-28 (44)
169 2jmo_A Parkin; IBR, E3 ligase, 48.2 3.5 0.00012 28.2 -0.2 20 196-217 55-74 (80)
170 2eoj_A Zinc finger protein 268 48.1 5.9 0.0002 22.4 0.9 20 16-35 9-28 (44)
171 2ytf_A Zinc finger protein 268 48.0 7.2 0.00025 22.2 1.3 20 16-35 9-28 (46)
172 2eow_A Zinc finger protein 347 47.9 7.1 0.00024 22.2 1.2 19 16-34 9-27 (46)
173 2em6_A Zinc finger protein 224 47.8 7.6 0.00026 22.2 1.4 19 16-34 9-27 (46)
174 2eon_A ZFP-95, zinc finger pro 47.8 7.8 0.00027 22.2 1.4 20 16-35 9-28 (46)
175 2emg_A Zinc finger protein 484 47.8 7.6 0.00026 22.2 1.4 20 16-35 9-28 (46)
176 2enf_A Zinc finger protein 347 47.7 7.7 0.00026 22.1 1.4 20 16-35 9-28 (46)
177 2em3_A Zinc finger protein 28 47.6 7.5 0.00026 22.2 1.3 19 16-34 9-27 (46)
178 3kqi_A GRC5, PHD finger protei 47.5 5.4 0.00018 26.8 0.7 48 165-222 9-61 (75)
179 1sp2_A SP1F2; zinc finger, tra 47.4 7 0.00024 20.0 1.1 15 18-32 1-17 (31)
180 2epv_A Zinc finger protein 268 47.4 7.5 0.00026 22.0 1.3 19 16-34 9-27 (44)
181 1x4u_A Zinc finger, FYVE domai 47.3 9.9 0.00034 26.1 2.1 39 161-209 10-48 (84)
182 2enh_A Zinc finger protein 28 47.2 7.3 0.00025 22.3 1.2 21 16-36 9-29 (46)
183 1zbd_B Rabphilin-3A; G protein 47.1 11 0.00038 28.4 2.5 50 163-221 53-106 (134)
184 2epc_A Zinc finger protein 32; 47.1 7.5 0.00026 21.6 1.2 18 16-33 8-25 (42)
185 2dlq_A GLI-kruppel family memb 47.0 7 0.00024 27.4 1.3 24 13-36 1-24 (124)
186 2yrj_A Zinc finger protein 473 46.9 7.6 0.00026 22.1 1.3 20 16-35 9-28 (46)
187 2eox_A Zinc finger protein 473 46.7 6.6 0.00022 22.2 0.9 20 16-35 9-28 (44)
188 2en3_A ZFP-95, zinc finger pro 46.7 7.8 0.00027 22.1 1.3 19 16-34 9-27 (46)
189 1x5w_A Zinc finger protein 64, 46.5 7.7 0.00026 24.5 1.3 22 14-35 4-25 (70)
190 2yto_A Zinc finger protein 484 46.3 8 0.00027 22.1 1.3 19 16-34 9-27 (46)
191 2en2_A B-cell lymphoma 6 prote 46.3 7.8 0.00027 21.6 1.2 18 16-33 8-25 (42)
192 2eos_A B-cell lymphoma 6 prote 46.2 8.4 0.00029 21.5 1.4 19 16-34 8-26 (42)
193 3a1b_A DNA (cytosine-5)-methyl 46.1 16 0.00054 28.5 3.3 34 164-212 78-114 (159)
194 2ep2_A Zinc finger protein 484 46.1 8.1 0.00028 22.0 1.3 19 16-34 9-27 (46)
195 2emi_A Zinc finger protein 484 46.0 8.1 0.00028 22.0 1.3 20 16-35 9-28 (46)
196 2ep1_A Zinc finger protein 484 46.0 8.1 0.00028 22.0 1.3 20 16-35 9-28 (46)
197 1wen_A Inhibitor of growth fam 45.7 6.3 0.00021 26.4 0.8 26 197-224 37-67 (71)
198 2epx_A Zinc finger protein 28 45.6 8.7 0.0003 21.9 1.4 21 16-36 9-29 (47)
199 2eq1_A Zinc finger protein 347 45.6 7.6 0.00026 22.1 1.1 19 16-34 9-27 (46)
200 2ytp_A Zinc finger protein 484 45.5 8.2 0.00028 22.1 1.3 20 16-35 9-28 (46)
201 2eoh_A Zinc finger protein 28 45.5 8 0.00027 22.1 1.2 19 16-34 9-27 (46)
202 2eou_A Zinc finger protein 473 45.5 7.9 0.00027 21.9 1.2 18 16-33 9-26 (44)
203 2em7_A Zinc finger protein 224 45.3 8.4 0.00029 21.9 1.3 21 16-36 9-29 (46)
204 2em0_A Zinc finger protein 224 45.3 8.2 0.00028 22.0 1.2 20 16-35 9-28 (46)
205 2em4_A Zinc finger protein 28 45.3 8 0.00027 22.1 1.2 18 16-33 9-26 (46)
206 2emj_A Zinc finger protein 28 45.2 8.5 0.00029 22.0 1.3 19 16-34 9-27 (46)
207 2eq3_A Zinc finger protein 347 45.0 6.8 0.00023 22.3 0.8 20 16-35 9-28 (46)
208 2eme_A Zinc finger protein 473 44.9 8.6 0.00029 21.8 1.3 19 16-34 9-27 (46)
209 2ep3_A Zinc finger protein 484 44.7 8.7 0.0003 21.9 1.3 20 16-35 9-28 (46)
210 2eoy_A Zinc finger protein 473 44.6 8.5 0.00029 22.0 1.2 21 16-36 9-29 (46)
211 2epw_A Zinc finger protein 268 44.6 8.8 0.0003 21.8 1.3 20 16-35 9-28 (46)
212 2yth_A Zinc finger protein 224 44.5 8.8 0.0003 21.9 1.3 20 16-35 9-28 (46)
213 2eq2_A Zinc finger protein 347 44.5 8.5 0.00029 21.9 1.2 21 16-36 9-29 (46)
214 2eor_A Zinc finger protein 224 44.4 8.6 0.0003 21.8 1.2 18 16-33 9-26 (46)
215 2emk_A Zinc finger protein 28 44.4 9.2 0.00031 21.8 1.4 20 16-35 9-28 (46)
216 2ysm_A Myeloid/lymphoid or mix 44.4 4.8 0.00016 29.1 0.0 27 196-222 74-104 (111)
217 2ep0_A Zinc finger protein 28 44.3 8.9 0.00031 21.8 1.3 21 16-36 9-29 (46)
218 2yti_A Zinc finger protein 347 44.3 8.6 0.00029 21.9 1.2 20 16-35 9-28 (46)
219 2ema_A Zinc finger protein 347 44.3 8.6 0.0003 21.9 1.2 19 16-34 9-27 (46)
220 2en9_A Zinc finger protein 28 44.2 8.9 0.00031 21.9 1.3 18 16-33 9-26 (46)
221 2en7_A Zinc finger protein 268 44.2 8.3 0.00028 21.6 1.1 19 16-34 9-27 (44)
222 2el4_A Zinc finger protein 268 44.2 9 0.00031 21.8 1.3 20 16-35 9-28 (46)
223 2yrm_A B-cell lymphoma 6 prote 44.2 9.4 0.00032 21.5 1.4 18 16-33 7-24 (43)
224 2emz_A ZFP-95, zinc finger pro 44.1 8.9 0.0003 21.9 1.3 18 16-33 9-26 (46)
225 2epr_A POZ-, at HOOK-, and zin 44.0 7.4 0.00025 22.6 0.9 22 14-35 7-28 (48)
226 2em2_A Zinc finger protein 28 43.9 9.2 0.00031 21.8 1.3 19 16-34 9-27 (46)
227 2eov_A Zinc finger protein 484 43.8 9.8 0.00033 21.6 1.4 19 16-34 9-27 (46)
228 2ene_A Zinc finger protein 347 43.7 8.8 0.0003 21.9 1.2 19 16-34 9-27 (46)
229 2ytk_A Zinc finger protein 347 43.7 9.1 0.00031 21.8 1.3 18 16-33 9-26 (46)
230 1weu_A Inhibitor of growth fam 43.7 7.2 0.00025 27.5 0.9 26 197-224 57-87 (91)
231 2ely_A Zinc finger protein 224 43.7 9.8 0.00033 21.7 1.4 19 16-34 9-27 (46)
232 2epq_A POZ-, at HOOK-, and zin 43.7 7.9 0.00027 22.0 1.0 21 14-34 5-25 (45)
233 2emp_A Zinc finger protein 347 43.7 9.3 0.00032 21.8 1.3 19 16-34 9-27 (46)
234 2em5_A ZFP-95, zinc finger pro 43.6 9.1 0.00031 21.9 1.2 21 16-36 9-29 (46)
235 2eml_A Zinc finger protein 28 43.5 9.5 0.00032 21.7 1.3 19 16-34 9-27 (46)
236 1weo_A Cellulose synthase, cat 43.3 26 0.00088 24.7 3.7 53 164-224 15-69 (93)
237 2dar_A PDZ and LIM domain prot 43.3 11 0.00038 25.7 1.9 41 164-226 24-64 (90)
238 2eoq_A Zinc finger protein 224 43.3 9.2 0.00031 21.8 1.2 19 16-34 9-27 (46)
239 2eq0_A Zinc finger protein 347 43.1 9.2 0.00032 21.8 1.2 20 16-35 9-28 (46)
240 2eoo_A ZFP-95, zinc finger pro 43.0 9.5 0.00033 21.8 1.3 18 16-33 9-26 (46)
241 2epu_A Zinc finger protein 32; 42.9 8.3 0.00028 21.9 1.0 20 16-35 9-28 (45)
242 2en8_A Zinc finger protein 224 42.9 9.2 0.00031 21.7 1.2 19 16-34 9-27 (46)
243 3iuf_A Zinc finger protein UBI 42.8 7.6 0.00026 22.8 0.8 20 17-36 5-24 (48)
244 2emy_A Zinc finger protein 268 42.8 9.5 0.00032 21.7 1.2 19 16-34 9-27 (46)
245 3zyq_A Hepatocyte growth facto 42.8 11 0.00038 30.8 2.1 49 165-223 164-220 (226)
246 1nyp_A Pinch protein; LIM doma 42.7 11 0.00039 23.8 1.7 41 165-227 5-45 (66)
247 2yu8_A Zinc finger protein 347 42.7 9.6 0.00033 21.7 1.2 20 16-35 9-28 (46)
248 3c6w_A P28ING5, inhibitor of g 42.6 6.5 0.00022 25.3 0.5 23 197-221 30-57 (59)
249 2eop_A Zinc finger protein 268 42.5 10 0.00034 21.5 1.3 20 16-35 9-28 (46)
250 2emh_A Zinc finger protein 484 42.5 9.6 0.00033 21.7 1.2 19 16-34 9-27 (46)
251 2epz_A Zinc finger protein 28 42.5 10 0.00035 21.6 1.4 20 16-35 9-28 (46)
252 3mpx_A FYVE, rhogef and PH dom 42.4 5.3 0.00018 35.5 0.0 52 163-224 373-431 (434)
253 2eoz_A Zinc finger protein 473 42.3 8.6 0.00029 22.0 1.0 19 16-34 9-27 (46)
254 2el6_A Zinc finger protein 268 42.2 10 0.00034 21.6 1.3 20 16-35 9-28 (46)
255 2ytt_A Zinc finger protein 473 42.1 9.8 0.00033 21.7 1.2 19 16-34 9-27 (46)
256 1dvp_A HRS, hepatocyte growth 42.0 11 0.00037 30.6 1.8 37 164-210 160-196 (220)
257 2emf_A Zinc finger protein 484 42.0 9.9 0.00034 21.7 1.2 21 16-36 9-29 (46)
258 2em9_A Zinc finger protein 224 42.0 10 0.00035 21.5 1.3 20 16-35 9-28 (46)
259 2ytm_A Zinc finger protein 28 41.8 10 0.00035 21.7 1.3 18 16-33 9-26 (46)
260 2em8_A Zinc finger protein 224 41.7 11 0.00038 21.5 1.4 19 15-33 8-26 (46)
261 2eq4_A Zinc finger protein 224 41.7 10 0.00034 21.5 1.2 20 16-35 9-28 (46)
262 2ytr_A Zinc finger protein 347 41.5 10 0.00034 21.6 1.2 20 16-35 9-28 (46)
263 2ytj_A Zinc finger protein 484 41.5 11 0.00036 21.5 1.3 19 16-34 9-27 (46)
264 2emx_A Zinc finger protein 268 41.5 11 0.00036 21.2 1.3 19 16-34 7-25 (44)
265 2ytd_A Zinc finger protein 473 41.5 11 0.00036 21.5 1.3 18 16-33 9-26 (46)
266 1vd4_A Transcription initiatio 41.4 8.5 0.00029 24.0 0.9 16 16-31 11-26 (62)
267 1x64_A Alpha-actinin-2 associa 41.4 14 0.00046 25.2 2.1 42 164-227 24-65 (89)
268 2lce_A B-cell lymphoma 6 prote 41.3 11 0.00038 24.0 1.5 26 10-35 8-33 (74)
269 2eom_A ZFP-95, zinc finger pro 41.3 10 0.00035 21.7 1.2 19 16-34 9-27 (46)
270 2ytq_A Zinc finger protein 268 41.3 11 0.00038 21.4 1.4 19 16-34 9-27 (46)
271 2d8z_A Four and A half LIM dom 41.2 15 0.00052 23.5 2.2 40 165-226 5-44 (70)
272 1yui_A GAGA-factor; complex (D 41.1 10 0.00034 22.7 1.2 17 16-32 21-37 (54)
273 2elz_A Zinc finger protein 224 41.0 11 0.00038 21.5 1.3 19 16-34 9-27 (46)
274 2ytg_A ZFP-95, zinc finger pro 40.9 11 0.00036 21.5 1.3 21 16-36 9-29 (46)
275 2enc_A Zinc finger protein 224 40.9 11 0.00037 21.4 1.3 19 16-34 9-27 (46)
276 2emm_A ZFP-95, zinc finger pro 40.8 11 0.00037 21.4 1.3 19 16-34 9-27 (46)
277 2ytn_A Zinc finger protein 347 40.2 11 0.00038 21.4 1.3 20 16-35 9-28 (46)
278 2vnf_A ING 4, P29ING4, inhibit 39.9 7.2 0.00024 25.1 0.4 23 197-221 31-58 (60)
279 2g6q_A Inhibitor of growth pro 39.9 4.9 0.00017 26.2 -0.5 23 197-221 32-59 (62)
280 3o7a_A PHD finger protein 13 v 39.6 9.5 0.00032 23.6 0.9 30 192-221 19-51 (52)
281 2yso_A ZFP-95, zinc finger pro 39.4 11 0.00039 21.3 1.2 18 16-33 9-26 (46)
282 2zet_C Melanophilin; complex, 39.2 14 0.00046 28.6 1.9 48 164-221 67-116 (153)
283 1wfk_A Zinc finger, FYVE domai 39.2 17 0.00057 25.3 2.2 48 164-221 8-62 (88)
284 2ysp_A Zinc finger protein 224 39.0 10 0.00036 21.5 1.0 19 16-34 9-27 (46)
285 1wyh_A SLIM 2, skeletal muscle 38.9 14 0.00049 23.7 1.8 42 165-226 5-46 (72)
286 2a20_A Regulating synaptic mem 38.9 4.4 0.00015 26.4 -0.8 50 161-221 5-59 (62)
287 2jvx_A NF-kappa-B essential mo 38.8 4.7 0.00016 22.2 -0.6 14 213-226 3-16 (28)
288 1x63_A Skeletal muscle LIM-pro 38.2 16 0.00054 24.2 2.0 42 165-226 15-56 (82)
289 2eoe_A Zinc finger protein 347 38.2 10 0.00035 21.5 0.8 19 16-34 9-27 (46)
290 3uk3_C Zinc finger protein 217 38.2 9.7 0.00033 22.7 0.8 17 17-33 2-18 (57)
291 1x62_A C-terminal LIM domain p 38.0 9.2 0.00032 25.4 0.7 40 164-225 14-53 (79)
292 2en1_A Zinc finger protein 224 37.9 11 0.00037 21.4 1.0 20 16-35 9-28 (46)
293 2dj7_A Actin-binding LIM prote 37.9 15 0.0005 24.6 1.8 40 164-224 14-53 (80)
294 2rsd_A E3 SUMO-protein ligase 37.8 4.1 0.00014 26.9 -1.1 25 197-221 32-64 (68)
295 2d8x_A Protein pinch; LIM doma 37.7 12 0.00042 24.0 1.3 40 165-226 5-44 (70)
296 2eod_A TNF receptor-associated 37.6 12 0.0004 23.4 1.1 22 14-36 5-26 (66)
297 2en6_A Zinc finger protein 268 37.5 11 0.00037 21.4 0.9 18 16-33 9-26 (46)
298 1zfd_A SWI5; DNA binding motif 37.4 13 0.00043 19.1 1.1 15 18-32 2-18 (32)
299 1g47_A Pinch protein; LIM doma 37.2 18 0.0006 23.6 2.0 44 164-227 10-53 (77)
300 1x61_A Thyroid receptor intera 37.2 17 0.00058 23.4 1.9 41 165-225 5-45 (72)
301 1x4k_A Skeletal muscle LIM-pro 36.7 17 0.00057 23.4 1.8 42 165-226 5-46 (72)
302 2eps_A POZ-, at HOOK-, and zin 35.5 14 0.00049 22.0 1.3 19 15-33 8-26 (54)
303 2cs3_A Protein C14ORF4, MY039 35.0 24 0.00082 24.4 2.4 38 163-212 13-52 (93)
304 2o35_A Hypothetical protein DU 34.7 12 0.0004 27.0 0.8 11 201-211 43-53 (105)
305 3fyb_A Protein of unknown func 34.5 12 0.00041 26.9 0.8 11 201-211 42-52 (104)
306 2ab3_A ZNF29; zinc finger prot 33.8 13 0.00043 18.3 0.7 15 18-32 1-17 (29)
307 2d8y_A Eplin protein; LIM doma 33.6 29 0.00099 23.5 2.8 41 165-226 15-55 (91)
308 2drp_A Protein (tramtrack DNA- 33.6 16 0.00053 22.5 1.2 17 16-32 37-53 (66)
309 2d9h_A Zinc finger protein 692 33.3 17 0.00059 23.2 1.5 17 16-32 4-20 (78)
310 2jmi_A Protein YNG1, ING1 homo 33.2 8.8 0.0003 27.0 -0.1 21 199-221 50-75 (90)
311 2co8_A NEDD9 interacting prote 33.1 22 0.00075 23.8 2.0 41 164-225 14-54 (82)
312 1bbo_A Human enhancer-binding 32.0 15 0.00051 21.8 0.9 12 19-30 1-12 (57)
313 1f2i_G Fusion of N-terminal 17 31.5 17 0.00059 22.8 1.2 15 17-31 47-61 (73)
314 1a7i_A QCRP2 (LIM1); LIM domai 31.3 15 0.00052 24.3 0.9 41 165-226 7-47 (81)
315 2dmd_A Zinc finger protein 64, 31.2 18 0.00063 23.9 1.4 23 14-36 3-25 (96)
316 1v6g_A Actin binding LIM prote 30.9 16 0.00056 24.2 1.0 39 165-225 15-53 (81)
317 2adr_A ADR1; transcription reg 30.7 19 0.00064 21.6 1.2 18 16-33 27-44 (60)
318 2pv0_B DNA (cytosine-5)-methyl 30.4 27 0.00093 31.1 2.6 44 164-221 92-147 (386)
319 4bbq_A Lysine-specific demethy 30.1 13 0.00045 26.8 0.4 31 192-222 75-114 (117)
320 1wig_A KIAA1808 protein; LIM d 30.1 23 0.00077 23.1 1.6 38 165-224 5-42 (73)
321 1wd2_A Ariadne-1 protein homol 30.0 20 0.00068 23.1 1.3 18 209-226 1-19 (60)
322 2epp_A POZ-, at HOOK-, and zin 29.9 18 0.00061 23.5 1.1 24 15-38 9-32 (66)
323 1x6e_A Zinc finger protein 24; 29.2 21 0.0007 22.5 1.3 20 16-35 11-30 (72)
324 2lv2_A Insulinoma-associated p 29.1 21 0.00071 24.3 1.3 23 14-36 23-45 (85)
325 2cur_A Skeletal muscle LIM-pro 28.9 14 0.00049 23.6 0.4 39 165-225 5-43 (69)
326 3mjh_B Early endosome antigen 28.9 14 0.00049 21.2 0.4 19 17-35 3-21 (34)
327 3f6q_B LIM and senescent cell 28.8 25 0.00087 22.2 1.7 42 165-226 11-52 (72)
328 1loi_A Cyclic 3',5'-AMP specif 28.8 7.3 0.00025 20.4 -0.8 12 200-211 6-17 (26)
329 1va1_A Transcription factor SP 28.8 24 0.00083 18.8 1.4 17 16-32 5-23 (37)
330 2ct1_A Transcriptional repress 27.9 22 0.00075 22.7 1.2 21 16-36 12-32 (77)
331 2roo_A Neurotoxin MAGI-4; spid 27.3 7.2 0.00025 23.3 -1.1 16 203-218 18-33 (43)
332 2cuq_A Four and A half LIM dom 27.2 22 0.00075 23.4 1.2 40 165-226 15-54 (80)
333 2cor_A Pinch protein; LIM doma 27.2 25 0.00085 23.3 1.4 40 164-225 14-53 (79)
334 1zfo_A LAsp-1; LIM domain, zin 27.2 16 0.00055 20.1 0.4 29 165-206 3-31 (31)
335 1x4l_A Skeletal muscle LIM-pro 26.7 30 0.001 22.1 1.8 44 165-226 5-48 (72)
336 2pk7_A Uncharacterized protein 26.4 20 0.00069 23.8 0.8 20 207-226 2-21 (69)
337 1qdp_A Robustoxin; neurotoxin, 26.1 7.6 0.00026 23.1 -1.2 15 203-217 18-32 (42)
338 1x6a_A LIMK-2, LIM domain kina 26.0 25 0.00087 23.1 1.3 39 165-225 15-53 (81)
339 2jny_A Uncharacterized BCR; st 25.9 19 0.00065 23.9 0.6 21 206-226 3-23 (67)
340 2l3k_A Rhombotin-2, linker, LI 25.2 26 0.00089 25.3 1.3 10 167-176 10-19 (123)
341 1ncs_A Peptide M30F, transcrip 25.0 24 0.00081 20.3 0.9 18 16-33 15-34 (47)
342 2fiy_A Protein FDHE homolog; F 24.9 17 0.00058 31.4 0.3 52 163-222 180-231 (309)
343 2lcq_A Putative toxin VAPC6; P 24.8 25 0.00085 26.9 1.2 28 191-224 132-159 (165)
344 1x3h_A Leupaxin; paxillin fami 24.4 22 0.00075 23.4 0.7 41 165-227 15-55 (80)
345 6rxn_A Rubredoxin; electron tr 24.4 30 0.001 21.1 1.3 8 215-222 32-39 (46)
346 2egq_A FHL1 protein; LIM domai 24.3 36 0.0012 22.1 1.8 45 165-227 15-60 (77)
347 2kpi_A Uncharacterized protein 23.8 13 0.00045 23.7 -0.5 19 207-225 4-22 (56)
348 2cot_A Zinc finger protein 435 23.7 29 0.001 22.0 1.2 16 17-32 44-59 (77)
349 2dlo_A Thyroid receptor-intera 23.2 22 0.00075 23.5 0.6 39 165-225 15-53 (81)
350 2xjy_A Rhombotin-2; oncoprotei 23.2 39 0.0013 24.4 2.0 28 198-225 51-78 (131)
351 2ct7_A Ring finger protein 31; 22.8 13 0.00045 25.5 -0.7 28 192-219 43-73 (86)
352 1bhi_A CRE-BP1, ATF-2; CRE bin 22.4 35 0.0012 18.1 1.2 17 16-32 3-21 (38)
353 1yuz_A Nigerythrin; rubrythrin 22.1 28 0.00095 28.0 1.0 20 196-222 176-195 (202)
354 2cup_A Skeletal muscle LIM-pro 21.7 54 0.0019 22.3 2.4 27 198-226 53-79 (101)
355 1rut_X Flinc4, fusion protein 21.4 38 0.0013 26.4 1.7 28 198-225 54-81 (188)
356 1x68_A FHL5 protein; four-and- 20.9 45 0.0015 21.6 1.7 43 165-225 5-47 (76)
357 3kv5_D JMJC domain-containing 20.6 26 0.00089 32.1 0.6 47 165-221 36-87 (488)
358 1x3c_A Zinc finger protein 292 20.6 39 0.0013 22.8 1.4 24 12-35 20-45 (73)
No 1
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=99.71 E-value=7.8e-18 Score=122.98 Aligned_cols=78 Identities=27% Similarity=0.583 Sum_probs=65.7
Q ss_pred hccccccHHHHHhccccccchhhhhhhhcccCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhcc
Q 042810 133 SERKEASRFVVEMLSRKQRRVLDLDFNKLVKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEE 212 (230)
Q Consensus 133 ~~~~~~s~~~i~~l~~~~~~~~~~~~~~~~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~ 212 (230)
...++++++.++.|+...+... ......+..|+||++.|.. ++.++.+||+|.||..||.+|++.
T Consensus 12 ~~~~~~s~~~i~~lp~~~~~~~----~~~~~~~~~C~IC~~~~~~-----------~~~~~~l~C~H~Fh~~Ci~~wl~~ 76 (91)
T 2l0b_A 12 VANPPASKESIDALPEILVTED----HGAVGQEMCCPICCSEYVK-----------GDVATELPCHHYFHKPCVSIWLQK 76 (91)
T ss_dssp SCCCCCCHHHHHTSCEEECCTT----CSSSSSCSEETTTTEECCT-----------TCEEEEETTTEEEEHHHHHHHHTT
T ss_pred cCCCCCCHHHHHhCCCeeeccc----ccccCCCCCCcccChhhcC-----------CCcEEecCCCChHHHHHHHHHHHc
Confidence 3457899999999998877431 1234567889999999977 778899999999999999999999
Q ss_pred CCcccccccCccc
Q 042810 213 QNSCPMCRRQIQY 225 (230)
Q Consensus 213 ~~tCP~CR~~i~~ 225 (230)
+.+||+||+.+..
T Consensus 77 ~~~CP~Cr~~~~~ 89 (91)
T 2l0b_A 77 SGTCPVCRCMFPP 89 (91)
T ss_dssp TCBCTTTCCBSSC
T ss_pred CCcCcCcCccCCC
Confidence 9999999998864
No 2
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.65 E-value=1.1e-17 Score=117.48 Aligned_cols=68 Identities=28% Similarity=0.684 Sum_probs=54.6
Q ss_pred HHhccccccchhhhhhhhcccCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccC
Q 042810 143 VEMLSRKQRRVLDLDFNKLVKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQ 222 (230)
Q Consensus 143 i~~l~~~~~~~~~~~~~~~~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~ 222 (230)
++.++..++.. .....++..|+||++.+.. ++.++.+||+|.||..||.+|++.+.+||+||++
T Consensus 6 i~~lp~~~~~~-----~~~~~~~~~C~IC~~~~~~-----------~~~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~ 69 (75)
T 1x4j_A 6 SGQLPSYRFNP-----NNHQSEQTLCVVCMCDFES-----------RQLLRVLPCNHEFHAKCVDKWLKANRTCPICRAD 69 (75)
T ss_dssp CSSCCCEEBCS-----SSCSSSCCEETTTTEECCB-----------TCEEEEETTTEEEETTHHHHHHHHCSSCTTTCCC
T ss_pred HhhCCcEEecC-----ccccCCCCCCeECCcccCC-----------CCeEEEECCCCHhHHHHHHHHHHcCCcCcCcCCc
Confidence 34556555521 2334567899999999977 7778999999999999999999999999999999
Q ss_pred cccc
Q 042810 223 IQYE 226 (230)
Q Consensus 223 i~~~ 226 (230)
+...
T Consensus 70 ~~~~ 73 (75)
T 1x4j_A 70 SGPS 73 (75)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8764
No 3
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=9.1e-17 Score=114.91 Aligned_cols=67 Identities=22% Similarity=0.602 Sum_probs=49.8
Q ss_pred cccCCCccccCchhhhhhhhhhccccccCceeEEeC-CCCccchhhHHHhhccCCcccccccCccccC
Q 042810 161 LVKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMP-CHHIFHASCISRWLEEQNSCPMCRRQIQYED 227 (230)
Q Consensus 161 ~~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~Lp-C~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~~ 227 (230)
.+.+++.|+||++.|.+...+.......++.++.++ |+|.||.+||.+|++++++||+||+++..++
T Consensus 11 ~~~~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~~~~~ 78 (81)
T 2ecl_A 11 WDVECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQR 78 (81)
T ss_dssp CSCCCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTCCBCTTTCCBCCEEE
T ss_pred ecCCCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhCCCCCCcCCCcchhh
Confidence 344578899999999663222222222245566665 9999999999999999999999999987665
No 4
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=99.61 E-value=3.2e-16 Score=103.30 Aligned_cols=51 Identities=41% Similarity=0.957 Sum_probs=45.7
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEeC-CCCccchhhHHHhhccCCcccccccCcc
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMP-CHHIFHASCISRWLEEQNSCPMCRRQIQ 224 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~Lp-C~H~FH~~CI~~Wl~~~~tCP~CR~~i~ 224 (230)
+++..|+||++.+.. ++.+..+| |||.||..||.+|++++.+||+||+++.
T Consensus 3 ~~~~~C~IC~~~~~~-----------~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~~~~ 54 (55)
T 1iym_A 3 DDGVECAVCLAELED-----------GEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVV 54 (55)
T ss_dssp CCSCCCTTTCCCCCT-----------TSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCSC
T ss_pred CCCCcCccCCccccC-----------CCceEECCCCCCcccHHHHHHHHHcCCcCcCCCCEeE
Confidence 346789999999977 77788898 9999999999999999999999999874
No 5
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.60 E-value=4.3e-16 Score=109.99 Aligned_cols=57 Identities=39% Similarity=0.964 Sum_probs=50.5
Q ss_pred ccCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCccccCCC
Q 042810 162 VKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYEDLV 229 (230)
Q Consensus 162 ~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~~l~ 229 (230)
...+..|+||++.|.. ...++.+||+|.||..||.+|++.+.+||+||+++..+++.
T Consensus 12 ~~~~~~C~IC~~~~~~-----------~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~ 68 (78)
T 2ect_A 12 VGSGLECPVCKEDYAL-----------GESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTGQNTA 68 (78)
T ss_dssp SSSSCCCTTTTSCCCT-----------TSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCCCSCSC
T ss_pred CCCCCCCeeCCccccC-----------CCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccCCcccC
Confidence 3457899999999977 66788899999999999999999999999999999887764
No 6
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=99.59 E-value=5.2e-16 Score=107.03 Aligned_cols=55 Identities=31% Similarity=0.873 Sum_probs=48.1
Q ss_pred cccCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCcccc
Q 042810 161 LVKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYE 226 (230)
Q Consensus 161 ~~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~ 226 (230)
....+..|+||++.+.. +..++.+||||.||..||.+|++++.+||+||+.+...
T Consensus 10 ~~~~~~~C~IC~~~~~~-----------~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 64 (69)
T 2kiz_A 10 EEDTEEKCTICLSILEE-----------GEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIEAQ 64 (69)
T ss_dssp STTCCCSBTTTTBCCCS-----------SSCEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSCSC
T ss_pred cCCCCCCCeeCCccccC-----------CCcEEEeCCCCHHHHHHHHHHHHcCCCCcCcCccccCc
Confidence 34457889999999866 67788999999999999999999999999999988654
No 7
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=1e-15 Score=106.95 Aligned_cols=55 Identities=35% Similarity=0.855 Sum_probs=48.0
Q ss_pred cccCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCcccc
Q 042810 161 LVKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYE 226 (230)
Q Consensus 161 ~~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~ 226 (230)
....+..|+||++.+.. ...+..+||+|.||..||.+|++.+.+||+||+++..-
T Consensus 11 ~~~~~~~C~IC~~~~~~-----------~~~~~~~~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~~~ 65 (74)
T 2ep4_A 11 ELNLHELCAVCLEDFKP-----------RDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQL 65 (74)
T ss_dssp CCCCSCBCSSSCCBCCS-----------SSCEEEETTTEEEEHHHHHHHHHHCSBCTTTCCBCSSC
T ss_pred cCCCCCCCcCCCcccCC-----------CCcEEEcCCCCEecHHHHHHHHHcCCcCCCcCcccccc
Confidence 34457899999999977 67788899999999999999999999999999988653
No 8
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=99.54 E-value=2.8e-15 Score=103.65 Aligned_cols=60 Identities=22% Similarity=0.650 Sum_probs=49.5
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCccccCCC
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYEDLV 229 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~~l~ 229 (230)
+++..|+||++.+.... ..++.++.++|||.||..||.+|++.+.+||+||+++..+++.
T Consensus 8 ~~~~~C~IC~~~~~~~~-------~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~ 67 (71)
T 3ng2_A 8 SGTVSCPICMDGYSEIV-------QNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYH 67 (71)
T ss_dssp TTCCBCTTTCCBHHHHH-------TTTCCEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCCCSCC
T ss_pred CCCCCCcccChhhhccc-------cccCCeEeCCCCChHhHHHHHHHHHcCCCCCCCCCccChhhee
Confidence 45778999999997621 0134567889999999999999999999999999999888764
No 9
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=99.52 E-value=4.8e-15 Score=97.47 Aligned_cols=51 Identities=27% Similarity=0.802 Sum_probs=44.1
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCcc
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQ 224 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~ 224 (230)
.+..|+||++.+... +..++.++|+|.||..||.+|++.+.+||+||+++.
T Consensus 4 ~~~~C~IC~~~~~~~----------~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 54 (55)
T 2ecm_A 4 GSSGCPICLEDIHTS----------RVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCSGPSS 54 (55)
T ss_dssp CCCSCTTTCCCCCTT----------TSCEEECTTSCEEETTHHHHHHHHTCCCTTSCCSSC
T ss_pred CCCcCcccChhhcCC----------CcCeEecCCCCcccHHHHHHHHHcCCcCCCCCCcCC
Confidence 467899999998551 445788899999999999999999999999999875
No 10
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=99.52 E-value=3.7e-15 Score=112.00 Aligned_cols=67 Identities=28% Similarity=0.595 Sum_probs=49.3
Q ss_pred cccCCCccccCchhhhhhhhhhc----cccccCceeEEeCCCCccchhhHHHhhccCCcccccccCccccC
Q 042810 161 LVKAGDNCAVCLEELIAKEEIKG----QTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYED 227 (230)
Q Consensus 161 ~~~~~~~C~ICle~~~~~~~~~~----~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~~ 227 (230)
.+.+++.|+||++.|...+.+.. .....+..++.++|+|.||..||.+||+++.+||+||+++..++
T Consensus 33 ~d~~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~Cr~~~~~~~ 103 (106)
T 3dpl_R 33 WDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQK 103 (106)
T ss_dssp ESSCSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSBCCEEE
T ss_pred cCCCCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcCCcCcCCCCcceeec
Confidence 34568899999999976322111 01112345777899999999999999999999999999976543
No 11
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=99.51 E-value=5.8e-15 Score=99.79 Aligned_cols=59 Identities=24% Similarity=0.657 Sum_probs=48.5
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCccccCCC
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYEDLV 229 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~~l~ 229 (230)
++..|+||++.+....+ .++.+..++|||.||..||.+|++++.+||+||+++..+++.
T Consensus 2 ~~~~C~IC~~~~~~~~~-------~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~ 60 (64)
T 2xeu_A 2 AMVSCPICMDGYSEIVQ-------NGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYH 60 (64)
T ss_dssp CCCBCTTTCCBHHHHHH-------TTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCTTTCEE
T ss_pred CCCCCCccChhhhCccc-------cCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCCcccee
Confidence 35689999999976211 134568889999999999999999999999999999887753
No 12
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=6.3e-15 Score=101.05 Aligned_cols=58 Identities=22% Similarity=0.655 Sum_probs=46.9
Q ss_pred cccCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCccc
Q 042810 161 LVKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQY 225 (230)
Q Consensus 161 ~~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~ 225 (230)
...++..|+||++.+.... ..+..++.++|||.||..||..|++.+.+||+||+++..
T Consensus 11 ~~~~~~~C~IC~~~~~~~~-------~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 68 (69)
T 2ea6_A 11 RPSGTVSCPICMDGYSEIV-------QNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 68 (69)
T ss_dssp CTTCCCCCTTTCCCHHHHT-------TTTCCEEECSSSCEEEHHHHHHHHHHCSSCTTTCCCCCC
T ss_pred CCCCCCCCcccCccccccc-------cccCCeEeCCCCChhcHHHHHHHHHcCCCCCCCCCccCc
Confidence 3455788999999997621 013445788999999999999999999999999999865
No 13
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=5.2e-15 Score=102.74 Aligned_cols=53 Identities=26% Similarity=0.632 Sum_probs=46.4
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCccccCCC
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYEDLV 229 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~~l~ 229 (230)
.++..|+||++.+.. .+.+||||.||..||..|+..+.+||+||..+..+++.
T Consensus 13 ~~~~~C~IC~~~~~~--------------~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~~ 65 (71)
T 2d8t_A 13 LTVPECAICLQTCVH--------------PVSLPCKHVFCYLCVKGASWLGKRCALCRQEIPEDFLD 65 (71)
T ss_dssp SSCCBCSSSSSBCSS--------------EEEETTTEEEEHHHHHHCTTCSSBCSSSCCBCCHHHHS
T ss_pred CCCCCCccCCcccCC--------------CEEccCCCHHHHHHHHHHHHCCCcCcCcCchhCHhhcc
Confidence 456789999999865 67889999999999999999999999999999876553
No 14
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=1.4e-14 Score=100.79 Aligned_cols=54 Identities=30% Similarity=0.576 Sum_probs=46.8
Q ss_pred ccCCCccccCchhhhhhhhhhccccccCceeEEe-CCCCccchhhHHHhhccCCcccccccCccccCCC
Q 042810 162 VKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITM-PCHHIFHASCISRWLEEQNSCPMCRRQIQYEDLV 229 (230)
Q Consensus 162 ~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~L-pC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~~l~ 229 (230)
.+++..|+||++.+.+ ++.+ +|||.||..||..|++.+.+||+||+.+..++++
T Consensus 12 ~~~~~~C~IC~~~~~~--------------p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~~ 66 (72)
T 2djb_A 12 LTPYILCSICKGYLID--------------ATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPL 66 (72)
T ss_dssp CCGGGSCTTTSSCCSS--------------CEECSSSCCEECHHHHHHHHHHCSSCTTTCCCCCSSCSC
T ss_pred cCCCCCCCCCChHHHC--------------cCEECCCCCHHHHHHHHHHHHcCCcCCCcCcccCccccc
Confidence 3446789999999855 5565 8999999999999999999999999999988875
No 15
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=99.46 E-value=4.4e-15 Score=113.36 Aligned_cols=68 Identities=28% Similarity=0.581 Sum_probs=3.4
Q ss_pred hcccCCCccccCchhhhhhhhhhccc----cccCceeEEeCCCCccchhhHHHhhccCCcccccccCccccC
Q 042810 160 KLVKAGDNCAVCLEELIAKEEIKGQT----TEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYED 227 (230)
Q Consensus 160 ~~~~~~~~C~ICle~~~~~~~~~~~~----~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~~ 227 (230)
..+..++.|+||++.|...+...... ......+..++|+|.||..||.+||+++++||+||+++..++
T Consensus 43 ~wd~~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~~~~~k 114 (117)
T 4a0k_B 43 AWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQK 114 (117)
T ss_dssp EECCCC------------------------------------------------------------------
T ss_pred eecCCCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCeeeeec
Confidence 44556889999999997743221110 111234455689999999999999999999999999976554
No 16
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=99.46 E-value=3.3e-14 Score=107.30 Aligned_cols=63 Identities=19% Similarity=0.456 Sum_probs=43.8
Q ss_pred CCCccccCchhhhhhhhhhcc---c-cccCceeEEeCCCCccchhhHHHhh-----ccCCcccccccCcccc
Q 042810 164 AGDNCAVCLEELIAKEEIKGQ---T-TEKKTQLITMPCHHIFHASCISRWL-----EEQNSCPMCRRQIQYE 226 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~---~-~~~~~~v~~LpC~H~FH~~CI~~Wl-----~~~~tCP~CR~~i~~~ 226 (230)
.++.|+||++.|...+..... . ......++.++|+|.||..||.+|+ +.+.+||+||+.+..+
T Consensus 24 ~~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~ 95 (114)
T 1v87_A 24 PEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp CSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSC
T ss_pred CCCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccCCC
Confidence 356899999999662210000 0 0112344578899999999999999 4577999999987543
No 17
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=2.1e-14 Score=98.21 Aligned_cols=54 Identities=24% Similarity=0.517 Sum_probs=46.0
Q ss_pred ccCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhc-cCCcccccccCccccCCC
Q 042810 162 VKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLE-EQNSCPMCRRQIQYEDLV 229 (230)
Q Consensus 162 ~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~-~~~tCP~CR~~i~~~~l~ 229 (230)
..++..|+||++.+.. ++.++|||.||..||.+|++ .+.+||+||+++..++++
T Consensus 12 ~~~~~~C~IC~~~~~~--------------p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~if 66 (66)
T 2ecy_A 12 VEDKYKCEKCHLVLCS--------------PKQTECGHRFCESCMAALLSSSSPKCTACQESIVKDKVF 66 (66)
T ss_dssp CCCCEECTTTCCEESS--------------CCCCSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCTTTCC
T ss_pred CCcCCCCCCCChHhcC--------------eeECCCCCHHHHHHHHHHHHhCcCCCCCCCcCCChhhcC
Confidence 3457789999999865 45589999999999999995 567899999999998875
No 18
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=5.4e-14 Score=97.65 Aligned_cols=54 Identities=26% Similarity=0.626 Sum_probs=46.0
Q ss_pred cccCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhc---cCCcccccccCccccCC
Q 042810 161 LVKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLE---EQNSCPMCRRQIQYEDL 228 (230)
Q Consensus 161 ~~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~---~~~tCP~CR~~i~~~~l 228 (230)
...++..|+||++.+.. ++.++|||.||..||..|++ .+.+||+||+++..+++
T Consensus 16 ~~~~~~~C~IC~~~~~~--------------~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~~ 72 (73)
T 2ysl_A 16 KLQEEVICPICLDILQK--------------PVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNAI 72 (73)
T ss_dssp CCCCCCBCTTTCSBCSS--------------EEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCCCCC
T ss_pred hCccCCEeccCCcccCC--------------eEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCcccC
Confidence 34557899999999865 77789999999999999997 45689999999988775
No 19
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=99.43 E-value=4.2e-14 Score=96.96 Aligned_cols=49 Identities=31% Similarity=0.964 Sum_probs=42.5
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCccc
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQY 225 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~ 225 (230)
.+..|+||++.+.. .++.+||||.||..|+.+|++++.+||+||+++..
T Consensus 4 ~~~~C~IC~~~~~~-------------~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 52 (68)
T 1chc_A 4 VAERCPICLEDPSN-------------YSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVES 52 (68)
T ss_dssp CCCCCSSCCSCCCS-------------CEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCCC
T ss_pred CCCCCeeCCccccC-------------CcEecCCCCeeHHHHHHHHHhCcCcCcCCChhhHh
Confidence 46789999998733 35788999999999999999999999999998753
No 20
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=4.4e-14 Score=97.51 Aligned_cols=51 Identities=27% Similarity=0.924 Sum_probs=44.4
Q ss_pred ccCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCccccC
Q 042810 162 VKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYED 227 (230)
Q Consensus 162 ~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~~ 227 (230)
..++..|+||++.+ .+ +.+||+|.||..||.+|++++.+||+||+++...+
T Consensus 12 ~~~~~~C~IC~~~~-------------~~--~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 62 (70)
T 2ecn_A 12 LTDEEECCICMDGR-------------AD--LILPCAHSFCQKCIDKWSDRHRNCPICRLQMTGAN 62 (70)
T ss_dssp CCCCCCCSSSCCSC-------------CS--EEETTTEEECHHHHHHSSCCCSSCHHHHHCTTCCC
T ss_pred CCCCCCCeeCCcCc-------------cC--cccCCCCcccHHHHHHHHHCcCcCCCcCCcccCCC
Confidence 34578999999986 33 67899999999999999999999999999997665
No 21
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.40 E-value=1.3e-13 Score=99.03 Aligned_cols=57 Identities=19% Similarity=0.589 Sum_probs=47.3
Q ss_pred cccCCCccccCchhhhhhhhhhccccccCc-eeEEeCCCCccchhhHHHhhccC---CcccccccCccccCC
Q 042810 161 LVKAGDNCAVCLEELIAKEEIKGQTTEKKT-QLITMPCHHIFHASCISRWLEEQ---NSCPMCRRQIQYEDL 228 (230)
Q Consensus 161 ~~~~~~~C~ICle~~~~~~~~~~~~~~~~~-~v~~LpC~H~FH~~CI~~Wl~~~---~tCP~CR~~i~~~~l 228 (230)
...++..|+||++.|.. .+ .++.++|||.||..||..|++.+ .+||+||+.+..+++
T Consensus 11 ~~~~~~~C~IC~~~~~~-----------~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~i 71 (88)
T 2ct2_A 11 ALREVLECPICMESFTE-----------EQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRITSL 71 (88)
T ss_dssp CCCSCCBCTTTCCBCCT-----------TSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCCSST
T ss_pred hccCCCCCccCCccccc-----------cCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccchhH
Confidence 34457789999999866 33 37788999999999999999876 799999999877654
No 22
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=99.40 E-value=7.5e-14 Score=109.19 Aligned_cols=49 Identities=33% Similarity=0.899 Sum_probs=43.6
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCcccc
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYE 226 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~ 226 (230)
++..|+||++.|.+ ++.+||||.||..||..|+..+.+||+||+++...
T Consensus 52 ~~~~C~iC~~~~~~--------------~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 100 (138)
T 4ayc_A 52 NELQCIICSEYFIE--------------AVTLNCAHSFCSYCINEWMKRKIECPICRKDIKSK 100 (138)
T ss_dssp HHSBCTTTCSBCSS--------------EEEETTSCEEEHHHHHHHTTTCSBCTTTCCBCCCE
T ss_pred ccCCCcccCcccCC--------------ceECCCCCCccHHHHHHHHHcCCcCCCCCCcCCCC
Confidence 35689999999866 78899999999999999999999999999998653
No 23
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=99.39 E-value=1e-13 Score=97.01 Aligned_cols=52 Identities=23% Similarity=0.599 Sum_probs=43.8
Q ss_pred ccCCCccccCchhhhhhhhhhccccccCceeEEeC-CCCccchhhHHHhhccC--CcccccccCccccC
Q 042810 162 VKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMP-CHHIFHASCISRWLEEQ--NSCPMCRRQIQYED 227 (230)
Q Consensus 162 ~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~Lp-C~H~FH~~CI~~Wl~~~--~tCP~CR~~i~~~~ 227 (230)
..++..|+||++.|.+ ++.+| |||.||..||..|++.+ .+||+||+++...+
T Consensus 12 ~~~~~~C~IC~~~~~~--------------p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~ 66 (74)
T 2yur_A 12 IPDELLCLICKDIMTD--------------AVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPD 66 (74)
T ss_dssp SCGGGSCSSSCCCCTT--------------CEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSCCTT
T ss_pred CCCCCCCcCCChHHhC--------------CeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCCCcc
Confidence 3446789999999866 77799 99999999999999865 68999999865544
No 24
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=99.38 E-value=1.6e-13 Score=96.63 Aligned_cols=53 Identities=19% Similarity=0.464 Sum_probs=46.3
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhcc-CCcccccccCccccCCC
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEE-QNSCPMCRRQIQYEDLV 229 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~-~~tCP~CR~~i~~~~l~ 229 (230)
.++..|+||++.|.+ ++.++|||.||..||.+|++. +.+||+||+++..++++
T Consensus 6 ~~~~~C~IC~~~~~~--------------Pv~~~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~~~~l~ 59 (78)
T 1t1h_A 6 PEYFRCPISLELMKD--------------PVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLT 59 (78)
T ss_dssp SSSSSCTTTSCCCSS--------------EEEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSSCCCE
T ss_pred cccCCCCCccccccC--------------CEEcCCCCeecHHHHHHHHHHCcCCCCCCcCCCChhhCc
Confidence 457789999999866 778899999999999999987 78999999999877653
No 25
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=1.8e-13 Score=97.20 Aligned_cols=49 Identities=18% Similarity=0.491 Sum_probs=43.3
Q ss_pred ccCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCcc
Q 042810 162 VKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQ 224 (230)
Q Consensus 162 ~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~ 224 (230)
......|+||++.+.. ++.+||||.||..||.+|++...+||+||+.+.
T Consensus 12 ~~~~~~C~IC~~~~~~--------------p~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 12 EEIPFRCFICRQAFQN--------------PVVTKCRHYFCESCALEHFRATPRCYICDQPTG 60 (81)
T ss_dssp CCCCSBCSSSCSBCCS--------------EEECTTSCEEEHHHHHHHHHHCSBCSSSCCBCC
T ss_pred CCCCCCCcCCCchhcC--------------eeEccCCCHhHHHHHHHHHHCCCcCCCcCcccc
Confidence 3456789999999855 667999999999999999999999999999885
No 26
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=99.37 E-value=6.8e-14 Score=103.61 Aligned_cols=53 Identities=38% Similarity=0.770 Sum_probs=45.8
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEE-eCCCCccchhhHHHhhccC-CcccccccCccccCCC
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLIT-MPCHHIFHASCISRWLEEQ-NSCPMCRRQIQYEDLV 229 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~-LpC~H~FH~~CI~~Wl~~~-~tCP~CR~~i~~~~l~ 229 (230)
.++..|+||++.+.. ++. ++|||.||..||.+|++.+ .+||+||.++..++++
T Consensus 20 ~~~~~C~IC~~~~~~--------------p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~~l~ 74 (100)
T 3lrq_A 20 AEVFRCFICMEKLRD--------------ARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELV 74 (100)
T ss_dssp HHHTBCTTTCSBCSS--------------EEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCE
T ss_pred CCCCCCccCCccccC--------------ccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCCHHHhH
Confidence 346789999999865 666 8999999999999999987 6999999999887763
No 27
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=99.36 E-value=8.5e-14 Score=98.03 Aligned_cols=54 Identities=31% Similarity=0.695 Sum_probs=45.6
Q ss_pred cccCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhcc-------CCcccccccCccccCC
Q 042810 161 LVKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEE-------QNSCPMCRRQIQYEDL 228 (230)
Q Consensus 161 ~~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~-------~~tCP~CR~~i~~~~l 228 (230)
...++..|+||++.+.. ++.+||||.||..||..|++. ..+||+||..+..+++
T Consensus 8 ~~~~~~~C~IC~~~~~~--------------p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~~~l 68 (79)
T 2egp_A 8 NVQEEVTCPICLELLTE--------------PLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHL 68 (79)
T ss_dssp CCCCCCEETTTTEECSS--------------CCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCSSGG
T ss_pred hcccCCCCcCCCcccCC--------------eeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCHhhC
Confidence 34557899999999855 566899999999999999986 5689999999987655
No 28
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=1.8e-13 Score=97.64 Aligned_cols=54 Identities=28% Similarity=0.776 Sum_probs=43.9
Q ss_pred ccCCCccccCchhhhhhhhhhccccccCceeEEeCCC-----CccchhhHHHhhccC--CcccccccCccccC
Q 042810 162 VKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCH-----HIFHASCISRWLEEQ--NSCPMCRRQIQYED 227 (230)
Q Consensus 162 ~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~-----H~FH~~CI~~Wl~~~--~tCP~CR~~i~~~~ 227 (230)
..++..|.||++++.+ ++.+ .+||+ |.||..||++|+..+ .+||+||.++..+.
T Consensus 12 ~~~~~~C~IC~~~~~~-----------~~~l-~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~~~~ 72 (80)
T 2d8s_A 12 PSSQDICRICHCEGDD-----------ESPL-ITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIMET 72 (80)
T ss_dssp CTTSCCCSSSCCCCCS-----------SSCE-ECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCCCCC
T ss_pred CCCCCCCeEcCccccC-----------CCee-EeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeeecCc
Confidence 3456789999999865 4444 58996 999999999999876 49999999987654
No 29
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.35 E-value=3.5e-13 Score=95.76 Aligned_cols=53 Identities=32% Similarity=0.769 Sum_probs=45.7
Q ss_pred ccCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhcc------CCcccccccCccccCC
Q 042810 162 VKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEE------QNSCPMCRRQIQYEDL 228 (230)
Q Consensus 162 ~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~------~~tCP~CR~~i~~~~l 228 (230)
..++..|+||++.+.. ++.+||||.||..||..|+.. ..+||+||..+..+++
T Consensus 16 ~~~~~~C~IC~~~~~~--------------p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~ 74 (85)
T 2ecw_A 16 IKEEVTCPICLELLKE--------------PVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPFGNL 74 (85)
T ss_dssp CCTTTSCTTTCSCCSS--------------CEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCTTCC
T ss_pred CccCCCCcCCChhhCc--------------ceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCHHhC
Confidence 3457799999999865 567999999999999999987 6789999999987765
No 30
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.34 E-value=4.8e-13 Score=102.62 Aligned_cols=59 Identities=22% Similarity=0.672 Sum_probs=48.1
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCccccCC
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYEDL 228 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~~l 228 (230)
.++..|+||++.|.+.. ..+..++.++|||.||..||.+|++.+.+||+||+.+..+++
T Consensus 5 ~~~~~C~IC~~~~~~~~-------~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~l 63 (133)
T 4ap4_A 5 SGTVSCPICMDGYSEIV-------QNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRY 63 (133)
T ss_dssp CCSCBCTTTCCBHHHHH-------HTTCCEEEETTCCEEEHHHHHHHHTTCSBCTTTCCBCTTTCE
T ss_pred CCCCCCcccChhhhCcc-------ccccCeEecCCCChhhHHHHHHHHHhCCCCCCCCCcCccccc
Confidence 34678999999997610 013445889999999999999999999999999999987654
No 31
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.34 E-value=3.3e-13 Score=95.91 Aligned_cols=54 Identities=33% Similarity=0.740 Sum_probs=46.1
Q ss_pred ccCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhcc------CCcccccccCccccCCC
Q 042810 162 VKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEE------QNSCPMCRRQIQYEDLV 229 (230)
Q Consensus 162 ~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~------~~tCP~CR~~i~~~~l~ 229 (230)
..++..|+||++.+.. ++.+||||.||..|+..|+.. ..+||+||..+..+++.
T Consensus 16 ~~~~~~C~IC~~~~~~--------------p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~~ 75 (85)
T 2ecv_A 16 VKEEVTCPICLELLTQ--------------PLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIR 75 (85)
T ss_dssp CCCCCCCTTTCSCCSS--------------CBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCSSSCC
T ss_pred ccCCCCCCCCCcccCC--------------ceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCHHhcC
Confidence 4457899999999855 566899999999999999987 77999999999877653
No 32
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=99.33 E-value=3.1e-13 Score=99.57 Aligned_cols=51 Identities=25% Similarity=0.651 Sum_probs=44.5
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEe-CCCCccchhhHHHhhccCCcccccccCccccCC
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITM-PCHHIFHASCISRWLEEQNSCPMCRRQIQYEDL 228 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~L-pC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~~l 228 (230)
++..|+||++.+.+ ++.+ +|||.||..||..|+..+.+||+||..+..+++
T Consensus 21 ~~~~C~IC~~~~~~--------------p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~l 72 (99)
T 2y43_A 21 DLLRCGICFEYFNI--------------AMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTEPDL 72 (99)
T ss_dssp HHTBCTTTCSBCSS--------------EEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCGGGC
T ss_pred CCCCcccCChhhCC--------------cCEECCCCCHhhHHHHHHHHHCCCCCCCCCCcCChhhC
Confidence 45789999999855 6666 899999999999999999999999999987654
No 33
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.29 E-value=1.7e-12 Score=88.22 Aligned_cols=55 Identities=18% Similarity=0.517 Sum_probs=43.1
Q ss_pred CCccccCch-hhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhcc-CCcccccccCccccCCC
Q 042810 165 GDNCAVCLE-ELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEE-QNSCPMCRRQIQYEDLV 229 (230)
Q Consensus 165 ~~~C~ICle-~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~-~~tCP~CR~~i~~~~l~ 229 (230)
+..|+||++ .+... ......++|||.||..||.+|+.+ +.+||+||+.+..+++.
T Consensus 3 ~~~C~IC~~~~~~~~----------~~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~ 59 (65)
T 1g25_A 3 DQGCPRCKTTKYRNP----------SLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNFR 59 (65)
T ss_dssp TTCCSTTTTHHHHCS----------SCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSSCCCE
T ss_pred CCcCCcCCCCccCCC----------ccCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCccccccce
Confidence 568999999 66550 222356799999999999999764 46899999999887763
No 34
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.28 E-value=9.1e-13 Score=101.03 Aligned_cols=60 Identities=22% Similarity=0.650 Sum_probs=49.0
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCccccCCC
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYEDLV 229 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~~l~ 229 (230)
++...|+||++.+....+ .+..++.++|||.||..||.+|++.+.+||+||+++..++++
T Consensus 70 ~~~~~C~iC~~~~~~~~~-------~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~ 129 (133)
T 4ap4_A 70 SGTVSCPICMDGYSEIVQ-------NGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYH 129 (133)
T ss_dssp SSSCBCTTTCCBHHHHHH-------TTCCEEEETTSBEEEHHHHHHHHHHCSBCTTTCCBCCGGGEE
T ss_pred CCCCCCCCCCCccccccc-------cCcceEeCCCCChhhHHHHHHHHHcCCCCCCCCCcCChhcce
Confidence 346789999999976211 133457889999999999999999999999999999988763
No 35
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=99.27 E-value=1.6e-12 Score=97.24 Aligned_cols=51 Identities=31% Similarity=0.698 Sum_probs=44.1
Q ss_pred ccCCCccccCchhhhhhhhhhccccccCceeEEe-CCCCccchhhHHHhhccCCcccccccCcccc
Q 042810 162 VKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITM-PCHHIFHASCISRWLEEQNSCPMCRRQIQYE 226 (230)
Q Consensus 162 ~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~L-pC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~ 226 (230)
..++..|+||++.+.+ ++.+ +|||.||..||..|+..+.+||+||..+...
T Consensus 12 ~~~~~~C~IC~~~~~~--------------p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 63 (108)
T 2ckl_A 12 LNPHLMCVLCGGYFID--------------ATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKT 63 (108)
T ss_dssp HGGGTBCTTTSSBCSS--------------EEEETTTCCEEEHHHHHHHHTSCSBCTTTCCBSCSS
T ss_pred cCCcCCCccCChHHhC--------------cCEeCCCCChhhHHHHHHHHHhCCcCcCCCcccccc
Confidence 3456789999999855 6666 9999999999999999999999999998754
No 36
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=1.6e-12 Score=87.79 Aligned_cols=45 Identities=31% Similarity=0.687 Sum_probs=38.5
Q ss_pred cccCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhc---cCCccccc
Q 042810 161 LVKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLE---EQNSCPMC 219 (230)
Q Consensus 161 ~~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~---~~~tCP~C 219 (230)
...++..|+||++.+.. ++.++|||.||..||.+|++ .+.+||+|
T Consensus 16 ~~~~~~~C~IC~~~~~~--------------p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 16 KLQEEVICPICLDILQK--------------PVTIDCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCCCBCTTTCSBCSS--------------CEECTTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred hCccCCCCCcCCchhCC--------------eEEeCCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 34557899999999865 77789999999999999998 45689998
No 37
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=99.26 E-value=1.1e-12 Score=100.50 Aligned_cols=49 Identities=31% Similarity=0.623 Sum_probs=42.7
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCC-cccccccCccc
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQN-SCPMCRRQIQY 225 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~-tCP~CR~~i~~ 225 (230)
.++..|+||++.|.. ++.+||||.||..||..|+..+. +||+||..+..
T Consensus 50 ~~~~~C~IC~~~~~~--------------p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 50 EETFQCICCQELVFR--------------PITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGR 99 (124)
T ss_dssp HHHTBCTTTSSBCSS--------------EEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred ccCCCCCcCChHHcC--------------cEEeeCCCcccHHHHHHHHhHCcCCCCCCCccCCC
Confidence 346789999999866 77889999999999999998554 99999999976
No 38
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=99.26 E-value=2e-12 Score=93.76 Aligned_cols=49 Identities=22% Similarity=0.614 Sum_probs=42.1
Q ss_pred cccCCCccccCchhhhhhhhhhccccccCceeEEeC-CCCccchhhHHHhhccC--CcccccccCc
Q 042810 161 LVKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMP-CHHIFHASCISRWLEEQ--NSCPMCRRQI 223 (230)
Q Consensus 161 ~~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~Lp-C~H~FH~~CI~~Wl~~~--~tCP~CR~~i 223 (230)
...++..|+||++.|.+ ++.+| |||.||..||..|+..+ .+||+||..+
T Consensus 9 ~~~~~~~C~IC~~~~~~--------------p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 9 PIPDELLCLICKDIMTD--------------AVVIPCCGNSYCDECIRTALLESDEHTCPTCHQND 60 (92)
T ss_dssp CCCTTTEETTTTEECSS--------------CEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSS
T ss_pred cCCcCCCCCCCChhhcC--------------ceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcC
Confidence 33457899999999866 78899 99999999999999754 5899999997
No 39
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.24 E-value=2.9e-12 Score=89.94 Aligned_cols=51 Identities=24% Similarity=0.565 Sum_probs=42.0
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccC--CcccccccCcccc
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQ--NSCPMCRRQIQYE 226 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~--~tCP~CR~~i~~~ 226 (230)
+..+.|+||++.+.. ++ +...|+|.||..||.+||+++ .+||+||+++..+
T Consensus 13 ~~i~~C~IC~~~i~~-----------g~--~C~~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~~~ 65 (74)
T 2ct0_A 13 DAVKICNICHSLLIQ-----------GQ--SCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPHE 65 (74)
T ss_dssp SSSCBCSSSCCBCSS-----------SE--ECSSSCCEECHHHHHHHSTTCSSCCCTTTCSCCCSC
T ss_pred CCCCcCcchhhHccc-----------CC--ccCCCCchhhHHHHHHHHHhcCCCCCCCCcCcCCCC
Confidence 346789999999865 32 333799999999999999987 8999999998654
No 40
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=2.4e-12 Score=85.21 Aligned_cols=45 Identities=38% Similarity=0.933 Sum_probs=37.3
Q ss_pred cccCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhh---ccCCccccc
Q 042810 161 LVKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWL---EEQNSCPMC 219 (230)
Q Consensus 161 ~~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl---~~~~tCP~C 219 (230)
...++..|+||++.+.. ++.++|||.||..||.+|+ +.+.+||+|
T Consensus 11 ~~~~~~~C~IC~~~~~~--------------p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 11 NLQVEASCSVCLEYLKE--------------PVIIECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CSCCCCBCSSSCCBCSS--------------CCCCSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred ccccCCCCccCCcccCc--------------cEeCCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 34457899999999865 5668999999999999995 456789998
No 41
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=99.22 E-value=1.7e-12 Score=98.69 Aligned_cols=54 Identities=24% Similarity=0.603 Sum_probs=45.9
Q ss_pred cccCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCC-cccccccCccccCC
Q 042810 161 LVKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQN-SCPMCRRQIQYEDL 228 (230)
Q Consensus 161 ~~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~-tCP~CR~~i~~~~l 228 (230)
...++..|+||++.+.. ++.++|||.||..||.+|++.+. +||+||..+..+++
T Consensus 14 ~~~~~~~C~IC~~~~~~--------------p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~ 68 (118)
T 3hct_A 14 PLESKYECPICLMALRE--------------AVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQL 68 (118)
T ss_dssp CCCGGGBCTTTCSBCSS--------------EEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGGC
T ss_pred CCCCCCCCCcCChhhcC--------------eEECCcCChhhHHHHHHHHhhCCCCCCCCCCCcCHHhc
Confidence 33446789999999865 67789999999999999998765 99999999987765
No 42
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.22 E-value=2.6e-12 Score=96.23 Aligned_cols=51 Identities=29% Similarity=0.754 Sum_probs=43.5
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCC---cccccccCccccCCC
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQN---SCPMCRRQIQYEDLV 229 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~---tCP~CR~~i~~~~l~ 229 (230)
...|+||++.+.. ++.+||||.||..||..|+..+. +||+||..+..+++.
T Consensus 21 ~~~C~IC~~~~~~--------------p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~~~ 74 (112)
T 1jm7_A 21 ILECPICLELIKE--------------PVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74 (112)
T ss_dssp HTSCSSSCCCCSS--------------CCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTTCB
T ss_pred CCCCcccChhhcC--------------eEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCHhhcC
Confidence 5689999998855 55689999999999999998654 899999999877653
No 43
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=99.21 E-value=1.8e-12 Score=98.07 Aligned_cols=52 Identities=31% Similarity=0.614 Sum_probs=45.3
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhcc-CCcccccccCccccCCC
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEE-QNSCPMCRRQIQYEDLV 229 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~-~~tCP~CR~~i~~~~l~ 229 (230)
++..|+||++.+.+ ++.++|||.||..||.+|+.. +.+||+||..+..+++.
T Consensus 22 ~~~~C~IC~~~~~~--------------p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~ 74 (116)
T 1rmd_A 22 KSISCQICEHILAD--------------PVETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTDLE 74 (116)
T ss_dssp HHTBCTTTCSBCSS--------------EEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCB
T ss_pred CCCCCCCCCcHhcC--------------cEEcCCCCcccHHHHHHHHhHCcCcCCCCCCCCCHhhcc
Confidence 36789999999865 677999999999999999987 77999999999877653
No 44
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.18 E-value=3.3e-12 Score=84.68 Aligned_cols=47 Identities=21% Similarity=0.487 Sum_probs=40.1
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCcccc
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYE 226 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~ 226 (230)
.++..|+||++.+.. ++.+||||.||..||..| ..+||+||+.+..+
T Consensus 4 ~~~~~C~IC~~~~~~--------------p~~l~CgH~fC~~Ci~~~---~~~CP~Cr~~~~~~ 50 (56)
T 1bor_A 4 FQFLRCQQCQAEAKC--------------PKLLPCLHTLCSGCLEAS---GMQCPICQAPWPLG 50 (56)
T ss_dssp CCCSSCSSSCSSCBC--------------CSCSTTSCCSBTTTCSSS---SSSCSSCCSSSSCC
T ss_pred ccCCCceEeCCccCC--------------eEEcCCCCcccHHHHccC---CCCCCcCCcEeecC
Confidence 356789999999865 677999999999999886 67899999998654
No 45
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=99.17 E-value=1e-11 Score=89.32 Aligned_cols=53 Identities=15% Similarity=0.125 Sum_probs=48.0
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCccccCCC
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYEDLV 229 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~~l~ 229 (230)
.++..|+||++.|.+ ++.++|||.|+..||..|+..+.+||+||..+..++|+
T Consensus 12 p~~~~CpI~~~~m~d--------------PV~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~~~l~ 64 (85)
T 2kr4_A 12 PDEFRDPLMDTLMTD--------------PVRLPSGTVMDRSIILRHLLNSPTDPFNRQMLTESMLE 64 (85)
T ss_dssp CTTTBCTTTCSBCSS--------------EEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCGGGCE
T ss_pred chheECcccCchhcC--------------CeECCCCCEECHHHHHHHHhcCCCCCCCcCCCChHhcc
Confidence 457799999999877 88999999999999999999889999999999887764
No 46
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=99.16 E-value=1.2e-11 Score=98.21 Aligned_cols=49 Identities=29% Similarity=0.621 Sum_probs=43.2
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCC-cccccccCcccc
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQN-SCPMCRRQIQYE 226 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~-tCP~CR~~i~~~ 226 (230)
++..|+||++.|.+ ++.+||||.||..||..|+.... +||+||..+..+
T Consensus 77 ~~~~C~IC~~~~~~--------------pv~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 77 QSFMCVCCQELVYQ--------------PVTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQN 126 (150)
T ss_dssp HHTBCTTTSSBCSS--------------EEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTT
T ss_pred cCCEeecCChhhcC--------------CEEcCCCCchhHHHHHHHHHhCCCcCCCCCccCCCC
Confidence 45789999999866 77799999999999999998765 899999999876
No 47
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=99.15 E-value=1.2e-11 Score=99.18 Aligned_cols=48 Identities=33% Similarity=0.735 Sum_probs=41.1
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEe-CCCCccchhhHHHhhcc-CCcccccccCcccc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITM-PCHHIFHASCISRWLEE-QNSCPMCRRQIQYE 226 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~L-pC~H~FH~~CI~~Wl~~-~~tCP~CR~~i~~~ 226 (230)
+..|+||++.+.. ++.+ ||||.||..||..|+.. +.+||+||..+...
T Consensus 54 ~~~C~IC~~~~~~--------------p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 103 (165)
T 2ckl_B 54 ELMCPICLDMLKN--------------TMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 103 (165)
T ss_dssp HHBCTTTSSBCSS--------------EEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCCSG
T ss_pred CCCCcccChHhhC--------------cCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCCCc
Confidence 5589999999855 5555 89999999999999987 77899999998543
No 48
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=99.15 E-value=1.6e-11 Score=91.01 Aligned_cols=53 Identities=17% Similarity=0.137 Sum_probs=48.1
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCccccCCC
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYEDLV 229 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~~l~ 229 (230)
.++..|+||++.|.+ ++.+||||.|+..||..|+..+.+||+||.++..++|+
T Consensus 27 p~~~~CpI~~~~m~d--------------PV~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~~~L~ 79 (100)
T 2kre_A 27 PDEFRDPLMDTLMTD--------------PVRLPSGTIMDRSIILRHLLNSPTDPFNRQTLTESMLE 79 (100)
T ss_dssp STTTBCTTTCSBCSS--------------EEEETTTEEEEHHHHHHHTTSCSBCSSSCCBCCTTSSE
T ss_pred cHhhCCcCccCcccC--------------CeECCCCCEEchHHHHHHHHcCCCCCCCCCCCChhhce
Confidence 347799999999877 88999999999999999999889999999999888764
No 49
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=99.14 E-value=2.2e-11 Score=89.99 Aligned_cols=53 Identities=13% Similarity=0.149 Sum_probs=47.9
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEeCCC-CccchhhHHHhhccCCcccccccCccccCCC
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCH-HIFHASCISRWLEEQNSCPMCRRQIQYEDLV 229 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~-H~FH~~CI~~Wl~~~~tCP~CR~~i~~~~l~ 229 (230)
.++..|+||++.|.+ ++.++|| |.|+..||.+|+..+.+||+||.++..++|+
T Consensus 20 p~~~~CpI~~~~m~d--------------PV~~~cG~htf~r~cI~~~l~~~~~cP~~~~~l~~~~L~ 73 (98)
T 1wgm_A 20 CDEFLDPIMSTLMCD--------------PVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIR 73 (98)
T ss_dssp CTTTBCTTTCSBCSS--------------EEECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCCTTTSE
T ss_pred cHhcCCcCccccccC--------------CeECCCCCeEECHHHHHHHHHhCCCCCCCCCCCChhhce
Confidence 347799999999877 8889999 9999999999999889999999999888764
No 50
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=99.13 E-value=9.1e-12 Score=94.05 Aligned_cols=47 Identities=32% Similarity=0.879 Sum_probs=41.4
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhcc-CCcccccccCccc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEE-QNSCPMCRRQIQY 225 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~-~~tCP~CR~~i~~ 225 (230)
+..|+||++.+.. ++.++|||.||..||..|+.. +.+||+||..+..
T Consensus 15 ~~~C~iC~~~~~~--------------p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 15 ECQCGICMEILVE--------------PVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSS 62 (115)
T ss_dssp HHBCTTTCSBCSS--------------CEECTTSCEECHHHHCCCCCTTTSBCTTTCCBCHH
T ss_pred CCCCccCCcccCc--------------eeEcCCCCHHhHHHHHHHHhHCcCCCCCCCcccCc
Confidence 5689999999865 778899999999999999976 6799999998863
No 51
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=99.11 E-value=1.4e-11 Score=83.98 Aligned_cols=47 Identities=23% Similarity=0.538 Sum_probs=40.5
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEe--CCCCc-cchhhHHHhhccCCcccccccCcc
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITM--PCHHI-FHASCISRWLEEQNSCPMCRRQIQ 224 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~L--pC~H~-FH~~CI~~Wl~~~~tCP~CR~~i~ 224 (230)
++..|.||++...+ ...+ ||||. |+..|+..|.+.+..||+||+++.
T Consensus 7 ~~~~C~IC~~~~~~--------------~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~ 56 (64)
T 2vje_A 7 AIEPCVICQGRPKN--------------GCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQ 56 (64)
T ss_dssp GGSCCTTTSSSCSC--------------EEEEETTEEEEEECHHHHHHHHHTTCCCTTTCCCCC
T ss_pred CcCCCCcCCCCCCC--------------EEEECCCCCChhhHHHHHHHHHHcCCcCCCcCcchh
Confidence 35689999998644 5666 99999 899999999998899999999885
No 52
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=99.11 E-value=2.2e-11 Score=110.05 Aligned_cols=53 Identities=30% Similarity=0.752 Sum_probs=45.8
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhc-cCCcccccccCccccCCC
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLE-EQNSCPMCRRQIQYEDLV 229 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~-~~~tCP~CR~~i~~~~l~ 229 (230)
.....|+||++.+.. ++.+||||.||..|+..|+. .+.+||+||+++...+.+
T Consensus 330 ~~~~~C~ICle~~~~--------------pv~lpCGH~FC~~Ci~~wl~~~~~~CP~CR~~i~~~~~i 383 (389)
T 2y1n_A 330 STFQLCKICAENDKD--------------VKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGTEPI 383 (389)
T ss_dssp TSSSBCTTTSSSBCC--------------EEEETTCCEECHHHHHHHHHHTCSBCTTTCCBCCEEEEC
T ss_pred CCCCCCCccCcCCCC--------------eEEeCCCChhhHHHHHHHHhcCCCCCCCCCCccCCceeE
Confidence 345799999998755 78899999999999999998 688999999999876544
No 53
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=99.10 E-value=2.8e-11 Score=85.74 Aligned_cols=56 Identities=25% Similarity=0.523 Sum_probs=42.8
Q ss_pred ccCCCccccCchhhhhhhhhhccccccCceeEEeC--CCCccchhhHHHhhc-cCCcccccccCccccCCC
Q 042810 162 VKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMP--CHHIFHASCISRWLE-EQNSCPMCRRQIQYEDLV 229 (230)
Q Consensus 162 ~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~Lp--C~H~FH~~CI~~Wl~-~~~tCP~CR~~i~~~~l~ 229 (230)
.+++..|+||++.+.. ..+..+| |||.||..|+..|++ ....||.||+.+..+.+.
T Consensus 8 ~~~~~~CpICle~~~~------------~d~~~~p~~CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~~~~~~ 66 (78)
T 1e4u_A 8 KEDPVECPLCMEPLEI------------DDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDPAV 66 (78)
T ss_dssp CCCCCBCTTTCCBCCT------------TTTTCCSSTTSCCCCHHHHHHHTTSSCSBCTTTCCBCSSCSSC
T ss_pred cccCCcCCccCccCcc------------ccccccccCCCCCcCHHHHHHHHhcCCCCCCCCCCccCCCchh
Confidence 4557899999998743 1133444 999999999999874 357899999999876653
No 54
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.09 E-value=1.7e-11 Score=92.98 Aligned_cols=49 Identities=29% Similarity=0.665 Sum_probs=42.7
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEe-CCCCccchhhHHHhhccCCcccccccCccccCC
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITM-PCHHIFHASCISRWLEEQNSCPMCRRQIQYEDL 228 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~L-pC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~~l 228 (230)
++..|+||++.|.. ++.+ +|||.||..||..|+. .+||+||..+...++
T Consensus 21 ~~~~C~IC~~~~~~--------------pv~~~~CgH~fC~~Ci~~~~~--~~CP~Cr~~~~~~~~ 70 (117)
T 1jm7_B 21 KLLRCSRCTNILRE--------------PVCLGGCEHIFCSNCVSDCIG--TGCPVCYTPAWIQDL 70 (117)
T ss_dssp HTTSCSSSCSCCSS--------------CBCCCSSSCCBCTTTGGGGTT--TBCSSSCCBCSCSSC
T ss_pred hCCCCCCCChHhhC--------------ccEeCCCCCHHHHHHHHHHhc--CCCcCCCCcCccccc
Confidence 46789999999865 6677 8999999999999987 889999999976665
No 55
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=99.07 E-value=3.5e-11 Score=94.51 Aligned_cols=51 Identities=22% Similarity=0.479 Sum_probs=42.9
Q ss_pred cccCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCC-cccccccCccc
Q 042810 161 LVKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQN-SCPMCRRQIQY 225 (230)
Q Consensus 161 ~~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~-tCP~CR~~i~~ 225 (230)
..+++..|+||++.+.+ ++.++|||.||..||.+|++.+. +||+||.++..
T Consensus 27 ~l~~~~~C~IC~~~~~~--------------pv~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~ 78 (141)
T 3knv_A 27 KLEAKYLCSACRNVLRR--------------PFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIY 78 (141)
T ss_dssp GCCGGGBCTTTCSBCSS--------------EEECTTSCEEEHHHHHHHGGGSCEECHHHHHTTCC
T ss_pred cCCcCcCCCCCChhhcC--------------cEECCCCCccCHHHHHHHHhcCCCCCCCCCCcccc
Confidence 34456789999999866 67789999999999999998665 89999997643
No 56
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=99.07 E-value=3.1e-11 Score=81.97 Aligned_cols=47 Identities=23% Similarity=0.496 Sum_probs=40.1
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEe--CCCCc-cchhhHHHhhccCCcccccccCcc
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITM--PCHHI-FHASCISRWLEEQNSCPMCRRQIQ 224 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~L--pC~H~-FH~~CI~~Wl~~~~tCP~CR~~i~ 224 (230)
.+..|.||++...+ ...+ ||||. |+..|+..|.+++.+||+||+++.
T Consensus 6 ~~~~C~IC~~~~~~--------------~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~ 55 (63)
T 2vje_B 6 LLKPCSLCEKRPRD--------------GNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQ 55 (63)
T ss_dssp GGSBCTTTSSSBSC--------------EEEEETTEEEEEECHHHHHHHHHTTCBCTTTCCBCC
T ss_pred cCCCCcccCCcCCC--------------eEEEecCCCCHhHHHHHHHHHHHhCCcCCCcCchhh
Confidence 35689999997644 4555 99998 999999999988889999999885
No 57
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=99.06 E-value=2.3e-11 Score=85.14 Aligned_cols=44 Identities=30% Similarity=0.835 Sum_probs=38.8
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeCCCCc-cchhhHHHhhccCCcccccccCccc
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHI-FHASCISRWLEEQNSCPMCRRQIQY 225 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~-FH~~CI~~Wl~~~~tCP~CR~~i~~ 225 (230)
++..|+||++.+.+ ++.+||||. ||..|+..| .+||+||+.+..
T Consensus 23 ~~~~C~iC~~~~~~--------------~~~~pCgH~~~C~~C~~~~----~~CP~Cr~~i~~ 67 (74)
T 4ic3_A 23 EEKLCKICMDRNIA--------------IVFVPCGHLVTCKQCAEAV----DKCPMCYTVITF 67 (74)
T ss_dssp HHTBCTTTSSSBCC--------------EEEETTCCBCCCHHHHTTC----SBCTTTCCBCSE
T ss_pred cCCCCCCCCCCCCC--------------EEEcCCCChhHHHHhhhcC----ccCCCcCcCccC
Confidence 35689999998755 788999999 999999999 789999998864
No 58
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=98.97 E-value=8.8e-11 Score=94.48 Aligned_cols=54 Identities=24% Similarity=0.608 Sum_probs=45.6
Q ss_pred cccCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccC-CcccccccCccccCC
Q 042810 161 LVKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQ-NSCPMCRRQIQYEDL 228 (230)
Q Consensus 161 ~~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~-~tCP~CR~~i~~~~l 228 (230)
...++..|+||++.+.+ ++.++|||.||..||.+|++.+ .+||+||..+..+++
T Consensus 14 ~~~~~~~C~IC~~~~~~--------------pv~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~ 68 (170)
T 3hcs_A 14 PLESKYECPICLMALRE--------------AVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQL 68 (170)
T ss_dssp CCCGGGBCTTTCSBCSS--------------EEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGGC
T ss_pred CCCCCCCCCCCChhhcC--------------cEECCCCCHHHHHHHHHHHHhCCCCCCCCccCcchhhh
Confidence 33456789999999866 6778999999999999999765 499999999987665
No 59
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.95 E-value=1.5e-10 Score=84.68 Aligned_cols=53 Identities=28% Similarity=0.640 Sum_probs=44.3
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEeC-CCCccchhhHHHhhccC------Ccccc--cccC-ccccCCC
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMP-CHHIFHASCISRWLEEQ------NSCPM--CRRQ-IQYEDLV 229 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~Lp-C~H~FH~~CI~~Wl~~~------~tCP~--CR~~-i~~~~l~ 229 (230)
..+..|+||++.|.+ ++.+| |||.|+..||.+|+..+ .+||+ |+.. +..++|+
T Consensus 5 ~~~~~CPI~~~~~~d--------------PV~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~~l~~~~L~ 67 (94)
T 2yu4_A 5 SSGFTCPITKEEMKK--------------PVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHTDIRKSDLI 67 (94)
T ss_dssp SSCCBCTTTCSBCSS--------------EEEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCCCBCGGGEE
T ss_pred CcEeECcCcCchhcC--------------CEEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCcccccCHhhCc
Confidence 346789999999877 88896 99999999999999764 48999 9877 7766653
No 60
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.92 E-value=3.5e-10 Score=96.79 Aligned_cols=52 Identities=15% Similarity=0.164 Sum_probs=45.7
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccC-CcccccccCccccCCC
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQ-NSCPMCRRQIQYEDLV 229 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~-~tCP~CR~~i~~~~l~ 229 (230)
....|+||++.|.+ ++.+||||.||..||..|+... .+||+||.++..++++
T Consensus 207 ~~~~c~i~~~~~~d--------------Pv~~~~gh~f~~~~i~~~~~~~~~~cP~~~~~~~~~~l~ 259 (281)
T 2c2l_A 207 DYLCGKISFELMRE--------------PCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQLI 259 (281)
T ss_dssp STTBCTTTCSBCSS--------------EEECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCGGGCE
T ss_pred cccCCcCcCCHhcC--------------CeECCCCCEECHHHHHHHHHHCCCCCcCCCCCCchhcCc
Confidence 46789999999877 8899999999999999999864 4599999999887764
No 61
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.85 E-value=3e-10 Score=79.43 Aligned_cols=43 Identities=30% Similarity=0.863 Sum_probs=36.6
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCc-cchhhHHHhhccCCcccccccCccc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHI-FHASCISRWLEEQNSCPMCRRQIQY 225 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~-FH~~CI~~Wl~~~~tCP~CR~~i~~ 225 (230)
+..|+||++.+.+ ++.+||||. ||..|+.. ...||+||.++..
T Consensus 25 ~~~C~IC~~~~~~--------------~~~~pCgH~~~C~~C~~~----~~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 25 EKLCKICMDRNIA--------------IVFVPCGHLVTCKQCAEA----VDKCPMCYTVITF 68 (75)
T ss_dssp HHSCSSSCSSCCC--------------BCCSSSCCCCBCHHHHHH----CSBCTTTCCBCCC
T ss_pred CCCCCcCCCCCCC--------------EEEecCCCHHHHHHHhhC----CCCCccCCceecC
Confidence 4579999998755 777999999 99999965 3789999999865
No 62
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.84 E-value=9.6e-10 Score=75.69 Aligned_cols=47 Identities=28% Similarity=0.774 Sum_probs=39.1
Q ss_pred cccCCCccccCchhhhhhhhhhccccccCceeEEeCCCCc-cchhhHHHhhccCCcccccccCccc
Q 042810 161 LVKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHI-FHASCISRWLEEQNSCPMCRRQIQY 225 (230)
Q Consensus 161 ~~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~-FH~~CI~~Wl~~~~tCP~CR~~i~~ 225 (230)
...++..|.||++...+ ++.+||||. ||..|+.. ...||+||+.+..
T Consensus 11 ~~~~~~~C~IC~~~~~~--------------~v~~pCgH~~~C~~C~~~----~~~CP~CR~~i~~ 58 (68)
T 2ea5_A 11 SEENSKDCVVCQNGTVN--------------WVLLPCRHTCLCDGCVKY----FQQCPMCRQFVQE 58 (68)
T ss_dssp SCCCSSCCSSSSSSCCC--------------CEETTTTBCCSCTTHHHH----CSSCTTTCCCCCC
T ss_pred cCCCCCCCCCcCcCCCC--------------EEEECCCChhhhHHHHhc----CCCCCCCCcchhc
Confidence 33457789999998655 888999999 99999984 4789999998854
No 63
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=98.84 E-value=1e-09 Score=89.47 Aligned_cols=53 Identities=13% Similarity=0.143 Sum_probs=46.2
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccC-CcccccccCccccCCC
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQ-NSCPMCRRQIQYEDLV 229 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~-~tCP~CR~~i~~~~l~ 229 (230)
.....|+||++.|.+ ++.+||||.|+..||..|+... .+||+||.++..++|+
T Consensus 104 p~~f~CPI~~elm~D--------------PV~~~~Ghtfer~~I~~~l~~~~~tcP~t~~~l~~~~L~ 157 (179)
T 2f42_A 104 PDYLCGKISFELMRE--------------PCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQDQLI 157 (179)
T ss_dssp CGGGBCTTTCSBCSS--------------EEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCE
T ss_pred cHhhcccCccccCCC--------------CeECCCCCEECHHHHHHHHHhCCCCCCCCcCCCChhhCc
Confidence 346789999999877 8889999999999999999864 5799999999887764
No 64
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=98.82 E-value=5.2e-10 Score=79.29 Aligned_cols=44 Identities=36% Similarity=0.761 Sum_probs=37.8
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeCCCCc-cchhhHHHhhccCCcccccccCccc
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHI-FHASCISRWLEEQNSCPMCRRQIQY 225 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~-FH~~CI~~Wl~~~~tCP~CR~~i~~ 225 (230)
++..|+||++.+.+ ++.+||||. ||..|+..| ..||+||..+..
T Consensus 17 ~~~~C~IC~~~~~~--------------~v~~pCgH~~~C~~C~~~~----~~CP~Cr~~i~~ 61 (79)
T 2yho_A 17 EAMLCMVCCEEEIN--------------STFCPCGHTVCCESCAAQL----QSCPVCRSRVEH 61 (79)
T ss_dssp HHTBCTTTSSSBCC--------------EEEETTCBCCBCHHHHTTC----SBCTTTCCBCCE
T ss_pred CCCEeEEeCcccCc--------------EEEECCCCHHHHHHHHHhc----CcCCCCCchhhC
Confidence 35689999998755 888999999 999999988 389999998754
No 65
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=98.77 E-value=8.8e-10 Score=97.56 Aligned_cols=57 Identities=19% Similarity=0.574 Sum_probs=40.0
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccC-----------CcccccccCccc
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQ-----------NSCPMCRRQIQY 225 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~-----------~tCP~CR~~i~~ 225 (230)
+...+|+||++.+.+..... .......+|+|.||..|+.+||++. .+||+||++++.
T Consensus 306 e~~~ECaICys~~l~~g~lP------dk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs~ 373 (381)
T 3k1l_B 306 NEELRCNICFAYRLDGGEVP------LVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLST 373 (381)
T ss_dssp CSCCSCSSSCCSSCTTCCCC------CBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEEG
T ss_pred cCCccCcccceeecCCCCCc------cccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCCc
Confidence 45778999999986511000 0111123599999999999999752 479999998854
No 66
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=98.73 E-value=2.3e-09 Score=72.24 Aligned_cols=50 Identities=16% Similarity=0.319 Sum_probs=45.4
Q ss_pred CccccCchhhhhhhhhhccccccCceeEEe-CCCCccchhhHHHhhccCCcccccccCccccCCC
Q 042810 166 DNCAVCLEELIAKEEIKGQTTEKKTQLITM-PCHHIFHASCISRWLEEQNSCPMCRRQIQYEDLV 229 (230)
Q Consensus 166 ~~C~ICle~~~~~~~~~~~~~~~~~~v~~L-pC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~~l~ 229 (230)
..|+||++.+.+ ++.+ +|||+|.+.||.+|++++.+||+.+.++..++|+
T Consensus 4 ~~CpIs~~~m~d--------------PV~~~~sG~~yer~~I~~~l~~~~~cP~t~~~L~~~~Li 54 (61)
T 2bay_A 4 MLCAISGKVPRR--------------PVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIEEIV 54 (61)
T ss_dssp CCCTTTCSCCSS--------------EEEETTTTEEEEHHHHHHHHHHHSBCTTTCCBCCGGGCE
T ss_pred EEecCCCCCCCC--------------CEEeCCCCcEEcHHHHHHHHHhCCCCcCCcCCCChhhcE
Confidence 469999999866 7788 7999999999999999888999999999999885
No 67
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=98.73 E-value=3.2e-09 Score=71.37 Aligned_cols=49 Identities=29% Similarity=0.594 Sum_probs=37.8
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEeCCC--C---ccchhhHHHhhcc--CCcccccccCccc
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCH--H---IFHASCISRWLEE--QNSCPMCRRQIQY 225 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~--H---~FH~~CI~~Wl~~--~~tCP~CR~~i~~ 225 (230)
+++..|.||+++. ++.. .+||. | .||..|+.+|+.. +.+||+||.++..
T Consensus 4 ~~~~~CrIC~~~~-------------~~~l-~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~~ 59 (60)
T 1vyx_A 4 EDVPVCWICNEEL-------------GNER-FRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYNT 59 (60)
T ss_dssp CSCCEETTTTEEC-------------SCCC-CCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCCC
T ss_pred CCCCEeEEeecCC-------------CCce-ecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeeec
Confidence 4567899999862 2233 58955 5 8999999999974 5789999998754
No 68
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=98.64 E-value=7.9e-09 Score=92.29 Aligned_cols=45 Identities=27% Similarity=0.833 Sum_probs=39.8
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEeCCCCc-cchhhHHHhhccCCcccccccCccc
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHI-FHASCISRWLEEQNSCPMCRRQIQY 225 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~-FH~~CI~~Wl~~~~tCP~CR~~i~~ 225 (230)
+++..|+||++.+.. ++.+||||. ||..|+..| ..||+||..+..
T Consensus 293 ~~~~~C~IC~~~~~~--------------~v~lpCgH~~fC~~C~~~~----~~CP~CR~~i~~ 338 (345)
T 3t6p_A 293 QEERTCKVCMDKEVS--------------VVFIPCGHLVVCQECAPSL----RKCPICRGIIKG 338 (345)
T ss_dssp HTTCBCTTTSSSBCC--------------EEEETTCCEEECTTTGGGC----SBCTTTCCBCCE
T ss_pred cCCCCCCccCCcCCc--------------eEEcCCCChhHhHHHHhcC----CcCCCCCCCccC
Confidence 457899999999766 888999999 999999999 689999998864
No 69
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.60 E-value=6.3e-09 Score=75.67 Aligned_cols=51 Identities=29% Similarity=0.680 Sum_probs=39.2
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhcc--------CCcccc--cccC--cccc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEE--------QNSCPM--CRRQ--IQYE 226 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~--------~~tCP~--CR~~--i~~~ 226 (230)
..+|+||++++.. .......+|||.||..|+.++++. .-+||. ||.. ++.+
T Consensus 5 ~~~C~IC~~~~~~-----------~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~~~~~~ 67 (94)
T 1wim_A 5 SSGCKLCLGEYPV-----------EQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQEN 67 (94)
T ss_dssp BCCCSSSCCCCBG-----------GGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCCEECHH
T ss_pred CcCCcccCccccc-----------ccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCCCccCHH
Confidence 5689999999865 333444479999999999999863 237999 9998 6544
No 70
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=98.53 E-value=2.3e-08 Score=85.61 Aligned_cols=53 Identities=25% Similarity=0.577 Sum_probs=44.0
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEE-eCCCCccchhhHHHhhccC--Ccccc--cccCccccCCC
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLIT-MPCHHIFHASCISRWLEEQ--NSCPM--CRRQIQYEDLV 229 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~-LpC~H~FH~~CI~~Wl~~~--~tCP~--CR~~i~~~~l~ 229 (230)
..+..|+||++.|.+ ++. ..|||.|++.||..|++.+ .+||+ ||+.+..++|.
T Consensus 179 ~~el~CPIcl~~f~D--------------PVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~~~dL~ 236 (267)
T 3htk_C 179 KIELTCPITCKPYEA--------------PLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVSMRDFV 236 (267)
T ss_dssp BCCSBCTTTSSBCSS--------------EEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEECGGGEE
T ss_pred ceeeECcCccCcccC--------------CeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCchhhCC
Confidence 346799999999966 555 4899999999999999764 47999 99998877763
No 71
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=98.27 E-value=5.1e-07 Score=66.09 Aligned_cols=37 Identities=27% Similarity=0.573 Sum_probs=31.5
Q ss_pred CceeEEeCCCCccchhhHHHhhc-cCCcccccccCccc
Q 042810 189 KTQLITMPCHHIFHASCISRWLE-EQNSCPMCRRQIQY 225 (230)
Q Consensus 189 ~~~v~~LpC~H~FH~~CI~~Wl~-~~~tCP~CR~~i~~ 225 (230)
....+.+||+|+||.+|+..|.+ +.++||+||.+|..
T Consensus 12 ~iygRmIPCkHvFCydCa~~~~~~~~k~Cp~C~~~V~r 49 (101)
T 3vk6_A 12 KVYGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQR 49 (101)
T ss_dssp SEEEEEETTCCEEEHHHHHHHHHTTCCBCTTTCCBCSE
T ss_pred EEEeeeccccccHHHHHHHHHHhccCCCCcCcCCeeee
Confidence 44578889999999999999975 46899999998854
No 72
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=98.00 E-value=3.7e-06 Score=71.28 Aligned_cols=50 Identities=24% Similarity=0.567 Sum_probs=40.5
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCC--cccccccCcccc
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQN--SCPMCRRQIQYE 226 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~--tCP~CR~~i~~~ 226 (230)
.-..|.||.+.... + .+.-.|+|.||..|+..|++.+. +||.|+..|+.+
T Consensus 179 ~i~~C~iC~~iv~~-----------g--~~C~~C~~~~H~~C~~~~~~~~~~~~CP~C~~~W~~~ 230 (238)
T 3nw0_A 179 AVKICNICHSLLIQ-----------G--QSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPHE 230 (238)
T ss_dssp TCCBCTTTCSBCSS-----------C--EECSSSCCEECHHHHHHHTTTCSSCBCTTTCCBCCSC
T ss_pred CCCcCcchhhHHhC-----------C--cccCccChHHHHHHHHHHHHhCCCCCCCCCCCCCCCC
Confidence 46789999998854 2 33334999999999999998754 999999999765
No 73
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=95.55 E-value=0.0043 Score=44.62 Aligned_cols=47 Identities=23% Similarity=0.608 Sum_probs=38.5
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeCC-CCccchhhHHHhhccCCcccccccCcccc
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPC-HHIFHASCISRWLEEQNSCPMCRRQIQYE 226 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC-~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~ 226 (230)
.-..|-.|+-.... .+.| .|.+|..|+.-.|...+.||+|+.+++++
T Consensus 27 G~~nCKsCWf~~k~----------------LV~C~dHYLCl~CLtlmL~~SdrCpIC~~pLPtk 74 (99)
T 2ko5_A 27 GPQFCKSCWFENKG----------------LVECNNHYLCLNCLTLLLSVSNRCPICKMPLPTK 74 (99)
T ss_dssp CCCCCCSSCSCCSS----------------EEECSSCEEEHHHHHHTCSSSSEETTTTEECCCC
T ss_pred CcccChhhccccCC----------------eeeecchhhHHHHHHHHHhhccCCcccCCcCCcc
Confidence 45679999876433 3456 59999999999999999999999998775
No 74
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=94.75 E-value=0.023 Score=38.25 Aligned_cols=48 Identities=23% Similarity=0.491 Sum_probs=34.2
Q ss_pred ccCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCC----cccccccCc
Q 042810 162 VKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQN----SCPMCRRQI 223 (230)
Q Consensus 162 ~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~----tCP~CR~~i 223 (230)
...+..|.||.+. ++-+..=.|...||..|+++.+.... .||.|++..
T Consensus 9 ~~~~~~C~vC~~~--------------~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~ 60 (66)
T 2lri_C 9 LAPGARCGVCGDG--------------TDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGDV 60 (66)
T ss_dssp CCTTCCCTTTSCC--------------TTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTCC
T ss_pred CCCCCCcCCCCCC--------------CeEEECCCCCCceecccCCCccCcCCCCCEECccccCCC
Confidence 3456789999753 33233334999999999998886542 699998754
No 75
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=94.54 E-value=0.014 Score=41.95 Aligned_cols=35 Identities=11% Similarity=0.321 Sum_probs=25.6
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHH-hh
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISR-WL 210 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~-Wl 210 (230)
+..|+||.+.+.. ......++|+|.||..|+.. |.
T Consensus 3 e~~C~~C~~~~~~-----------~av~~C~~C~~~~C~~Cl~~~h~ 38 (101)
T 2jun_A 3 KVLCQFCDQDPAQ-----------DAVKTCVTCEVSYCDECLKATHP 38 (101)
T ss_dssp CCBCTTCCSSSCC-----------BCCEEETTTTEEECHHHHHHHSC
T ss_pred CCCCcCCCCCCCC-----------CceEECCcCChHHhHHHCHHHhc
Confidence 5689999986422 12233489999999999998 53
No 76
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=90.17 E-value=0.1 Score=34.37 Aligned_cols=49 Identities=27% Similarity=0.582 Sum_probs=32.5
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEe-CCCCccchhhHHHhhc-----cCCcccccccC
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITM-PCHHIFHASCISRWLE-----EQNSCPMCRRQ 222 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~L-pC~H~FH~~CI~~Wl~-----~~~tCP~CR~~ 222 (230)
.++..|+||...+.+ +...+.- .|...||..|+.--.. .+-.||.|+..
T Consensus 4 ~e~~~C~~C~~~~~~-----------~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k 58 (64)
T 1we9_A 4 GSSGQCGACGESYAA-----------DEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp SSCCCCSSSCCCCCS-----------SSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCCCCCCCCCccCC-----------CCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCc
Confidence 346779999887643 2223333 4999999999864321 23479999764
No 77
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=89.38 E-value=0.14 Score=33.58 Aligned_cols=48 Identities=25% Similarity=0.474 Sum_probs=32.4
Q ss_pred ccCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccC----CcccccccCc
Q 042810 162 VKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQ----NSCPMCRRQI 223 (230)
Q Consensus 162 ~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~----~tCP~CR~~i 223 (230)
+..+..|.||.+. ++-+..=.|...||..|+.+-+... =.||.|+...
T Consensus 6 d~~~~~C~vC~~~--------------g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~ 57 (61)
T 1mm2_A 6 DHHMEFCRVCKDG--------------GELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPA 57 (61)
T ss_dssp CSSCSSCTTTCCC--------------SSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTC
T ss_pred cCCCCcCCCCCCC--------------CCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCch
Confidence 3457789999862 3223333499999999998655432 2599998754
No 78
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=88.88 E-value=0.25 Score=32.40 Aligned_cols=47 Identities=26% Similarity=0.675 Sum_probs=32.0
Q ss_pred ccCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccC----CcccccccC
Q 042810 162 VKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQ----NSCPMCRRQ 222 (230)
Q Consensus 162 ~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~----~tCP~CR~~ 222 (230)
...+..|.||... ++-+..-.|...||..|+..-+... =.||.|++.
T Consensus 8 ~~~~~~C~vC~~~--------------g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 8 TDHQDYCEVCQQG--------------GEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp SCCCSSCTTTSCC--------------SSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred CCCCCCCccCCCC--------------CcEEECCCCChhhhhhccCCCCCCCCCCceECcccccc
Confidence 3457789999863 3223333499999999999855432 269999763
No 79
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=88.09 E-value=0.25 Score=49.16 Aligned_cols=52 Identities=15% Similarity=0.163 Sum_probs=45.6
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeCCC-CccchhhHHHhhccCCcccccccCccccCCC
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCH-HIFHASCISRWLEEQNSCPMCRRQIQYEDLV 229 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~-H~FH~~CI~~Wl~~~~tCP~CR~~i~~~~l~ 229 (230)
+.-.|+|=++-+.+ ++.+|-| +.|-+..|.+|+..+.+||+=|.++..++++
T Consensus 890 ~~F~cPIs~~lM~D--------------PVilpsG~~TydR~~I~~wl~~~~tdP~Tr~~L~~~~li 942 (968)
T 3m62_A 890 DEFLDPLMYTIMKD--------------PVILPASKMNIDRSTIKAHLLSDSTDPFNRMPLKLEDVT 942 (968)
T ss_dssp GGGBCTTTCSBCSS--------------EEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCGGGCE
T ss_pred HHhCCcchhhHHhC--------------CeEcCCCCEEECHHHHHHHHhcCCCCCCCCCCCCccccc
Confidence 35679999999877 8899987 6899999999999999999999999887764
No 80
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=87.84 E-value=0.093 Score=34.28 Aligned_cols=46 Identities=28% Similarity=0.685 Sum_probs=31.5
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccC----CcccccccCc
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQ----NSCPMCRRQI 223 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~----~tCP~CR~~i 223 (230)
.+..|.||... ++-+..=.|...||..|+.+=+... =.||.|+...
T Consensus 4 ~~~~C~vC~~~--------------g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~ 53 (60)
T 2puy_A 4 HEDFCSVCRKS--------------GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQM 53 (60)
T ss_dssp CCSSCTTTCCC--------------SSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHHH
T ss_pred CCCCCcCCCCC--------------CcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccChh
Confidence 46789999873 3223333499999999998655432 2599997654
No 81
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=87.46 E-value=0.29 Score=34.39 Aligned_cols=34 Identities=32% Similarity=0.657 Sum_probs=23.5
Q ss_pred cccCCCccccCchhhhhhhhhhccccccCceeEEeC---CCCccchhhHHHh
Q 042810 161 LVKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMP---CHHIFHASCISRW 209 (230)
Q Consensus 161 ~~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~Lp---C~H~FH~~CI~~W 209 (230)
....|+.|.||---- . -..+| |+-+||..|+.+.
T Consensus 11 ~~~~D~~C~VC~~~t-~--------------~~l~pCRvC~RvfH~~CL~r~ 47 (89)
T 1wil_A 11 PVVNDEMCDVCEVWT-A--------------ESLFPCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp CCCCSCCCTTTCCCC-S--------------SCCSSCSSSSSCCCHHHHHHH
T ss_pred CCCCCcccCcccccc-c--------------cceeccccccccccHhhcccc
Confidence 344688999996321 1 11233 8999999999996
No 82
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=87.15 E-value=0.53 Score=33.37 Aligned_cols=51 Identities=25% Similarity=0.542 Sum_probs=34.8
Q ss_pred cccCCCccccCchhhhhhhhhhccccccCceeEEeC-CCCccchhhHHHhhccC----CcccccccCcccc
Q 042810 161 LVKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMP-CHHIFHASCISRWLEEQ----NSCPMCRRQIQYE 226 (230)
Q Consensus 161 ~~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~Lp-C~H~FH~~CI~~Wl~~~----~tCP~CR~~i~~~ 226 (230)
....+..|.+|... ++ +..-. |.-.||..|+.+=+... =.||.|+..-..+
T Consensus 21 ~d~n~~~C~vC~~~--------------g~-LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~~~~k 76 (88)
T 1fp0_A 21 LDDSATICRVCQKP--------------GD-LVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPDLK 76 (88)
T ss_dssp SSSSSSCCSSSCSS--------------SC-CEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCCSSC
T ss_pred cCCCCCcCcCcCCC--------------CC-EEECCCCCCceecccCCCCCCCCcCCCcCCccccCCCccc
Confidence 34557899999873 32 33334 88999999997765432 2699998654433
No 83
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.12 E-value=0.15 Score=32.79 Aligned_cols=46 Identities=26% Similarity=0.632 Sum_probs=31.1
Q ss_pred ccCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccC----Cccccccc
Q 042810 162 VKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQ----NSCPMCRR 221 (230)
Q Consensus 162 ~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~----~tCP~CR~ 221 (230)
...+..|.||... ++-+..-.|...||..|+.+-+... =.||.|+.
T Consensus 6 ~~~~~~C~vC~~~--------------g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 6 SGHEDFCSVCRKS--------------GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp CSSCCSCSSSCCS--------------SCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCCCCccCCCC--------------CeEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 3457789999873 3223333499999999998755432 25998864
No 84
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=85.94 E-value=0.23 Score=32.85 Aligned_cols=54 Identities=17% Similarity=0.460 Sum_probs=35.1
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEeC-CCCccchhhHHHhhcc-------CCcccccccCcccc
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMP-CHHIFHASCISRWLEE-------QNSCPMCRRQIQYE 226 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~Lp-C~H~FH~~CI~~Wl~~-------~~tCP~CR~~i~~~ 226 (230)
.++..|.||....... ...+..-. |.-.||..|+.+=+.. .=.||.|+.....+
T Consensus 4 ~~~~~C~vC~~~~~~~----------~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~~~k 65 (66)
T 2yt5_A 4 GSSGVCTICQEEYSEA----------PNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTTK 65 (66)
T ss_dssp CCCCCBSSSCCCCCBT----------TBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTTSCC
T ss_pred CCCCCCCCCCCCCCCC----------CCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCccccC
Confidence 3577899998753220 23344444 9999999999874422 22699998765443
No 85
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=84.42 E-value=0.34 Score=32.18 Aligned_cols=45 Identities=38% Similarity=0.719 Sum_probs=31.4
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEe-CCCCccchhhHHHhhccC----CcccccccC
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITM-PCHHIFHASCISRWLEEQ----NSCPMCRRQ 222 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~L-pC~H~FH~~CI~~Wl~~~----~tCP~CR~~ 222 (230)
..+..|.||.+. ++ +..- .|.-.||..|+.+-+... =.||.|+..
T Consensus 6 ~~~~~C~vC~~~--------------g~-ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~ 55 (66)
T 1xwh_A 6 KNEDECAVCRDG--------------GE-LICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQA 55 (66)
T ss_dssp SCCCSBSSSSCC--------------SS-CEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHT
T ss_pred CCCCCCccCCCC--------------CC-EEEcCCCChhhcccccCCCcCcCCCCCeECccccCc
Confidence 457889999863 32 3333 499999999998655432 259999764
No 86
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=84.03 E-value=0.49 Score=33.40 Aligned_cols=56 Identities=16% Similarity=0.357 Sum_probs=34.7
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEeC-CCCccchhhHHHhhc--cCCcccccccCccccCC
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMP-CHHIFHASCISRWLE--EQNSCPMCRRQIQYEDL 228 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~Lp-C~H~FH~~CI~~Wl~--~~~tCP~CR~~i~~~~l 228 (230)
+++..|.||...-.. ....+..-. |.-.||..|+..-.. ..=.||.|+.....++|
T Consensus 23 ~~~~~C~vC~~~~s~----------~~~~ll~CD~C~~~fH~~Cl~p~~vP~g~W~C~~C~~~~~~~~~ 81 (88)
T 2l43_A 23 DEDAVCSICMDGESQ----------NSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQSRARPAL 81 (88)
T ss_dssp CCCCCCSSCCSSSSC----------SEEEEEECSSSCCCCCHHHHTCSSCCSSCCCCHHHHHHTTSCC-
T ss_pred CCCCcCCcCCCCCCC----------CCCCEEECCCCCchhhcccCCCCccCCCceECccccCccchhhh
Confidence 457899999874211 022343334 989999999975321 12259999876655543
No 87
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=83.45 E-value=0.7 Score=35.65 Aligned_cols=46 Identities=33% Similarity=0.637 Sum_probs=32.9
Q ss_pred ccCCCccccCchhhhhhhhhhccccccCceeEEeC-CCCccchhhHHHhhcc-----------CCcccccccC
Q 042810 162 VKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMP-CHHIFHASCISRWLEE-----------QNSCPMCRRQ 222 (230)
Q Consensus 162 ~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~Lp-C~H~FH~~CI~~Wl~~-----------~~tCP~CR~~ 222 (230)
+..++.|.+|.+. ++ +..-. |-..||..||.+=+.. .=.||+|+..
T Consensus 60 Dg~~d~C~vC~~G--------------G~-LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~ 117 (142)
T 2lbm_A 60 DGMDEQCRWCAEG--------------GN-LICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPE 117 (142)
T ss_dssp TSCBCSCSSSCCC--------------SS-EEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCC
T ss_pred CCCCCeecccCCC--------------Cc-EEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCc
Confidence 4457889999984 33 44444 9999999999976531 2269999753
No 88
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=83.32 E-value=0.2 Score=34.06 Aligned_cols=51 Identities=22% Similarity=0.433 Sum_probs=33.3
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeC-CCCccchhhHHHhhcc----CCcccccccCcccc
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMP-CHHIFHASCISRWLEE----QNSCPMCRRQIQYE 226 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~Lp-C~H~FH~~CI~~Wl~~----~~tCP~CR~~i~~~ 226 (230)
+...|.||.... . +...+.-. |.-.||..|+..-... .-.||.|+..+...
T Consensus 17 ~~~~C~~C~~~~-~-----------~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~~k~ 72 (75)
T 2k16_A 17 QIWICPGCNKPD-D-----------GSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKIKKD 72 (75)
T ss_dssp EEECBTTTTBCC-S-----------SCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHHCSC
T ss_pred CCcCCCCCCCCC-C-----------CCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCchhhc
Confidence 345699997653 1 32333334 9999999999765432 23699998876543
No 89
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=82.47 E-value=0.92 Score=34.41 Aligned_cols=45 Identities=33% Similarity=0.623 Sum_probs=30.8
Q ss_pred ccCCCccccCchhhhhhhhhhccccccCceeEEeC-CCCccchhhHHHhh------cc-----CCccccccc
Q 042810 162 VKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMP-CHHIFHASCISRWL------EE-----QNSCPMCRR 221 (230)
Q Consensus 162 ~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~Lp-C~H~FH~~CI~~Wl------~~-----~~tCP~CR~ 221 (230)
+..++.|.||.+. -++..=. |-..||..||.+-+ +. .=.|++|+.
T Consensus 54 Dg~~~~C~vC~dG---------------G~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~ 110 (129)
T 3ql9_A 54 DGMDEQCRWCAEG---------------GNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHP 110 (129)
T ss_dssp TSCBSSCTTTCCC---------------SEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCC
T ss_pred CCCCCcCeecCCC---------------CeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCC
Confidence 4456789999973 2333334 89999999999742 11 126999965
No 90
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=81.88 E-value=0.35 Score=35.29 Aligned_cols=49 Identities=18% Similarity=0.472 Sum_probs=30.9
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEe-CCCCccchhhHHHhh----------ccCCcccccccCc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITM-PCHHIFHASCISRWL----------EEQNSCPMCRRQI 223 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~L-pC~H~FH~~CI~~Wl----------~~~~tCP~CR~~i 223 (230)
...|+||...+.++ +..+..= .|.-.||..|+.-=- ..+-.||.|+..-
T Consensus 3 ~~~C~iC~~p~~~~----------~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~ 62 (105)
T 2xb1_A 3 VYPCGACRSEVNDD----------QDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTK 62 (105)
T ss_dssp CCBCTTTCSBCCTT----------SCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTT
T ss_pred cCCCCCCCCccCCC----------CCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcC
Confidence 45799999887541 2333332 489999999984210 0233699997643
No 91
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=81.61 E-value=0.24 Score=34.61 Aligned_cols=60 Identities=13% Similarity=0.308 Sum_probs=41.1
Q ss_pred cccCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhh--------ccCCcccccccCccccCCCC
Q 042810 161 LVKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWL--------EEQNSCPMCRRQIQYEDLVG 230 (230)
Q Consensus 161 ~~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl--------~~~~tCP~CR~~i~~~~l~~ 230 (230)
.+.+...|.+|...|... ..+-..-.||++||..|..... +..+.|-.|-..+...+++|
T Consensus 17 pd~~~~~C~~C~~~Fs~~----------~RrHHCR~CG~v~C~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~~~~~~ 84 (84)
T 1z2q_A 17 EDEDAPACNGCGCVFTTT----------VRRHHCRNCGYVLCGDCSRHRAAIPMRGITEPERVCDACYLALRSSNMAG 84 (84)
T ss_dssp CTTTCCBCTTTCCBCCTT----------SCCEECTTTCCEECTGGGCCEEEETTTTEEEEEECCHHHHHHHHTSCCCC
T ss_pred cCCCCCCCcCcCCccccc----------hhcccccCCCcEEChHHhCCeEeccCCCCCCCCEECHHHHHHHhhcccCC
Confidence 344567899999998661 2223333599999999987653 22356888877777776654
No 92
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=80.20 E-value=0.69 Score=33.72 Aligned_cols=38 Identities=26% Similarity=0.517 Sum_probs=26.1
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhc
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLE 211 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~ 211 (230)
.+++.|.||.+.-+. .+-+.--.|...||..|+..++.
T Consensus 5 ~~~~~C~~C~~~g~~-----------~~ll~C~~C~~~~H~~Cl~~~~~ 42 (111)
T 2ysm_A 5 SSGANCAVCDSPGDL-----------LDQFFCTTCGQHYHGMCLDIAVT 42 (111)
T ss_dssp CCCSCBTTTCCCCCT-----------TTSEECSSSCCEECTTTTTCCCC
T ss_pred CCCCCCcCCCCCCCC-----------cCCeECCCCCCCcChHHhCCccc
Confidence 457889999875211 11233345999999999988764
No 93
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=79.81 E-value=0.71 Score=28.76 Aligned_cols=30 Identities=37% Similarity=0.741 Sum_probs=20.6
Q ss_pred eEEeC-CCCccchhhHHHhhccC----Cccccccc
Q 042810 192 LITMP-CHHIFHASCISRWLEEQ----NSCPMCRR 221 (230)
Q Consensus 192 v~~Lp-C~H~FH~~CI~~Wl~~~----~tCP~CR~ 221 (230)
+..-. |...||..|+.+=+... =.||.|+.
T Consensus 15 ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 15 LILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred EEECCCCChhhCcccCCCCcCCCCCCcEECcCccc
Confidence 33334 99999999997644332 25999975
No 94
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.02 E-value=0.67 Score=32.93 Aligned_cols=47 Identities=26% Similarity=0.447 Sum_probs=31.0
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEeC-CCCccchhhHHHhhccC----Cccccccc
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMP-CHHIFHASCISRWLEEQ----NSCPMCRR 221 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~Lp-C~H~FH~~CI~~Wl~~~----~tCP~CR~ 221 (230)
.++..|.||...-.. ..+..-. |...||..|+.+=+... =.||.|+.
T Consensus 14 ~~~~~C~vC~~~~~~------------~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~ 65 (92)
T 2e6r_A 14 IDSYICQVCSRGDED------------DKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCIL 65 (92)
T ss_dssp CCCCCCSSSCCSGGG------------GGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHH
T ss_pred cCCCCCccCCCcCCC------------CCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcC
Confidence 346689999875321 2244444 99999999998544322 25999975
No 95
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=74.46 E-value=2.1 Score=29.21 Aligned_cols=48 Identities=23% Similarity=0.483 Sum_probs=28.8
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhc-----cCCcccccccCc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLE-----EQNSCPMCRRQI 223 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~-----~~~tCP~CR~~i 223 (230)
..-| ||...+.+ .+..+..--|...||..|+.---. ..-.||.|+..-
T Consensus 12 ~~~C-~C~~~~d~----------~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 12 PVYC-LCRQPYNV----------NHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCS-TTSCSCCS----------SSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred ccEE-EcCCccCC----------CCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccccc
Confidence 3445 88776532 022333334999999999942211 234799998753
No 96
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=73.93 E-value=0.92 Score=30.51 Aligned_cols=31 Identities=29% Similarity=0.679 Sum_probs=21.2
Q ss_pred eEEeC-CCCccchhhHHHhhcc-----CCcccccccC
Q 042810 192 LITMP-CHHIFHASCISRWLEE-----QNSCPMCRRQ 222 (230)
Q Consensus 192 v~~Lp-C~H~FH~~CI~~Wl~~-----~~tCP~CR~~ 222 (230)
+..-. |...||..|+.+=|.. .=.||.|+.+
T Consensus 33 ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 33 QLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 69 (70)
T ss_dssp EEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSCC
T ss_pred EEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccCc
Confidence 43334 9999999999854432 2269999753
No 97
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=73.75 E-value=1.4 Score=32.22 Aligned_cols=44 Identities=23% Similarity=0.558 Sum_probs=28.3
Q ss_pred ccccCchhhhhhhhhhccccccCceeEEeC-CCCccchhhHHHhhccC----Cccccccc
Q 042810 167 NCAVCLEELIAKEEIKGQTTEKKTQLITMP-CHHIFHASCISRWLEEQ----NSCPMCRR 221 (230)
Q Consensus 167 ~C~ICle~~~~~~~~~~~~~~~~~~v~~Lp-C~H~FH~~CI~~Wl~~~----~tCP~CR~ 221 (230)
.|.||.+.-.+ ...+..-. |...||..|+++-+..- =.||.||.
T Consensus 63 ~C~vC~~~~~~-----------~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 63 TCSSCRDQGKN-----------ADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp CBTTTCCCCCT-----------TCCCEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred ccccccCcCCC-----------ccceEEcCCCCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 57788753111 22343334 99999999998755432 26999975
No 98
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.60 E-value=0.99 Score=31.00 Aligned_cols=45 Identities=22% Similarity=0.538 Sum_probs=28.1
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeC-CCCccchhhHHHhhcc-----CCccccccc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMP-CHHIFHASCISRWLEE-----QNSCPMCRR 221 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~Lp-C~H~FH~~CI~~Wl~~-----~~tCP~CR~ 221 (230)
+..|.||...-. +..+..-. |...||..|+.+=|.. .=.||.|+.
T Consensus 26 ~c~C~vC~~~~~------------~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 26 SCSCRVCGGKHE------------PNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSSCSSSCCCCC------------STTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCCCcCcCCcCC------------CCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 347788875311 22243444 9999999999854432 125999975
No 99
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.56 E-value=1.2 Score=24.22 Aligned_cols=19 Identities=21% Similarity=0.239 Sum_probs=14.9
Q ss_pred ccCCCCccccccccceeee
Q 042810 14 SCSNNPLMCPVGNIGIVLK 32 (230)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~ 32 (230)
.....||.|++|...|-..
T Consensus 4 ~~~~k~~~C~~C~k~f~~~ 22 (36)
T 2els_A 4 GSSGKIFTCEYCNKVFKFK 22 (36)
T ss_dssp TSCCCCEECTTTCCEESSH
T ss_pred CCCCCCEECCCCCceeCCH
Confidence 3456899999999988643
No 100
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.28 E-value=1.6 Score=23.67 Aligned_cols=18 Identities=17% Similarity=0.233 Sum_probs=14.5
Q ss_pred cCCCCccccccccceeee
Q 042810 15 CSNNPLMCPVGNIGIVLK 32 (230)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~ 32 (230)
....||+|++|...|...
T Consensus 5 ~~~~~~~C~~C~k~f~~~ 22 (36)
T 2elr_A 5 SSGKTHLCDMCGKKFKSK 22 (36)
T ss_dssp CCCSSCBCTTTCCBCSSH
T ss_pred CCCCCeecCcCCCCcCch
Confidence 456899999999988654
No 101
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=70.53 E-value=2.2 Score=37.90 Aligned_cols=51 Identities=20% Similarity=0.477 Sum_probs=34.0
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhc---c--CCcccccccCccccCCC
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLE---E--QNSCPMCRRQIQYEDLV 229 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~---~--~~tCP~CR~~i~~~~l~ 229 (230)
...|++=...+. ..++-..|.|.-|.+ +..||. + .-.||+|.+.+..++|+
T Consensus 249 SL~CPlS~~ri~-------------~PvRg~~C~HlQCFD-l~sfL~~~~~~~~W~CPIC~k~~~~~dL~ 304 (371)
T 3i2d_A 249 SLQCPISYTRMK-------------YPSKSINCKHLQCFD-ALWFLHSQLQIPTWQCPVCQIDIALENLA 304 (371)
T ss_dssp ESBCTTTSSBCS-------------SEEEETTCCSSCCEE-HHHHHHHHHHSCCCBCTTTCCBCCGGGEE
T ss_pred eecCCCcccccc-------------ccCcCCcCCCcceEC-HHHHHHHhhcCCceeCCCCCcccCHHHee
Confidence 467888777663 345556699985544 334443 2 23799999999888764
No 102
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=70.06 E-value=2.4 Score=37.58 Aligned_cols=51 Identities=22% Similarity=0.492 Sum_probs=33.6
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhc---c--CCcccccccCccccCCC
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLE---E--QNSCPMCRRQIQYEDLV 229 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~---~--~~tCP~CR~~i~~~~l~ 229 (230)
...|+|=...+. ..++-..|.|.-|.+ +..|+. + .-.||+|.+.+..++|.
T Consensus 215 SL~CPlS~~ri~-------------~P~Rg~~C~HlqCFD-l~sfL~~~~~~~~W~CPiC~k~~~~~dL~ 270 (360)
T 4fo9_A 215 SLMCPLGKMRLT-------------IPCRAVTCTHLQCFD-AALYLQMNEKKPTWICPVCDKKAAYESLI 270 (360)
T ss_dssp ESBCTTTCSBCS-------------SEEEETTCCCCCCEE-HHHHHHHHHHSCCCBCTTTCSBCCGGGEE
T ss_pred eeeCCCccceec-------------cCCcCCCCCCCccCC-HHHHHHHHhhCCCeECCCCCcccCHHHeE
Confidence 457888777663 345556699984444 334442 2 23799999999888763
No 103
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=70.03 E-value=1.6 Score=31.21 Aligned_cols=26 Identities=19% Similarity=0.445 Sum_probs=19.0
Q ss_pred CCCCccchhhHHHhhcc---CCccccccc
Q 042810 196 PCHHIFHASCISRWLEE---QNSCPMCRR 221 (230)
Q Consensus 196 pC~H~FH~~CI~~Wl~~---~~tCP~CR~ 221 (230)
.|.-.||..|+..=... .-.||.|+.
T Consensus 47 ~C~~w~H~~C~~~~~~~~p~~w~C~~C~~ 75 (98)
T 2lv9_A 47 KCSVWQHIDCMGIDRQHIPDTYLCERCQP 75 (98)
T ss_dssp TTCBEEETTTTTCCTTSCCSSBCCTTTSS
T ss_pred CCCCcCcCcCCCCCccCCCCCEECCCCcC
Confidence 49999999999753221 236999974
No 104
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=69.67 E-value=1.8 Score=34.65 Aligned_cols=52 Identities=17% Similarity=0.392 Sum_probs=32.3
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHh------hc-----cCCcccccccCc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRW------LE-----EQNSCPMCRRQI 223 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~W------l~-----~~~tCP~CR~~i 223 (230)
+..|+||...+.+++. ...-+..--|...||..|+.-= +. ..-.||.|+..-
T Consensus 2 G~~CpiC~k~Y~~~~~-------~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~ 64 (183)
T 3lqh_A 2 GNFCPLCDKCYDDDDY-------ESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERH 64 (183)
T ss_dssp CCBCTTTCCBCTTCCT-------TCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSS
T ss_pred cCcCCCCcCccCCccc-------CCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCC
Confidence 4579999988866110 0112222349999999998421 11 144899998754
No 105
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=67.64 E-value=1.7 Score=22.00 Aligned_cols=15 Identities=27% Similarity=0.523 Sum_probs=12.4
Q ss_pred CCccccccccceeee
Q 042810 18 NPLMCPVGNIGIVLK 32 (230)
Q Consensus 18 ~~~~~~~~~~~~~~~ 32 (230)
.||.|++|...|...
T Consensus 2 k~~~C~~C~k~f~~~ 16 (27)
T 2kvg_A 2 APYRCPLCRAGCPSL 16 (27)
T ss_dssp CTEEETTTTEEESCH
T ss_pred cCcCCCCCCcccCCH
Confidence 589999999988643
No 106
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=67.11 E-value=2.2 Score=21.39 Aligned_cols=14 Identities=14% Similarity=0.219 Sum_probs=11.9
Q ss_pred CCccccccccceee
Q 042810 18 NPLMCPVGNIGIVL 31 (230)
Q Consensus 18 ~~~~~~~~~~~~~~ 31 (230)
.||.|+.|...|..
T Consensus 2 k~~~C~~C~k~f~~ 15 (27)
T 2kvh_A 2 KPFSCSLCPQRSRD 15 (27)
T ss_dssp CCEECSSSSCEESS
T ss_pred cCccCCCcChhhCC
Confidence 58999999998864
No 107
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=66.76 E-value=3 Score=27.52 Aligned_cols=34 Identities=21% Similarity=0.595 Sum_probs=22.6
Q ss_pred cCCCccccCchhhhhhhhhhccccccCce-eEEe-CCCCccchhhHH
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQ-LITM-PCHHIFHASCIS 207 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~-v~~L-pC~H~FH~~CI~ 207 (230)
.....|++|...+.+ +.. +..- .|.-.||..|+.
T Consensus 6 ~~~~~C~~C~~p~~~-----------~~~mI~CD~~C~~WfH~~Cvg 41 (65)
T 2vpb_A 6 DPVYPCGICTNEVND-----------DQDAILCEASCQKWFHRICTG 41 (65)
T ss_dssp ---CBCTTTCSBCCT-----------TSCEEEBTTTTCCEEEHHHHT
T ss_pred CCcCcCccCCCccCC-----------CCCeEecccCccccCchhccC
Confidence 446789999988754 333 3333 589999999983
No 108
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=66.09 E-value=0.69 Score=34.08 Aligned_cols=49 Identities=20% Similarity=0.468 Sum_probs=30.1
Q ss_pred ccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccC----CcccccccCcccc
Q 042810 167 NCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQ----NSCPMCRRQIQYE 226 (230)
Q Consensus 167 ~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~----~tCP~CR~~i~~~ 226 (230)
.|.||...-.. ++-+.--.|...||..|+.+=+... =.||.|+.....+
T Consensus 60 ~C~~C~~~~~~-----------~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~~~~~k 112 (114)
T 2kwj_A 60 SCILCGTSEND-----------DQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWELLKEK 112 (114)
T ss_dssp CCTTTTCCTTT-----------TTEEECSSSCCEEETTTSSSCCSSCCSSCCCCHHHHHHHHHT
T ss_pred ccCcccccCCC-----------CceEEcCCCCccccccccCCCccCCCCCCeECccccchhhcc
Confidence 57888664211 2223333499999999998644332 2599997765443
No 109
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=65.65 E-value=2.2 Score=21.44 Aligned_cols=15 Identities=33% Similarity=0.541 Sum_probs=12.5
Q ss_pred CCccccccccceeee
Q 042810 18 NPLMCPVGNIGIVLK 32 (230)
Q Consensus 18 ~~~~~~~~~~~~~~~ 32 (230)
.||.|++|.+.|...
T Consensus 2 k~~~C~~C~k~f~~~ 16 (28)
T 2kvf_A 2 RPYSCSVCGKRFSLK 16 (28)
T ss_dssp CSEECSSSCCEESCH
T ss_pred cCccCCCCCcccCCH
Confidence 589999999988654
No 110
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=65.57 E-value=2.2 Score=21.39 Aligned_cols=15 Identities=13% Similarity=0.149 Sum_probs=11.8
Q ss_pred CCccccccccceeee
Q 042810 18 NPLMCPVGNIGIVLK 32 (230)
Q Consensus 18 ~~~~~~~~~~~~~~~ 32 (230)
.||.|+.|...|...
T Consensus 1 k~~~C~~C~~~f~~~ 15 (29)
T 2m0e_A 1 KEHKCPHCDKKFNQV 15 (29)
T ss_dssp CCCCCSSCCCCCCTT
T ss_pred CCCcCCCCCcccCCH
Confidence 489999999888643
No 111
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.47 E-value=2.6 Score=22.64 Aligned_cols=17 Identities=29% Similarity=0.593 Sum_probs=13.9
Q ss_pred CCCCccccccccceeee
Q 042810 16 SNNPLMCPVGNIGIVLK 32 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~ 32 (230)
...||.|++|...|...
T Consensus 6 ~~k~~~C~~C~k~f~~~ 22 (36)
T 2elt_A 6 SGKPYKCPQCSYASAIK 22 (36)
T ss_dssp CCCSEECSSSSCEESSH
T ss_pred CCCCCCCCCCCcccCCH
Confidence 46799999999988654
No 112
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=65.29 E-value=1.4 Score=30.21 Aligned_cols=25 Identities=36% Similarity=0.800 Sum_probs=18.6
Q ss_pred CCCccchhhHHHhhccC-----Cccccccc
Q 042810 197 CHHIFHASCISRWLEEQ-----NSCPMCRR 221 (230)
Q Consensus 197 C~H~FH~~CI~~Wl~~~-----~tCP~CR~ 221 (230)
|...||..|+.+-|... =.||.|+.
T Consensus 47 C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 47 CDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp TCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred CCCccCcccCCCcccCCCCCCceECcCccc
Confidence 99999999999755431 26999975
No 113
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=65.18 E-value=2.3 Score=21.39 Aligned_cols=15 Identities=13% Similarity=0.350 Sum_probs=12.0
Q ss_pred CCccccccccceeee
Q 042810 18 NPLMCPVGNIGIVLK 32 (230)
Q Consensus 18 ~~~~~~~~~~~~~~~ 32 (230)
.||.|++|...|...
T Consensus 1 k~~~C~~C~~~f~~~ 15 (29)
T 1ard_A 1 RSFVCEVCTRAFARQ 15 (29)
T ss_dssp CCCBCTTTCCBCSSH
T ss_pred CCeECCCCCcccCCH
Confidence 489999999988643
No 114
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=68.55 E-value=1.3 Score=22.03 Aligned_cols=17 Identities=18% Similarity=0.372 Sum_probs=13.2
Q ss_pred CCccccccccceeeeee
Q 042810 18 NPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 18 ~~~~~~~~~~~~~~~~~ 34 (230)
.||.|++|...|...-.
T Consensus 1 kp~~C~~C~k~f~~~~~ 17 (26)
T 2lvu_A 1 KPYVCERCGKRFVQSSQ 17 (26)
Confidence 48999999998876443
No 115
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=64.55 E-value=2.9 Score=26.14 Aligned_cols=43 Identities=21% Similarity=0.377 Sum_probs=26.1
Q ss_pred ccccCchhhhhhhhhhccccccCc-eeEEe-CCCCccchhhHHHhh----ccCCcccccc
Q 042810 167 NCAVCLEELIAKEEIKGQTTEKKT-QLITM-PCHHIFHASCISRWL----EEQNSCPMCR 220 (230)
Q Consensus 167 ~C~ICle~~~~~~~~~~~~~~~~~-~v~~L-pC~H~FH~~CI~~Wl----~~~~tCP~CR 220 (230)
.|.+|...+.+ +. -+..- .|.-.||..|+.--- ..+-.||.|+
T Consensus 4 ~cc~C~~p~~~-----------~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKD-----------KVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCT-----------TCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccCC-----------CCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 57788776533 22 23333 488899999985321 2345788885
No 116
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=64.24 E-value=2.7 Score=22.85 Aligned_cols=17 Identities=18% Similarity=0.380 Sum_probs=14.0
Q ss_pred CCCCccccccccceeee
Q 042810 16 SNNPLMCPVGNIGIVLK 32 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~ 32 (230)
...||.|++|...|...
T Consensus 8 ~~k~~~C~~C~k~f~~~ 24 (37)
T 1p7a_A 8 GIKPFQCPDCDRSFSRS 24 (37)
T ss_dssp CSSSBCCTTTCCCBSSH
T ss_pred CCCCccCCCCCcccCcH
Confidence 46799999999998653
No 117
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=64.06 E-value=2.8 Score=22.30 Aligned_cols=17 Identities=12% Similarity=0.198 Sum_probs=14.1
Q ss_pred CCCCccccccccceeee
Q 042810 16 SNNPLMCPVGNIGIVLK 32 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~ 32 (230)
...||.|++|...|...
T Consensus 4 ~~k~~~C~~C~k~f~~~ 20 (35)
T 2elx_A 4 GSSGYVCALCLKKFVSS 20 (35)
T ss_dssp CCCSEECSSSCCEESSH
T ss_pred CCCCeECCCCcchhCCH
Confidence 46799999999998754
No 118
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=63.69 E-value=2.2 Score=35.39 Aligned_cols=27 Identities=33% Similarity=0.785 Sum_probs=16.8
Q ss_pred CCCCccchhhHHHhhcc-----CCcccccccC
Q 042810 196 PCHHIFHASCISRWLEE-----QNSCPMCRRQ 222 (230)
Q Consensus 196 pC~H~FH~~CI~~Wl~~-----~~tCP~CR~~ 222 (230)
.|...||..|+.+=+.. .=.||.|+.+
T Consensus 194 ~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~~ 225 (226)
T 3ask_A 194 ECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 225 (226)
T ss_dssp SSCCEECSCC--CCCCSCCSSSCCCCGGGC--
T ss_pred CCCcceeCccCCCCcccCCCCCCCCCcCCcCc
Confidence 49999999999854432 1259999753
No 119
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=63.65 E-value=8.6 Score=27.95 Aligned_cols=46 Identities=22% Similarity=0.501 Sum_probs=29.3
Q ss_pred ccCCCccccCchhhhhhhhhhccccccCceeEEe---CCCCccchhhHHHhhccCC----cccccccCcc
Q 042810 162 VKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITM---PCHHIFHASCISRWLEEQN----SCPMCRRQIQ 224 (230)
Q Consensus 162 ~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~L---pC~H~FH~~CI~~Wl~~~~----tCP~CR~~i~ 224 (230)
...++.|.+|.+. ++ +..- .|-..||..|+. |.... .||.|+-.+.
T Consensus 12 ~~~~~~C~~C~~~--------------G~-ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c~C~~C 64 (107)
T 4gne_A 12 QMHEDYCFQCGDG--------------GE-LVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQCDEC 64 (107)
T ss_dssp CSSCSSCTTTCCC--------------SE-EEECCSTTCCCEECTGGGT--CSSCCSSCCCCGGGBCTTT
T ss_pred CCCCCCCCcCCCC--------------Cc-EeEECCCCCCcccccccCc--CCcCCCCCEECCCCCCCcC
Confidence 3467889999842 33 3333 388999999997 44321 4887765443
No 120
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.53 E-value=3 Score=22.55 Aligned_cols=18 Identities=22% Similarity=0.421 Sum_probs=14.6
Q ss_pred CCCCccccccccceeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQ 33 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~ 33 (230)
...||.|++|...|...-
T Consensus 6 ~~k~~~C~~C~k~f~~~~ 23 (36)
T 2elq_A 6 SGKPFKCSLCEYATRSKS 23 (36)
T ss_dssp CCCSEECSSSSCEESCHH
T ss_pred CCCCccCCCCCchhCCHH
Confidence 467999999999987543
No 121
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=63.51 E-value=1.9 Score=31.47 Aligned_cols=31 Identities=19% Similarity=0.440 Sum_probs=20.5
Q ss_pred eEEeCCCCccchhhHHHhhccCCcccccccCccccC
Q 042810 192 LITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYED 227 (230)
Q Consensus 192 v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~~ 227 (230)
.+...||+.| ..=+.....||.|+.+.-.+.
T Consensus 68 ~~C~~CG~~F-----~~~~~kPsrCP~CkSe~Ie~P 98 (105)
T 2gmg_A 68 AQCRKCGFVF-----KAEINIPSRCPKCKSEWIEEP 98 (105)
T ss_dssp CBBTTTCCBC-----CCCSSCCSSCSSSCCCCBCCC
T ss_pred cChhhCcCee-----cccCCCCCCCcCCCCCccCCc
Confidence 3445699999 122345678999998765543
No 122
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=62.88 E-value=2.5 Score=20.99 Aligned_cols=14 Identities=21% Similarity=0.313 Sum_probs=10.5
Q ss_pred Cccccccccceeee
Q 042810 19 PLMCPVGNIGIVLK 32 (230)
Q Consensus 19 ~~~~~~~~~~~~~~ 32 (230)
||.|++|.+.|...
T Consensus 1 ~~~C~~C~k~f~~~ 14 (27)
T 1znf_A 1 XYKCGLCERSFVEK 14 (27)
T ss_dssp -CBCSSSCCBCSSH
T ss_pred CccCCCCCCcCCCH
Confidence 68899999888653
No 123
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=62.79 E-value=2.5 Score=21.34 Aligned_cols=16 Identities=13% Similarity=0.250 Sum_probs=12.5
Q ss_pred CCccccccccceeeee
Q 042810 18 NPLMCPVGNIGIVLKQ 33 (230)
Q Consensus 18 ~~~~~~~~~~~~~~~~ 33 (230)
.||.|+.|...|...-
T Consensus 1 k~~~C~~C~k~f~~~~ 16 (29)
T 1rik_A 1 YKFACPECPKRFMRSD 16 (29)
T ss_dssp CCEECSSSSCEESCSH
T ss_pred CCccCCCCCchhCCHH
Confidence 3899999999886543
No 124
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=62.56 E-value=2.9 Score=28.14 Aligned_cols=51 Identities=18% Similarity=0.447 Sum_probs=31.8
Q ss_pred cccCCCccccCchhhhhhhhhhccccccCceeEEeC-CCCccchhhHHHhhcc--CCccccccc
Q 042810 161 LVKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMP-CHHIFHASCISRWLEE--QNSCPMCRR 221 (230)
Q Consensus 161 ~~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~Lp-C~H~FH~~CI~~Wl~~--~~tCP~CR~ 221 (230)
....+..|.||.+.-.. ....+..-. |.-.||..|+..-..- .=.||.|+.
T Consensus 12 ~~~~~~~C~vC~~~~s~----------~~~~ll~CD~C~~~~H~~Cl~~~~vP~g~W~C~~C~~ 65 (71)
T 2ku3_A 12 LIDEDAVCSICMDGESQ----------NSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQ 65 (71)
T ss_dssp CCCSSCSCSSSCCCCCC----------SSSCEEECSSSCCEEEHHHHTCSSCCSSCCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCC----------CCCCEEECCCCCCccccccCCCCcCCCCCcCCccCcC
Confidence 34457889999875211 023344444 9999999999753211 125998865
No 125
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.68 E-value=3.4 Score=22.30 Aligned_cols=18 Identities=11% Similarity=0.017 Sum_probs=14.4
Q ss_pred cCCCCccccccccceeee
Q 042810 15 CSNNPLMCPVGNIGIVLK 32 (230)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~ 32 (230)
....||.|++|...|...
T Consensus 5 ~~~k~~~C~~C~k~f~~~ 22 (36)
T 2elv_A 5 SSGLLYDCHICERKFKNE 22 (36)
T ss_dssp CCCCCEECSSSCCEESSH
T ss_pred CCCCCeECCCCCCccCCH
Confidence 346799999999988654
No 126
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=60.69 E-value=2.2 Score=28.87 Aligned_cols=46 Identities=22% Similarity=0.491 Sum_probs=28.1
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhh---------ccCCcccccccC
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWL---------EEQNSCPMCRRQ 222 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl---------~~~~tCP~CR~~ 222 (230)
..-| ||...... +..+..-.|...||..|+.--. ..+-.||.|+..
T Consensus 16 ~~~C-~C~~~~~~-----------~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~ 70 (76)
T 1wem_A 16 ALYC-ICRQPHNN-----------RFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTIL 70 (76)
T ss_dssp CCCS-TTCCCCCS-----------SCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHH
T ss_pred CCEE-ECCCccCC-----------CCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCc
Confidence 3445 88765422 2333333499999999994211 135579999764
No 127
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=60.42 E-value=3.2 Score=26.57 Aligned_cols=17 Identities=18% Similarity=0.264 Sum_probs=10.6
Q ss_pred CCCCccccccccceeee
Q 042810 16 SNNPLMCPVGNIGIVLK 32 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~ 32 (230)
|..||.|++|.+.|...
T Consensus 1 SEKpy~C~~C~k~F~~~ 17 (60)
T 4gzn_C 1 SERPFFCNFCGKTYRDA 17 (60)
T ss_dssp CCCCEECTTTCCEESSH
T ss_pred CCCCccCCCCCCEeCCH
Confidence 44667777777666543
No 128
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=60.11 E-value=2.7 Score=27.98 Aligned_cols=46 Identities=24% Similarity=0.528 Sum_probs=28.1
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhc---cCCccccccc
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLE---EQNSCPMCRR 221 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~---~~~tCP~CR~ 221 (230)
+...| ||...... +..+..-.|...||..|+.---. .+-.||.|+.
T Consensus 18 ~~~~C-iC~~~~~~-----------~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~~ 66 (68)
T 3o70_A 18 GLVTC-FCMKPFAG-----------RPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 66 (68)
T ss_dssp TCCCS-TTCCCCTT-----------CCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHHT
T ss_pred CceEe-ECCCcCCC-----------CCEEECCCCCccccccccCcCcccCCCcEECCCCCC
Confidence 45567 89765421 22333334999999999954221 2346999975
No 129
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.30 E-value=3.9 Score=22.20 Aligned_cols=17 Identities=18% Similarity=0.415 Sum_probs=14.2
Q ss_pred CCCCccccccccceeee
Q 042810 16 SNNPLMCPVGNIGIVLK 32 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~ 32 (230)
...||.|++|...|...
T Consensus 6 ~~k~~~C~~C~k~f~~~ 22 (37)
T 2elp_A 6 SGRAMKCPYCDFYFMKN 22 (37)
T ss_dssp CCCCEECSSSSCEECSS
T ss_pred CCCCeECCCCChhhccC
Confidence 46799999999998754
No 130
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=58.40 E-value=3 Score=22.12 Aligned_cols=17 Identities=12% Similarity=0.280 Sum_probs=13.2
Q ss_pred CCccccccccceeeeee
Q 042810 18 NPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 18 ~~~~~~~~~~~~~~~~~ 34 (230)
.||.|++|.+.|...-.
T Consensus 1 kp~~C~~C~k~f~~~~~ 17 (32)
T 2kfq_A 1 YAFACPACPKRFMRSDA 17 (32)
T ss_dssp CCSSSSSSCTTHHHHHT
T ss_pred CCCCCCCCCcccCCHHH
Confidence 48999999998875433
No 131
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=58.36 E-value=3.5 Score=30.14 Aligned_cols=40 Identities=15% Similarity=0.310 Sum_probs=23.4
Q ss_pred CccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHh
Q 042810 166 DNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRW 209 (230)
Q Consensus 166 ~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~W 209 (230)
+.|.||+..-.. ....+..++-+.--.|+..||..|+..+
T Consensus 2 ~~C~~C~~~~~~----n~k~g~~~~Li~C~~C~~~~H~~Cl~~~ 41 (114)
T 2kwj_A 2 SYCDFCLGGSNM----NKKSGRPEELVSCADCGRSGHPTCLQFT 41 (114)
T ss_dssp CCCSSSCCBTTB----CTTTCCCCCCEECSSSCCEECTTTTTCC
T ss_pred CcCccCCCCccc----cccCCCCCCCeEeCCCCCccchhhCCCh
Confidence 468999775311 0011112333444459999999999865
No 132
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=57.81 E-value=2.4 Score=33.18 Aligned_cols=47 Identities=19% Similarity=0.485 Sum_probs=28.9
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhh-----ccCCccccccc
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWL-----EEQNSCPMCRR 221 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl-----~~~~tCP~CR~ 221 (230)
+...| ||.....+ .+.-+..=.|...||..|+.--- ...-.||.|+.
T Consensus 7 ~~~~C-~C~~~~~~----------~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~ 58 (174)
T 2ri7_A 7 TKLYC-ICKTPEDE----------SKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQS 58 (174)
T ss_dssp CCEET-TTTEECCT----------TSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHH
T ss_pred CCcEe-eCCCCCCC----------CCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcc
Confidence 35568 99876432 02223333499999999995321 12347999976
No 133
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=57.62 E-value=1.9 Score=30.21 Aligned_cols=50 Identities=30% Similarity=0.702 Sum_probs=32.7
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeC-CCCccchhhHHHhhcc--------CCcccccccCc
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMP-CHHIFHASCISRWLEE--------QNSCPMCRRQI 223 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~Lp-C~H~FH~~CI~~Wl~~--------~~tCP~CR~~i 223 (230)
.+..|.||...-.. ....+..-. |...||..|+.+-+.. .=.||.|+...
T Consensus 15 ~~~~C~vC~~~~~~----------~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~ 73 (88)
T 1wev_A 15 MGLACVVCRQMTVA----------SGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQM 73 (88)
T ss_dssp HCCSCSSSCCCCCC----------TTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHH
T ss_pred CCCcCCCCCCCCCC----------CCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccchh
Confidence 36789999875221 012344444 9999999999876542 12699997644
No 134
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=57.30 E-value=4.2 Score=21.66 Aligned_cols=18 Identities=17% Similarity=0.423 Sum_probs=14.3
Q ss_pred CCCCccccccccceeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQ 33 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~ 33 (230)
...||.|++|...|...-
T Consensus 4 ~~k~~~C~~C~k~f~~~~ 21 (35)
T 1srk_A 4 GKRPFVCRICLSAFTTKA 21 (35)
T ss_dssp CCSCEECSSSCCEESSHH
T ss_pred CCcCeeCCCCCcccCCHH
Confidence 357999999999986543
No 135
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=57.26 E-value=3.4 Score=22.11 Aligned_cols=15 Identities=13% Similarity=0.246 Sum_probs=12.1
Q ss_pred CCccccccccceeee
Q 042810 18 NPLMCPVGNIGIVLK 32 (230)
Q Consensus 18 ~~~~~~~~~~~~~~~ 32 (230)
.||.|++|.+.|...
T Consensus 1 kp~~C~~C~k~F~~~ 15 (33)
T 1rim_A 1 YKFACPECPKRFMRS 15 (33)
T ss_dssp CCCCCSSSCCCCSSH
T ss_pred CcccCCCCCchhCCH
Confidence 389999999988653
No 136
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=57.14 E-value=3.7 Score=20.59 Aligned_cols=15 Identities=13% Similarity=0.200 Sum_probs=12.3
Q ss_pred CCccccccccceeee
Q 042810 18 NPLMCPVGNIGIVLK 32 (230)
Q Consensus 18 ~~~~~~~~~~~~~~~ 32 (230)
.||.|+.|...|...
T Consensus 2 k~~~C~~C~~~f~~~ 16 (30)
T 2m0d_A 2 KPYQCDYCGRSFSDP 16 (30)
T ss_dssp CCEECTTTCCEESCH
T ss_pred cCccCCCCCcccCCH
Confidence 589999999988653
No 137
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=57.04 E-value=3 Score=23.95 Aligned_cols=17 Identities=18% Similarity=0.235 Sum_probs=14.1
Q ss_pred CCCCccccccccceeee
Q 042810 16 SNNPLMCPVGNIGIVLK 32 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~ 32 (230)
...||.|+.|.+.|...
T Consensus 5 gekp~~C~~CgK~F~~~ 21 (36)
T 1fv5_A 5 KPARFMCLPCGIAFSSP 21 (36)
T ss_dssp SCCCCEETTTTEECSCH
T ss_pred CccCeECCCCCCccCCH
Confidence 35799999999999754
No 138
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=56.66 E-value=4 Score=20.65 Aligned_cols=15 Identities=13% Similarity=0.301 Sum_probs=12.0
Q ss_pred CCccccccccceeee
Q 042810 18 NPLMCPVGNIGIVLK 32 (230)
Q Consensus 18 ~~~~~~~~~~~~~~~ 32 (230)
.||.|+.|...|...
T Consensus 1 k~~~C~~C~k~f~~~ 15 (30)
T 1paa_A 1 KAYACGLCNRAFTRR 15 (30)
T ss_dssp CCSBCTTTCCBCSSS
T ss_pred CCcCCcccCcccCCh
Confidence 389999999988643
No 139
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=55.88 E-value=3.7 Score=20.46 Aligned_cols=14 Identities=21% Similarity=0.335 Sum_probs=11.3
Q ss_pred Cccccccccceeee
Q 042810 19 PLMCPVGNIGIVLK 32 (230)
Q Consensus 19 ~~~~~~~~~~~~~~ 32 (230)
||.|++|...|...
T Consensus 2 ~~~C~~C~k~f~~~ 15 (29)
T 2m0f_A 2 PLKCRECGKQFTTS 15 (29)
T ss_dssp CEECTTTSCEESCH
T ss_pred CccCCCCCCccCCh
Confidence 78999999888643
No 140
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=55.55 E-value=4.4 Score=22.38 Aligned_cols=17 Identities=12% Similarity=0.120 Sum_probs=13.9
Q ss_pred CCCccccccccceeeee
Q 042810 17 NNPLMCPVGNIGIVLKQ 33 (230)
Q Consensus 17 ~~~~~~~~~~~~~~~~~ 33 (230)
..||.|++|...|...-
T Consensus 4 ~k~~~C~~C~k~f~~~~ 20 (39)
T 1njq_A 4 PRSYTCSFCKREFRSAQ 20 (39)
T ss_dssp SSSEECTTTCCEESSHH
T ss_pred CCceECCCCCcccCCHH
Confidence 57999999999987543
No 141
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=55.07 E-value=4.3 Score=20.33 Aligned_cols=15 Identities=7% Similarity=0.078 Sum_probs=11.9
Q ss_pred CCccccccccceeee
Q 042810 18 NPLMCPVGNIGIVLK 32 (230)
Q Consensus 18 ~~~~~~~~~~~~~~~ 32 (230)
.||.|++|...|...
T Consensus 1 k~~~C~~C~k~f~~~ 15 (30)
T 1klr_A 1 KTYQCQYCEFRSADS 15 (30)
T ss_dssp CCCCCSSSSCCCSCS
T ss_pred CCccCCCCCCccCCH
Confidence 478999999888653
No 142
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=54.41 E-value=4.3 Score=26.85 Aligned_cols=8 Identities=25% Similarity=0.679 Sum_probs=3.4
Q ss_pred CCccchhh
Q 042810 198 HHIFHASC 205 (230)
Q Consensus 198 ~H~FH~~C 205 (230)
+..||..|
T Consensus 20 ~~~~H~~C 27 (76)
T 1iml_A 20 GKDWHRPC 27 (76)
T ss_dssp TEEEETTT
T ss_pred CccccCCC
Confidence 34444444
No 143
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=54.33 E-value=2.8 Score=31.30 Aligned_cols=48 Identities=19% Similarity=0.471 Sum_probs=30.5
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCccccccc
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRR 221 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~ 221 (230)
....|..|...|... ..+-..-.||.+||..|........+.|-.|-.
T Consensus 18 ~~~~C~~C~~~Fs~~----------~RkHHCR~CG~ifC~~Cs~~~~~~vRVC~~C~~ 65 (120)
T 1y02_A 18 LEPSCKSCGAHFANT----------ARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQR 65 (120)
T ss_dssp --CCCTTTCCCCSSG----------GGCEECTTTCCEECGGGEEC----CCEEHHHHH
T ss_pred ccCcccCcCCccccc----------cccccCCCCCCeeCHHHhCCCCCCceECHHHHH
Confidence 346899999988651 223344459999999998877655667777743
No 144
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=53.90 E-value=7.4 Score=26.63 Aligned_cols=40 Identities=25% Similarity=0.462 Sum_probs=27.6
Q ss_pred cccCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhh
Q 042810 161 LVKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWL 210 (230)
Q Consensus 161 ~~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl 210 (230)
.+++...|.+|...|... ...-..-.||.+||..|....+
T Consensus 15 ~d~~~~~C~~C~~~Fs~~----------~RrHHCR~CG~v~C~~Cs~~~~ 54 (82)
T 2yw8_A 15 KDDEATHCRQCEKEFSIS----------RRKHHCRNCGHIFCNTCSSNEL 54 (82)
T ss_dssp CCCCCCBCTTTCCBCBTT----------BCCEECTTTCCEECSGGGCEEE
T ss_pred cCccCCcccCcCCcccCc----------cccccCCCCCCEEChHHhCCee
Confidence 344566899999998651 2223333599999999987653
No 145
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=53.69 E-value=6.1 Score=26.07 Aligned_cols=41 Identities=15% Similarity=0.469 Sum_probs=28.7
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCcccc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYE 226 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~ 226 (230)
...|+.|-+.+.. ++.+. .-+..||..|. +|..|+..+..+
T Consensus 9 ~~~C~~C~~~I~~-----------~~~v~--a~~~~~H~~CF--------~C~~C~~~L~~~ 49 (76)
T 2cu8_A 9 ASKCPKCDKTVYF-----------AEKVS--SLGKDWHKFCL--------KCERCSKTLTPG 49 (76)
T ss_dssp CCBCTTTCCBCCT-----------TTEEE--ETTEEEETTTC--------BCSSSCCBCCTT
T ss_pred CCCCcCCCCEeEC-----------CeEEE--ECCeEeeCCCC--------CCCCCCCccCCC
Confidence 5689999988765 44333 35777888885 588888877644
No 146
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=53.31 E-value=5.1 Score=26.82 Aligned_cols=21 Identities=14% Similarity=0.131 Sum_probs=16.4
Q ss_pred eccCCCCccccccccceeeee
Q 042810 13 GSCSNNPLMCPVGNIGIVLKQ 33 (230)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~ 33 (230)
||....||.|++|...|-...
T Consensus 1 gs~~~~~~~C~~C~~~f~~~~ 21 (95)
T 2yt9_A 1 GSSGSSGVACEICGKIFRDVY 21 (95)
T ss_dssp CCCCCSCEECSSSCCEESSSH
T ss_pred CCCCCCCeECCCCCCccCChH
Confidence 577889999999988875443
No 147
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=58.35 E-value=2.8 Score=21.22 Aligned_cols=17 Identities=12% Similarity=0.256 Sum_probs=12.9
Q ss_pred CCccccccccceeeeee
Q 042810 18 NPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 18 ~~~~~~~~~~~~~~~~~ 34 (230)
.||.|++|...|...-.
T Consensus 1 k~~~C~~C~k~f~~~~~ 17 (29)
T 2lvt_A 1 KPCQCVMCGKAFTQASS 17 (29)
Confidence 38999999998865433
No 148
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=52.89 E-value=8.1 Score=28.15 Aligned_cols=53 Identities=11% Similarity=0.028 Sum_probs=35.4
Q ss_pred CccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCccccCCC
Q 042810 166 DNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYEDLV 229 (230)
Q Consensus 166 ~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~~l~ 229 (230)
-.|..|...+.+ ........=+..||..|..+-+..+..|-.|...|...+++
T Consensus 33 F~C~~C~~~L~~-----------~~~~~~~~~g~~yC~~cy~~~f~~~~~C~~C~~~I~~~~~~ 85 (122)
T 1m3v_A 33 LKCSSCQAQLGD-----------IGTSSYTKSGMILCRNDYIRLFGNSGAGGSGGHMGSGGDVM 85 (122)
T ss_dssp HCCSSSCCCTTT-----------SEECCEEETTEEECHHHHHHHHCCCCSSSCSSCCSCCEESS
T ss_pred CCcCCCCCcccc-----------cCCeEEEECCeeecHHHHHHHcCCCCccccCCCCcCchheE
Confidence 367788777642 00111223456789999888777666899999999876664
No 149
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=52.83 E-value=5.8 Score=25.77 Aligned_cols=42 Identities=26% Similarity=0.577 Sum_probs=29.7
Q ss_pred CccccCchhhhhhhhhhccccccCceeEEeC-CCCccchhhHHHhhccCCccccc
Q 042810 166 DNCAVCLEELIAKEEIKGQTTEKKTQLITMP-CHHIFHASCISRWLEEQNSCPMC 219 (230)
Q Consensus 166 ~~C~ICle~~~~~~~~~~~~~~~~~~v~~Lp-C~H~FH~~CI~~Wl~~~~tCP~C 219 (230)
..|--|...+.+ .. ...-| |++.|+.+|=.--.++=+.||.|
T Consensus 16 ~~C~~C~~~~~~-----------~~-~y~C~~C~~~FC~dCD~fiHe~Lh~CPgC 58 (59)
T 1z60_A 16 RFCYGCQGELKD-----------QH-VYVCAVCQNVFCVDCDVFVHDSLHSCPGC 58 (59)
T ss_dssp CEETTTTEECTT-----------SE-EECCTTTTCCBCHHHHHTTTTTSCSSSTT
T ss_pred CcccccCcccCC-----------Cc-cEECCccCcCcccchhHHHHhhccCCcCC
Confidence 469999988843 11 23345 99999999954444556789988
No 150
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=52.54 E-value=5.7 Score=22.17 Aligned_cols=19 Identities=21% Similarity=0.347 Sum_probs=15.0
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|...|.....
T Consensus 7 ~~k~~~C~~C~k~f~~~~~ 25 (42)
T 2el5_A 7 GENPYECSECGKAFNRKDQ 25 (42)
T ss_dssp SCCSEECSSSCCEESSHHH
T ss_pred CCCCccCCCcChhhCCHHH
Confidence 4689999999999875433
No 151
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.46 E-value=5.9 Score=22.80 Aligned_cols=18 Identities=28% Similarity=0.265 Sum_probs=14.2
Q ss_pred CCCCccccc--cccceeeee
Q 042810 16 SNNPLMCPV--GNIGIVLKQ 33 (230)
Q Consensus 16 ~~~~~~~~~--~~~~~~~~~ 33 (230)
...||.|+. |.+.|...-
T Consensus 6 gekp~~C~~~~C~k~F~~~~ 25 (38)
T 2eln_A 6 SGILLKCPTDGCDYSTPDKY 25 (38)
T ss_dssp CCCCEECSSSSCCCEESCHH
T ss_pred CCCCCCCCCCCCCCccCCHH
Confidence 457999986 999997543
No 152
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=57.65 E-value=3 Score=21.15 Aligned_cols=18 Identities=11% Similarity=0.106 Sum_probs=13.6
Q ss_pred CCccccccccceeeeeec
Q 042810 18 NPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~ 35 (230)
.||.|+.|...|......
T Consensus 2 k~~~C~~C~k~f~~~~~l 19 (30)
T 2lvr_A 2 KPYVCIHCQRQFADPGAL 19 (30)
Confidence 589999999988765433
No 153
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.29 E-value=4.6 Score=21.81 Aligned_cols=17 Identities=24% Similarity=0.380 Sum_probs=13.8
Q ss_pred CCCCccccccccceeee
Q 042810 16 SNNPLMCPVGNIGIVLK 32 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~ 32 (230)
...||.|++|...|...
T Consensus 6 ~~k~~~C~~C~k~f~~~ 22 (37)
T 2elo_A 6 SGRSYSCPVCEKSFSED 22 (37)
T ss_dssp CCCCCEETTTTEECSSH
T ss_pred CCCCcCCCCCCCccCCH
Confidence 46899999999988653
No 154
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=51.98 E-value=7 Score=27.31 Aligned_cols=49 Identities=22% Similarity=0.508 Sum_probs=31.9
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhc------cCCccccccc
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLE------EQNSCPMCRR 221 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~------~~~tCP~CR~ 221 (230)
.+...|.+|...|... ..+-..-.||++||..|...+.. ..+.|-.|-.
T Consensus 18 ~~~~~C~~C~~~F~~~----------~RrhhCr~CG~v~C~~Cs~~~~~l~~~~~~~RVC~~C~~ 72 (90)
T 3t7l_A 18 SEAPNCMNCQVKFTFT----------KRRHHCRACGKVFCGVCCNRKCKLQYLEKEARVCVVCYE 72 (90)
T ss_dssp GGCCBCTTTCCBCCSS----------SCCEECTTTCCEECGGGSCEEEEETTTTEEEEECHHHHH
T ss_pred ccCCcCcCCCCcccch----------hhCccccCCCCEECCcccCCeeecCCCCCCCeECHHHHH
Confidence 3456799999988651 22233345999999999987642 1235666644
No 155
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.82 E-value=5 Score=21.91 Aligned_cols=18 Identities=17% Similarity=0.270 Sum_probs=14.6
Q ss_pred CCCCccccccccceeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQ 33 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~ 33 (230)
...||.|+.|...|....
T Consensus 6 ~~k~~~C~~C~k~f~~~~ 23 (37)
T 2elm_A 6 SGHLYYCSQCHYSSITKN 23 (37)
T ss_dssp SSCEEECSSSSCEEECHH
T ss_pred CCcCeECCCCCcccCCHH
Confidence 357999999999997643
No 156
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.72 E-value=6.1 Score=21.97 Aligned_cols=18 Identities=11% Similarity=0.200 Sum_probs=14.5
Q ss_pred CCCCccccccccceeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQ 33 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~ 33 (230)
...||.|++|...|...-
T Consensus 7 ~~k~~~C~~C~k~f~~~~ 24 (42)
T 2yte_A 7 GEKPYSCAECKETFSDNN 24 (42)
T ss_dssp SCCSCBCTTTCCBCSSHH
T ss_pred CCCCeECCCCCCccCCHH
Confidence 467999999999987543
No 157
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=51.70 E-value=9.3 Score=27.68 Aligned_cols=40 Identities=18% Similarity=0.336 Sum_probs=23.7
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHH
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISR 208 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~ 208 (230)
....|.+|+..=.. . ..+..++-+.--.|+..||..|+..
T Consensus 4 p~~~C~~C~~~~~~----~-~~g~~~~Ll~C~~C~~~~H~~Cl~~ 43 (112)
T 3v43_A 4 PIPICSFCLGTKEQ----N-REKKPEELISCADCGNSGHPSCLKF 43 (112)
T ss_dssp CCSSBTTTCCCTTC----C-TTSCCCCCEECTTTCCEECHHHHTC
T ss_pred cCccccccCCchhh----C-cCCCchhceEhhhcCCCCCCchhcC
Confidence 46789999875211 0 0111123343445999999999963
No 158
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=50.96 E-value=4.5 Score=27.48 Aligned_cols=47 Identities=26% Similarity=0.448 Sum_probs=29.2
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEe--CCCCccchhhHHHhh---------ccCCcccccccCc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITM--PCHHIFHASCISRWL---------EEQNSCPMCRRQI 223 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~L--pC~H~FH~~CI~~Wl---------~~~~tCP~CR~~i 223 (230)
...| ||...... +..+..= .|...||..|+.--- ..+-.||.|+..-
T Consensus 16 ~~~C-iC~~~~~~-----------g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~ 73 (78)
T 1wew_A 16 KVRC-VCGNSLET-----------DSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTS 73 (78)
T ss_dssp CCCC-SSCCCCCC-----------SCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCC
T ss_pred CEEe-ECCCcCCC-----------CCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCccc
Confidence 4556 78775322 4444444 599999999995321 1244799997643
No 159
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.93 E-value=6.4 Score=21.87 Aligned_cols=20 Identities=15% Similarity=0.219 Sum_probs=15.5
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|...|...-..
T Consensus 8 ~~k~~~C~~C~k~f~~~~~L 27 (42)
T 2ytb_A 8 GEKPYRCDQCGKAFSQKGSL 27 (42)
T ss_dssp SCCSBCCTTTTCCBSSHHHH
T ss_pred CCCCeeCCCccchhCCHHHH
Confidence 46799999999998764433
No 160
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=50.92 E-value=6.4 Score=26.19 Aligned_cols=34 Identities=21% Similarity=0.447 Sum_probs=26.9
Q ss_pred ccCCCccccCchhhhhhhhhhccccccCceeEEeCC-CCccchhhHHHhh
Q 042810 162 VKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPC-HHIFHASCISRWL 210 (230)
Q Consensus 162 ~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC-~H~FH~~CI~~Wl 210 (230)
.++..-|.||.++ .. ++.+.| +-.||..|.++..
T Consensus 5 ~ee~pWC~ICneD-At--------------lrC~gCdgDLYC~rC~rE~H 39 (67)
T 2d8v_A 5 SSGLPWCCICNED-AT--------------LRCAGCDGDLYCARCFREGH 39 (67)
T ss_dssp CCCCSSCTTTCSC-CC--------------EEETTTTSEEECSSHHHHHT
T ss_pred CcCCCeeEEeCCC-Ce--------------EEecCCCCceehHHHHHHHc
Confidence 3456789999996 22 788889 8899999998864
No 161
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=50.51 E-value=2.8 Score=28.03 Aligned_cols=46 Identities=17% Similarity=0.302 Sum_probs=28.4
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEe-CCCCccchhhHHHhh----ccCCcccccccC
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITM-PCHHIFHASCISRWL----EEQNSCPMCRRQ 222 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~L-pC~H~FH~~CI~~Wl----~~~~tCP~CR~~ 222 (230)
...| ||.....+ +...+.- .|...||..|+.--- ..+-.||.|+..
T Consensus 16 ~~~C-~C~~~~~~-----------g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~ 66 (72)
T 1wee_A 16 KVDC-KCGTKDDD-----------GERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIEL 66 (72)
T ss_dssp EECC-TTCCCSCC-----------SSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHH
T ss_pred ceEe-eCCCccCC-----------CCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCC
Confidence 3457 68765432 3333333 499999999986431 223469999764
No 162
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.05 E-value=6.5 Score=21.84 Aligned_cols=19 Identities=11% Similarity=0.057 Sum_probs=15.0
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|...|...-.
T Consensus 7 ~~k~~~C~~C~k~f~~~~~ 25 (41)
T 2ept_A 7 GQRVYECQECGKSFRQKGS 25 (41)
T ss_dssp CCCCEECSSSCCEESSHHH
T ss_pred CCCCeECCCCCCCcCCHHH
Confidence 4679999999999875443
No 163
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.53 E-value=6.7 Score=22.35 Aligned_cols=20 Identities=15% Similarity=0.378 Sum_probs=15.6
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|...|...-..
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2yts_A 9 GEKPYICNECGKSFIQKSHL 28 (46)
T ss_dssp SCCSEECSSSCCEESSHHHH
T ss_pred CCcCEECCCCChhhCChHHH
Confidence 46899999999998765433
No 164
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=49.38 E-value=10 Score=25.29 Aligned_cols=35 Identities=17% Similarity=0.356 Sum_probs=24.8
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHh
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRW 209 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~W 209 (230)
+..|.+|...|... ..+-..-.||++||..|....
T Consensus 11 ~~~C~~C~~~F~~~----------~RrHHCR~CG~v~C~~Cs~~~ 45 (73)
T 1vfy_A 11 SDACMICSKKFSLL----------NRKHHCRSCGGVFCQEHSSNS 45 (73)
T ss_dssp CSBCTTTCCBCBTT----------BCCEECTTTCCEECGGGSCEE
T ss_pred CCcccCCCCccCCc----------cccccCCCCCEEEcccccCCe
Confidence 46899999998651 222333349999999998654
No 165
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=49.32 E-value=7.8 Score=28.83 Aligned_cols=38 Identities=21% Similarity=0.408 Sum_probs=26.5
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhh
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWL 210 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl 210 (230)
.+...|.+|...|... ...-..-.||++||..|.....
T Consensus 67 ~~~~~C~~C~~~Fs~~----------~RrHHCR~CG~vfC~~Cs~~~~ 104 (125)
T 1joc_A 67 NEVQNCMACGKGFSVT----------VRRHHCRQCGNIFCAECSAKNA 104 (125)
T ss_dssp GGCCBCTTTCCBCCSS----------SCCEECTTTCCEECGGGSCEEE
T ss_pred CCCCCCcCcCCccccc----------cccccCCCCCeEEChHHhCCcc
Confidence 3456899999998651 2223333599999999987653
No 166
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.98 E-value=6.7 Score=22.05 Aligned_cols=19 Identities=16% Similarity=0.260 Sum_probs=14.9
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|...|...-.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (44)
T 2eof_A 9 GEKPYECNECQKAFNTKSN 27 (44)
T ss_dssp CCCSEECTTTCCEESCHHH
T ss_pred CCCCeECCCCCcccCCHhH
Confidence 4679999999999875433
No 167
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.49 E-value=7.1 Score=22.05 Aligned_cols=20 Identities=15% Similarity=0.293 Sum_probs=15.5
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|...|......
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L 28 (44)
T 2yu5_A 9 GENPFKCSKCDRVFTQRNYL 28 (44)
T ss_dssp CCCSEECSSSSCEESSSHHH
T ss_pred CCCCeECCCCCchhCCHHHH
Confidence 46799999999998765433
No 168
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.46 E-value=6.7 Score=22.16 Aligned_cols=20 Identities=10% Similarity=0.215 Sum_probs=15.4
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|...|......
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L 28 (44)
T 2emb_A 9 TRKRYECSKCQATFNLRKHL 28 (44)
T ss_dssp CCSSEECTTTCCEESCHHHH
T ss_pred CCCCeECCCCCCccCCHHHH
Confidence 46799999999999764433
No 169
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=48.19 E-value=3.5 Score=28.22 Aligned_cols=20 Identities=25% Similarity=0.670 Sum_probs=16.5
Q ss_pred CCCCccchhhHHHhhccCCccc
Q 042810 196 PCHHIFHASCISRWLEEQNSCP 217 (230)
Q Consensus 196 pC~H~FH~~CI~~Wl~~~~tCP 217 (230)
.|+|.||..|-..|.. .+|.
T Consensus 55 ~C~~~FC~~C~~~wH~--~~C~ 74 (80)
T 2jmo_A 55 GCGFAFCRECKEAYHE--GECS 74 (80)
T ss_dssp CCSCCEETTTTEECCS--SCSS
T ss_pred CCCCeeccccCccccC--Cccc
Confidence 5999999999999965 5553
No 170
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.08 E-value=5.9 Score=22.37 Aligned_cols=20 Identities=20% Similarity=0.204 Sum_probs=15.3
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|...|......
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L 28 (44)
T 2eoj_A 9 GENPYECCECGKVFSRKDQL 28 (44)
T ss_dssp SCCSCEETTTTEECSSHHHH
T ss_pred CCcCeeCCCCCCccCCHHHH
Confidence 46799999999988764433
No 171
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.99 E-value=7.2 Score=22.20 Aligned_cols=20 Identities=15% Similarity=0.277 Sum_probs=15.5
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|...|...-..
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2ytf_A 9 GEKPFECSECQKAFNTKSNL 28 (46)
T ss_dssp CCCSEECSSSCCEESSHHHH
T ss_pred CCCCcCCCCCCcccCCHHHH
Confidence 46899999999998764433
No 172
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.90 E-value=7.1 Score=22.24 Aligned_cols=19 Identities=11% Similarity=0.253 Sum_probs=15.0
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|...|...-.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2eow_A 9 GEKPYKCNECGKAFRARSS 27 (46)
T ss_dssp CCCCEECTTSCCEESSHHH
T ss_pred CCCCeeccccCChhcCHHH
Confidence 4689999999999876443
No 173
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.82 E-value=7.6 Score=22.22 Aligned_cols=19 Identities=11% Similarity=0.118 Sum_probs=15.1
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|...|.....
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2em6_A 9 GEKCYKCDVCGKEFSQSSH 27 (46)
T ss_dssp CCCCCBCSSSCCBCSSHHH
T ss_pred CCCCeECCCCCcccCCHHH
Confidence 4689999999999875443
No 174
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.77 E-value=7.8 Score=22.23 Aligned_cols=20 Identities=15% Similarity=0.335 Sum_probs=15.5
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|.+.|...-..
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2eon_A 9 GEKPYKCQVCGKAFRVSSHL 28 (46)
T ss_dssp SCCSCBCSSSCCBCSSHHHH
T ss_pred CCcccCCCCCCcccCcHHHH
Confidence 46899999999998764433
No 175
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.77 E-value=7.6 Score=22.17 Aligned_cols=20 Identities=20% Similarity=0.356 Sum_probs=15.5
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|...|......
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2emg_A 9 GENPFICSECGKVFTHKTNL 28 (46)
T ss_dssp SCCSCBCTTTCCBCSSHHHH
T ss_pred CCCCEECCccCcccCCHHHH
Confidence 46899999999998765433
No 176
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.72 E-value=7.7 Score=22.13 Aligned_cols=20 Identities=10% Similarity=0.160 Sum_probs=15.5
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|...|...-..
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L 28 (46)
T 2enf_A 9 GEKPYKCNECGKVFTQNSHL 28 (46)
T ss_dssp CCCSCBCSSSCCBCSSHHHH
T ss_pred CCcCeECCCCCcccCCHHHH
Confidence 46899999999998764433
No 177
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.56 E-value=7.5 Score=22.18 Aligned_cols=19 Identities=21% Similarity=0.392 Sum_probs=14.9
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|...|.....
T Consensus 9 ~~~~~~C~~C~k~F~~~~~ 27 (46)
T 2em3_A 9 GEKPYECKVCSKAFTQKAH 27 (46)
T ss_dssp SCCSEECSSSCCEESSHHH
T ss_pred CCcCeECCCCCcccCCHHH
Confidence 4689999999999875433
No 178
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=47.52 E-value=5.4 Score=26.82 Aligned_cols=48 Identities=23% Similarity=0.436 Sum_probs=28.4
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhc-----cCCcccccccC
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLE-----EQNSCPMCRRQ 222 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~-----~~~tCP~CR~~ 222 (230)
+..-.||...+.. .+..+..-.|.-.||..|+.---. ..-.||.|+..
T Consensus 9 ~~~yCiC~~~~~~----------~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~ 61 (75)
T 3kqi_A 9 VPVYCVCRLPYDV----------TRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKT 61 (75)
T ss_dssp CCEETTTTEECCT----------TSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHH
T ss_pred CeeEEECCCcCCC----------CCCEEEcCCCCCCEecccccccccccCCCCEEECCCCccc
Confidence 4445588765432 022333334999999999953211 23469999764
No 179
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=47.38 E-value=7 Score=20.04 Aligned_cols=15 Identities=20% Similarity=0.421 Sum_probs=11.9
Q ss_pred CCcccc--ccccceeee
Q 042810 18 NPLMCP--VGNIGIVLK 32 (230)
Q Consensus 18 ~~~~~~--~~~~~~~~~ 32 (230)
.||.|+ .|...|...
T Consensus 1 kp~~C~~~~C~k~f~~~ 17 (31)
T 1sp2_A 1 RPFMCTWSYCGKRFTRS 17 (31)
T ss_dssp CCCBCCSTTCCCBCSSH
T ss_pred CCcCCcCCCCCcccCCH
Confidence 489998 999988654
No 180
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.36 E-value=7.5 Score=22.04 Aligned_cols=19 Identities=16% Similarity=0.314 Sum_probs=14.9
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|...|.....
T Consensus 9 ~~k~~~C~~C~k~F~~~~~ 27 (44)
T 2epv_A 9 GEKPYECNECGKAFIWKSL 27 (44)
T ss_dssp CCCSEECSSSCCEESSHHH
T ss_pred CCcCeECCCCCcccCchHH
Confidence 4579999999999875433
No 181
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.33 E-value=9.9 Score=26.07 Aligned_cols=39 Identities=21% Similarity=0.285 Sum_probs=26.9
Q ss_pred cccCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHh
Q 042810 161 LVKAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRW 209 (230)
Q Consensus 161 ~~~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~W 209 (230)
.+++...|.+|...|... ..+-..-.||.+||..|....
T Consensus 10 pd~~~~~C~~C~~~F~~~----------~RrHHCR~CG~vfC~~Cs~~~ 48 (84)
T 1x4u_A 10 PTNNFGNCTGCSATFSVL----------KKRRSCSNCGNSFCSRCCSFK 48 (84)
T ss_dssp SCCCCSSCSSSCCCCCSS----------SCCEECSSSCCEECTTTSCEE
T ss_pred cCCCCCcCcCcCCccccc----------hhhhhhcCCCcEEChhhcCCc
Confidence 344566899999998651 222333459999999998654
No 182
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.25 E-value=7.3 Score=22.29 Aligned_cols=21 Identities=14% Similarity=0.246 Sum_probs=15.9
Q ss_pred CCCCccccccccceeeeeecc
Q 042810 16 SNNPLMCPVGNIGIVLKQRCQ 36 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~ 36 (230)
...||.|++|.+.|...-..+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2enh_A 9 GEKPYECDVCRKAFSHHASLT 29 (46)
T ss_dssp CSSSCBCTTTCCBCSSSHHHH
T ss_pred CCCCcCCCCcCchhCCHHHHH
Confidence 467999999999987654433
No 183
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=47.15 E-value=11 Score=28.42 Aligned_cols=50 Identities=16% Similarity=0.363 Sum_probs=31.7
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccC----Cccccccc
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQ----NSCPMCRR 221 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~----~tCP~CR~ 221 (230)
..+..|.+|...|... .+.......|.|.+|..|-..--..+ =.|-+|+.
T Consensus 53 ~~~~~C~~C~~~~g~l---------~~~g~~C~~C~~~VC~~C~~~~~~~~~~~~W~C~vC~k 106 (134)
T 1zbd_B 53 DGVNRCILCGEQLGML---------GSASVVCEDCKKNVCTKCGVETSNNRPHPVWLCKICLE 106 (134)
T ss_dssp CSSSBCSSSCCBCSTT---------SCCEEECTTTCCEEETTSEEECCCSSSSCCEEEHHHHH
T ss_pred CCCccccccCCCcccc---------cCCCCCCCCCCcccccccCCccCCCCCccceechhhHH
Confidence 4578999999998331 03345555699999999975321111 14777764
No 184
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=47.12 E-value=7.5 Score=21.55 Aligned_cols=18 Identities=11% Similarity=0.342 Sum_probs=14.4
Q ss_pred CCCCccccccccceeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQ 33 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~ 33 (230)
...||.|++|...|....
T Consensus 8 ~~~~~~C~~C~k~f~~~~ 25 (42)
T 2epc_A 8 GETPYLCGQCGKSFTQRG 25 (42)
T ss_dssp SSCCEECSSSCCEESSHH
T ss_pred CCCCeECCCCCcccCCHH
Confidence 467999999999986543
No 185
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=47.00 E-value=7 Score=27.38 Aligned_cols=24 Identities=21% Similarity=0.346 Sum_probs=18.4
Q ss_pred eccCCCCccccccccceeeeeecc
Q 042810 13 GSCSNNPLMCPVGNIGIVLKQRCQ 36 (230)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~ 36 (230)
||....||.|++|...|......+
T Consensus 1 gs~~~~~~~C~~C~~~f~~~~~l~ 24 (124)
T 2dlq_A 1 GSSGSSGVECPTCHKKFLSKYYLK 24 (124)
T ss_dssp CCCCCSSCCCTTTCCCCSSHHHHH
T ss_pred CCCCCCCCCCCCCCCcCCCHHHHH
Confidence 577889999999998886554433
No 186
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.86 E-value=7.6 Score=22.09 Aligned_cols=20 Identities=15% Similarity=0.237 Sum_probs=15.6
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|...|......
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L 28 (46)
T 2yrj_A 9 GEKPYRCGECGKAFAQKANL 28 (46)
T ss_dssp CCCCEECSSSCCEESSHHHH
T ss_pred CCCCeECCCCCCccCCHHHH
Confidence 46899999999998765443
No 187
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.70 E-value=6.6 Score=22.21 Aligned_cols=20 Identities=5% Similarity=-0.012 Sum_probs=15.4
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|...|......
T Consensus 9 ~~~~~~C~~C~k~F~~~~~L 28 (44)
T 2eox_A 9 DSKSYNCNECGKAFTRIFHL 28 (44)
T ss_dssp CCCCEEETTTTEEESSSHHH
T ss_pred CCCCeECcccCcccCCHHHH
Confidence 46899999999988765433
No 188
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.68 E-value=7.8 Score=22.10 Aligned_cols=19 Identities=11% Similarity=0.314 Sum_probs=15.1
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|...|.....
T Consensus 9 ~~k~~~C~~C~k~F~~~~~ 27 (46)
T 2en3_A 9 GEKPFQCKECGMNFSWSCS 27 (46)
T ss_dssp CCCSEECSSSCCEESSSHH
T ss_pred CCCCeeCcccChhhCCHHH
Confidence 4689999999999975443
No 189
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=46.50 E-value=7.7 Score=24.48 Aligned_cols=22 Identities=18% Similarity=0.199 Sum_probs=15.5
Q ss_pred ccCCCCccccccccceeeeeec
Q 042810 14 SCSNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~ 35 (230)
.....||.|++|...|-.....
T Consensus 4 ~~~~~~~~C~~C~k~f~~~~~L 25 (70)
T 1x5w_A 4 GSSGHPEKCSECSYSCSSKAAL 25 (70)
T ss_dssp CCCCCSEECSSSSCEESSHHHH
T ss_pred CCCCCCeECCCCCcccCCHHHH
Confidence 3456789999998888654433
No 190
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.29 E-value=8 Score=22.11 Aligned_cols=19 Identities=16% Similarity=0.270 Sum_probs=15.0
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|...|.....
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2yto_A 9 GEKPYKCSDCGKAFTRKSG 27 (46)
T ss_dssp SCCCEECSSSCCEESSHHH
T ss_pred CCCCEECcccCCccCCHhH
Confidence 4689999999999875443
No 191
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.28 E-value=7.8 Score=21.55 Aligned_cols=18 Identities=17% Similarity=0.313 Sum_probs=14.6
Q ss_pred CCCCccccccccceeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQ 33 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~ 33 (230)
...||.|++|...|...-
T Consensus 8 ~~k~~~C~~C~k~f~~~~ 25 (42)
T 2en2_A 8 GEKPYKCETCGARFVQVA 25 (42)
T ss_dssp SSCSEECTTTCCEESSHH
T ss_pred CCCCEeCCCcChhhCCHH
Confidence 467999999999987543
No 192
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.21 E-value=8.4 Score=21.46 Aligned_cols=19 Identities=16% Similarity=0.277 Sum_probs=15.0
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|...|...-.
T Consensus 8 ~~k~~~C~~C~k~f~~~~~ 26 (42)
T 2eos_A 8 GEKPYPCEICGTRFRHLQT 26 (42)
T ss_dssp SSCCBCCSSSCCCBSSHHH
T ss_pred CCCCEECCCCCCccCCHHH
Confidence 4679999999999875443
No 193
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=46.13 E-value=16 Score=28.54 Aligned_cols=34 Identities=15% Similarity=0.504 Sum_probs=24.5
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEe---CCCCccchhhHHHhhcc
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITM---PCHHIFHASCISRWLEE 212 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~L---pC~H~FH~~CI~~Wl~~ 212 (230)
.+.-|.||-+ +..+..- .|...||..||+.++..
T Consensus 78 ~~~yC~wC~~---------------Gg~l~~Cdn~~C~r~FC~~CI~~nvG~ 114 (159)
T 3a1b_A 78 YQSYCTICCG---------------GREVLMCGNNNCCRCFCVECVDLLVGP 114 (159)
T ss_dssp SBSSCTTTSC---------------CSEEEECSSTTTCCEEEHHHHHHHTCT
T ss_pred CcceeeEecC---------------CCeEEeeCCCCCCCchhHHHHHHhcCH
Confidence 4667888876 3334443 38899999999999854
No 194
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.09 E-value=8.1 Score=22.04 Aligned_cols=19 Identities=16% Similarity=0.408 Sum_probs=14.8
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|...|...-.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2ep2_A 9 GEKPYECSICGKSFTKKSQ 27 (46)
T ss_dssp CCCSEECSSSCCEESSHHH
T ss_pred CCcCcCCCCCCcccCCHHH
Confidence 4689999999999875433
No 195
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.01 E-value=8.1 Score=22.02 Aligned_cols=20 Identities=10% Similarity=0.160 Sum_probs=15.4
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|...|...-..
T Consensus 9 ~~~~~~C~~C~k~F~~~~~L 28 (46)
T 2emi_A 9 GERHYECSECGKAFIQKSTL 28 (46)
T ss_dssp SCCCEECSSSCCEESSHHHH
T ss_pred CCCCCCCCCCCcccCCHHHH
Confidence 46899999999998754433
No 196
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.97 E-value=8.1 Score=21.98 Aligned_cols=20 Identities=15% Similarity=0.315 Sum_probs=15.5
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|...|...-..
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2ep1_A 9 GEKPYECSDCGKSFIKKSQL 28 (46)
T ss_dssp SCCSSCCSSSCCCCSSHHHH
T ss_pred CCCCcCCCCCCchhCCHHHH
Confidence 46899999999998754433
No 197
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=45.74 E-value=6.3 Score=26.40 Aligned_cols=26 Identities=31% Similarity=0.829 Sum_probs=18.1
Q ss_pred CC-CccchhhHHHhhcc----CCcccccccCcc
Q 042810 197 CH-HIFHASCISRWLEE----QNSCPMCRRQIQ 224 (230)
Q Consensus 197 C~-H~FH~~CI~~Wl~~----~~tCP~CR~~i~ 224 (230)
|. ..||..|+. |.. +-.||.|+..-.
T Consensus 37 C~~~wfH~~Cvg--l~~~p~g~w~Cp~C~~~~~ 67 (71)
T 1wen_A 37 CSIEWFHFACVG--LTTKPRGKWFCPRCSQESG 67 (71)
T ss_dssp CSCCCEETTTTT--CSSCCSSCCCCTTTSSCSS
T ss_pred CCCccEecccCC--cCcCCCCCEECCCCCcccc
Confidence 55 689999996 332 226999987543
No 198
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.61 E-value=8.7 Score=21.88 Aligned_cols=21 Identities=10% Similarity=0.178 Sum_probs=15.8
Q ss_pred CCCCccccccccceeeeeecc
Q 042810 16 SNNPLMCPVGNIGIVLKQRCQ 36 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~ 36 (230)
...||.|++|.+.|...-..+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~ 29 (47)
T 2epx_A 9 GKKPYECIECGKAFIQNTSLI 29 (47)
T ss_dssp CCCSBCCSSSCCCBSSHHHHH
T ss_pred CCCCEECCccCchhCChHHHH
Confidence 467999999999987554433
No 199
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.58 E-value=7.6 Score=22.15 Aligned_cols=19 Identities=11% Similarity=0.225 Sum_probs=15.0
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|...|...-.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2eq1_A 9 GEKPYKCNECGKAFRAHSN 27 (46)
T ss_dssp CSCCCCCTTTTCCCSSHHH
T ss_pred CCCCeECCcCChhhCCHHH
Confidence 4689999999999865443
No 200
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.53 E-value=8.2 Score=22.05 Aligned_cols=20 Identities=10% Similarity=0.101 Sum_probs=15.5
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|.+.|...-..
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L 28 (46)
T 2ytp_A 9 GERHYECSECGKAFARKSTL 28 (46)
T ss_dssp CCCCEECSSSCCEESSHHHH
T ss_pred CCCCeECCcCCcccCCHHHH
Confidence 46899999999998765443
No 201
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.48 E-value=8 Score=22.11 Aligned_cols=19 Identities=11% Similarity=0.207 Sum_probs=14.9
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|...|...-.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2eoh_A 9 GKKPYECKECRKTFIQIGH 27 (46)
T ss_dssp CSCSCCCSSSCCCCSSHHH
T ss_pred CCCCcCCCCcCchhCCHHH
Confidence 4679999999999875433
No 202
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.45 E-value=7.9 Score=21.90 Aligned_cols=18 Identities=6% Similarity=-0.053 Sum_probs=14.5
Q ss_pred CCCCccccccccceeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQ 33 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~ 33 (230)
...||.|++|.+.|....
T Consensus 9 ~~~~~~C~~C~k~f~~~~ 26 (44)
T 2eou_A 9 AKTTSECQECGKIFRHSS 26 (44)
T ss_dssp SSCCCCCTTTCCCCSSHH
T ss_pred CCcCeECCCCCcccCCHH
Confidence 468999999999987543
No 203
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.33 E-value=8.4 Score=21.95 Aligned_cols=21 Identities=14% Similarity=0.376 Sum_probs=16.0
Q ss_pred CCCCccccccccceeeeeecc
Q 042810 16 SNNPLMCPVGNIGIVLKQRCQ 36 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~ 36 (230)
...||.|++|.+.|......+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2em7_A 9 GEKPYKCEECGKGFICRRDLY 29 (46)
T ss_dssp CCCSEECSSSCCEESCHHHHH
T ss_pred CCcCccCCCccchhCCHHHHH
Confidence 467999999999987654433
No 204
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=45.31 E-value=8.2 Score=22.00 Aligned_cols=20 Identities=5% Similarity=0.102 Sum_probs=15.5
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|...|......
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L 28 (46)
T 2em0_A 9 GEKTWKCRECDMCFSQASSL 28 (46)
T ss_dssp CCCCCCCSSSCCCCSSHHHH
T ss_pred CCcCeECCCCCcccCCHHHH
Confidence 46899999999998765443
No 205
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.30 E-value=8 Score=22.11 Aligned_cols=18 Identities=17% Similarity=0.228 Sum_probs=14.4
Q ss_pred CCCCccccccccceeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQ 33 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~ 33 (230)
...||.|++|.+.|-..-
T Consensus 9 ~~k~~~C~~C~k~f~~~~ 26 (46)
T 2em4_A 9 GQRPYECIECGKAFKTKS 26 (46)
T ss_dssp CSSSEECSSSCCEESSHH
T ss_pred CCcCcCCCCCCCccCCHH
Confidence 467999999999987543
No 206
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=45.25 E-value=8.5 Score=21.99 Aligned_cols=19 Identities=11% Similarity=0.368 Sum_probs=14.9
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|...|...-.
T Consensus 9 ~~k~~~C~~C~k~F~~~~~ 27 (46)
T 2emj_A 9 GEKPFECAECGKSFSISSQ 27 (46)
T ss_dssp CCCSEECSSSSCEESSHHH
T ss_pred CCCCEECCCCCcccCCHHH
Confidence 4689999999999875433
No 207
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.04 E-value=6.8 Score=22.31 Aligned_cols=20 Identities=10% Similarity=0.278 Sum_probs=15.4
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|.+.|...-..
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2eq3_A 9 GEKPYECNQCGKAFSVRSSL 28 (46)
T ss_dssp CCCSSEETTTTEECSSHHHH
T ss_pred CCCCeECCCCChhhCCHHHH
Confidence 46899999999998764433
No 208
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.93 E-value=8.6 Score=21.84 Aligned_cols=19 Identities=16% Similarity=0.349 Sum_probs=14.8
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|...|.....
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2eme_A 9 GEKPYVCDYCGKAFGLSAE 27 (46)
T ss_dssp CCCSEECSSSCCEESSHHH
T ss_pred CCCCeECCCCChhhCCHHH
Confidence 4679999999999865433
No 209
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.69 E-value=8.7 Score=21.87 Aligned_cols=20 Identities=10% Similarity=0.225 Sum_probs=15.4
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|...|...-..
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2ep3_A 9 GEKPYRCAECGKAFTDRSNL 28 (46)
T ss_dssp CCCSEECSSSCCEESSHHHH
T ss_pred CCCCeECCCCCchhCCHHHH
Confidence 46899999999998764433
No 210
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.62 E-value=8.5 Score=22.00 Aligned_cols=21 Identities=5% Similarity=0.013 Sum_probs=15.9
Q ss_pred CCCCccccccccceeeeeecc
Q 042810 16 SNNPLMCPVGNIGIVLKQRCQ 36 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~ 36 (230)
...||.|++|...|......+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eoy_A 9 KEKCFKCNKCEKTFSCSKYLT 29 (46)
T ss_dssp CSCCEECSSSCCEESSSHHHH
T ss_pred CCCCEECcCCCCcCCCHHHHH
Confidence 467999999999997654433
No 211
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.59 E-value=8.8 Score=21.80 Aligned_cols=20 Identities=15% Similarity=0.285 Sum_probs=15.5
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|.+.|......
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L 28 (46)
T 2epw_A 9 GEKPCKCTECGKAFCWKSQL 28 (46)
T ss_dssp CCCSEECSSSCCEESSSHHH
T ss_pred CCCCeeCCCCCCccCCHHHH
Confidence 46799999999998765443
No 212
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.54 E-value=8.8 Score=21.91 Aligned_cols=20 Identities=10% Similarity=0.245 Sum_probs=15.5
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|...|...-..
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2yth_A 9 GEKPFQCEECGKRFTQNSHL 28 (46)
T ss_dssp CSSSBCCSSSCCCBSSHHHH
T ss_pred CCcCCCCCCCCcccCCHHHH
Confidence 46799999999998765443
No 213
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.47 E-value=8.5 Score=21.93 Aligned_cols=21 Identities=10% Similarity=0.214 Sum_probs=15.9
Q ss_pred CCCCccccccccceeeeeecc
Q 042810 16 SNNPLMCPVGNIGIVLKQRCQ 36 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~ 36 (230)
...||.|++|...|...-..+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eq2_A 9 GGKPYQCNECGKAFSQTSKLA 29 (46)
T ss_dssp SSCSSSCCSSCCCCSSHHHHH
T ss_pred CCCCeECCCCCcccCCHHHHH
Confidence 468999999999987654433
No 214
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.45 E-value=8.6 Score=21.84 Aligned_cols=18 Identities=11% Similarity=0.303 Sum_probs=14.4
Q ss_pred CCCCccccccccceeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQ 33 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~ 33 (230)
...||.|++|.+.|....
T Consensus 9 ~~~~~~C~~C~k~f~~~~ 26 (46)
T 2eor_A 9 GEKPYNCEECGKAFIHDS 26 (46)
T ss_dssp CCCSEECTTTCCEESSHH
T ss_pred CCcCccCCCCCCCcCCHH
Confidence 468999999999986543
No 215
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=44.40 E-value=9.2 Score=21.83 Aligned_cols=20 Identities=10% Similarity=0.187 Sum_probs=15.4
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|.+.|...-..
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L 28 (46)
T 2emk_A 9 GEKPYECKECGKAFSQTTHL 28 (46)
T ss_dssp SSCSCBCSSSCCBCSCHHHH
T ss_pred CCCceECCCCCchhCCHHHH
Confidence 46899999999998764433
No 216
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=44.38 E-value=4.8 Score=29.07 Aligned_cols=27 Identities=22% Similarity=0.591 Sum_probs=19.4
Q ss_pred CCCCccchhhHHHhhcc----CCcccccccC
Q 042810 196 PCHHIFHASCISRWLEE----QNSCPMCRRQ 222 (230)
Q Consensus 196 pC~H~FH~~CI~~Wl~~----~~tCP~CR~~ 222 (230)
.|...||..|+.+=+.. .-.||.|+.-
T Consensus 74 ~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~c 104 (111)
T 2ysm_A 74 TCDKGYHTFCLQPVMKSVPTNGWKCKNCRIC 104 (111)
T ss_dssp SSCCEEEGGGSSSCCSSCCSSCCCCHHHHCC
T ss_pred CCCcHHhHHhcCCccccCCCCCcCCcCCcCc
Confidence 39999999999864433 2258888653
No 217
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.33 E-value=8.9 Score=21.83 Aligned_cols=21 Identities=14% Similarity=0.262 Sum_probs=16.0
Q ss_pred CCCCccccccccceeeeeecc
Q 042810 16 SNNPLMCPVGNIGIVLKQRCQ 36 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~ 36 (230)
...||.|++|.+.|......+
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ep0_A 9 GEKPYKCDVCHKSFRYGSSLT 29 (46)
T ss_dssp TCCSEECSSSCCEESSHHHHH
T ss_pred CCCCeeCcccCcccCChHHHH
Confidence 468999999999987654433
No 218
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.30 E-value=8.6 Score=21.90 Aligned_cols=20 Identities=10% Similarity=0.160 Sum_probs=15.5
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|.+.|...-..
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L 28 (46)
T 2yti_A 9 GEKPYKCNECGKVFTQNSHL 28 (46)
T ss_dssp CCCTTCCSSSCCCCSSHHHH
T ss_pred CCcCeECCCCCcccCChhHH
Confidence 46899999999998764433
No 219
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=44.29 E-value=8.6 Score=21.90 Aligned_cols=19 Identities=5% Similarity=0.034 Sum_probs=14.9
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|.+.|...-.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2ema_A 9 GEKRYKCNECGKVFSRNSQ 27 (46)
T ss_dssp TSCCEECSSSCCEESSHHH
T ss_pred CCcCcCCCCCcchhCCHHH
Confidence 4689999999998875443
No 220
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.25 E-value=8.9 Score=21.89 Aligned_cols=18 Identities=6% Similarity=0.082 Sum_probs=14.5
Q ss_pred CCCCccccccccceeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQ 33 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~ 33 (230)
...||.|++|.+.|...-
T Consensus 9 ~~k~~~C~~C~k~F~~~~ 26 (46)
T 2en9_A 9 GKKLFKCNECKKTFTQSS 26 (46)
T ss_dssp SSCCCBCTTTCCBCSSHH
T ss_pred CCCCEECCccCcccCCHH
Confidence 468999999999886543
No 221
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.24 E-value=8.3 Score=21.62 Aligned_cols=19 Identities=16% Similarity=0.216 Sum_probs=15.0
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|...|...-.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (44)
T 2en7_A 9 GMKPYVCNECGKAFRSKSY 27 (44)
T ss_dssp SSSSSCCTTTCCCCSSHHH
T ss_pred CCcCeECCCCCCccCCHHH
Confidence 4679999999999876443
No 222
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=44.24 E-value=9 Score=21.76 Aligned_cols=20 Identities=20% Similarity=0.258 Sum_probs=15.4
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|.+.|...-..
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2el4_A 9 GVKPYGCSQCAKTFSLKSQL 28 (46)
T ss_dssp CCCSEECSSSSCEESSHHHH
T ss_pred CCCceECCCCCchhCCHHHH
Confidence 46899999999998764433
No 223
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.16 E-value=9.4 Score=21.53 Aligned_cols=18 Identities=11% Similarity=0.252 Sum_probs=14.6
Q ss_pred CCCCccccccccceeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQ 33 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~ 33 (230)
...||.|++|...|....
T Consensus 7 ~~k~~~C~~C~k~f~~~~ 24 (43)
T 2yrm_A 7 GNGAFFCNECDCRFSEEA 24 (43)
T ss_dssp SSCCBCCSSSCCCBSSHH
T ss_pred CCCCEECCCCCCeeCChH
Confidence 468999999999987543
No 224
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.10 E-value=8.9 Score=21.90 Aligned_cols=18 Identities=17% Similarity=0.368 Sum_probs=14.5
Q ss_pred CCCCccccccccceeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQ 33 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~ 33 (230)
...||.|++|...|...-
T Consensus 9 ~~k~~~C~~C~k~f~~~~ 26 (46)
T 2emz_A 9 GERPFKCNECGKGFGRRS 26 (46)
T ss_dssp CCCSCCCSSSCCCCSSHH
T ss_pred CCCCeECCCCCcccCCHH
Confidence 467999999999887543
No 225
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=43.96 E-value=7.4 Score=22.62 Aligned_cols=22 Identities=5% Similarity=-0.023 Sum_probs=16.2
Q ss_pred ccCCCCccccccccceeeeeec
Q 042810 14 SCSNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~ 35 (230)
.....||.|++|...|......
T Consensus 7 ~~~~k~~~C~~C~k~f~~~~~L 28 (48)
T 2epr_A 7 GRTRKQVACEICGKIFRDVYHL 28 (48)
T ss_dssp CCCCCSEEETTTTEEESSHHHH
T ss_pred CCCCcCeeCCCCCcccCCHHHH
Confidence 3456799999999988654433
No 226
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.86 E-value=9.2 Score=21.84 Aligned_cols=19 Identities=11% Similarity=0.230 Sum_probs=15.0
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|...|.....
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2em2_A 9 GEKPFKCKECGKAFRQNIH 27 (46)
T ss_dssp CCCSEECSSSCCEESSHHH
T ss_pred CCCCEECCcCCchhCCHHH
Confidence 4689999999999875433
No 227
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.76 E-value=9.8 Score=21.59 Aligned_cols=19 Identities=21% Similarity=0.394 Sum_probs=14.9
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|...|.....
T Consensus 9 ~~~~~~C~~C~k~f~~~~~ 27 (46)
T 2eov_A 9 GEKPYKCSDCGKSFTWKSR 27 (46)
T ss_dssp SCCSCBCSSSCCBCSSHHH
T ss_pred CCCCccCCccChhhCCHHH
Confidence 4679999999999875433
No 228
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.74 E-value=8.8 Score=21.87 Aligned_cols=19 Identities=11% Similarity=0.113 Sum_probs=14.9
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|...|...-.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2ene_A 9 GEKPYKCNECGKVFRHNSY 27 (46)
T ss_dssp CSSSEECSSSCCEESSHHH
T ss_pred CCCCeECCCCCchhCChHH
Confidence 4679999999999875443
No 229
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.72 E-value=9.1 Score=21.79 Aligned_cols=18 Identities=11% Similarity=0.194 Sum_probs=14.5
Q ss_pred CCCCccccccccceeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQ 33 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~ 33 (230)
...||.|++|...|...-
T Consensus 9 ~~~~~~C~~C~k~f~~~~ 26 (46)
T 2ytk_A 9 GEKPYKCNECGKVFTQNS 26 (46)
T ss_dssp SSCSEECSSSCCEESSHH
T ss_pred CCCCEeCCcCCCccCCHH
Confidence 468999999999886543
No 230
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=43.72 E-value=7.2 Score=27.55 Aligned_cols=26 Identities=31% Similarity=0.829 Sum_probs=18.0
Q ss_pred CC-CccchhhHHHhhcc----CCcccccccCcc
Q 042810 197 CH-HIFHASCISRWLEE----QNSCPMCRRQIQ 224 (230)
Q Consensus 197 C~-H~FH~~CI~~Wl~~----~~tCP~CR~~i~ 224 (230)
|. ..||..|+. +.. +-.||.|+..-.
T Consensus 57 C~~~WfH~~CVg--l~~~p~g~W~Cp~C~~~~~ 87 (91)
T 1weu_A 57 CSIEWFHFACVG--LTTKPRGKWFCPRCSQESG 87 (91)
T ss_dssp CSCCCCCSTTTT--CSSCCCSSCCCTTTCCCCS
T ss_pred CCCCCEecccCC--cCcCCCCCEECcCccCcCC
Confidence 55 689999996 322 236999987543
No 231
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=43.70 E-value=9.8 Score=21.71 Aligned_cols=19 Identities=16% Similarity=0.371 Sum_probs=14.8
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|.+.|...-.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2ely_A 9 GEKPFKCVECGKGFSRRSA 27 (46)
T ss_dssp CCCSBCCSSSCCCBSSTTH
T ss_pred CCCCcccCccCcccCCHHH
Confidence 4679999999998875433
No 232
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=43.69 E-value=7.9 Score=22.02 Aligned_cols=21 Identities=33% Similarity=0.623 Sum_probs=15.8
Q ss_pred ccCCCCccccccccceeeeee
Q 042810 14 SCSNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~ 34 (230)
.....||.|++|.+.|...-.
T Consensus 5 h~~~k~~~C~~C~k~f~~~~~ 25 (45)
T 2epq_A 5 SSGEKPYSCPVCGLRFKRKDR 25 (45)
T ss_dssp CSSCCSSEETTTTEECSCHHH
T ss_pred cCCCCCCcCCCCCcccCCHHH
Confidence 345689999999999875443
No 233
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.66 E-value=9.3 Score=21.75 Aligned_cols=19 Identities=16% Similarity=0.284 Sum_probs=14.9
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|.+.|...-.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2emp_A 9 GVKPYMCNECGKAFSVYSS 27 (46)
T ss_dssp CCCSEECSSSCCEESCHHH
T ss_pred CCcCeECCCCCchhCCHHH
Confidence 4689999999999875433
No 234
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.61 E-value=9.1 Score=21.86 Aligned_cols=21 Identities=24% Similarity=0.324 Sum_probs=15.9
Q ss_pred CCCCccccccccceeeeeecc
Q 042810 16 SNNPLMCPVGNIGIVLKQRCQ 36 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~ 36 (230)
...||.|++|...|......+
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2em5_A 9 STKSHQCHECGRGFTLKSHLN 29 (46)
T ss_dssp CSCSEECSSSCCEESSHHHHH
T ss_pred CCCCeECCcCCCccCCHHHHH
Confidence 468999999999987654433
No 235
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.49 E-value=9.5 Score=21.71 Aligned_cols=19 Identities=21% Similarity=0.407 Sum_probs=15.0
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|.+.|.....
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2eml_A 9 GEKPYECSVCGKAFSHRQS 27 (46)
T ss_dssp SCCSEECSSSCCEESSHHH
T ss_pred CCCCeeCCCcCCccCCHHH
Confidence 4689999999999875443
No 236
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=43.32 E-value=26 Score=24.70 Aligned_cols=53 Identities=17% Similarity=0.422 Sum_probs=35.7
Q ss_pred CCCccccCchhhhhhhhhhccccccCce-eEEeCCCCccchhhHHHhh-ccCCcccccccCcc
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQ-LITMPCHHIFHASCISRWL-EEQNSCPMCRRQIQ 224 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~-v~~LpC~H~FH~~CI~~Wl-~~~~tCP~CR~~i~ 224 (230)
....|.||-+++-.. ..++. +..--|+--.|..|+.--. +-.+.||-|+.+..
T Consensus 15 ~~qiCqiCGD~VG~~--------~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCktrYk 69 (93)
T 1weo_A 15 DGQFCEICGDQIGLT--------VEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYK 69 (93)
T ss_dssp SSCBCSSSCCBCCBC--------SSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCC
T ss_pred CCCccccccCccccC--------CCCCEEEeeeccCChhhHHHHHHHHhccCccccccCCccc
Confidence 357899999986441 11322 2233488788999986543 34678999998875
No 237
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=43.30 E-value=11 Score=25.67 Aligned_cols=41 Identities=20% Similarity=0.453 Sum_probs=28.2
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCcccc
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYE 226 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~ 226 (230)
....|+-|-..+. ++.+ ..-+..||..|. +|-.|+..+..+
T Consensus 24 ~~~~C~~C~~~I~------------~~~v--~a~~~~~H~~CF--------~C~~C~~~L~~~ 64 (90)
T 2dar_A 24 RTPMCAHCNQVIR------------GPFL--VALGKSWHPEEF--------NCAHCKNTMAYI 64 (90)
T ss_dssp CCCBBSSSCCBCC------------SCEE--EETTEEECTTTC--------BCSSSCCBCSSS
T ss_pred CCCCCccCCCEec------------ceEE--EECCccccccCC--------ccCCCCCCCCCC
Confidence 3578999988763 2222 335778888886 688888877644
No 238
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.28 E-value=9.2 Score=21.77 Aligned_cols=19 Identities=16% Similarity=0.441 Sum_probs=14.8
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|...|.....
T Consensus 9 ~~~~~~C~~C~k~f~~~~~ 27 (46)
T 2eoq_A 9 GEKPFKCDICGKSFCGRSR 27 (46)
T ss_dssp SSCSCCCSSSCCCCSSHHH
T ss_pred CCCCcCCCcCCchhCCHHH
Confidence 4679999999999875433
No 239
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.07 E-value=9.2 Score=21.76 Aligned_cols=20 Identities=10% Similarity=0.114 Sum_probs=15.6
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|.+.|...-..
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L 28 (46)
T 2eq0_A 9 GEKPYKCHECGKVFRRNSHL 28 (46)
T ss_dssp CCCCEECTTTCCEESSHHHH
T ss_pred CCCCeECCCCCchhCCHHHH
Confidence 46899999999998765433
No 240
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.98 E-value=9.5 Score=21.75 Aligned_cols=18 Identities=11% Similarity=0.139 Sum_probs=14.5
Q ss_pred CCCCccccccccceeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQ 33 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~ 33 (230)
...||.|++|...|...-
T Consensus 9 ~~k~~~C~~C~k~F~~~~ 26 (46)
T 2eoo_A 9 GERPYGCNECGKNFGRHS 26 (46)
T ss_dssp CCCCEECSSSCCEESSHH
T ss_pred CCCCEEccccCcccCCHH
Confidence 467999999999987543
No 241
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.89 E-value=8.3 Score=21.91 Aligned_cols=20 Identities=15% Similarity=0.245 Sum_probs=15.5
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|.+.|......
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L 28 (45)
T 2epu_A 9 GQKPFECTHCGKSFRAKGNL 28 (45)
T ss_dssp SCCSEEETTTTEEESSHHHH
T ss_pred CCcCccCCCCCCccCChHHH
Confidence 45799999999998765433
No 242
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.86 E-value=9.2 Score=21.71 Aligned_cols=19 Identities=5% Similarity=0.074 Sum_probs=15.0
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|...|...-.
T Consensus 9 ~~~~~~C~~C~k~f~~~~~ 27 (46)
T 2en8_A 9 GEKSHTCDECGKNFCYISA 27 (46)
T ss_dssp CCSSEECTTTCCEESSHHH
T ss_pred CCCCeECCCcCcccCCHHH
Confidence 4679999999999875443
No 243
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=42.85 E-value=7.6 Score=22.83 Aligned_cols=20 Identities=10% Similarity=0.233 Sum_probs=15.8
Q ss_pred CCCccccccccceeeeeecc
Q 042810 17 NNPLMCPVGNIGIVLKQRCQ 36 (230)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~ 36 (230)
..||.|++|.+.|......+
T Consensus 5 ~kp~~C~~C~k~F~~~~~L~ 24 (48)
T 3iuf_A 5 DKPYACDICGKRYKNRPGLS 24 (48)
T ss_dssp TSCEECTTTCCEESSHHHHH
T ss_pred CcCEECCCcCcccCCHHHHH
Confidence 57999999999997655444
No 244
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.83 E-value=9.5 Score=21.71 Aligned_cols=19 Identities=21% Similarity=0.296 Sum_probs=14.8
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|...|.....
T Consensus 9 ~~k~~~C~~C~k~F~~~~~ 27 (46)
T 2emy_A 9 GENPYECHECGKAFSRKYQ 27 (46)
T ss_dssp SSCCEECSSSCCEESSHHH
T ss_pred CCcCcCCCCCCcccCcHHH
Confidence 4679999999999875433
No 245
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=42.79 E-value=11 Score=30.78 Aligned_cols=49 Identities=22% Similarity=0.526 Sum_probs=32.6
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhc--------cCCcccccccCc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLE--------EQNSCPMCRRQI 223 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~--------~~~tCP~CR~~i 223 (230)
+..|.+|...|... ..+-..-.||++||..|-..+.. ..+.|-.|-..+
T Consensus 164 ~~~C~~C~~~F~~~----------~RrhHCR~CG~v~C~~Cs~~~~~~p~~~~~~~~RVC~~C~~~l 220 (226)
T 3zyq_A 164 AEECHRCRVQFGVM----------TRKHHCRACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCYEQL 220 (226)
T ss_dssp CSBCTTTCCBCBTT----------BCCEECTTTCCEECTTTCCEEEEEGGGTEEEEEEECHHHHHHH
T ss_pred CCCCcCcCCCCCcc----------ccccccCCCcCEeChhhcCCcccCCCCCCCCCCEeCHHHHHHh
Confidence 56999999998661 22233335999999999876532 234577775544
No 246
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Probab=42.71 E-value=11 Score=23.85 Aligned_cols=41 Identities=12% Similarity=0.322 Sum_probs=27.4
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCccccC
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYED 227 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~~ 227 (230)
...|+.|-+.+.. ..+..=+..||..|. +|-.|+..+..+.
T Consensus 5 ~~~C~~C~~~I~~--------------~~~~a~~~~~H~~CF--------~C~~C~~~L~~~~ 45 (66)
T 1nyp_A 5 VPICGACRRPIEG--------------RVVNAMGKQWHVEHF--------VCAKCEKPFLGHR 45 (66)
T ss_dssp CCEETTTTEECCS--------------CEECCTTSBEETTTC--------BCTTTCCBCSSSC
T ss_pred CCCCcccCCEecc--------------eEEEECccccccCcC--------EECCCCCCCCCCc
Confidence 4578888887632 223346778888885 5888888776543
No 247
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.67 E-value=9.6 Score=21.69 Aligned_cols=20 Identities=10% Similarity=0.160 Sum_probs=15.4
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|...|...-..
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2yu8_A 9 GEKPYKCNECGKVFTQNSHL 28 (46)
T ss_dssp CCSSEECSSSCCEESSSHHH
T ss_pred CCCCeECCcCCchhCCHHHH
Confidence 46899999999998765433
No 248
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=42.64 E-value=6.5 Score=25.30 Aligned_cols=23 Identities=35% Similarity=0.915 Sum_probs=16.3
Q ss_pred CC-CccchhhHHHhhcc----CCccccccc
Q 042810 197 CH-HIFHASCISRWLEE----QNSCPMCRR 221 (230)
Q Consensus 197 C~-H~FH~~CI~~Wl~~----~~tCP~CR~ 221 (230)
|. ..||..|+. +.. +-.||.|++
T Consensus 30 C~~~wfH~~Cvg--l~~~p~~~w~Cp~C~~ 57 (59)
T 3c6w_A 30 CPIEWFHFACVD--LTTKPKGKWFCPRCVQ 57 (59)
T ss_dssp CSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CCCCCEecccCC--cccCCCCCEECcCccC
Confidence 55 699999997 332 226999975
No 249
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.55 E-value=10 Score=21.53 Aligned_cols=20 Identities=10% Similarity=0.238 Sum_probs=15.3
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|.+.|...-..
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L 28 (46)
T 2eop_A 9 GEKPHECRECGKSFSFNSQL 28 (46)
T ss_dssp CCCSCBCTTTCCBCSSHHHH
T ss_pred CCCCeeCCCCCchhCCHHHH
Confidence 46799999999998764433
No 250
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.54 E-value=9.6 Score=21.68 Aligned_cols=19 Identities=16% Similarity=0.417 Sum_probs=14.8
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|.+.|...-.
T Consensus 9 ~~k~~~C~~C~k~F~~~~~ 27 (46)
T 2emh_A 9 GERPYICTVCGKAFTDRSN 27 (46)
T ss_dssp CCCSEECTTTCCEESSHHH
T ss_pred CCCCcCCCCCCchhCCHHH
Confidence 4689999999999875433
No 251
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.52 E-value=10 Score=21.57 Aligned_cols=20 Identities=10% Similarity=0.064 Sum_probs=15.3
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|.+.|-..-..
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2epz_A 9 GEKPFDCIDCGKAFSDHIGL 28 (46)
T ss_dssp CCCSBCCTTTCCCBSSHHHH
T ss_pred CCCCeECCCCCceeCCHHHH
Confidence 46799999999998754433
No 252
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=42.41 E-value=5.3 Score=35.46 Aligned_cols=52 Identities=13% Similarity=0.237 Sum_probs=0.0
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhc-------cCCcccccccCcc
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLE-------EQNSCPMCRRQIQ 224 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~-------~~~tCP~CR~~i~ 224 (230)
.+...|.+|...|... ...-..-.||++||..|...++. ..+.|-.|-..+.
T Consensus 373 ~~~~~c~~c~~~f~~~----------~r~h~Cr~Cg~~~C~~Cs~~~~~~~~~~~~~~rvC~~C~~~l~ 431 (434)
T 3mpx_A 373 THVMMCMNCGCDFSLT----------LRRHHCHACGKIVCRNCSRNKYPLKYLKDRMAKVCDGCFGELK 431 (434)
T ss_dssp ---------------------------------------------------------------------
T ss_pred ccCCcCCCcCCCCCCc----------chhhhcccCcCEeehhhCCCeeeCCCCCCCcCEecHHHHHHHH
Confidence 3467899999988651 12233345999999999977642 2356877766554
No 253
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.26 E-value=8.6 Score=21.96 Aligned_cols=19 Identities=26% Similarity=0.492 Sum_probs=15.0
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|...|.....
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2eoz_A 9 GEKPYSCNVCGKAFVLSAH 27 (46)
T ss_dssp SCCSEEETTTTEEESSHHH
T ss_pred CCCCeECcccChhhCCHHH
Confidence 4679999999999876443
No 254
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=42.25 E-value=10 Score=21.64 Aligned_cols=20 Identities=25% Similarity=0.272 Sum_probs=15.4
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|.+.|......
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2el6_A 9 GVNPYKCSQCEKSFSGKLRL 28 (46)
T ss_dssp CCCSEECSSSSCEESSHHHH
T ss_pred CCCCeECCCCCcccCCHHHH
Confidence 46799999999998754433
No 255
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.08 E-value=9.8 Score=21.70 Aligned_cols=19 Identities=16% Similarity=0.249 Sum_probs=14.8
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|.+.|...-.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2ytt_A 9 GEKPYQCSECGKSFSGSYR 27 (46)
T ss_dssp CCCTTCCSSSCCCCSSHHH
T ss_pred CCCCeeCCCCCcccCCHHH
Confidence 4679999999998875433
No 256
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=42.04 E-value=11 Score=30.61 Aligned_cols=37 Identities=19% Similarity=0.442 Sum_probs=26.1
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhh
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWL 210 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl 210 (230)
++..|.+|...|... ..+-..-.||++||..|.....
T Consensus 160 ~~~~C~~C~~~F~~~----------~rrhhCr~CG~v~C~~Cs~~~~ 196 (220)
T 1dvp_A 160 DGRVCHRCRVEFTFT----------NRKHHCRNCGQVFCGQCTAKQC 196 (220)
T ss_dssp CCSBCTTTCCBCCSS----------SCCEECTTTCCEECSTTSCEEE
T ss_pred CCCccCCCCCccCCc----------ccccccCCcCCEEChHHhCCee
Confidence 357999999988651 2223333599999999987653
No 257
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.00 E-value=9.9 Score=21.67 Aligned_cols=21 Identities=10% Similarity=0.124 Sum_probs=16.0
Q ss_pred CCCCccccccccceeeeeecc
Q 042810 16 SNNPLMCPVGNIGIVLKQRCQ 36 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~ 36 (230)
...||.|++|.+.|...-..+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2emf_A 9 GGKHFECTECGKAFTRKSTLS 29 (46)
T ss_dssp SSCCEECSSSCCEESCHHHHH
T ss_pred CCCCeECCCCCchhCCHHHHH
Confidence 468999999999997654433
No 258
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=41.97 E-value=10 Score=21.50 Aligned_cols=20 Identities=10% Similarity=0.129 Sum_probs=15.3
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|...|......
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2em9_A 9 GEKPYNCKECGKSFRWASCL 28 (46)
T ss_dssp CCCSEECSSSCCEESSHHHH
T ss_pred CCcCeECCccccccCChHHH
Confidence 46799999999998754433
No 259
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.82 E-value=10 Score=21.70 Aligned_cols=18 Identities=11% Similarity=0.132 Sum_probs=14.4
Q ss_pred CCCCccccccccceeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQ 33 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~ 33 (230)
...||.|++|.+.|...-
T Consensus 9 ~~k~~~C~~C~k~f~~~~ 26 (46)
T 2ytm_A 9 GEKPYKCMECGKAFGDNS 26 (46)
T ss_dssp SCCSSSBTTTTBCCSSHH
T ss_pred CCCCcCCCCCCchhCCHH
Confidence 467999999999887543
No 260
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.74 E-value=11 Score=21.46 Aligned_cols=19 Identities=16% Similarity=0.275 Sum_probs=14.9
Q ss_pred cCCCCccccccccceeeee
Q 042810 15 CSNNPLMCPVGNIGIVLKQ 33 (230)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~ 33 (230)
....||.|++|...|....
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (46)
T 2em8_A 8 SGEKPYKCVECGKGYKRRL 26 (46)
T ss_dssp CSCCSEECSSSCCEESSHH
T ss_pred CCCCCeECcccCchhCCHH
Confidence 3568999999999987543
No 261
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.69 E-value=10 Score=21.54 Aligned_cols=20 Identities=5% Similarity=-0.051 Sum_probs=15.4
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|...|......
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2eq4_A 9 GEKLYNCKECGKSFSRAPCL 28 (46)
T ss_dssp CCCCCCBTTTTBCCSCHHHH
T ss_pred CCCCeECCCCCCccCchHHH
Confidence 46799999999998765433
No 262
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.50 E-value=10 Score=21.55 Aligned_cols=20 Identities=10% Similarity=0.230 Sum_probs=15.4
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|...|......
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2ytr_A 9 GEKPYKCNECGKAFSQTSKL 28 (46)
T ss_dssp SCCTTCCTTTCCCCSSHHHH
T ss_pred CCcCcCCCCCCCccCCHHHH
Confidence 46899999999998754433
No 263
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.49 E-value=11 Score=21.48 Aligned_cols=19 Identities=11% Similarity=0.455 Sum_probs=14.7
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|...|...-.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2ytj_A 9 GEKPYICAECGKAFTIRSN 27 (46)
T ss_dssp SCCSEECSSSCCEESSHHH
T ss_pred CCcCeECCCCChhhCCHHH
Confidence 4679999999998875433
No 264
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.48 E-value=11 Score=21.24 Aligned_cols=19 Identities=16% Similarity=0.298 Sum_probs=14.9
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|.+.|.....
T Consensus 7 ~~k~~~C~~C~k~f~~~~~ 25 (44)
T 2emx_A 7 GEKPFGCSCCEKAFSSKSY 25 (44)
T ss_dssp SCCCEECSSSSCEESSHHH
T ss_pred CCcCccCCCCCcccCCHHH
Confidence 4679999999999876443
No 265
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.46 E-value=11 Score=21.50 Aligned_cols=18 Identities=11% Similarity=0.233 Sum_probs=14.4
Q ss_pred CCCCccccccccceeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQ 33 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~ 33 (230)
...||.|++|...|...-
T Consensus 9 ~~k~~~C~~C~k~f~~~~ 26 (46)
T 2ytd_A 9 GEKPYKCSECGKAFHRHT 26 (46)
T ss_dssp CCCSEECSSSCCEESSHH
T ss_pred CCcCeECCCCCCeeCChH
Confidence 467999999999886543
No 266
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=41.36 E-value=8.5 Score=24.01 Aligned_cols=16 Identities=19% Similarity=0.364 Sum_probs=12.5
Q ss_pred CCCCccccccccceee
Q 042810 16 SNNPLMCPVGNIGIVL 31 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~ 31 (230)
...||.|++|...|..
T Consensus 11 ~~k~~~C~~C~k~F~~ 26 (62)
T 1vd4_A 11 NRASFKCPVCSSTFTD 26 (62)
T ss_dssp SSSEEECSSSCCEEEH
T ss_pred CCCCccCCCCCchhcc
Confidence 4678999999888854
No 267
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=41.35 E-value=14 Score=25.17 Aligned_cols=42 Identities=14% Similarity=0.408 Sum_probs=28.7
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCccccC
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYED 227 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~~ 227 (230)
....|+-|.+.+.. ..+..-+..||..|. +|-.|+..+..+.
T Consensus 24 ~~~~C~~C~~~I~~--------------~~~~a~~~~~H~~CF--------~C~~C~~~L~~~~ 65 (89)
T 1x64_A 24 RMPLCDKCGSGIVG--------------AVVKARDKYRHPECF--------VCADCNLNLKQKG 65 (89)
T ss_dssp SCCBCTTTCCBCCS--------------CCEESSSCEECTTTC--------CCSSSCCCTTTSC
T ss_pred cCCCcccCCCEecc--------------cEEEECCceECccCC--------EecCCCCCCCCCC
Confidence 35689999887633 123346788998886 5888888776543
No 268
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=41.33 E-value=11 Score=23.96 Aligned_cols=26 Identities=15% Similarity=0.203 Sum_probs=17.4
Q ss_pred eeeeccCCCCccccccccceeeeeec
Q 042810 10 EGTGSCSNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 35 (230)
...+.....||.|++|...|...-..
T Consensus 8 ~~~~~~~~~~~~C~~C~k~f~~~~~l 33 (74)
T 2lce_A 8 HSHMTHSDKPYKCDRCQASFRYKGNL 33 (74)
T ss_dssp ---CCCCCCSBCCTTSSCCBSCHHHH
T ss_pred cccccCCCCCeECCCCCceeCCHHHH
Confidence 34556677899999999988755433
No 269
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.31 E-value=10 Score=21.68 Aligned_cols=19 Identities=5% Similarity=-0.036 Sum_probs=14.9
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|.+.|...-.
T Consensus 9 ~~k~~~C~~C~k~F~~~~~ 27 (46)
T 2eom_A 9 GERGHRCSDCGKFFLQASN 27 (46)
T ss_dssp CCSSCCCSSSCCCCSSHHH
T ss_pred CCCCcCCCCCCCeeCChHH
Confidence 4679999999999875433
No 270
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.26 E-value=11 Score=21.44 Aligned_cols=19 Identities=16% Similarity=0.221 Sum_probs=15.0
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|.+.|...-.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2ytq_A 9 GEKPYGCSECGKAFSSKSY 27 (46)
T ss_dssp CCCSCBCSSSCCBCSCHHH
T ss_pred CCCCcCCCccChhhCChHH
Confidence 4689999999999876443
No 271
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=41.18 E-value=15 Score=23.47 Aligned_cols=40 Identities=20% Similarity=0.550 Sum_probs=25.8
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCcccc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYE 226 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~ 226 (230)
...|+-|...+.. + .+..-+..||..|. +|-.|+.++..+
T Consensus 5 ~~~C~~C~~~I~~------------~--~~~a~~~~~H~~CF--------~C~~C~~~L~~~ 44 (70)
T 2d8z_A 5 SSGCVQCKKPITT------------G--GVTYREQPWHKECF--------VCTACRKQLSGQ 44 (70)
T ss_dssp CCBCSSSCCBCCS------------S--EEESSSSEEETTTS--------BCSSSCCBCTTS
T ss_pred CCCCcccCCeecc------------c--eEEECccccCCCCC--------ccCCCCCcCCcC
Confidence 4578888877633 1 13345777888875 577787776543
No 272
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=41.06 E-value=10 Score=22.70 Aligned_cols=17 Identities=29% Similarity=0.487 Sum_probs=14.0
Q ss_pred CCCCccccccccceeee
Q 042810 16 SNNPLMCPVGNIGIVLK 32 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~ 32 (230)
...||.|++|...|...
T Consensus 21 ~~k~~~C~~C~k~f~~~ 37 (54)
T 1yui_A 21 SEQPATCPICYAVIRQS 37 (54)
T ss_dssp SSCCEECTTTCCEESSH
T ss_pred CCCCccCCCCCcccCCH
Confidence 46799999999998654
No 273
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.96 E-value=11 Score=21.46 Aligned_cols=19 Identities=16% Similarity=0.251 Sum_probs=14.9
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|...|...-.
T Consensus 9 ~~k~~~C~~C~k~F~~~~~ 27 (46)
T 2elz_A 9 VEKPYKCEDCGKGYNRRLN 27 (46)
T ss_dssp CCSSCBCSSSCCBCSSHHH
T ss_pred CCCCeeCcccCchhCCHHH
Confidence 4679999999999865433
No 274
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.94 E-value=11 Score=21.47 Aligned_cols=21 Identities=10% Similarity=0.173 Sum_probs=16.0
Q ss_pred CCCCccccccccceeeeeecc
Q 042810 16 SNNPLMCPVGNIGIVLKQRCQ 36 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~ 36 (230)
...||.|++|...|...-..+
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytg_A 9 GEKPFKCGECGKSYNQRVHLT 29 (46)
T ss_dssp SCCSEECTTTCCEESSSHHHH
T ss_pred CCCCeECCCCCcccCCHHHHH
Confidence 468999999999987654433
No 275
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.85 E-value=11 Score=21.43 Aligned_cols=19 Identities=16% Similarity=0.412 Sum_probs=15.0
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|.+.|.....
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2enc_A 9 GEKPFKCEECGKGFYTNSQ 27 (46)
T ss_dssp CCCSEECSSSCCEESSHHH
T ss_pred CCCCcCCCCCCCcCCChHH
Confidence 4679999999999876443
No 276
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.77 E-value=11 Score=21.36 Aligned_cols=19 Identities=11% Similarity=0.253 Sum_probs=14.9
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|...|.....
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2emm_A 9 GERPHKCNECGKSFIQSAH 27 (46)
T ss_dssp CCCSEECSSSCCEESSHHH
T ss_pred CCCCeeCCCCChhhCCHHH
Confidence 4689999999999875443
No 277
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.25 E-value=11 Score=21.37 Aligned_cols=20 Identities=10% Similarity=0.159 Sum_probs=15.5
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|.+.|...-..
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L 28 (46)
T 2ytn_A 9 GKKPYKCNECGKVFTQNSHL 28 (46)
T ss_dssp CCSSCBCTTTCCBCSSHHHH
T ss_pred CCcCeECCCCCCeeCCHHHH
Confidence 46899999999998765443
No 278
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=39.91 E-value=7.2 Score=25.12 Aligned_cols=23 Identities=35% Similarity=0.953 Sum_probs=16.1
Q ss_pred CC-CccchhhHHHhhcc----CCccccccc
Q 042810 197 CH-HIFHASCISRWLEE----QNSCPMCRR 221 (230)
Q Consensus 197 C~-H~FH~~CI~~Wl~~----~~tCP~CR~ 221 (230)
|. ..||..|+. +.. +-.||.|++
T Consensus 31 C~~~wfH~~Cvg--l~~~p~g~w~C~~C~~ 58 (60)
T 2vnf_A 31 CSIEWFHFACVG--LTTKPRGKWFCPRCSQ 58 (60)
T ss_dssp CSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CCCceEehhcCC--CCcCCCCCEECcCccC
Confidence 44 689999997 332 226999965
No 279
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=39.87 E-value=4.9 Score=26.19 Aligned_cols=23 Identities=48% Similarity=0.996 Sum_probs=16.2
Q ss_pred CC-CccchhhHHHhhcc----CCccccccc
Q 042810 197 CH-HIFHASCISRWLEE----QNSCPMCRR 221 (230)
Q Consensus 197 C~-H~FH~~CI~~Wl~~----~~tCP~CR~ 221 (230)
|. ..||..|+. +.. +-.||.|+.
T Consensus 32 C~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~ 59 (62)
T 2g6q_A 32 CPIEWFHFSCVS--LTYKPKGKWYCPKCRG 59 (62)
T ss_dssp CSSCEEETGGGT--CSSCCSSCCCCHHHHT
T ss_pred CCcccEecccCC--cCcCCCCCEECcCccc
Confidence 44 799999996 222 236999975
No 280
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=39.64 E-value=9.5 Score=23.62 Aligned_cols=30 Identities=30% Similarity=0.537 Sum_probs=19.8
Q ss_pred eEEeCCCCccchhhHHHhh---ccCCccccccc
Q 042810 192 LITMPCHHIFHASCISRWL---EEQNSCPMCRR 221 (230)
Q Consensus 192 v~~LpC~H~FH~~CI~~Wl---~~~~tCP~CR~ 221 (230)
+..-.|...||..|+.--- ..+-.||.|+.
T Consensus 19 I~Cd~C~~W~H~~Cvgi~~~~~~~~~~C~~C~~ 51 (52)
T 3o7a_A 19 IECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 51 (52)
T ss_dssp EECTTTCCEEETTTTTCCGGGCCSSCCCHHHHT
T ss_pred EEcCCCCccccccccCCCcccCCCcEECcCCCC
Confidence 3333499999999995322 22346999975
No 281
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.44 E-value=11 Score=21.34 Aligned_cols=18 Identities=6% Similarity=-0.093 Sum_probs=14.3
Q ss_pred CCCCccccccccceeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQ 33 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~ 33 (230)
...||.|++|...|-...
T Consensus 9 ~~~~~~C~~C~k~f~~~~ 26 (46)
T 2yso_A 9 REKSHQCRECGEIFFQYV 26 (46)
T ss_dssp CCCCEECTTTCCEESSHH
T ss_pred CCCCEEccccChhhCCHH
Confidence 467999999999886543
No 282
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=39.24 E-value=14 Score=28.64 Aligned_cols=48 Identities=21% Similarity=0.417 Sum_probs=33.0
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCC--ccccccc
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQN--SCPMCRR 221 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~--tCP~CR~ 221 (230)
.+..|++|...|... .+.......|.|.+|..|- .|..... .|-+|+.
T Consensus 67 ~~~~C~~C~~~fg~l---------~~~g~~C~~C~~~VC~~C~-~~~~~~~~W~C~vC~k 116 (153)
T 2zet_C 67 NETHCARCLQPYRLL---------LNSRRQCLECSLFVCKSCS-HAHPEEQGWLCDPCHL 116 (153)
T ss_dssp GGTBCTTTCCBGGGC---------SSCCEECTTTCCEECGGGE-ECCSSSSSCEEHHHHH
T ss_pred CCccchhhcCccccc---------cCCCCcCCCCCchhhcccc-cccCCCCcEeeHHHHH
Confidence 478999999987652 1444555669999999997 3543322 4777754
No 283
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=39.17 E-value=17 Score=25.29 Aligned_cols=48 Identities=21% Similarity=0.398 Sum_probs=30.9
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhc-------cCCccccccc
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLE-------EQNSCPMCRR 221 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~-------~~~tCP~CR~ 221 (230)
+...|.+|...|... ...-..-.||++||..|...... ..+.|-.|-.
T Consensus 8 ~~~~C~~C~~~F~~~----------~RrHHCR~CG~vfC~~Cs~~~~~lp~~g~~~~RVC~~C~~ 62 (88)
T 1wfk_A 8 MESRCYGCAVKFTLF----------KKEYGCKNCGRAFCNGCLSFSALVPRAGNTQQKVCKQCHT 62 (88)
T ss_dssp CCSBCTTTCCBCCSS----------SCEEECSSSCCEEETTTSCEEEEETTTTSEEEEECHHHHH
T ss_pred cCCCCcCcCCcccCc----------cccccCCCCCCEEChhHcCCceeccccCCCcCEECHHHHH
Confidence 356899999998651 22233345999999999876431 2245666644
No 284
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.98 E-value=10 Score=21.52 Aligned_cols=19 Identities=21% Similarity=0.289 Sum_probs=14.9
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|...|-....
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2ysp_A 9 GEKPYKCEKCGKGYNSKFN 27 (46)
T ss_dssp SCCSEEETTTTEEESCHHH
T ss_pred CCCCeECCCCCCccCCHHH
Confidence 4679999999998875443
No 285
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=38.88 E-value=14 Score=23.70 Aligned_cols=42 Identities=17% Similarity=0.489 Sum_probs=27.5
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCcccc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYE 226 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~ 226 (230)
...|+-|...+.+ ++. ....-+..||..|. +|-.|+.++..+
T Consensus 5 ~~~C~~C~~~I~~-----------~~~-~~~a~~~~~H~~CF--------~C~~C~~~L~~~ 46 (72)
T 1wyh_A 5 SSGCSACGETVMP-----------GSR-KLEYGGQTWHEHCF--------LCSGCEQPLGSR 46 (72)
T ss_dssp CCBCSSSCCBCCS-----------SSC-EECSTTCCEETTTC--------BCTTTCCBTTTS
T ss_pred CCCCccCCCcccc-----------Ccc-EEEECccccCcccC--------eECCCCCcCCCC
Confidence 4578999887754 222 22336778888886 577787776554
No 286
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=38.87 E-value=4.4 Score=26.42 Aligned_cols=50 Identities=22% Similarity=0.466 Sum_probs=32.6
Q ss_pred cccCCCccccCch-hhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCC----ccccccc
Q 042810 161 LVKAGDNCAVCLE-ELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQN----SCPMCRR 221 (230)
Q Consensus 161 ~~~~~~~C~ICle-~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~----tCP~CR~ 221 (230)
...+...|.||+. .|.+ +..-..--|.-.||..|--.|-.+.+ .|-+||+
T Consensus 5 ~~~d~~~C~iC~KTKFAD-----------G~Gh~C~yCk~r~CaRCGg~v~lr~~k~~WvC~lC~k 59 (62)
T 2a20_A 5 QKGDAPTCGICHKTKFAD-----------GCGHNCSYCQTKFCARCGGRVSLRSNKVMWVCNLCRK 59 (62)
T ss_dssp CSSCCCCCSSSSCSCCCS-----------SCCEEBTTTCCEECTTSEEEEESSTTCEEEEEHHHHH
T ss_pred ccCCcchhhhhccceecc-----------CCCccccccCCeeecccCCEeeecCCeEEEEehhhhh
Confidence 3456789999965 4544 33333344888899999888743333 4888875
No 287
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=38.75 E-value=4.7 Score=22.21 Aligned_cols=14 Identities=29% Similarity=0.565 Sum_probs=10.5
Q ss_pred CCcccccccCcccc
Q 042810 213 QNSCPMCRRQIQYE 226 (230)
Q Consensus 213 ~~tCP~CR~~i~~~ 226 (230)
+.+||+|+...+..
T Consensus 3 k~~CpvCk~q~Pd~ 16 (28)
T 2jvx_A 3 DFCCPKCQYQAPDM 16 (28)
T ss_dssp CEECTTSSCEESSH
T ss_pred cccCccccccCcCh
Confidence 45799999877653
No 288
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=38.21 E-value=16 Score=24.20 Aligned_cols=42 Identities=21% Similarity=0.566 Sum_probs=28.4
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCcccc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYE 226 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~ 226 (230)
...|+.|...+.. ++.. +..=+..||..|. +|-.|+..+...
T Consensus 15 ~~~C~~C~~~I~~-----------~~~~-~~a~~~~~H~~CF--------~C~~C~~~L~~~ 56 (82)
T 1x63_A 15 SPKCKGCFKAIVA-----------GDQN-VEYKGTVWHKDCF--------TCSNCKQVIGTG 56 (82)
T ss_dssp SCBCSSSCCBCCS-----------SSCE-EECSSCEEETTTC--------CCSSSCCCCTTS
T ss_pred CCcCccCCccccc-----------CceE-EEECccccccccC--------chhhCCCccCCC
Confidence 4689999888754 3333 2335778888886 578888777654
No 289
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.19 E-value=10 Score=21.52 Aligned_cols=19 Identities=11% Similarity=0.195 Sum_probs=14.8
Q ss_pred CCCCccccccccceeeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQR 34 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (230)
...||.|++|...|...-.
T Consensus 9 ~~~~~~C~~C~k~F~~~~~ 27 (46)
T 2eoe_A 9 GEKPYKCNECGKVFTQNSH 27 (46)
T ss_dssp CCCSSEETTTTEECSSHHH
T ss_pred CCCCeECCCcChhhCCHHH
Confidence 4679999999998875443
No 290
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=38.17 E-value=9.7 Score=22.66 Aligned_cols=17 Identities=6% Similarity=-0.078 Sum_probs=8.9
Q ss_pred CCCccccccccceeeee
Q 042810 17 NNPLMCPVGNIGIVLKQ 33 (230)
Q Consensus 17 ~~~~~~~~~~~~~~~~~ 33 (230)
..||.|++|...|....
T Consensus 2 ~~~~~C~~C~~~f~~~~ 18 (57)
T 3uk3_C 2 SSSRECSYCGKFFRSNY 18 (57)
T ss_dssp ---CBCTTTCCBCSCHH
T ss_pred CCCccCCCCcchhCChH
Confidence 35677777776665443
No 291
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=38.02 E-value=9.2 Score=25.42 Aligned_cols=40 Identities=15% Similarity=0.365 Sum_probs=26.9
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCccc
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQY 225 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~ 225 (230)
....|+-|-+.+.. + .+..-+..||..|. +|-.|+..+..
T Consensus 14 ~~~~C~~C~~~I~~------------~--~~~a~~~~~H~~CF--------~C~~C~~~L~~ 53 (79)
T 1x62_A 14 KLPMCDKCGTGIVG------------V--FVKLRDRHRHPECY--------VCTDCGTNLKQ 53 (79)
T ss_dssp CCCCCSSSCCCCCS------------S--CEECSSCEECTTTT--------SCSSSCCCHHH
T ss_pred CCCccccCCCCccC------------c--EEEECcceeCcCcC--------eeCCCCCCCCC
Confidence 35689999887643 1 23345788998886 57777776643
No 292
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.94 E-value=11 Score=21.42 Aligned_cols=20 Identities=10% Similarity=0.253 Sum_probs=15.2
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|...|...-..
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L 28 (46)
T 2en1_A 9 GEKPFKCEECGKRFTQNSQL 28 (46)
T ss_dssp CCCSEEETTTTEEESSHHHH
T ss_pred CCCCeeCCCCCcccCCHHHH
Confidence 46799999999998764433
No 293
>2dj7_A Actin-binding LIM protein 3; LIM domain, Zn binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=37.91 E-value=15 Score=24.63 Aligned_cols=40 Identities=28% Similarity=0.644 Sum_probs=28.0
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCcc
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQ 224 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~ 224 (230)
....|+-|-..+.+ ++.+.. =+..||..|. +|-.|+..+.
T Consensus 14 ~~~~C~~C~~~I~~-----------~~~v~a--~~~~wH~~CF--------~C~~C~~~L~ 53 (80)
T 2dj7_A 14 GPSHCAGCKEEIKH-----------GQSLLA--LDKQWHVSCF--------KCQTCSVILT 53 (80)
T ss_dssp SCSCCTTTCCCCSS-----------SCCEEE--TTEEECTTTC--------BCSSSCCBCS
T ss_pred CCCCCcCcCCeeCC-----------CeEEEE--CCcccccccC--------CcCcCCCCcC
Confidence 46689999988754 444433 4677888875 5888887775
No 294
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=37.80 E-value=4.1 Score=26.91 Aligned_cols=25 Identities=28% Similarity=0.495 Sum_probs=16.7
Q ss_pred CCCccchhhHHHh---hc-----cCCccccccc
Q 042810 197 CHHIFHASCISRW---LE-----EQNSCPMCRR 221 (230)
Q Consensus 197 C~H~FH~~CI~~W---l~-----~~~tCP~CR~ 221 (230)
|...||..|+.-- .. .+-.||.||.
T Consensus 32 C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~ 64 (68)
T 2rsd_A 32 CQVWQHLNCVLIPDKPGESAEVPPVFYCELCRL 64 (68)
T ss_dssp TCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHH
T ss_pred CCCeEchhhCCCCcccccccCCCCcEECcCccC
Confidence 8889999998311 00 1236999974
No 295
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=37.66 E-value=12 Score=24.02 Aligned_cols=40 Identities=20% Similarity=0.578 Sum_probs=25.2
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCcccc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYE 226 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~ 226 (230)
...|+-|-+.+.. +.+ ..-+..||..|. +|-.|+..+...
T Consensus 5 ~~~C~~C~~~I~~------------~~~--~a~~~~~H~~CF--------~C~~C~~~L~~~ 44 (70)
T 2d8x_A 5 SSGCHQCGEFIIG------------RVI--KAMNNSWHPECF--------RCDLCQEVLADI 44 (70)
T ss_dssp SSBCSSSCCBCCS------------CCE--EETTEEECTTTS--------BCSSSCCBCSSS
T ss_pred CCcCccCCCEecc------------eEE--EECcccccccCC--------EeCCCCCcCCCC
Confidence 4578888776532 112 224667888775 577787776554
No 296
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.56 E-value=12 Score=23.40 Aligned_cols=22 Identities=18% Similarity=0.144 Sum_probs=17.0
Q ss_pred ccCCCCccccccccceeeeeecc
Q 042810 14 SCSNNPLMCPVGNIGIVLKQRCQ 36 (230)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~ 36 (230)
.|...||.|+.|...|. ....+
T Consensus 5 ~C~~~~~~C~~C~k~f~-~~~L~ 26 (66)
T 2eod_A 5 SSGKRTQPCTYCTKEFV-FDTIQ 26 (66)
T ss_dssp CCCCCEEECSSSCCEEE-HHHHH
T ss_pred cCCCCCeeccccCCccC-HHHHH
Confidence 57888999999999987 44433
No 297
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.45 E-value=11 Score=21.42 Aligned_cols=18 Identities=17% Similarity=0.222 Sum_probs=14.4
Q ss_pred CCCCccccccccceeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQ 33 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~ 33 (230)
...||.|++|.+.|...-
T Consensus 9 ~~~~~~C~~C~k~f~~~~ 26 (46)
T 2en6_A 9 GEKPYGCNECGKTFSQKS 26 (46)
T ss_dssp SSCCEEETTTTEEESSHH
T ss_pred CCcCeECCCCCcccCchH
Confidence 467999999999887543
No 298
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=37.43 E-value=13 Score=19.06 Aligned_cols=15 Identities=20% Similarity=0.348 Sum_probs=12.1
Q ss_pred CCcccc--ccccceeee
Q 042810 18 NPLMCP--VGNIGIVLK 32 (230)
Q Consensus 18 ~~~~~~--~~~~~~~~~ 32 (230)
.||.|+ .|...|...
T Consensus 2 k~~~C~~~~C~k~f~~~ 18 (32)
T 1zfd_A 2 RPYSCDHPGCDKAFVRN 18 (32)
T ss_dssp CSBCCCCTTCCCCBSSS
T ss_pred CCCcCcCCCCCCccCCH
Confidence 589999 899888654
No 299
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=37.18 E-value=18 Score=23.60 Aligned_cols=44 Identities=18% Similarity=0.523 Sum_probs=28.2
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCccccC
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYED 227 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~~ 227 (230)
....|+-|.+.+.. .+.+.. .-+..||..|. +|-.|+.++....
T Consensus 10 ~~~~C~~C~~~I~~-----------~~~~~~-a~~~~~H~~CF--------~C~~C~~~L~~~~ 53 (77)
T 1g47_A 10 ASATCERCKGGFAP-----------AEKIVN-SNGELYHEQCF--------VCAQCFQQFPEGL 53 (77)
T ss_dssp CCCBCSSSCCBCCS-----------TTTCEE-ETTEEECTTTC--------CCTTTCCCCGGGC
T ss_pred CCCCchhcCCccCC-----------CceEEE-eCccEeccccC--------eECCCCCCCCCCC
Confidence 46789999988754 222321 24667888875 5777777765543
No 300
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=37.16 E-value=17 Score=23.39 Aligned_cols=41 Identities=24% Similarity=0.675 Sum_probs=24.6
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCccc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQY 225 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~ 225 (230)
...|+.|-+.+.. .+.. ...=+..||..|. +|-.|+..+..
T Consensus 5 ~~~C~~C~~~I~~-----------~~~~-~~a~~~~~H~~CF--------~C~~C~~~L~~ 45 (72)
T 1x61_A 5 SSGCGGCGEDVVG-----------DGAG-VVALDRVFHVGCF--------VCSTCRAQLRG 45 (72)
T ss_dssp CCCCSSSCSCCCS-----------SSCC-EECSSSEECTTTC--------BCSSSCCBCTT
T ss_pred CCCCccCCCccCC-----------CceE-EEECCCeEcccCC--------cccccCCcCCc
Confidence 4578888776543 2212 2234677887775 57777777643
No 301
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=36.71 E-value=17 Score=23.37 Aligned_cols=42 Identities=19% Similarity=0.524 Sum_probs=26.7
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCcccc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYE 226 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~ 226 (230)
...|+.|-+.+.+ .+.+. ..=+..||..|. +|-.|+..+...
T Consensus 5 ~~~C~~C~~~I~~-----------~~~~~-~a~~~~~H~~CF--------~C~~C~~~L~~~ 46 (72)
T 1x4k_A 5 SSGCQECKKTIMP-----------GTRKM-EYKGSSWHETCF--------ICHRCQQPIGTK 46 (72)
T ss_dssp CCCBSSSCCCCCS-----------SSCEE-EETTEEEETTTT--------CCSSSCCCCCSS
T ss_pred CCCCccCCCcccC-----------CceEE-EECcCeecccCC--------cccccCCccCCC
Confidence 3579999887754 32222 224667888875 577787776544
No 302
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=35.50 E-value=14 Score=22.00 Aligned_cols=19 Identities=16% Similarity=0.382 Sum_probs=13.7
Q ss_pred cCCCCccccccccceeeee
Q 042810 15 CSNNPLMCPVGNIGIVLKQ 33 (230)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~ 33 (230)
....||.|++|...|....
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (54)
T 2eps_A 8 SVGKPYICQSCGKGFSRPD 26 (54)
T ss_dssp CSSCCEECSSSCCEESSHH
T ss_pred CCCCCeECCCCCcccCCHH
Confidence 4457888888888886543
No 303
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=34.95 E-value=24 Score=24.44 Aligned_cols=38 Identities=21% Similarity=0.436 Sum_probs=28.4
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEeC--CCCccchhhHHHhhcc
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMP--CHHIFHASCISRWLEE 212 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~Lp--C~H~FH~~CI~~Wl~~ 212 (230)
.....|.+|.|.+++ .. -++-| =.|.||..|-+..+++
T Consensus 13 ~a~l~CtlC~erLEd-----------tH-FVQCPsv~~HkFCFpCsr~sIk~ 52 (93)
T 2cs3_A 13 SGPLCCTICHERLED-----------TH-FVQCPSVPSHKFCFPCSRESIKA 52 (93)
T ss_dssp CCSCCCSSSCSCCSS-----------TT-SEECSSCSSCEECHHHHHHHHHH
T ss_pred CCeeEeecchhhhcc-----------Cc-eeeCCCccCCeeeccccHHHHHh
Confidence 346689999999876 22 33444 5799999999998875
No 304
>2o35_A Hypothetical protein DUF1244; helix bundle, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.12A {Sinorhizobium meliloti} SCOP: a.293.1.1
Probab=34.70 E-value=12 Score=26.97 Aligned_cols=11 Identities=36% Similarity=1.132 Sum_probs=10.2
Q ss_pred cchhhHHHhhc
Q 042810 201 FHASCISRWLE 211 (230)
Q Consensus 201 FH~~CI~~Wl~ 211 (230)
||+.|+..|+.
T Consensus 43 FCRNCLskWy~ 53 (105)
T 2o35_A 43 FCRNCLSNWYR 53 (105)
T ss_dssp CCHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999985
No 305
>3fyb_A Protein of unknown function (DUF1244); hydrocar degrading, structural genomics, PSI-2; HET: PEG; 1.80A {Alcanivorax borkumensis SK2}
Probab=34.50 E-value=12 Score=26.90 Aligned_cols=11 Identities=36% Similarity=1.220 Sum_probs=10.2
Q ss_pred cchhhHHHhhc
Q 042810 201 FHASCISRWLE 211 (230)
Q Consensus 201 FH~~CI~~Wl~ 211 (230)
||+.|+..|+.
T Consensus 42 FCRNCLskWy~ 52 (104)
T 3fyb_A 42 FCRNCLAKWLM 52 (104)
T ss_dssp CCHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999985
No 306
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=33.81 E-value=13 Score=18.28 Aligned_cols=15 Identities=7% Similarity=-0.004 Sum_probs=11.3
Q ss_pred CCcccc--ccccceeee
Q 042810 18 NPLMCP--VGNIGIVLK 32 (230)
Q Consensus 18 ~~~~~~--~~~~~~~~~ 32 (230)
.||.|+ .|.+.|...
T Consensus 1 k~~~C~~~~C~k~f~~~ 17 (29)
T 2ab3_A 1 MVYVCHFENCGRSFNDR 17 (29)
T ss_dssp CCEEECSTTTCEEESSH
T ss_pred CCCCCcCCcCcCccCCH
Confidence 378899 998887643
No 307
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=33.63 E-value=29 Score=23.53 Aligned_cols=41 Identities=22% Similarity=0.726 Sum_probs=27.6
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCcccc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYE 226 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~ 226 (230)
...|+-|-+.+.. .+.+ ..-+..||..|. +|-.|+..+...
T Consensus 15 ~~~C~~C~~~I~~-----------~~~v--~a~~~~~H~~CF--------~C~~C~~~L~~~ 55 (91)
T 2d8y_A 15 RETCVECQKTVYP-----------MERL--LANQQVFHISCF--------RCSYCNNKLSLG 55 (91)
T ss_dssp SCBCTTTCCBCCT-----------TSEE--ECSSSEEETTTC--------BCTTTCCBCCTT
T ss_pred CCcCccCCCccCC-----------ceeE--EECCCEECCCCC--------eeCCCCCCCCCC
Confidence 5689999888754 3333 346778888885 466776666544
No 308
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=33.62 E-value=16 Score=22.50 Aligned_cols=17 Identities=18% Similarity=0.169 Sum_probs=13.3
Q ss_pred CCCCccccccccceeee
Q 042810 16 SNNPLMCPVGNIGIVLK 32 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~ 32 (230)
...||.|++|...|...
T Consensus 37 ~~~~~~C~~C~k~f~~~ 53 (66)
T 2drp_A 37 NVKVYPCPFCFKEFTRK 53 (66)
T ss_dssp SCCCEECTTTCCEESCH
T ss_pred CCcCeECCCCCCccCCH
Confidence 45789999999888643
No 309
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.28 E-value=17 Score=23.22 Aligned_cols=17 Identities=18% Similarity=0.286 Sum_probs=10.9
Q ss_pred CCCCccccccccceeee
Q 042810 16 SNNPLMCPVGNIGIVLK 32 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~ 32 (230)
...||.|++|...|...
T Consensus 4 ~~k~~~C~~C~k~f~~~ 20 (78)
T 2d9h_A 4 GSSGLQCEICGFTCRQK 20 (78)
T ss_dssp SCCCEECSSSCCEESSH
T ss_pred CCcCeECCCCCCeeCCH
Confidence 35677777777766543
No 310
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=33.19 E-value=8.8 Score=27.05 Aligned_cols=21 Identities=29% Similarity=0.838 Sum_probs=14.7
Q ss_pred CccchhhHHHhhcc----CCcccc-ccc
Q 042810 199 HIFHASCISRWLEE----QNSCPM-CRR 221 (230)
Q Consensus 199 H~FH~~CI~~Wl~~----~~tCP~-CR~ 221 (230)
..||..|+. |.. +-.||. |+.
T Consensus 50 eWfH~~CVg--l~~~p~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 50 EWFHYGCVG--LKQAPKGKWYCSKDCKE 75 (90)
T ss_dssp SCEETTTSS--CSSCTTSCCCSSHHHHH
T ss_pred ccCcCccCC--CCcCCCCCccCChhhcc
Confidence 689999995 221 226999 874
No 311
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=33.11 E-value=22 Score=23.78 Aligned_cols=41 Identities=39% Similarity=0.732 Sum_probs=26.8
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCccc
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQY 225 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~ 225 (230)
....|+.|-..+.. .+.+. .=+..||..|. +|-.|+..+..
T Consensus 14 ~~~~C~~C~~~I~~-----------~e~v~--a~~~~wH~~CF--------~C~~C~~~L~~ 54 (82)
T 2co8_A 14 AGDLCALCGEHLYV-----------LERLC--VNGHFFHRSCF--------RCHTCEATLWP 54 (82)
T ss_dssp SSCBCSSSCCBCCT-----------TTBCC--BTTBCCBTTTC--------BCSSSCCBCCT
T ss_pred CCCCCcccCCCccc-----------ceEEE--ECCCeeCCCcC--------EEcCCCCCcCC
Confidence 45789999887754 33332 34677888885 46667666544
No 312
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=31.97 E-value=15 Score=21.77 Aligned_cols=12 Identities=17% Similarity=0.266 Sum_probs=6.0
Q ss_pred Ccccccccccee
Q 042810 19 PLMCPVGNIGIV 30 (230)
Q Consensus 19 ~~~~~~~~~~~~ 30 (230)
||.|++|...|.
T Consensus 1 p~~C~~C~~~f~ 12 (57)
T 1bbo_A 1 KYICEECGIRXK 12 (57)
T ss_dssp CCBCTTTCCBCS
T ss_pred CCcCCCCcCcCC
Confidence 445555555443
No 313
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=31.47 E-value=17 Score=22.79 Aligned_cols=15 Identities=13% Similarity=0.344 Sum_probs=10.3
Q ss_pred CCCccccccccceee
Q 042810 17 NNPLMCPVGNIGIVL 31 (230)
Q Consensus 17 ~~~~~~~~~~~~~~~ 31 (230)
..||.|++|...|..
T Consensus 47 ~~~~~C~~C~~~f~~ 61 (73)
T 1f2i_G 47 QKPFQCRICMRNFSR 61 (73)
T ss_dssp CCCEECTTTCCEESC
T ss_pred CCCeECCCCCchhCC
Confidence 467777777777643
No 314
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=31.33 E-value=15 Score=24.33 Aligned_cols=41 Identities=22% Similarity=0.630 Sum_probs=26.5
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCcccc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYE 226 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~ 226 (230)
...|+.|-+.+.+ ++.+ ..-+..||..|. +|-.|+.++...
T Consensus 7 ~~~C~~C~~~I~~-----------~~~~--~a~~~~~H~~CF--------~C~~C~~~L~~~ 47 (81)
T 1a7i_A 7 GNKCGACGRTVYH-----------AEEV--QCDGRSFHRCCF--------LCMVCRKNLDST 47 (81)
T ss_dssp -CBCSSSCCBCSS-----------TTEE--EETTEEEESSSE--------ECSSSCCEECSS
T ss_pred CCcCcCcCccccC-----------ceeE--EeCCcccccccC--------ccCCCCCCCCCC
Confidence 4679999887754 3333 235677888875 477777766544
No 315
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=31.22 E-value=18 Score=23.90 Aligned_cols=23 Identities=26% Similarity=0.310 Sum_probs=16.6
Q ss_pred ccCCCCccccccccceeeeeecc
Q 042810 14 SCSNNPLMCPVGNIGIVLKQRCQ 36 (230)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~ 36 (230)
+.+..||.|++|...|-.....+
T Consensus 3 ~~~~~~~~C~~C~~~f~~~~~l~ 25 (96)
T 2dmd_A 3 SGSSGPHKCEVCGKCFSRKDKLK 25 (96)
T ss_dssp CCCCCCCCBTTTTBCCCCHHHHH
T ss_pred CCCCcCeECCCCCCccCCHHHHH
Confidence 45678999999998887554433
No 316
>1v6g_A Actin binding LIM protein 2; LIM domain, zinc binding domain, ablim2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=30.91 E-value=16 Score=24.16 Aligned_cols=39 Identities=21% Similarity=0.560 Sum_probs=23.8
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCccc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQY 225 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~ 225 (230)
...|+-|...+.. +.+ ..-+..||..|. +|-.|+..+..
T Consensus 15 ~~~C~~C~~~I~~------------~~v--~a~~~~wH~~CF--------~C~~C~~~L~~ 53 (81)
T 1v6g_A 15 GTRCFSCDQFIEG------------EVV--SALGKTYHPDCF--------VCAVCRLPFPP 53 (81)
T ss_dssp CCBCTTTCCBCCS------------CCE--EETTEEECTTTS--------SCSSSCCCCCS
T ss_pred CCcCccccCEecc------------ceE--EECCceeCccCC--------ccccCCCCCCC
Confidence 3579988886632 112 235677888875 46666666543
No 317
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=30.65 E-value=19 Score=21.62 Aligned_cols=18 Identities=17% Similarity=0.405 Sum_probs=14.0
Q ss_pred CCCCccccccccceeeee
Q 042810 16 SNNPLMCPVGNIGIVLKQ 33 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~ 33 (230)
...||.|++|...|....
T Consensus 27 ~~~~~~C~~C~~~f~~~~ 44 (60)
T 2adr_A 27 NEKPYPCGLCNRAFTRRD 44 (60)
T ss_dssp SSCSEECTTTCCEESSHH
T ss_pred CCCCccCCCCCCccCCHH
Confidence 357999999999886543
No 318
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=30.43 E-value=27 Score=31.10 Aligned_cols=44 Identities=20% Similarity=0.525 Sum_probs=29.9
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEe--CCCCccchhhHHHhhcc----------CCccccccc
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITM--PCHHIFHASCISRWLEE----------QNSCPMCRR 221 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~L--pC~H~FH~~CI~~Wl~~----------~~tCP~CR~ 221 (230)
.+..|.+|-+. ++-+..= .|...||.+||+.++.. .=.|=+|.-
T Consensus 92 ~~~yCr~C~~G--------------g~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p 147 (386)
T 2pv0_B 92 YQSYCSICCSG--------------ETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLP 147 (386)
T ss_dssp SBCSCTTTCCC--------------SSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSS
T ss_pred CcccceEcCCC--------------CeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCC
Confidence 35677777763 3334444 59999999999999843 125877754
No 319
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=30.08 E-value=13 Score=26.81 Aligned_cols=31 Identities=32% Similarity=0.662 Sum_probs=19.2
Q ss_pred eEEeC-CCCccchhhHHHhhc----c----CCcccccccC
Q 042810 192 LITMP-CHHIFHASCISRWLE----E----QNSCPMCRRQ 222 (230)
Q Consensus 192 v~~Lp-C~H~FH~~CI~~Wl~----~----~~tCP~CR~~ 222 (230)
+..-. |...||..|...-.. . .-.||.|+..
T Consensus 75 m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~ 114 (117)
T 4bbq_A 75 LMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQE 114 (117)
T ss_dssp CEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC--
T ss_pred eEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcCC
Confidence 44444 999999999864211 1 1359999753
No 320
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=30.07 E-value=23 Score=23.12 Aligned_cols=38 Identities=18% Similarity=0.528 Sum_probs=22.4
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCcc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQ 224 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~ 224 (230)
...|+-|-..+.. + .+..-+..||.+|. +|-.|+.++.
T Consensus 5 ~~~C~~C~~~I~~------------~--~v~a~~~~wH~~CF--------~C~~C~~~L~ 42 (73)
T 1wig_A 5 SSGCDSCEKYITG------------R--VLEAGEKHYHPSCA--------LCVRCGQMFA 42 (73)
T ss_dssp CCSCSSSCCCCSS------------C--CBCCSSCCBCTTTS--------CCSSSCCCCC
T ss_pred cCCcccCCCEecC------------e--eEEeCCCCCCCCcC--------EeCCCCCCCC
Confidence 3467777776532 1 12235677887775 4666666665
No 321
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=30.03 E-value=20 Score=23.06 Aligned_cols=18 Identities=28% Similarity=0.981 Sum_probs=12.2
Q ss_pred hhc-cCCcccccccCcccc
Q 042810 209 WLE-EQNSCPMCRRQIQYE 226 (230)
Q Consensus 209 Wl~-~~~tCP~CR~~i~~~ 226 (230)
|+. ..+.||.|+..|...
T Consensus 1 wi~~~~k~CP~C~~~Iek~ 19 (60)
T 1wd2_A 1 WIAANTKECPKCHVTIEKD 19 (60)
T ss_dssp CCCCCCCCCTTTCCCCSSC
T ss_pred CccccceECcCCCCeeEeC
Confidence 443 346799998888654
No 322
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=29.95 E-value=18 Score=23.54 Aligned_cols=24 Identities=13% Similarity=0.048 Sum_probs=18.2
Q ss_pred cCCCCccccccccceeeeeecccc
Q 042810 15 CSNNPLMCPVGNIGIVLKQRCQKV 38 (230)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~ 38 (230)
--..||+|+.|.+.|...-..+..
T Consensus 9 ~~ekpy~C~~CgK~F~~~s~L~~H 32 (66)
T 2epp_A 9 REAGILPCGLCGKVFTDANRLRQH 32 (66)
T ss_dssp CCCCCCCCTTTCCCCSCHHHHHHH
T ss_pred CCccCcCCCCCCCccCCHHHHHhh
Confidence 346899999999999876555433
No 323
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=29.25 E-value=21 Score=22.52 Aligned_cols=20 Identities=10% Similarity=0.086 Sum_probs=14.6
Q ss_pred CCCCccccccccceeeeeec
Q 042810 16 SNNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (230)
...||.|++|...|......
T Consensus 11 ~~k~~~C~~C~k~f~~~~~L 30 (72)
T 1x6e_A 11 GEKPYGCVECGKAFSRSSIL 30 (72)
T ss_dssp TCCCEECSSSCCEESSHHHH
T ss_pred CCCCccCCCCCCccCCHHHH
Confidence 35789999999888654433
No 324
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=29.07 E-value=21 Score=24.31 Aligned_cols=23 Identities=26% Similarity=0.317 Sum_probs=16.9
Q ss_pred ccCCCCccccccccceeeeeecc
Q 042810 14 SCSNNPLMCPVGNIGIVLKQRCQ 36 (230)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~ 36 (230)
+++..++.||+|.+.|...-...
T Consensus 23 ~~~~~~h~C~~Cgk~F~~~~~L~ 45 (85)
T 2lv2_A 23 SASAECHLCPVCGESFASKGAQE 45 (85)
T ss_dssp CCCCTTEECTTSCCEESSHHHHH
T ss_pred CCCCCCEECCCCCCCcCcHHHHh
Confidence 45667899999999987654444
No 325
>2cur_A Skeletal muscle LIM-protein 1; four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.93 E-value=14 Score=23.57 Aligned_cols=39 Identities=18% Similarity=0.556 Sum_probs=24.6
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCccc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQY 225 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~ 225 (230)
...|+-|-+.+.. +.+. .=+..||..|. +|-.|+.++..
T Consensus 5 ~~~C~~C~~~I~~------------~~~~--a~~~~~H~~CF--------~C~~C~~~L~~ 43 (69)
T 2cur_A 5 SSGCVKCNKAITS------------GGIT--YQDQPWHADCF--------VCVTCSKKLAG 43 (69)
T ss_dssp CCCCSSSCCCCCT------------TCEE--ETTEEECTTTT--------BCTTTCCBCTT
T ss_pred cCCCcccCCEeCc------------ceEE--ECccccccCcC--------EECCCCCCCCC
Confidence 4578888876632 2222 24667888775 57778777653
No 326
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=28.89 E-value=14 Score=21.15 Aligned_cols=19 Identities=11% Similarity=0.233 Sum_probs=13.3
Q ss_pred CCCccccccccceeeeeec
Q 042810 17 NNPLMCPVGNIGIVLKQRC 35 (230)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~ 35 (230)
-..|-||+|-..+......
T Consensus 3 ~EGFiCP~C~~~l~s~~~L 21 (34)
T 3mjh_B 3 SEGFICPQCMKSLGSADEL 21 (34)
T ss_dssp SEEEECTTTCCEESSHHHH
T ss_pred CcccCCcHHHHHcCCHHHH
Confidence 3468999998877654433
No 327
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=28.84 E-value=25 Score=22.24 Aligned_cols=42 Identities=17% Similarity=0.561 Sum_probs=28.1
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCcccc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYE 226 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~ 226 (230)
...|+-|...+.. ++.+.. .=+..||..|. +|-.|...+...
T Consensus 11 ~~~C~~C~~~i~~-----------~e~~~~-~~~~~~H~~CF--------~C~~C~~~L~~~ 52 (72)
T 3f6q_B 11 SATCERCKGGFAP-----------AEKIVN-SNGELYHEQCF--------VCAQCFQQFPEG 52 (72)
T ss_dssp TCBCTTTCCBCCT-----------TCEEEE-ETTEEEETTTS--------SCTTTCCCCGGG
T ss_pred CccchhcCccccC-----------CceEEE-eCcCeeCcCCC--------cccCCCCCCCCC
Confidence 5689999888755 333322 34667888886 577787776544
No 328
>1loi_A Cyclic 3',5'-AMP specific phosphodiesterase RD1; hydrolase, C-AMP phosphodiesterase; NMR {Rattus norvegicus} SCOP: j.51.1.1
Probab=28.79 E-value=7.3 Score=20.36 Aligned_cols=12 Identities=33% Similarity=0.927 Sum_probs=9.7
Q ss_pred ccchhhHHHhhc
Q 042810 200 IFHASCISRWLE 211 (230)
Q Consensus 200 ~FH~~CI~~Wl~ 211 (230)
.||+.|-.+|+.
T Consensus 6 ffcetcskpwlv 17 (26)
T 1loi_A 6 FFCETCSKPWLV 17 (26)
T ss_dssp HHHHTSSCTTGG
T ss_pred HHHHhcCCchhh
Confidence 488899999874
No 329
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=28.76 E-value=24 Score=18.84 Aligned_cols=17 Identities=6% Similarity=0.053 Sum_probs=13.0
Q ss_pred CCCCccccc--cccceeee
Q 042810 16 SNNPLMCPV--GNIGIVLK 32 (230)
Q Consensus 16 ~~~~~~~~~--~~~~~~~~ 32 (230)
...||.|++ |.+.|...
T Consensus 5 ~~k~~~C~~~~C~k~f~~~ 23 (37)
T 1va1_A 5 KKKQHICHIQGCGKVYGKT 23 (37)
T ss_dssp SCCCEECCSTTCCCEESCH
T ss_pred CCCCCCCCCCCCCCccCCH
Confidence 457999985 99988643
No 330
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=27.95 E-value=22 Score=22.67 Aligned_cols=21 Identities=10% Similarity=0.248 Sum_probs=15.3
Q ss_pred CCCCccccccccceeeeeecc
Q 042810 16 SNNPLMCPVGNIGIVLKQRCQ 36 (230)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~ 36 (230)
...||.|++|...|......+
T Consensus 12 ~~k~~~C~~C~k~f~~~~~L~ 32 (77)
T 2ct1_A 12 GEKPYECYICHARFTQSGTMK 32 (77)
T ss_dssp CCCSEECTTTCCEESCHHHHH
T ss_pred CCCCeECCCcCchhCCHHHHH
Confidence 457899999988887654443
No 331
>2roo_A Neurotoxin MAGI-4; spider, sodium channel inhibitor, cleavage on PAIR of basic residues, ionic channel inhibitor, knottin, secreted; NMR {Synthetic}
Probab=27.31 E-value=7.2 Score=23.27 Aligned_cols=16 Identities=31% Similarity=0.889 Sum_probs=13.0
Q ss_pred hhhHHHhhccCCcccc
Q 042810 203 ASCISRWLEEQNSCPM 218 (230)
Q Consensus 203 ~~CI~~Wl~~~~tCP~ 218 (230)
.+||..|+.++.+|-.
T Consensus 18 mkCiyAWYnqq~sCq~ 33 (43)
T 2roo_A 18 YNCVYAWYNQQSSCER 33 (43)
T ss_dssp CEEEECGGGSSEEEEC
T ss_pred HHHHHHHHccCCchhh
Confidence 4799999999888753
No 332
>2cuq_A Four and A half LIM domains 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.25 E-value=22 Score=23.35 Aligned_cols=40 Identities=20% Similarity=0.473 Sum_probs=26.3
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCcccc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYE 226 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~ 226 (230)
...|+-|-+.+.. + .+..=+..||..|. +|-.|+..+..+
T Consensus 15 ~~~C~~C~~~I~~------------~--~v~a~~~~~H~~CF--------~C~~C~~~L~~~ 54 (80)
T 2cuq_A 15 APRCARCSKTLTQ------------G--GVTYRDQPWHRECL--------VCTGCQTPLAGQ 54 (80)
T ss_dssp SCCCTTTCCCCCS------------C--CEESSSSEECTTTC--------BCSSSCCBCTTC
T ss_pred CCcCCCCCCEecC------------c--EEEECCchhhhhhC--------CcccCCCcCCCC
Confidence 3578888887633 1 22345778888885 577887777543
No 333
>2cor_A Pinch protein; LIM domain, particularly interesting NEW Cys- His protein, LIM and senescent cell antigen-like domains 1, structural genomics; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.22 E-value=25 Score=23.30 Aligned_cols=40 Identities=13% Similarity=0.304 Sum_probs=26.2
Q ss_pred CCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCccc
Q 042810 164 AGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQY 225 (230)
Q Consensus 164 ~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~ 225 (230)
....|+-|-..+.. ..+..-+..||..|. +|-.|+..+..
T Consensus 14 ~~~~C~~C~~~I~~--------------~~v~a~~~~~H~~CF--------~C~~C~~~L~~ 53 (79)
T 2cor_A 14 GKYICQKCHAIIDE--------------QPLIFKNDPYHPDHF--------NCANCGKELTA 53 (79)
T ss_dssp CCCBCTTTCCBCCS--------------CCCCCSSSCCCTTTS--------BCSSSCCBCCT
T ss_pred CCCCCccCCCEecc--------------eEEEECcceeCCCCC--------EeCCCCCccCC
Confidence 35689999887642 112235677888775 57888777654
No 334
>1zfo_A LAsp-1; LIM domain, zinc-finger, metal-binding protein; NMR {Sus scrofa} SCOP: g.39.1.4
Probab=27.16 E-value=16 Score=20.08 Aligned_cols=29 Identities=21% Similarity=0.503 Sum_probs=18.9
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhH
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCI 206 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI 206 (230)
.+.|+.|-..+-. .+.+ .-=|..||..|.
T Consensus 3 ~~~C~~C~k~Vy~-----------~Ek~--~~~g~~~Hk~CF 31 (31)
T 1zfo_A 3 NPNCARCGKIVYP-----------TEKV--NCLDKFWHKACF 31 (31)
T ss_dssp CCBCSSSCSBCCG-----------GGCC--CSSSSCCCGGGC
T ss_pred CCcCCccCCEEec-----------ceeE--EECCeEecccCC
Confidence 3579999877655 2222 235778998883
No 335
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=26.73 E-value=30 Score=22.14 Aligned_cols=44 Identities=16% Similarity=0.357 Sum_probs=26.6
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCcccc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYE 226 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~ 226 (230)
...|+-|-+.+... ++...+..-+..||..|. +|-.|+..+..+
T Consensus 5 ~~~C~~C~~~I~~~----------~~~~~~~a~~~~wH~~CF--------~C~~C~~~L~~~ 48 (72)
T 1x4l_A 5 SSGCAGCTNPISGL----------GGTKYISFEERQWHNDCF--------NCKKCSLSLVGR 48 (72)
T ss_dssp SCSBTTTTBCCCCS----------SSCSCEECSSCEECTTTC--------BCSSSCCBCTTS
T ss_pred CCCCcCCCccccCC----------CCcceEEECCcccCcccC--------EeccCCCcCCCC
Confidence 45788888766420 011222236778888886 577887777543
No 336
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=26.36 E-value=20 Score=23.83 Aligned_cols=20 Identities=20% Similarity=0.601 Sum_probs=13.2
Q ss_pred HHhhccCCcccccccCcccc
Q 042810 207 SRWLEEQNSCPMCRRQIQYE 226 (230)
Q Consensus 207 ~~Wl~~~~tCP~CR~~i~~~ 226 (230)
++|+..--.||.|+.++..+
T Consensus 2 d~~LLeiL~CP~ck~~L~~~ 21 (69)
T 2pk7_A 2 DTKLLDILACPICKGPLKLS 21 (69)
T ss_dssp -CCGGGTCCCTTTCCCCEEC
T ss_pred ChHHHhheeCCCCCCcCeEe
Confidence 45565566799998877543
No 337
>1qdp_A Robustoxin; neurotoxin, cystine knot, inhibitor cystine knot motif, sodium channel modulator, funnel WEB spider, venom; NMR {Atrax robustus} SCOP: g.3.6.2 PDB: 1vtx_A
Probab=26.11 E-value=7.6 Score=23.06 Aligned_cols=15 Identities=40% Similarity=1.017 Sum_probs=12.6
Q ss_pred hhhHHHhhccCCccc
Q 042810 203 ASCISRWLEEQNSCP 217 (230)
Q Consensus 203 ~~CI~~Wl~~~~tCP 217 (230)
.+||..|+.++.+|-
T Consensus 18 mkCiyAWYnqq~sCq 32 (42)
T 1qdp_A 18 MKCIYAWYNQQGSCQ 32 (42)
T ss_dssp CEEECCSSCSCCEEE
T ss_pred HHHHHHHHccCCchH
Confidence 479999999988874
No 338
>1x6a_A LIMK-2, LIM domain kinase 2; LIM-kinase 2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.96 E-value=25 Score=23.12 Aligned_cols=39 Identities=21% Similarity=0.534 Sum_probs=24.7
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCccc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQY 225 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~ 225 (230)
...|+.|-+.+.. ..+..-+..||..|. +|-.|+..+..
T Consensus 15 ~~~C~~C~~~I~~--------------~~~~a~~~~~H~~CF--------~C~~C~~~L~~ 53 (81)
T 1x6a_A 15 GEFCHGCSLLMTG--------------PFMVAGEFKYHPECF--------ACMSCKVIIED 53 (81)
T ss_dssp SCBCTTTCCBCCS--------------CCBCCTTCCBCTTSC--------BCTTTCCBCCT
T ss_pred CCcCccCCCCcCc--------------eEEEECCceeccccC--------CccCCCCccCC
Confidence 3578888876632 112235677887775 57778777743
No 339
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=25.86 E-value=19 Score=23.86 Aligned_cols=21 Identities=24% Similarity=0.420 Sum_probs=14.8
Q ss_pred HHHhhccCCcccccccCcccc
Q 042810 206 ISRWLEEQNSCPMCRRQIQYE 226 (230)
Q Consensus 206 I~~Wl~~~~tCP~CR~~i~~~ 226 (230)
+++||..--.||+|+.++..+
T Consensus 3 md~~LLeiL~CP~ck~~L~~~ 23 (67)
T 2jny_A 3 LDPQLLEVLACPKDKGPLRYL 23 (67)
T ss_dssp SCGGGTCCCBCTTTCCBCEEE
T ss_pred CCHHHHHHhCCCCCCCcCeEe
Confidence 356666666899999877543
No 340
>2l3k_A Rhombotin-2, linker, LIM domain-binding protein 1; LMO2(LIM2)-LDB1(LID), chimera, fusion protein, oncoprotein; NMR {Mus musculus} PDB: 2l6y_B 2l6z_C
Probab=25.19 E-value=26 Score=25.35 Aligned_cols=10 Identities=30% Similarity=0.647 Sum_probs=6.4
Q ss_pred ccccCchhhh
Q 042810 167 NCAVCLEELI 176 (230)
Q Consensus 167 ~C~ICle~~~ 176 (230)
.|+-|-..+.
T Consensus 10 ~C~~C~~~I~ 19 (123)
T 2l3k_A 10 LCASCDKRIR 19 (123)
T ss_dssp CCSSSSCCCC
T ss_pred cccCCCCeec
Confidence 5777766554
No 341
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=24.99 E-value=24 Score=20.28 Aligned_cols=18 Identities=6% Similarity=0.054 Sum_probs=13.8
Q ss_pred CCCCcccc--ccccceeeee
Q 042810 16 SNNPLMCP--VGNIGIVLKQ 33 (230)
Q Consensus 16 ~~~~~~~~--~~~~~~~~~~ 33 (230)
...||.|+ .|.+.|...-
T Consensus 15 ~~k~~~C~~~~C~k~F~~~~ 34 (47)
T 1ncs_A 15 PDKTFECLFPGCTKTFKRRY 34 (47)
T ss_dssp TTTEEECCCTTCCCEECSSS
T ss_pred CCCCeECCCCCCCCccCCHH
Confidence 46899995 7999987543
No 342
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=24.87 E-value=17 Score=31.35 Aligned_cols=52 Identities=21% Similarity=0.418 Sum_probs=30.9
Q ss_pred cCCCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccC
Q 042810 163 KAGDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQ 222 (230)
Q Consensus 163 ~~~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~ 222 (230)
.....|++|-..-..+- +. .+.+.+..+ +.+|.-|-..|--.+-.||.|-..
T Consensus 180 ~~~~~CPvCGs~P~~s~-l~--~~g~~~G~R-----~l~Cs~C~t~W~~~R~~C~~Cg~~ 231 (309)
T 2fiy_A 180 ESRTLCPACGSPPMAGM-IR--QGGKETGLR-----YLSCSLCACEWHYVRIKCSHCEES 231 (309)
T ss_dssp TTCSSCTTTCCCEEEEE-EE--C----CCEE-----EEEETTTCCEEECCTTSCSSSCCC
T ss_pred ccCCCCCCCCCcCceeE-Ee--ecCCCCCcE-----EEEeCCCCCEEeecCcCCcCCCCC
Confidence 45789999987643310 00 000011122 346677888998778899999764
No 343
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=24.81 E-value=25 Score=26.91 Aligned_cols=28 Identities=18% Similarity=0.581 Sum_probs=18.7
Q ss_pred eeEEeCCCCccchhhHHHhhccCCcccccccCcc
Q 042810 191 QLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQ 224 (230)
Q Consensus 191 ~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~ 224 (230)
..+...|||.|-.. .....||.|..++.
T Consensus 132 ~y~C~~Cg~~~~~~------~~~~~Cp~CG~~~~ 159 (165)
T 2lcq_A 132 RYVCIGCGRKFSTL------PPGGVCPDCGSKVK 159 (165)
T ss_dssp CEEESSSCCEESSC------CGGGBCTTTCCBEE
T ss_pred EEECCCCCCcccCC------CCCCcCCCCCCcce
Confidence 34555699988643 22448999987754
No 344
>1x3h_A Leupaxin; paxillin family, protein-protein interaction, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.42 E-value=22 Score=23.36 Aligned_cols=41 Identities=17% Similarity=0.505 Sum_probs=25.9
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCccccC
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYED 227 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~~ 227 (230)
...|+-|-..+.+ +.+ ..=+..||..|. +|-.|+..+....
T Consensus 15 ~~~C~~C~~~I~~------------~~v--~a~~~~~H~~CF--------~C~~C~~~L~~~~ 55 (80)
T 1x3h_A 15 SPKCGGCNRPVLE------------NYL--SAMDTVWHPECF--------VCGDCFTSFSTGS 55 (80)
T ss_dssp SCBCTTTCCBCCS------------SCE--EETTEEECTTTC--------BCSSSCCBSCSSC
T ss_pred CCccccCCCeecc------------eeE--EECCCeEecCcC--------ChhhCCCCCCCCc
Confidence 3578888877633 122 224667888775 5888888776543
No 345
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=24.41 E-value=30 Score=21.14 Aligned_cols=8 Identities=38% Similarity=1.227 Sum_probs=6.6
Q ss_pred cccccccC
Q 042810 215 SCPMCRRQ 222 (230)
Q Consensus 215 tCP~CR~~ 222 (230)
.||+|...
T Consensus 32 ~CP~Cg~~ 39 (46)
T 6rxn_A 32 CCPVCGVS 39 (46)
T ss_dssp BCTTTCCB
T ss_pred cCcCCCCc
Confidence 89999863
No 346
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=24.25 E-value=36 Score=22.05 Aligned_cols=45 Identities=16% Similarity=0.394 Sum_probs=27.8
Q ss_pred CCccccCchhhhhhhhhhccccccC-ceeEEeCCCCccchhhHHHhhccCCcccccccCccccC
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKK-TQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQYED 227 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~-~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~~ 227 (230)
...|+-|-..+... + ....+..=+..||..|. +|-.|+..+..+.
T Consensus 15 ~~~C~~C~~~I~~~----------g~~~~~~~a~~~~~H~~CF--------~C~~C~~~L~~~~ 60 (77)
T 2egq_A 15 AKKCAGCKNPITGF----------GKGSSVVAYEGQSWHDYCF--------HCKKCSVNLANKR 60 (77)
T ss_dssp CCCCSSSCCCCCCC----------SSCCCEEEETTEEEETTTC--------BCSSSCCBCTTSC
T ss_pred CccCcccCCcccCC----------CCCceeEEECcceeCcccC--------EehhcCCCCCCCc
Confidence 46799998876420 1 11222234677888885 5888888876543
No 347
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=23.83 E-value=13 Score=23.68 Aligned_cols=19 Identities=26% Similarity=0.494 Sum_probs=12.8
Q ss_pred HHhhccCCcccccccCccc
Q 042810 207 SRWLEEQNSCPMCRRQIQY 225 (230)
Q Consensus 207 ~~Wl~~~~tCP~CR~~i~~ 225 (230)
++|+..--.||.|+.++..
T Consensus 4 d~~lL~iL~CP~c~~~L~~ 22 (56)
T 2kpi_A 4 EAGLLEILACPACHAPLEE 22 (56)
T ss_dssp CCSCTTSCCCSSSCSCEEE
T ss_pred CHHHHhheeCCCCCCccee
Confidence 4555555579999887654
No 348
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=23.71 E-value=29 Score=22.02 Aligned_cols=16 Identities=13% Similarity=0.393 Sum_probs=11.7
Q ss_pred CCCccccccccceeee
Q 042810 17 NNPLMCPVGNIGIVLK 32 (230)
Q Consensus 17 ~~~~~~~~~~~~~~~~ 32 (230)
..||.|++|...|...
T Consensus 44 ~~~~~C~~C~~~f~~~ 59 (77)
T 2cot_A 44 EKPYKCDECGKAFIQR 59 (77)
T ss_dssp SCSEECSSSCCEESSH
T ss_pred CcCeeCCCCCCccCCH
Confidence 4678888888877654
No 349
>2dlo_A Thyroid receptor-interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.23 E-value=22 Score=23.49 Aligned_cols=39 Identities=23% Similarity=0.685 Sum_probs=24.7
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCccc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQY 225 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~ 225 (230)
...|+-|-..+.+ . .+..-+..||..|. +|..|+..+..
T Consensus 15 ~~~C~~C~~~I~~------------~--~~~a~~~~~H~~CF--------~C~~C~~~L~~ 53 (81)
T 2dlo_A 15 LEKCATCSQPILD------------R--ILRAMGKAYHPGCF--------TCVVCHRGLDG 53 (81)
T ss_dssp CCBCTTTCCBCCS------------C--CEEETTEEECTTTC--------BCSSSCCBCTT
T ss_pred CCccccCCCeecc------------e--eEEECCccccHHhc--------CcccCCCccCC
Confidence 5678888776632 1 22235677887775 57888777653
No 350
>2xjy_A Rhombotin-2; oncoprotein, T-cell leukemia, proto-oncogene, transcription, developmental protein; 2.40A {Homo sapiens} PDB: 2xjz_A
Probab=23.16 E-value=39 Score=24.39 Aligned_cols=28 Identities=14% Similarity=0.313 Sum_probs=15.4
Q ss_pred CCccchhhHHHhhccCCcccccccCccc
Q 042810 198 HHIFHASCISRWLEEQNSCPMCRRQIQY 225 (230)
Q Consensus 198 ~H~FH~~CI~~Wl~~~~tCP~CR~~i~~ 225 (230)
+..||..|..+-+..+..|..|...|..
T Consensus 51 g~~yC~~~y~~~~~~~~~C~~C~~~I~~ 78 (131)
T 2xjy_A 51 GRKLCRRDYLRLFGQDGLCASCDKRIRA 78 (131)
T ss_dssp TEEECHHHHHHHHCCCEECTTTCCEECT
T ss_pred CEEeecCchhhhCCCccChhhcCCccCc
Confidence 4446666665544433356666666654
No 351
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=22.77 E-value=13 Score=25.51 Aligned_cols=28 Identities=36% Similarity=0.804 Sum_probs=19.4
Q ss_pred eEEeC-CCCccchhhHHHhhccC--Cccccc
Q 042810 192 LITMP-CHHIFHASCISRWLEEQ--NSCPMC 219 (230)
Q Consensus 192 v~~Lp-C~H~FH~~CI~~Wl~~~--~tCP~C 219 (230)
.+.-| |++.||..|-.+|=++| .+|..-
T Consensus 43 ~v~C~~C~~~FC~~C~~~w~~~H~~~sC~~~ 73 (86)
T 2ct7_A 43 EATCPQCHQTFCVRCKRQWEEQHRGRSCEDF 73 (86)
T ss_dssp CEECTTTCCEECSSSCSBCCTTTTTSCHHHH
T ss_pred ceEeCCCCCccccccCCchhhcCCCCChHHH
Confidence 34556 99999999999993322 356543
No 352
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=22.37 E-value=35 Score=18.07 Aligned_cols=17 Identities=12% Similarity=0.372 Sum_probs=13.1
Q ss_pred CCCCcccc--ccccceeee
Q 042810 16 SNNPLMCP--VGNIGIVLK 32 (230)
Q Consensus 16 ~~~~~~~~--~~~~~~~~~ 32 (230)
...||.|+ .|...|...
T Consensus 3 ~~k~~~C~~~~C~k~f~~~ 21 (38)
T 1bhi_A 3 DDKPFLCTAPGCGQRFTNE 21 (38)
T ss_dssp TCCCEECCCTTTCCEESSH
T ss_pred CCcceECCCCCCCcccCCH
Confidence 35799999 499888654
No 353
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=22.12 E-value=28 Score=27.96 Aligned_cols=20 Identities=30% Similarity=0.584 Sum_probs=13.8
Q ss_pred CCCCccchhhHHHhhccCCcccccccC
Q 042810 196 PCHHIFHASCISRWLEEQNSCPMCRRQ 222 (230)
Q Consensus 196 pC~H~FH~~CI~~Wl~~~~tCP~CR~~ 222 (230)
-|||++- . ..+| .||+|..+
T Consensus 176 ~CG~i~~-g-~~p~-----~CP~C~~~ 195 (202)
T 1yuz_A 176 ICGYIHK-G-EDFE-----KCPICFRP 195 (202)
T ss_dssp SSCCEEE-S-SCCS-----BCTTTCCB
T ss_pred CCCCEEc-C-cCCC-----CCCCCCCC
Confidence 3999854 3 4444 89999764
No 354
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Probab=21.70 E-value=54 Score=22.34 Aligned_cols=27 Identities=22% Similarity=0.481 Sum_probs=16.9
Q ss_pred CCccchhhHHHhhccCCcccccccCcccc
Q 042810 198 HHIFHASCISRWLEEQNSCPMCRRQIQYE 226 (230)
Q Consensus 198 ~H~FH~~CI~~Wl~~~~tCP~CR~~i~~~ 226 (230)
+..||..|..+- ....|..|...|...
T Consensus 53 g~~yC~~cy~~~--~~~~C~~C~~~I~~~ 79 (101)
T 2cup_A 53 NKILCNKCTTRE--DSPKCKGCFKAIVAG 79 (101)
T ss_dssp TEEECHHHHTTC--CCCBCSSSCCBCCSS
T ss_pred CEEEChhHhhhh--cCCccccCCCccccC
Confidence 445666665432 245788898888743
No 355
>1rut_X Flinc4, fusion protein of LMO4 protein and LIM domain- binding protein 1; B-tandem zipper, protein binding; 1.30A {Mus musculus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 2dfy_X 2xjz_I 2xjy_B
Probab=21.44 E-value=38 Score=26.39 Aligned_cols=28 Identities=18% Similarity=0.351 Sum_probs=15.3
Q ss_pred CCccchhhHHHhhccCCcccccccCccc
Q 042810 198 HHIFHASCISRWLEEQNSCPMCRRQIQY 225 (230)
Q Consensus 198 ~H~FH~~CI~~Wl~~~~tCP~CR~~i~~ 225 (230)
+..||..|..+-+..+..|+.|...|..
T Consensus 54 g~~yC~~cy~~~~~~~~~C~~C~~~I~~ 81 (188)
T 1rut_X 54 GMILCRNDYIRLFGNSGACSACGQSIPA 81 (188)
T ss_dssp TEEECHHHHHHHHSCCEECTTTCCEECT
T ss_pred CccccccccccccccCCccccCCCcccc
Confidence 4456666665544333356666666643
No 356
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.94 E-value=45 Score=21.63 Aligned_cols=43 Identities=14% Similarity=0.404 Sum_probs=25.3
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhccCCcccccccCccc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLEEQNSCPMCRRQIQY 225 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~~~~tCP~CR~~i~~ 225 (230)
...|+.|-..+.... ..+.+ ..-+..||..|. +|-.|+..+..
T Consensus 5 ~~~C~~C~~~I~~~g--------~~~~~--~a~~~~wH~~CF--------~C~~C~~~L~~ 47 (76)
T 1x68_A 5 SSGCVACSKPISGLT--------GAKFI--CFQDSQWHSECF--------NCGKCSVSLVG 47 (76)
T ss_dssp CCCCTTTCCCCCTTT--------TCCEE--EETTEEEEGGGC--------BCTTTCCBCSS
T ss_pred CCCCccCCCcccCCC--------CceeE--EECCcccCcccC--------ChhhCCCcCCC
Confidence 457888888764200 01222 235677888886 57777776653
No 357
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=20.65 E-value=26 Score=32.12 Aligned_cols=47 Identities=21% Similarity=0.413 Sum_probs=27.8
Q ss_pred CCccccCchhhhhhhhhhccccccCceeEEeCCCCccchhhHHHhhc-----cCCccccccc
Q 042810 165 GDNCAVCLEELIAKEEIKGQTTEKKTQLITMPCHHIFHASCISRWLE-----EQNSCPMCRR 221 (230)
Q Consensus 165 ~~~C~ICle~~~~~~~~~~~~~~~~~~v~~LpC~H~FH~~CI~~Wl~-----~~~tCP~CR~ 221 (230)
+..-+||...+.. .+..+..--|.-.||..|+.---. .+-.||.|+.
T Consensus 36 ~~~yC~C~~~~d~----------~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~ 87 (488)
T 3kv5_D 36 PPVYCVCRQPYDV----------NRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAV 87 (488)
T ss_dssp CCEETTTTEECCT----------TSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHH
T ss_pred CCeEEeCCCcCCC----------CCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcC
Confidence 3344488776532 133343334999999999943211 1236999975
No 358
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=20.61 E-value=39 Score=22.78 Aligned_cols=24 Identities=17% Similarity=0.196 Sum_probs=17.0
Q ss_pred eeccCCCCccccc--cccceeeeeec
Q 042810 12 TGSCSNNPLMCPV--GNIGIVLKQRC 35 (230)
Q Consensus 12 ~~~~~~~~~~~~~--~~~~~~~~~~~ 35 (230)
+.-....||.|+. |.+.|...-..
T Consensus 20 ~~~sGEKPYkC~~~~CgKaFsr~s~L 45 (73)
T 1x3c_A 20 TRYSPYRPYRCVHQGCFAAFTIQQNL 45 (73)
T ss_dssp SSSCSSCSCBCCSTTCCCBCSSHHHH
T ss_pred ccccCCCCeECCCCCcChhHcCHHHH
Confidence 3445678999965 99999655443
Done!