BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>042815
MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGV
TLMGIQPQNLWYYIDGQIDAWQAACQI

High Scoring Gene Products

Symbol, full name Information P value
AT2G42920 protein from Arabidopsis thaliana 6.9e-05
SLO2
AT2G13600
protein from Arabidopsis thaliana 0.00015
AT1G31430 protein from Arabidopsis thaliana 0.00019
AT2G01510 protein from Arabidopsis thaliana 0.00020
REME1
required for efficiency of mitochondrial editing 1
protein from Arabidopsis thaliana 0.00022
AT1G77170 protein from Arabidopsis thaliana 0.00024
AT3G22150 protein from Arabidopsis thaliana 0.00038

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  042815
        (87 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2045580 - symbol:AT2G42920 species:3702 "Arabi...   105  6.9e-05   1
TAIR|locus:2054131 - symbol:SLO2 "AT2G13600" species:3702...   103  0.00015   1
TAIR|locus:2206164 - symbol:AT1G31430 species:3702 "Arabi...   101  0.00019   1
TAIR|locus:2049562 - symbol:AT2G01510 "AT2G01510" species...   101  0.00020   1
TAIR|locus:2056794 - symbol:REME1 "required for efficienc...   101  0.00022   1
TAIR|locus:2195980 - symbol:AT1G77170 "AT1G77170" species...    99  0.00024   1
TAIR|locus:2090444 - symbol:AT3G22150 "AT3G22150" species...   100  0.00038   1


>TAIR|locus:2045580 [details] [associations]
            symbol:AT2G42920 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR011990
            InterPro:IPR002885 GO:GO:0009507 EMBL:CP002685
            GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
            EMBL:AC006580 EMBL:AC006931 Pfam:PF01535 Pfam:PF13812
            TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569 EMBL:AK229283
            IPI:IPI00518122 PIR:H84859 RefSeq:NP_181820.1 UniGene:At.73075
            ProteinModelPortal:Q9SJG6 SMR:Q9SJG6 PaxDb:Q9SJG6 PRIDE:Q9SJG6
            EnsemblPlants:AT2G42920.1 GeneID:818893 KEGG:ath:AT2G42920
            GeneFarm:3678 TAIR:At2g42920 eggNOG:NOG237883 InParanoid:Q9SJG6
            OMA:NYAYLVF PhylomeDB:Q9SJG6 ProtClustDB:CLSN2683945
            Genevestigator:Q9SJG6 Uniprot:Q9SJG6
        Length = 559

 Score = 105 (42.0 bits), Expect = 6.9e-05, P = 6.9e-05
 Identities = 20/49 (40%), Positives = 33/49 (67%)

Query:     3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
             P +  +  ++M+LGLA NG     ++LF  +E+ G  P++V+F+GVLTA
Sbjct:   320 PKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTA 368


>TAIR|locus:2054131 [details] [associations]
            symbol:SLO2 "AT2G13600" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM;IDA] [GO:0010182 "sugar mediated
            signaling pathway" evidence=IMP] [GO:0080156 "mitochondrial mRNA
            modification" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
            GO:GO:0005739 EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC007063
            GO:GO:0010182 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
            TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570 GO:GO:0080156
            IPI:IPI00529256 PIR:H84508 RefSeq:NP_178983.1 UniGene:At.52726
            ProteinModelPortal:Q9SIT7 SMR:Q9SIT7 EnsemblPlants:AT2G13600.1
            GeneID:815845 KEGG:ath:AT2G13600 GeneFarm:3687 TAIR:At2g13600
            eggNOG:NOG311224 InParanoid:Q9SIT7 OMA:GFAQHDR PhylomeDB:Q9SIT7
            ProtClustDB:CLSN2683340 Genevestigator:Q9SIT7 Uniprot:Q9SIT7
        Length = 697

 Score = 103 (41.3 bits), Expect = 0.00015, P = 0.00015
 Identities = 20/52 (38%), Positives = 33/52 (63%)

Query:     2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
             M  RD  + +AM++G A+NG     +ELF  + + G +P+ +T +GVL+A G
Sbjct:   453 MMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACG 504


>TAIR|locus:2206164 [details] [associations]
            symbol:AT1G31430 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
            InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
            Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812
            TIGRFAMs:TIGR00756 EMBL:AC027135 Pfam:PF12854 Pfam:PF13041
            HOGENOM:HOG000237569 IPI:IPI00518213 PIR:C86440 RefSeq:NP_174428.1
            UniGene:At.40342 UniGene:At.5353 ProteinModelPortal:Q9C866
            SMR:Q9C866 PaxDb:Q9C866 EnsemblPlants:AT1G31430.1 GeneID:840033
            KEGG:ath:AT1G31430 GeneFarm:3605 TAIR:At1g31430 eggNOG:NOG280522
            InParanoid:Q9C866 OMA:NGYVQFN PhylomeDB:Q9C866
            ProtClustDB:CLSN2682384 Genevestigator:Q9C866 Uniprot:Q9C866
        Length = 570

 Score = 101 (40.6 bits), Expect = 0.00019, P = 0.00019
 Identities = 20/47 (42%), Positives = 32/47 (68%)

Query:     5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
             RD  + ++++ GLA NG +G  ++L+  +E  G R +A+TFV VLTA
Sbjct:   343 RDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTA 389


>TAIR|locus:2049562 [details] [associations]
            symbol:AT2G01510 "AT2G01510" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR002885 GO:GO:0005739 EMBL:CP002685
            GenomeReviews:CT485783_GR PROSITE:PS51375 EMBL:AC005560
            Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 HOGENOM:HOG000237569
            IPI:IPI00535832 PIR:F84425 RefSeq:NP_178260.1 UniGene:At.66150
            ProteinModelPortal:Q9ZVF4 SMR:Q9ZVF4 PaxDb:Q9ZVF4 PRIDE:Q9ZVF4
            EnsemblPlants:AT2G01510.1 GeneID:814680 KEGG:ath:AT2G01510
            GeneFarm:3359 TAIR:At2g01510 eggNOG:NOG303667 InParanoid:Q9ZVF4
            OMA:AYSSVEF PhylomeDB:Q9ZVF4 ProtClustDB:CLSN2683536
            Genevestigator:Q9ZVF4 Uniprot:Q9ZVF4
        Length = 584

 Score = 101 (40.6 bits), Expect = 0.00020, P = 0.00020
 Identities = 21/50 (42%), Positives = 32/50 (64%)

Query:     2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
             M  R+  + S M++G A NG +   + LF +++  G RPN VTF+GVL+A
Sbjct:   271 MKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSA 320


>TAIR|locus:2056794 [details] [associations]
            symbol:REME1 "required for efficiency of mitochondrial
            editing 1" species:3702 "Arabidopsis thaliana" [GO:0005739
            "mitochondrion" evidence=ISM;IDA] [GO:0009451 "RNA modification"
            evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
            EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:1.25.40.10
            PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
            GO:GO:0009451 Pfam:PF12854 Pfam:PF13041 HOGENOM:HOG000237570
            EMBL:AC007196 EMBL:BT003840 IPI:IPI00519155 PIR:C84453
            RefSeq:NP_178481.1 UniGene:At.41363 ProteinModelPortal:Q9SI53
            SMR:Q9SI53 PRIDE:Q9SI53 EnsemblPlants:AT2G03880.1 GeneID:814914
            KEGG:ath:AT2G03880 GeneFarm:3431 TAIR:At2g03880 eggNOG:NOG254665
            InParanoid:Q9SI53 OMA:FRSMKKL PhylomeDB:Q9SI53
            ProtClustDB:CLSN2683857 Genevestigator:Q9SI53 Uniprot:Q9SI53
        Length = 630

 Score = 101 (40.6 bits), Expect = 0.00022, P = 0.00022
 Identities = 22/50 (44%), Positives = 31/50 (62%)

Query:     2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
             M  RD  T S M+ GLA+NG +   ++LF  ++  G +PN +T VGVL A
Sbjct:   319 MKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFA 368


>TAIR|locus:2195980 [details] [associations]
            symbol:AT1G77170 "AT1G77170" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
            GenomeReviews:CT485782_GR EMBL:AC004260 Gene3D:1.25.40.10
            PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
            HOGENOM:HOG000237569 IPI:IPI00518933 RefSeq:NP_177842.1
            UniGene:At.21362 ProteinModelPortal:Q3ECB8 PaxDb:Q3ECB8
            EnsemblPlants:AT1G77170.1 GeneID:844054 KEGG:ath:AT1G77170
            GeneFarm:3631 TAIR:At1g77170 eggNOG:NOG311468 InParanoid:Q3ECB8
            OMA:LEPWNDG PhylomeDB:Q3ECB8 ProtClustDB:CLSN2682973
            Genevestigator:Q3ECB8 Uniprot:Q3ECB8
        Length = 467

 Score = 99 (39.9 bits), Expect = 0.00024, P = 0.00024
 Identities = 21/50 (42%), Positives = 31/50 (62%)

Query:     2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
             M  R+  + S+M++G A NG     +E F  + + G RPN +TFVGVL+A
Sbjct:   281 MRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSA 330


>TAIR|locus:2090444 [details] [associations]
            symbol:AT3G22150 "AT3G22150" species:3702 "Arabidopsis
            thaliana" [GO:0016556 "mRNA modification" evidence=RCA]
            InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507 EMBL:CP002686
            GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
            Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AP001306 Pfam:PF13041
            EMBL:AK229803 IPI:IPI00524640 RefSeq:NP_188854.1 UniGene:At.37924
            ProteinModelPortal:Q9LIE7 SMR:Q9LIE7 EnsemblPlants:AT3G22150.1
            GeneID:821779 KEGG:ath:AT3G22150 GeneFarm:3869 TAIR:At3g22150
            eggNOG:NOG291997 HOGENOM:HOG000241004 InParanoid:Q9LIE7 OMA:EVWNTMI
            PhylomeDB:Q9LIE7 ProtClustDB:CLSN2685299 Genevestigator:Q9LIE7
            Uniprot:Q9LIE7
        Length = 820

 Score = 100 (40.3 bits), Expect = 0.00038, P = 0.00038
 Identities = 18/47 (38%), Positives = 33/47 (70%)

Query:     5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
             R++ T + M+LG  ++G     + LF+S+++ G +P+A+TFV VL+A
Sbjct:   585 RNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSA 631


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.137   0.425    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       87        87   0.00091  102 3  11 22  0.44    29
                                                     29  0.48    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  534 (57 KB)
  Total size of DFA:  110 KB (2074 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.97u 0.19s 9.16t   Elapsed:  00:00:00
  Total cpu time:  8.97u 0.19s 9.16t   Elapsed:  00:00:00
  Start:  Tue May 21 03:23:00 2013   End:  Tue May 21 03:23:00 2013

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