BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042815
(87 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357519199|ref|XP_003629888.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355523910|gb|AET04364.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 515
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 38/69 (55%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP +D T SAM+LGLA NG N M +ELF +EK GP+PN VTFVGVLTA +FG +
Sbjct: 283 MPVKDVATWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGES 342
Query: 62 --LMGIQPQ 68
L GI +
Sbjct: 343 ARLFGIMSE 351
>gi|296088887|emb|CBI38431.3| unnamed protein product [Vitis vinifera]
Length = 575
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGV 48
MP +D T S+M+LGLA NG N MG+ELF +E RGPRPNA+TF+GV
Sbjct: 422 MPLKDVTAWSSMILGLAINGNNEMGLELFHEMETRGPRPNAITFIGV 468
>gi|357466867|ref|XP_003603718.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355492766|gb|AES73969.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 629
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M +D T SAM+LGLA NG N M +ELF +EK GP+PN VTFVGVLTA +FG +
Sbjct: 319 MLVKDVATWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGES 378
Query: 62 --LMGIQPQ 68
L GI +
Sbjct: 379 SRLFGIMSE 387
>gi|356544269|ref|XP_003540576.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 522
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/61 (55%), Positives = 40/61 (65%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M +D SAM+LGLA N KN +ELF +EK GPRPNAVTF+GVLTA +FG
Sbjct: 292 MKTKDVAAWSAMVLGLAINAKNQEALELFEEMEKVGPRPNAVTFIGVLTACNHKDLFGEA 351
Query: 62 L 62
L
Sbjct: 352 L 352
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIF 58
R+ + SAM+ G KNG G++LF ++ R +PN VL+A + F
Sbjct: 192 RNDVSYSAMVSGYVKNGCFREGIQLFRELKDRNVKPNNSLLASVLSACASVGAF 245
>gi|296085643|emb|CBI29442.3| unnamed protein product [Vitis vinifera]
Length = 848
Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/46 (63%), Positives = 36/46 (78%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVG 47
MP +D T S+M+LGLA NG N MG+ELF +E RGPRPNA+TF+G
Sbjct: 386 MPLKDVTAWSSMILGLAINGNNEMGLELFHEMETRGPRPNAITFIG 431
>gi|255580411|ref|XP_002531032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529385|gb|EEF31349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 392
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/50 (60%), Positives = 39/50 (78%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D TT SAM+LGLA NG+N G+ LF +E++GP+ NAVTF+GVLTA
Sbjct: 285 MQYKDVTTWSAMILGLAINGENHRGIGLFAEMERKGPKANAVTFMGVLTA 334
>gi|356498888|ref|XP_003518279.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Glycine max]
Length = 552
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
M RD T SAM+ A++GK+ ++LF+ ++K G +PN VTF+GVL A G
Sbjct: 368 MRYRDVYTYSAMIAAFAEHGKSQDAIDLFLKMQKEGLKPNQVTFIGVLNACG 419
>gi|125555946|gb|EAZ01552.1| hypothetical protein OsI_23585 [Oryza sativa Indica Group]
Length = 530
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RDAT +A++ GLA NG+ G +ELF +++ +P+ VTF+GVL+A
Sbjct: 342 MQGRDATAWTAIICGLATNGQAGRALELFQDMQRSKVKPDGVTFIGVLSA 391
>gi|115468780|ref|NP_001057989.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|50725579|dbj|BAD33047.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113596029|dbj|BAF19903.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|125597760|gb|EAZ37540.1| hypothetical protein OsJ_21869 [Oryza sativa Japonica Group]
Length = 530
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RDAT +A++ GLA NG+ G +ELF +++ +P+ VTF+GVL+A
Sbjct: 342 MQGRDATAWTAIICGLATNGQAGRALELFQDMQRSKVKPDGVTFIGVLSA 391
>gi|218198170|gb|EEC80597.1| hypothetical protein OsI_22944 [Oryza sativa Indica Group]
Length = 563
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 9/72 (12%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP RD + S M+ GLA+NG++ +++F ++ GPRPN +T VGVL F +
Sbjct: 286 MPQRDVISWSTMISGLAQNGRSIEALKVFDMMKSEGPRPNHITMVGVL--------FACS 337
Query: 62 LMGIQPQNLWYY 73
G+ ++ WYY
Sbjct: 338 HAGLV-EDGWYY 348
>gi|215713517|dbj|BAG94654.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635568|gb|EEE65700.1| hypothetical protein OsJ_21333 [Oryza sativa Japonica Group]
Length = 382
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 9/72 (12%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP RD + S M+ GLA+NG++ +++F ++ GPRPN +T VGVL F +
Sbjct: 71 MPQRDVISWSTMISGLAQNGRSIEALKVFDMMKSEGPRPNHITMVGVL--------FACS 122
Query: 62 LMGIQPQNLWYY 73
G+ ++ WYY
Sbjct: 123 HAGLV-EDGWYY 133
>gi|115468046|ref|NP_001057622.1| Os06g0472300 [Oryza sativa Japonica Group]
gi|113595662|dbj|BAF19536.1| Os06g0472300, partial [Oryza sativa Japonica Group]
Length = 397
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 9/72 (12%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP RD + S M+ GLA+NG++ +++F ++ GPRPN +T VGVL F +
Sbjct: 86 MPQRDVISWSTMISGLAQNGRSIEALKVFDMMKSEGPRPNHITMVGVL--------FACS 137
Query: 62 LMGIQPQNLWYY 73
G+ ++ WYY
Sbjct: 138 HAGLV-EDGWYY 148
>gi|242087927|ref|XP_002439796.1| hypothetical protein SORBIDRAFT_09g020210 [Sorghum bicolor]
gi|241945081|gb|EES18226.1| hypothetical protein SORBIDRAFT_09g020210 [Sorghum bicolor]
Length = 399
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 12/77 (15%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLT----------A 51
MP RD + SA++LG NG + + + F +E G RPN+VTF+G L+ A
Sbjct: 206 MPRRDVISWSALILGHGLNGHSDVALRFFDRMEAEGIRPNSVTFLGALSACAHSGMVDKA 265
Query: 52 YGKIKIFGVTLMGIQPQ 68
Y +K G+ L GI+P+
Sbjct: 266 YAILK--GMKLWGIEPE 280
>gi|357445603|ref|XP_003593079.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360447|gb|ABN08457.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355482127|gb|AES63330.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 558
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+M RD T SAM+ A++GK+ ++LF+ +++ G +PN VTFVGVL A
Sbjct: 370 IMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLKPNQVTFVGVLNA 420
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA--YGKIKIFG 59
M RD T + M+ GL+ NGK+ +ELF + R RP VTFVGVL A +G + FG
Sbjct: 339 MKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFG 398
Query: 60 VTLM-------GIQPQ 68
+ G++PQ
Sbjct: 399 FKIFHSMTRDYGVEPQ 414
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA--YGKIKIFG 59
M RD T + M+ GL+ NGK+ +ELF + R RP VTFVGVL A +G + FG
Sbjct: 296 MKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFG 355
Query: 60 VTLM-------GIQPQ 68
+ G++PQ
Sbjct: 356 FKIFHSMTRDYGVEPQ 371
>gi|326518042|dbj|BAK07273.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 527
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD +A++ GLA NG+ G +ELF +E+ +P++VTF+GVL+A
Sbjct: 339 MEGRDTKAWTAIICGLATNGQAGRALELFEDMERSEAKPDSVTFIGVLSA 388
>gi|357123975|ref|XP_003563682.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Brachypodium distachyon]
Length = 527
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T ++++ GLA NG+ G +ELF +E+ +P+++TF+GVL+A
Sbjct: 339 MQGRDTTAWTSIICGLATNGQAGRALELFEDMERSKVKPDSITFIGVLSA 388
>gi|357116863|ref|XP_003560196.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 528
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD T ++M+ GLA +G+ + L + + G RPNAVTF+GVL+A
Sbjct: 317 MPRRDVYTYTSMISGLAMHGRGQEALALLADMRRAGVRPNAVTFLGVLSA 366
>gi|242063604|ref|XP_002453091.1| hypothetical protein SORBIDRAFT_04g038305 [Sorghum bicolor]
gi|241932922|gb|EES06067.1| hypothetical protein SORBIDRAFT_04g038305 [Sorghum bicolor]
Length = 514
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFG 59
RD +AM+ GL+ +G+ G ++LF ++ G RPN VTF+ VLTA G+ + G
Sbjct: 295 RDVFAYTAMISGLSDHGRCGEAIDLFGQMQAEGVRPNEVTFICVLTACGRAGLVG 349
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 25/54 (46%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP R+ SAM+ G V LF + + G RPN VGVL A G +
Sbjct: 182 MPRRNDVAWSAMLSAYVAAGSFDDAVRLFEDMLRSGVRPNRAAVVGVLAACGAL 235
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MM +D + S M+ GLA+NG + ++LF +++ +GP+PN +T +GVL A
Sbjct: 274 MMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFA 324
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + +AM+ GL++NG+ G+ELF + G +P+ VTFV +L+A
Sbjct: 482 MPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSA 531
>gi|357480561|ref|XP_003610566.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511621|gb|AES92763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 598
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+M RD T SAM+ A++GK+ ++LF+ +++ G PN VTFVGVL A
Sbjct: 370 IMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLTPNQVTFVGVLNA 420
>gi|296089760|emb|CBI39579.3| unnamed protein product [Vitis vinifera]
Length = 459
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLT 50
MP ++ + +AM+ GL NGK +G +LF + +G RPN TFVGVL+
Sbjct: 275 MPQKNVVSWNAMISGLTFNGKGELGADLFEEMINKGVRPNDATFVGVLS 323
>gi|225450622|ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
[Vitis vinifera]
Length = 485
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLT 50
MP ++ + +AM+ GL NGK +G +LF + +G RPN TFVGVL+
Sbjct: 301 MPQKNVVSWNAMISGLTFNGKGELGADLFEEMINKGVRPNDATFVGVLS 349
>gi|212275680|ref|NP_001130323.1| uncharacterized protein LOC100191417 [Zea mays]
gi|194688846|gb|ACF78507.1| unknown [Zea mays]
gi|413945339|gb|AFW77988.1| hypothetical protein ZEAMMB73_191992 [Zea mays]
Length = 401
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA--------YG 53
MP RD + SA++LG NG++ + + LF + G RPN+VTF+G L+A G
Sbjct: 206 MPRRDVISWSALILGHGLNGRSDVALGLFDRMSAEGIRPNSVTFLGALSACAHSGMVDKG 265
Query: 54 KIKIFGVTLMGIQPQ 68
G+ L GI+P+
Sbjct: 266 YAIFKGMKLSGIEPE 280
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D + +AM++GLA +G+ G ++LF + K G P+ VTFVGVLTA
Sbjct: 389 MNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTA 438
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA--YGKIKIFG 59
M RD T + M+ GL+ NGK+ +ELF + R RP VTFVGVL A +G + FG
Sbjct: 339 MKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFG 398
Query: 60 VTLMGIQPQNLWYYIDGQIDAW 81
+ ++ Y ++ QI+ +
Sbjct: 399 FEIFHSMARD--YRVEPQIEHY 418
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA--YGKIKIFG 59
M RD T + M+ GL+ NGK+ +ELF + R RP VTFVGVL A +G + FG
Sbjct: 303 MKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFG 362
Query: 60 VTLMGIQPQNLWYYIDGQIDAW 81
+ ++ Y ++ QI+ +
Sbjct: 363 FEIFHSMARD--YRVEPQIEHY 382
>gi|414879990|tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 1467
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D + ++++LGLA NG +++F S+ GPRPN VTF+GVL A
Sbjct: 1234 MEEKDTLSWNSIILGLANNGFEDEALDIFHSMLTEGPRPNEVTFLGVLIA 1283
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 31/51 (60%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M+ R+ + ++++ G A +G + +ELF + + G +PN +TF+ V+ A
Sbjct: 672 MLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINA 722
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D + +AM++GLA +G+ G ++LF + K G P+ VTFVGVLTA
Sbjct: 367 MNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTA 416
>gi|255556057|ref|XP_002519063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541726|gb|EEF43274.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 386
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M ++ T +AM+ G NG V+LF +++RGP PN+VTFV VL+A
Sbjct: 273 MKEKNVVTWTAMISGYGTNGHGRQAVQLFDEMKRRGPCPNSVTFVAVLSA 322
>gi|255567729|ref|XP_002524843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535903|gb|EEF37563.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 524
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 6/63 (9%)
Query: 11 SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKI--FGVTLMGIQPQ 68
+AM+ LA NG+ +++F +E++GP PN VTFV VLTA + K+ FG+ L Q
Sbjct: 296 NAMISCLANNGREKQALDMFEMMEEKGPSPNEVTFVVVLTACTRAKLVQFGMRLF----Q 351
Query: 69 NLW 71
++W
Sbjct: 352 SMW 354
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP +D T S+M++GLA +G + LF + G +PN VTFVGVL A
Sbjct: 181 MPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIA 230
>gi|115473599|ref|NP_001060398.1| Os07g0636900 [Oryza sativa Japonica Group]
gi|113611934|dbj|BAF22312.1| Os07g0636900, partial [Oryza sativa Japonica Group]
Length = 352
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP +D T S+M++GLA +G + LF + G +PN VTFVGVL A
Sbjct: 41 MPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIA 90
>gi|115463861|ref|NP_001055530.1| Os05g0409800 [Oryza sativa Japonica Group]
gi|50878475|gb|AAT85248.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113579081|dbj|BAF17444.1| Os05g0409800 [Oryza sativa Japonica Group]
gi|222631576|gb|EEE63708.1| hypothetical protein OsJ_18526 [Oryza sativa Japonica Group]
Length = 401
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + SA++LG NG++ + + LF + G RPN+VTF+G L+A
Sbjct: 208 MPRRDVISWSALILGHGLNGRSDVALRLFDEMAAEGVRPNSVTFLGALSA 257
>gi|297817744|ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322593|gb|EFH53014.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 597
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ + S M++G A NG +G + LF ++ G RPN VTF+GVL+A
Sbjct: 271 MKQRNVVSWSTMIVGYAMNGDSGEALALFTMMQNEGLRPNYVTFLGVLSA 320
>gi|242059059|ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D + ++++LGLA NG + +F S+ GPRPN VTF+GVL A
Sbjct: 704 MEEKDTLSWNSIILGLANNGFEDEALNIFYSMLTEGPRPNEVTFLGVLIA 753
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M+ R+ + ++++ G A +G + +ELF + + G RPN +TF+ V+ A
Sbjct: 133 MLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSVINA 183
>gi|115450020|ref|NP_001048611.1| Os02g0830000 [Oryza sativa Japonica Group]
gi|48716334|dbj|BAD22946.1| pentatricopeptide repeat-containing protein-like [Oryza sativa
Japonica Group]
gi|113538142|dbj|BAF10525.1| Os02g0830000 [Oryza sativa Japonica Group]
gi|125584254|gb|EAZ25185.1| hypothetical protein OsJ_08985 [Oryza sativa Japonica Group]
Length = 500
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFG 59
M RD +AM+ GL+ +G+ +ELF +++ G RPN VTF+ VL+A G+ + G
Sbjct: 283 MAERDVFAYTAMVSGLSDHGRCVEAIELFGRMQEEGVRPNEVTFICVLSACGRAGLVG 340
>gi|449438472|ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
gi|449493172|ref|XP_004159212.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
Length = 605
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 36/50 (72%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ T ++M+ G A+NG +G+ +++F ++ K G +P+ ++F+G+L A
Sbjct: 422 MPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFA 471
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
+D + ++M+ G + GK+G+ +ELF + G PN T V+ A +I
Sbjct: 125 KDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEI 175
>gi|302766513|ref|XP_002966677.1| hypothetical protein SELMODRAFT_85284 [Selaginella moellendorffii]
gi|300166097|gb|EFJ32704.1| hypothetical protein SELMODRAFT_85284 [Selaginella moellendorffii]
Length = 556
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP R+ + ++M++G AKNG + G LF+++ G P+ +TF+GV+ A G +
Sbjct: 133 MPDRETASWNSMIVGYAKNGHSREGFHLFLAMTLEGVEPDRITFLGVIDASGNL 186
>gi|302792587|ref|XP_002978059.1| hypothetical protein SELMODRAFT_11088 [Selaginella
moellendorffii]
gi|300154080|gb|EFJ20716.1| hypothetical protein SELMODRAFT_11088 [Selaginella
moellendorffii]
Length = 499
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP R+ + ++M++G AKNG + G LF+++ G P+ +TF+GV+ A G +
Sbjct: 8 MPDRETASWNSMIVGYAKNGHSREGFHLFLAMTLEGVEPDRITFLGVIDASGNL 61
>gi|125541717|gb|EAY88112.1| hypothetical protein OsI_09550 [Oryza sativa Indica Group]
Length = 500
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFG 59
M RD +AM+ GL+ +G+ +ELF +++ G RPN VTF+ VL+A G+ + G
Sbjct: 283 MAERDVFAYTAMVSGLSDHGRCVEAIELFGRMQEEGVRPNEVTFICVLSACGRAGLVG 340
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFG 59
+M RD +AM++G +NG+N +ELF S+ + GP PN+ T VL+A + G
Sbjct: 389 VMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLG 447
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MMP R+ + ++M+ G A++G ++LF ++ +GP P+ VTFVGVL+A
Sbjct: 754 MMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSA 804
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 34/46 (73%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
D + +AM+ G A++G + +ELF +I+K G RP++VTF+GVLTA
Sbjct: 484 DIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTA 529
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 34/46 (73%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
D + +AM+ G A++G + +ELF +I+K G RP++VTF+GVLTA
Sbjct: 484 DIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTA 529
>gi|297842491|ref|XP_002889127.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334968|gb|EFH65386.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 466
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ + S+M+ G A NG +E F + + G RPN +TFVGVL+A
Sbjct: 280 MPQRNVVSWSSMITGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSA 329
>gi|356518302|ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 535
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M +D + S M+ GLA +GK + +F ++K G PN VTFVGVL+A ++
Sbjct: 299 MIEKDVISWSTMIGGLANHGKGYAAIRVFEDMQKAGVTPNGVTFVGVLSACAHAGLWNEG 358
Query: 62 LMGIQPQNLWYYIDGQIDAW 81
L + Y+++ QI+ +
Sbjct: 359 LRYFDVMRVDYHLEPQIEHY 378
>gi|326530660|dbj|BAK01128.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 613
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 9/76 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLT--AYGKIKIFG 59
M R + ++M++G +G++ +ELF+ +E+ GPRPN TFV VL+ A+G + + G
Sbjct: 390 MGERSVPSWNSMIIGYGLHGQSEKALELFLEMERTGPRPNETTFVCVLSSCAHGGLVLEG 449
Query: 60 -------VTLMGIQPQ 68
V L G++P+
Sbjct: 450 WWCFDRMVRLYGVEPK 465
>gi|225427280|ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 719
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M R + ++M++G +G+ +E+F+ +EKRGP PN TF+ VL+A G+
Sbjct: 414 MSNRSVVSWNSMIMGYGMHGQADKALEMFLDMEKRGPMPNDATFICVLSACAHS---GMI 470
Query: 62 LMGIQPQNLWYYID 75
L G W+Y D
Sbjct: 471 LEG------WWYFD 478
>gi|297824259|ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325851|gb|EFH56271.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 542
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
P + + ++M+LGLA NG ++LF+ +E+ G P++V+F+GVLTA
Sbjct: 320 PTKQLSCWNSMILGLANNGCEERAMDLFLELERTGLEPDSVSFIGVLTA 368
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ + ++M+ G +NG+ +E+F +++R +P+ T V +L A
Sbjct: 218 MPQRNGVSWNSMISGFVRNGRFKDALEMFREMQERDVKPDGFTMVSLLNA 267
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 9/76 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA--YGKIKIFG 59
M ++ T ++M++G A +GK+ VELF + K+G P++VTFVGVL A +G + G
Sbjct: 310 MKEKNVITYNSMIMGFALHGKSVEAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELG 369
Query: 60 VTLM-------GIQPQ 68
+ GI+PQ
Sbjct: 370 FEIFHSMAKDYGIEPQ 385
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D +AM+ GL +NG++ +E+F ++++ PN VT V VL+A
Sbjct: 212 KDTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSA 258
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 35/50 (70%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP D + +++++G A+NG+ M ++ F S+ + G +P+ +TFVGVL+A
Sbjct: 358 MPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSA 407
>gi|255570455|ref|XP_002526186.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534490|gb|EEF36190.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 446
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 14/89 (15%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI------ 55
MP RD+ + + ++ G AKNG+ G VE F+ ++ G +P T V VL A ++
Sbjct: 116 MPSRDSVSYNTVITGFAKNGRAGKAVEAFVRMQTEGFKPTEYTHVSVLNACTQLLDLRKG 175
Query: 56 -KIFGVTLMGIQPQNLWYYIDGQIDAWQA 83
+I G L G Y+ G + W A
Sbjct: 176 KQIHGRILTG-------NYLGGNVFIWNA 197
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIF 58
MMP R + +AM+ G A+NG++ + L+ + + RP+ +TFVGVL+A +F
Sbjct: 383 MMPARSVVSWNAMLGGYARNGQDLEALALYEKMFQENIRPDNITFVGVLSACNHAGLF 440
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M +D + S M+ GLA+NG + +ELF S+++ G RPN +T +GVL F +
Sbjct: 312 MVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVL--------FACS 363
Query: 62 LMGIQPQNLWYY 73
G+ + WYY
Sbjct: 364 HAGLVEKG-WYY 374
>gi|297742136|emb|CBI33923.3| unnamed protein product [Vitis vinifera]
Length = 461
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M R + ++M++G +G+ +E+F+ +EKRGP PN TF+ VL+A G+
Sbjct: 265 MSNRSVVSWNSMIMGYGMHGQADKALEMFLDMEKRGPMPNDATFICVLSACAHS---GMI 321
Query: 62 LMGIQPQNLWYYID 75
L G W+Y D
Sbjct: 322 LEG------WWYFD 329
>gi|255556669|ref|XP_002519368.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541435|gb|EEF42985.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 524
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMS-IEKRGPRPNAVTFVGVLTAYGKI 55
MP RDA + + M+ G A+NG++ M +ELF I+ + +P+ VT V +++A G +
Sbjct: 280 MPERDAVSWNTMISGYAQNGQSAMAIELFKEMIDAKDSQPDEVTMVSIISACGHL 334
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + ++++ G A +G+ ++L +S+++ G P+ VT++GVLTA
Sbjct: 382 METRDVVSYNSLIGGFAAHGEGNEAIKLLLSMKEEGVDPDHVTYIGVLTA 431
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + +AM+ GL++NG +ELF ++ G +P+ VTFV +L+A
Sbjct: 472 MPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSA 521
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+++ T SAM+ G A++G + ++LF S+ G RP+ TFVGV+ A
Sbjct: 273 KNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINA 319
>gi|147780613|emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
Length = 654
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + +AM+ GL++NG +ELF ++ G +P+ VTFV +L+A
Sbjct: 472 MPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSA 521
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+++ T SAM+ G A++G + ++LF S+ G RP+ TFVGV+ A
Sbjct: 273 KNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINA 319
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D + ++++ GLA NGK +ELF +++ G RP+ +TF+GVL+A
Sbjct: 434 KDTASWTSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSA 480
>gi|413939596|gb|AFW74147.1| hypothetical protein ZEAMMB73_269656 [Zea mays]
Length = 524
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFG 59
RD +AM+ GL+ +G+ G ++LF + G RPN VTF+ VLTA G+ + G
Sbjct: 293 RDVFAYTAMISGLSDHGRCGEAIDLFGQMLVEGVRPNEVTFICVLTACGRAGLVG 347
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 26/54 (48%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP R+ SAM+ G G V LF + + RPN VGVLTA G +
Sbjct: 184 MPRRNDVAWSAMLSAYVAAGSFGDAVRLFEDMLRSCVRPNRAAVVGVLTACGAL 237
>gi|359476090|ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Vitis vinifera]
Length = 515
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + S M++GLA +G+ +ELF ++K PN +TFVG+L+A
Sbjct: 284 MNERDVISWSTMIVGLANHGRAREAIELFQEMQKAKVEPNIITFVGLLSA 333
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP RD + S M+ GLA+NGK+ + +F ++ G PN +T VGVL F +
Sbjct: 339 MPQRDVISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVL--------FACS 390
Query: 62 LMGIQPQNLWYY 73
G+ ++ WYY
Sbjct: 391 HAGLV-EDGWYY 401
>gi|326506094|dbj|BAJ91286.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 625
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELF---MSIEKRGPRPNAVTFVGVLTA 51
+MP RD + +AM+ GLA+NG++ +EL+ + PN+VTFVGVL+A
Sbjct: 386 IMPQRDIISWNAMICGLAQNGQSARSLELYDEMTQLHYESVTPNSVTFVGVLSA 439
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + S M++GLA +G+ +ELF ++K PN +TFVG+L+A
Sbjct: 310 MNERDVISWSTMIVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSA 359
>gi|255556101|ref|XP_002519085.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541748|gb|EEF43296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1157
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVTLMG 64
RD+ + MM G A NG ++LF + ++G RPN VTFV +L+A + G+ L+
Sbjct: 928 RDSILYNVMMAGYAHNGHEIEAIQLFQEMLEKGVRPNVVTFVALLSACRHCGLVGLQLL- 986
Query: 65 IQPQN 69
+ P N
Sbjct: 987 LSPLN 991
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D +T ++M+ GLA +GK+ VELF + K RPN +TFVGVL A
Sbjct: 321 KDVSTYNSMIGGLALHGKSIEAVELFSEMLKERVRPNGITFVGVLNA 367
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
M RD + ++ GL +NG+ G+E+F ++ +G PN VTFV VL+A ++
Sbjct: 217 MGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQL 270
>gi|242096286|ref|XP_002438633.1| hypothetical protein SORBIDRAFT_10g023240 [Sorghum bicolor]
gi|241916856|gb|EER90000.1| hypothetical protein SORBIDRAFT_10g023240 [Sorghum bicolor]
Length = 529
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RDA +A++ GLA NG+ +ELF +++ +P+ +TF+GVL A
Sbjct: 339 MQGRDAAAWTAIICGLATNGQASKALELFEEMQRSKTKPDGITFIGVLNA 388
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 37/51 (72%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+MP R+ + +AM++G A+NG + +ELF ++ ++ +P+ VTF+G+L+A
Sbjct: 382 LMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSA 432
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 37/51 (72%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+MP R+ + +AM++G A+NG + +ELF ++ ++ +P+ VTF+G+L+A
Sbjct: 382 LMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSA 432
>gi|225446849|ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M P + ++ + M+LGLA NG ++LF +E RP+ VTFVGVLTA
Sbjct: 317 MAPLKGLSSWNTMILGLAMNGCENEAIQLFSRLECSNLRPDDVTFVGVLTA 367
>gi|225217011|gb|ACN85298.1| EMB2261 putative [Oryza coarctata]
Length = 621
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R+ T +AM+ G A+NG ++LF + K GPRP+ ++FVGVL A
Sbjct: 401 RNTITWNAMIGGFAQNGHGERAIDLFDRMVKEGPRPDYISFVGVLFA 447
>gi|15228028|ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g42920, chloroplastic; Flags: Precursor
gi|4512663|gb|AAD21717.1| hypothetical protein [Arabidopsis thaliana]
gi|20197867|gb|AAM15291.1| hypothetical protein [Arabidopsis thaliana]
gi|110738441|dbj|BAF01146.1| hypothetical protein [Arabidopsis thaliana]
gi|330255093|gb|AEC10187.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
P + + ++M+LGLA NG ++LF +E+ G P++V+F+GVLTA
Sbjct: 320 PKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTA 368
>gi|356532922|ref|XP_003535018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Glycine max]
Length = 611
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ T +AM+ G A+NG+ GVELF + K G RP+ ++FV VL A
Sbjct: 418 MEARNLITWNAMIGGFAQNGRGQEGVELFEEMVKEGVRPDWISFVNVLFA 467
>gi|356502600|ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 518
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD +AM+ GLA +G +++F +EK G +P+ +TF+ V TA
Sbjct: 298 MPERDIVCWNAMISGLAMHGDGASALKMFSEMEKTGIKPDDITFIAVFTA 347
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP +D T +A++LGLA G+ ++ F + +G +P+A+TFVGVL A
Sbjct: 349 MPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAA 398
>gi|222628911|gb|EEE61043.1| hypothetical protein OsJ_14892 [Oryza sativa Japonica Group]
Length = 717
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
P +D ++M+ G A NGK G+ELF + K+G P++VTF+G L +
Sbjct: 550 PSQDVILWNSMIFGCAYNGKGEYGLELFFEMSKQGITPDSVTFLGALVS 598
>gi|115458508|ref|NP_001052854.1| Os04g0436800 [Oryza sativa Japonica Group]
gi|38344064|emb|CAD40816.2| OSJNBa0006B20.8 [Oryza sativa Japonica Group]
gi|113564425|dbj|BAF14768.1| Os04g0436800 [Oryza sativa Japonica Group]
gi|116310780|emb|CAH67572.1| H0315A08.2 [Oryza sativa Indica Group]
gi|215704891|dbj|BAG94919.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194892|gb|EEC77319.1| hypothetical protein OsI_15984 [Oryza sativa Indica Group]
Length = 717
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
P +D ++M+ G A NGK G+ELF + K+G P++VTF+G L +
Sbjct: 550 PSQDVILWNSMIFGCAYNGKGEYGLELFFEMSKQGITPDSVTFLGALVS 598
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+MP R+ + ++M+ G A++G G ++LF +++ G P+ VTFVGVL+A
Sbjct: 720 LMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSA 770
>gi|90657651|gb|ABD96949.1| hypothetical protein [Cleome spinosa]
Length = 639
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + ++++ GLA NG ++ F +E+ G RP+ +TF+GVLTA
Sbjct: 408 MKERDTASWTSVIYGLAVNGMTSKALDFFSQMEEAGFRPDDITFIGVLTA 457
>gi|296081956|emb|CBI20961.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + S M++GLA +G+ +ELF ++K P+ +TFVG+LTA
Sbjct: 326 MKERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTA 375
>gi|225430143|ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + S M++GLA +G+ +ELF ++K P+ +TFVG+LTA
Sbjct: 310 MKERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTA 359
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M +D + S M+ GLA+NG + + LF S++ +GP+PN +T +GVL F +
Sbjct: 543 MAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVL--------FACS 594
Query: 62 LMGIQPQNLWYY 73
G+ + WYY
Sbjct: 595 HAGLVNEG-WYY 605
>gi|125595818|gb|EAZ35598.1| hypothetical protein OsJ_19887 [Oryza sativa Japonica Group]
Length = 495
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T ++M+LGLA +G+ + LF +++ G PN VT +GVLTA
Sbjct: 302 MARRDVYTYTSMILGLAMHGRGEDALSLFAGMQRAGVTPNEVTLLGVLTA 351
>gi|297724409|ref|NP_001174568.1| Os06g0114366 [Oryza sativa Japonica Group]
gi|218197444|gb|EEC79871.1| hypothetical protein OsI_21372 [Oryza sativa Indica Group]
gi|255676656|dbj|BAH93296.1| Os06g0114366 [Oryza sativa Japonica Group]
Length = 509
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T ++M+LGLA +G+ + LF +++ G PN VT +GVLTA
Sbjct: 316 MARRDVYTYTSMILGLAMHGRGEDALSLFAGMQRAGVTPNEVTLLGVLTA 365
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ + S M++G A NG + + LF +++ G RPN VTF+GVL+A
Sbjct: 271 MKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSA 320
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP +++ T +A++ G+A NG+ +ELF S+ + G P VTF+GVL A
Sbjct: 383 MPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMA 432
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP +D T +A+++GLA G+ +ELF ++ +P+A+TFVGVL A
Sbjct: 269 MPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAA 318
>gi|224123726|ref|XP_002330193.1| predicted protein [Populus trichocarpa]
gi|222871649|gb|EEF08780.1| predicted protein [Populus trichocarpa]
Length = 485
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIF 58
MP ++ + + ++ GLA NG +GVEL + G RPN TFVGVL+ +F
Sbjct: 301 MPRKNVISWNTLISGLALNGNGELGVELLEEMMNEGVRPNDATFVGVLSCCAHAGLF 357
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP +D T +A+++GLA G+ +ELF ++ +P+A+TFVGVL A
Sbjct: 400 MPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAA 449
>gi|356513796|ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 595
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP R + ++M++G +G +ELF+ +EK G +PN TF+ VL+A T
Sbjct: 365 MPVRSVVSWNSMIMGYGLHGIGDKALELFLEMEKAGQQPNDATFISVLSA--------CT 416
Query: 62 LMGIQPQNLWYY 73
G+ + WY+
Sbjct: 417 HAGMVMEGWWYF 428
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + +AM+ GL++NG +ELF + ++ +P+ VTFV VL+A
Sbjct: 475 MPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSA 524
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + +AM+ GL++NG +ELF + G +P+ VTFV +L+A
Sbjct: 482 MPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSA 531
>gi|242058523|ref|XP_002458407.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
gi|241930382|gb|EES03527.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
Length = 695
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP RD S M+ G ++NG+ +ELF ++ +PN VT VGVL+A ++ G
Sbjct: 366 MPRRDVVAWSTMIAGYSQNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQL---GSD 422
Query: 62 LMGIQPQNLWYYIDGQ 77
+G Q N YI+ Q
Sbjct: 423 ELGEQIGN---YIESQ 435
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD T +AM+ GL++NG+ +ELF + +P+ VTFV VL+A
Sbjct: 477 MPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSA 526
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
+D T SAM+ G A+ G + + LF ++ G +P+ TFVGV+ A I
Sbjct: 278 KDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDI 328
>gi|449450476|ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 692
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD T +AM+ GL++NG+ +ELF + +P+ VTFV VL+A
Sbjct: 459 MPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSA 508
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
+D T SAM+ G A+ G + + LF ++ G +P+ TFVGV+ A I
Sbjct: 278 KDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDI 328
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + S M+ GLA+NGK+ + +F ++ +G PN VT VGVL A
Sbjct: 328 MPQRDVISWSTMVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFA 377
>gi|413941558|gb|AFW74207.1| hypothetical protein ZEAMMB73_978994 [Zea mays]
Length = 580
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M+ R+ T ++M+ G +G G V+LF + ++GP PN VTFV VL+A
Sbjct: 266 MLQERNVVTWTSMIAGYGMHGHGGEAVKLFNLMRQQGPPPNDVTFVAVLSA 316
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
M RD + +AM++G A+NG +ELF + + G +P+ +T +GVL+A G
Sbjct: 453 MMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACG 504
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP +D T S+M++GLA +G + LF + +G +PN +TF+GVL A
Sbjct: 274 MPVKDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVLIA 323
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ T +AM+ G +G +ELF + GPRPN +TFV VL+A
Sbjct: 351 MKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSA 400
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ T +AM+ G +G +ELF + GPRPN +TFV VL+A
Sbjct: 287 MKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSA 336
>gi|255564603|ref|XP_002523296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537384|gb|EEF39012.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 353
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKR-GPRPNAVTFVGVLTA 51
+MP R+ + +AM+ G ++NG+ +ELF+ +EK G RPN VT +L A
Sbjct: 173 LMPDRNVVSWTAMISGYSQNGRYAKALELFLKMEKENGLRPNEVTIASILPA 224
>gi|297739678|emb|CBI29860.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP +D S+M++GLA NG +E F +E+ +PN VTF+GVL+A
Sbjct: 323 MPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSA 372
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP +D S+M++GLA NG +E F +E+ +PN VTF+GVL+A
Sbjct: 254 MPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSA 303
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
M RD T SAM+ G A+NG++ +ELF +++ +PN VT V VL+A ++
Sbjct: 289 MARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQL 342
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P RD T ++M++GLA NG + L+ +++ +PN +TFVG++TA
Sbjct: 390 LPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTA 439
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 33/51 (64%)
Query: 4 PRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGK 54
P D T S+++ GL K+G+ +LF +++RG +P+++TF ++ A GK
Sbjct: 181 PPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGK 231
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIK--IFGVTLM 63
D+ T +A+M L K G+ +EL +++RG +P VT+ ++ +GK+ + L+
Sbjct: 218 DSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLL 277
Query: 64 ------GIQPQNLWY--YIDGQIDAWQ--AACQI 87
G +P + Y I G I A Q ACQ+
Sbjct: 278 DEMKRNGCKPDVVTYSCLITGLIKASQLDEACQV 311
>gi|413943789|gb|AFW76438.1| hypothetical protein ZEAMMB73_890738 [Zea mays]
Length = 529
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +DA +A++ GLA NG+ +ELF +++ +P+ +TF+GVL+A
Sbjct: 339 MQGKDAAAWTAIICGLATNGQASKALELFEEMQRSKTKPDGITFIGVLSA 388
>gi|357118977|ref|XP_003561223.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 604
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 9/76 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLT--AYGKIKIFG 59
M R + ++M++G +G++ +ELF+ +EK GPRPN TF+ VL+ A+G + + G
Sbjct: 378 MSERSVPSWNSMIIGYGLHGQSEKALELFLEMEKSGPRPNETTFICVLSSCAHGGLVLEG 437
Query: 60 -------VTLMGIQPQ 68
V G +P+
Sbjct: 438 WWCFDRMVRFYGFEPK 453
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M RD T S M+ GLA+NG + ++LF ++ G +PN +T VGVL F +
Sbjct: 319 MKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVL--------FACS 370
Query: 62 LMGIQPQNLWYY 73
G+ ++ WYY
Sbjct: 371 HAGLL-EDGWYY 381
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M RD T S M+ GLA+NG + ++LF ++ G +PN +T VGVL F +
Sbjct: 319 MKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVL--------FACS 370
Query: 62 LMGIQPQNLWYY 73
G+ ++ WYY
Sbjct: 371 HAGLL-EDGWYY 381
>gi|242080213|ref|XP_002444875.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
gi|241941225|gb|EES14370.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
Length = 583
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M+ R+ T ++M+ G +G G V+LF + ++GP PN VTFV VL+A
Sbjct: 269 MLQERNVVTWTSMIAGYGMHGHGGEAVKLFDLMRQQGPPPNDVTFVAVLSA 319
>gi|449516776|ref|XP_004165422.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
Length = 427
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T S +++ LA +GK ++LF +E+ G +PN + F+GVL A
Sbjct: 242 MKDRDVVTYSTLIIALADHGKAKEALDLFSKMEEEGIKPNQICFIGVLNA 291
>gi|449446907|ref|XP_004141212.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
Length = 456
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T S +++ LA +GK ++LF +E+ G +PN + F+GVL A
Sbjct: 271 MKDRDVVTYSTLIIALADHGKAKEALDLFSKMEEEGIKPNQICFIGVLNA 320
>gi|125540362|gb|EAY86757.1| hypothetical protein OsI_08137 [Oryza sativa Indica Group]
Length = 493
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ + ++M+ GLA NG + LF ++ G RPN +TF+G+L+A
Sbjct: 298 MPVRNIYSWNSMIAGLAMNGSERQALSLFWKMQLAGVRPNDITFIGLLSA 347
>gi|15233292|ref|NP_188854.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273371|sp|Q9LIE7.1|PP246_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22150, chloroplastic; Flags: Precursor
gi|11994734|dbj|BAB03063.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|110739449|dbj|BAF01634.1| hypothetical protein [Arabidopsis thaliana]
gi|332643073|gb|AEE76594.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 820
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 33/47 (70%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R++ T + M+LG ++G + LF+S+++ G +P+A+TFV VL+A
Sbjct: 585 RNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSA 631
>gi|297599623|ref|NP_001047477.2| Os02g0625100 [Oryza sativa Japonica Group]
gi|125582938|gb|EAZ23869.1| hypothetical protein OsJ_07586 [Oryza sativa Japonica Group]
gi|255671102|dbj|BAF09391.2| Os02g0625100 [Oryza sativa Japonica Group]
Length = 493
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ + ++M+ GLA NG + LF ++ G RPN +TF+G+L+A
Sbjct: 298 MPVRNIYSWNSMIAGLAMNGSERQALSLFWKMQLAGVRPNDITFIGLLSA 347
>gi|302780000|ref|XP_002971775.1| hypothetical protein SELMODRAFT_60139 [Selaginella moellendorffii]
gi|300160907|gb|EFJ27524.1| hypothetical protein SELMODRAFT_60139 [Selaginella moellendorffii]
Length = 516
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD+ + +AM+ A+NG +++F+++E G P+ +TFV VL+A
Sbjct: 345 MPVRDSVSWNAMLTAFARNGHGEAALDVFLAMELEGLVPDIITFVNVLSA 394
>gi|255564460|ref|XP_002523226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537522|gb|EEF39147.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 488
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
MP RD + S+++LG +G + + LF + RG +PN VTF+G+L+A G
Sbjct: 301 MPERDVFSWSSLILGYGLSGNVSVALCLFDQMHMRGIKPNDVTFLGILSACG 352
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 32/47 (68%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D + ++++ GLA NGK + LF +E+ G +P+ +TF+GVL+A
Sbjct: 494 KDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSA 540
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 32/47 (68%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D + ++++ GLA NGK + LF +E+ G +P+ +TF+GVL+A
Sbjct: 540 KDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSA 586
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP +++ T +A++ G+A NG+ +ELF S+ K P VTF+GVL A
Sbjct: 382 MPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMA 431
>gi|242038381|ref|XP_002466585.1| hypothetical protein SORBIDRAFT_01g010380 [Sorghum bicolor]
gi|241920439|gb|EER93583.1| hypothetical protein SORBIDRAFT_01g010380 [Sorghum bicolor]
Length = 529
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAY 52
RD + SAM++G +GK + LF + K PNAVTFVG+L+AY
Sbjct: 347 RDVVSYSAMIVGCGMHGKLNEAISLFKEMSKARIDPNAVTFVGLLSAY 394
>gi|302760807|ref|XP_002963826.1| hypothetical protein SELMODRAFT_79356 [Selaginella moellendorffii]
gi|300169094|gb|EFJ35697.1| hypothetical protein SELMODRAFT_79356 [Selaginella moellendorffii]
Length = 535
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD+ + +AM+ A+NG +++F+++E G P+ +TFV VL+A
Sbjct: 349 MPVRDSVSWNAMLTAFARNGHGEAALDVFLAMELEGLVPDIITFVNVLSA 398
>gi|414884999|tpg|DAA61013.1| TPA: hypothetical protein ZEAMMB73_343744 [Zea mays]
Length = 557
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 33/51 (64%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+M R + ++M++G +G + +ELFM +EK GP+PN TF+ +L++
Sbjct: 374 LMTERSVASWNSMIIGYGLHGYSEKALELFMEMEKNGPQPNETTFICILSS 424
>gi|357152230|ref|XP_003576051.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Brachypodium distachyon]
Length = 468
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAY 52
MP R T +A++ GLA +G + +F + + G PNA TFVGVL+AY
Sbjct: 281 MPERRTATWNALISGLAHHGHGKYALVMFQQMLQEGVPPNATTFVGVLSAY 331
>gi|357153150|ref|XP_003576355.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Brachypodium distachyon]
Length = 617
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF---MSIEKRGPRPNAVTFVGVLTA 51
MP RD + +AM+ GLA+NG++ +EL+ + + + PN+VT VGVL+A
Sbjct: 392 MPRRDIVSWNAMICGLAQNGRSARALELYDEMLRLHQESITPNSVTCVGVLSA 444
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
M RD + +AM++G A+NG +ELF + G +P+ +T +GVL+A G
Sbjct: 453 MMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACG 504
>gi|326489701|dbj|BAK01831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 484
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R + ++M++G A NG+ +E F ++ ++G RP+AVTF GVLTA
Sbjct: 264 MRNRTVVSWNSMIVGFAANGRCTDAIEHFEAMRRKGFRPDAVTFTGVLTA 313
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 33/61 (54%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP D + +A++ G KNG++ ++ F ++ G P+ VT V ++A ++ G+
Sbjct: 163 MPEPDKVSWTALIDGCVKNGRHDEAIDCFHAMLLDGVEPDYVTLVAAISACAEVGALGLG 222
Query: 62 L 62
+
Sbjct: 223 M 223
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M P+ + +AM+ GLA +G M +ELF + G P+ +TFVGVL+A
Sbjct: 427 MKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSA 476
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P RDA + +AM+ G A++G+ + F +++ PN T V VL+A
Sbjct: 224 IPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSA 273
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M ++ T +A++ GLA NG+ M +E F S+ + +PN VTF+GVL+A
Sbjct: 384 MSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSA 433
>gi|297728355|ref|NP_001176541.1| Os11g0483950 [Oryza sativa Japonica Group]
gi|77550893|gb|ABA93690.1| pentatricopeptide repeat-containing protein, putative [Oryza sativa
Japonica Group]
gi|125577152|gb|EAZ18374.1| hypothetical protein OsJ_33904 [Oryza sativa Japonica Group]
gi|255680094|dbj|BAH95269.1| Os11g0483950 [Oryza sativa Japonica Group]
Length = 478
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
MP R T +A++ GLA +G + + F + + G PN T VGVL+AYG
Sbjct: 290 MPERQTATWNALITGLAHHGHGEVALATFHRMRRDGVPPNGATLVGVLSAYG 341
>gi|218185745|gb|EEC68172.1| hypothetical protein OsI_36118 [Oryza sativa Indica Group]
Length = 443
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
MP R T +A++ GLA +G + + F + + G PN T VGVL+AYG
Sbjct: 255 MPERQTATWNALITGLAHHGHGEVALATFHRMRRDGVPPNGATLVGVLSAYG 306
>gi|297800844|ref|XP_002868306.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314142|gb|EFH44565.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 458
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + S+++LG +G + ++LF + + G PNAVTF+GVL+A
Sbjct: 277 MPRRDVISWSSLILGYGLDGDVVVSIKLFDEMLQEGIEPNAVTFLGVLSA 326
>gi|225216998|gb|ACN85287.1| EMB2261 putative [Oryza australiensis]
Length = 626
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R+ T +AM+ G A+NG + LF + + GPRP+ ++F+GVL A
Sbjct: 408 RNTITWNAMISGFAQNGHGERAINLFNRMVREGPRPDYISFIGVLFA 454
>gi|357503973|ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355497290|gb|AES78493.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 541
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP +DA+ +AM+ A +G + F+ +EK G +PN VTFVG+L+A
Sbjct: 326 MPEKDASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSA 375
>gi|15223858|ref|NP_177842.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215262|sp|Q3ECB8.1|PP128_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g77170
gi|332197823|gb|AEE35944.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 467
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ + S+M++G A NG +E F + + G RPN +TFVGVL+A
Sbjct: 281 MRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSA 330
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M RD T S M+ GLA+NG + ++LF ++ G +PN +T VGVL F +
Sbjct: 271 MKERDVITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVL--------FACS 322
Query: 62 LMGIQPQNLWYY 73
G+ ++ WYY
Sbjct: 323 HAGLL-EDGWYY 333
>gi|15221713|ref|NP_174428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169458|sp|Q9C866.1|PPR65_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31430
gi|12322531|gb|AAG51260.1|AC027135_1 PPR-repeat protein [Arabidopsis thaliana]
gi|332193234|gb|AEE31355.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 570
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 32/47 (68%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD + ++++ GLA NG +G ++L+ +E G R +A+TFV VLTA
Sbjct: 343 RDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTA 389
>gi|297599966|ref|NP_001048246.2| Os02g0769900 [Oryza sativa Japonica Group]
gi|46805413|dbj|BAD16915.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255671273|dbj|BAF10160.2| Os02g0769900 [Oryza sativa Japonica Group]
Length = 438
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R + ++M++G A NG+ VE F ++ + G +P+AVTF GVLTA
Sbjct: 208 MRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPDAVTFTGVLTA 257
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 34/61 (55%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP D + +A++ G KNG++ ++ F ++ G P+ VT + V++A ++ G+
Sbjct: 107 MPAPDKVSWTALIDGCVKNGRHDEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLG 166
Query: 62 L 62
+
Sbjct: 167 M 167
>gi|297739162|emb|CBI28813.3| unnamed protein product [Vitis vinifera]
Length = 500
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKI 57
M ++ SAM+ GLA NG+ + LF +E +G +PN VTF+G+L A K+
Sbjct: 314 MKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKL 369
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKI 57
M ++ SAM+ GLA NG+ + LF +E +G +PN VTF+G+L A K+
Sbjct: 329 MKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKL 384
>gi|357441857|ref|XP_003591206.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480254|gb|AES61457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 490
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVL 49
M ++ + +AM+ GL NGK +GVELF + ++G P+ TFVGVL
Sbjct: 302 MTKKNVVSWNAMISGLGLNGKGELGVELFEKMARKGVTPSDSTFVGVL 349
>gi|449453704|ref|XP_004144596.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g10330-like [Cucumis sativus]
Length = 477
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M R+ T +AM+ A NG+ ++LF +++ G PN VTFV +LTA + K+ +
Sbjct: 283 MKKREVCTWNAMISSFASNGRETEALDLFATMKVEGIHPNEVTFVAILTACARGKLVKLG 342
Query: 62 LMGIQ 66
L Q
Sbjct: 343 LQLFQ 347
>gi|226496045|ref|NP_001146017.1| uncharacterized protein LOC100279548 [Zea mays]
gi|219885333|gb|ACL53041.1| unknown [Zea mays]
gi|414872421|tpg|DAA50978.1| TPA: hypothetical protein ZEAMMB73_118572 [Zea mays]
Length = 528
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAY 52
RD + SAM++G +GK V LF + K PNAVTFVG+L+AY
Sbjct: 346 RDVVSYSAMIVGCGMHGKLNEAVGLFKEMSKARIDPNAVTFVGLLSAY 393
>gi|449528931|ref|XP_004171455.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g10330-like [Cucumis
sativus]
Length = 477
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M R+ T +AM+ A NG+ ++LF +++ G PN VTFV +LTA + K+ +
Sbjct: 283 MKKREVCTWNAMISSFASNGRETEALDLFATMKVEGIHPNEVTFVAILTACARGKLVKLG 342
Query: 62 LMGIQ 66
L Q
Sbjct: 343 LQLFQ 347
>gi|357474431|ref|XP_003607500.1| hypothetical protein MTR_4g078750 [Medicago truncatula]
gi|355508555|gb|AES89697.1| hypothetical protein MTR_4g078750 [Medicago truncatula]
Length = 470
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+M R+ T +AM+ LA NG+ ++LF ++ +G +PN++TFV VLTA
Sbjct: 285 VMVVREVCTWNAMISSLASNGREKEALDLFEKMKLQGLKPNSITFVAVLTA 335
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M P+ + +AM+ GLA +G M +ELF + G P+ +TFVGVL+A
Sbjct: 427 MKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSA 476
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P RDA + +AM+ G A++G+ + F +++ PN T V VL+A
Sbjct: 224 IPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSA 273
>gi|356502400|ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 591
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
D T+ ++++ GLA NGK +ELF +++ G +P+ +TFV VL+A G
Sbjct: 406 DTTSWTSIICGLAMNGKTSEALELFEAMQTCGLKPDDITFVAVLSACG 453
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 34/50 (68%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P ++A T +AM+ GLA +G +E F ++ + G +P+ +TF+GVL+A
Sbjct: 421 IPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVLSA 470
>gi|449452160|ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Cucumis sativus]
Length = 532
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD +AM+ G+A +G ++LFM +EK G +P+ +TF+ VL A
Sbjct: 298 MSQRDNVCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVLAA 347
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M +D + S M+ GLA+NG + ++LF S++ G +PN VT VGVL F +
Sbjct: 223 MVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVL--------FACS 274
Query: 62 LMGIQPQNLWYY 73
G+ + L+Y+
Sbjct: 275 HAGLVEEGLYYF 286
>gi|357133503|ref|XP_003568364.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Brachypodium distachyon]
Length = 554
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP-RPNAVTFVGVLTA 51
M +D + S M+ GLA +G+ V+LF +E++G +PN +TFVG+L+A
Sbjct: 311 MAEKDVISWSTMVGGLAAHGRAQEAVQLFTEMERQGTVKPNGITFVGLLSA 361
>gi|255575758|ref|XP_002528778.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531781|gb|EEF33600.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 518
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 9/74 (12%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP + + ++M++G A NG +E F+ +EK PNA TFV VL+A ++
Sbjct: 412 MPHKSVVSWNSMIMGYAINGHAEKALETFLEMEKSSMMPNAATFVSVLSACSHAELL--- 468
Query: 62 LMGIQPQNLWYYID 75
L G W+Y D
Sbjct: 469 LEG------WWYFD 476
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ + S+M++G A +G G +ELF + K +PN VTF+GVLTA
Sbjct: 335 MEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTA 384
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 32/54 (59%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
+P +D +AM+ G A+N + +E+F ++ G + + VT VGV++A ++
Sbjct: 232 LPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQL 285
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P +D SAMM+G +G+ + LF ++ + G PN VTFVG+LTA
Sbjct: 436 IPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTA 485
>gi|51091970|dbj|BAD35499.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 665
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R+ T +AM+ G A+NG + LF + + GPRP+ ++F+GVL A
Sbjct: 458 RNTITWNAMIGGFAQNGHGERAINLFNRMVREGPRPDYISFIGVLFA 504
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 32/47 (68%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D + ++++ GLA NGK +ELF + + G +P+ +TF+GVL+A
Sbjct: 429 KDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSA 475
>gi|297738897|emb|CBI28142.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 32/47 (68%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D + ++++ GLA NGK +ELF + + G +P+ +TF+GVL+A
Sbjct: 338 KDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSA 384
>gi|225216963|gb|ACN85255.1| EMB2261 putative [Oryza officinalis]
Length = 622
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R+ T +AM+ G A+NG + LF + + GPRP+ ++F+GVL A
Sbjct: 404 RNTITWNAMIGGFAQNGHGERAINLFNRMVREGPRPDYISFIGVLFA 450
>gi|225216917|gb|ACN85213.1| EMB2261 putative [Oryza glaberrima]
Length = 615
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R+ T +AM+ G A+NG + LF + + GPRP+ ++F+GVL A
Sbjct: 408 RNTITWNAMIGGFAQNGHGERAINLFNRMVREGPRPDYISFIGVLFA 454
>gi|225216882|gb|ACN85180.1| EMB2261 putative [Oryza nivara]
gi|225216899|gb|ACN85196.1| EMB2261 putative [Oryza rufipogon]
Length = 615
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R+ T +AM+ G A+NG + LF + + GPRP+ ++F+GVL A
Sbjct: 408 RNTITWNAMIGGFAQNGHGERAINLFNRMVREGPRPDYISFIGVLFA 454
>gi|125597837|gb|EAZ37617.1| hypothetical protein OsJ_21952 [Oryza sativa Japonica Group]
Length = 615
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R+ T +AM+ G A+NG + LF + + GPRP+ ++F+GVL A
Sbjct: 408 RNTITWNAMIGGFAQNGHGERAINLFNRMVREGPRPDYISFIGVLFA 454
>gi|125556039|gb|EAZ01645.1| hypothetical protein OsI_23682 [Oryza sativa Indica Group]
Length = 615
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R+ T +AM+ G A+NG + LF + + GPRP+ ++F+GVL A
Sbjct: 408 RNTITWNAMIGGFAQNGHGERAINLFNRMVREGPRPDYISFIGVLFA 454
>gi|115468918|ref|NP_001058058.1| Os06g0611200 [Oryza sativa Japonica Group]
gi|113596098|dbj|BAF19972.1| Os06g0611200 [Oryza sativa Japonica Group]
Length = 615
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R+ T +AM+ G A+NG + LF + + GPRP+ ++F+GVL A
Sbjct: 408 RNTITWNAMIGGFAQNGHGERAINLFNRMVREGPRPDYISFIGVLFA 454
>gi|46805412|dbj|BAD16914.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215704291|dbj|BAG93131.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 527
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R + ++M++G A NG+ VE F ++ + G +P+AVTF GVLTA
Sbjct: 297 MRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPDAVTFTGVLTA 346
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 34/61 (55%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP D + +A++ G KNG++ ++ F ++ G P+ VT + V++A ++ G+
Sbjct: 196 MPAPDKVSWTALIDGCVKNGRHDEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLG 255
Query: 62 L 62
+
Sbjct: 256 M 256
>gi|125541284|gb|EAY87679.1| hypothetical protein OsI_09093 [Oryza sativa Indica Group]
Length = 493
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R + ++M++G A NG+ VE F ++ + G +P+AVTF GVLTA
Sbjct: 263 MRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPDAVTFTGVLTA 312
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 33/61 (54%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP D + +A++ G KNG++ + F ++ G P+ VT + V++A ++ G+
Sbjct: 162 MPAPDKVSWTALIDGCVKNGRHDEAINCFRAMLLDGVEPDYVTLIAVISACAEVGALGLG 221
Query: 62 L 62
+
Sbjct: 222 M 222
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ + S+M++G A +G+ ++LF + + G +PN VTFVGVLTA
Sbjct: 305 MRERNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTA 354
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
+P +D T +AM+ G A+N +E+F + G + VT VGV++A ++
Sbjct: 202 LPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVISACAQL 255
>gi|255549842|ref|XP_002515972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544877|gb|EEF46392.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+MP RD + S+++ G KNG G + +F + GP+PN VT V VL A
Sbjct: 205 LMPDRDVLSWSSLIDGYVKNGDYGDAMVVFDKMRVSGPKPNEVTMVSVLCA 255
>gi|115474919|ref|NP_001061056.1| Os08g0162200 [Oryza sativa Japonica Group]
gi|28564637|dbj|BAC57819.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623025|dbj|BAF22970.1| Os08g0162200 [Oryza sativa Japonica Group]
gi|125602282|gb|EAZ41607.1| hypothetical protein OsJ_26139 [Oryza sativa Japonica Group]
gi|215741371|dbj|BAG97866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 535
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAY 52
RD + SA+++G NGK V LF + PNAVTFVG+L+AY
Sbjct: 353 RDVVSYSAIIVGCGMNGKFNEAVSLFKEMSDAKISPNAVTFVGLLSAY 400
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP R + ++M+ G A++G + ++LF + G +PN VTFVGVL+A +
Sbjct: 439 MPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSA--------CS 490
Query: 62 LMGIQPQNLWYY 73
G+ + L+Y+
Sbjct: 491 HAGLADEALYYF 502
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP R + ++M+ G A++G + ++LF + G +PN VTFVGVL+A +
Sbjct: 433 MPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSA--------CS 484
Query: 62 LMGIQPQNLWYY 73
G+ + L+Y+
Sbjct: 485 HAGLADEALYYF 496
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T SAM+ GLA NG +E F ++ G +PN+VT++ +LTA
Sbjct: 431 MSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTA 480
>gi|357144887|ref|XP_003573448.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Brachypodium distachyon]
Length = 530
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAY 52
RD + SAM++G NGK + LF + PNAVTFVG+L+AY
Sbjct: 348 RDVVSYSAMIVGCGMNGKLSEAIGLFKEMSDAKIVPNAVTFVGLLSAY 395
>gi|326492712|dbj|BAJ90212.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506700|dbj|BAJ91391.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 520
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 11 SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
+AMMLGLA +G+ + LF +E G RP+ VTF+ +L AYG
Sbjct: 336 NAMMLGLAAHGQCQEALALFSELESYGLRPDNVTFIAMLMAYG 378
>gi|242032157|ref|XP_002463473.1| hypothetical protein SORBIDRAFT_01g000443 [Sorghum bicolor]
gi|241917327|gb|EER90471.1| hypothetical protein SORBIDRAFT_01g000443 [Sorghum bicolor]
Length = 438
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ + +AM+ GLA NG + L ++ G RPN +TF+G+L+A
Sbjct: 294 MPVRNVYSWNAMIAGLAMNGGERQALSLLWKMQMAGVRPNDITFIGLLSA 343
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKI--FG 59
MP R+A T S+M+ GL +G+ G + +F + + G PN V V++A +++ +G
Sbjct: 192 MPQRNAATWSSMLTGLVLSGRCGEALRVFHDMVRSGAVPNEPALVSVVSACAQLRSLEYG 251
Query: 60 VTLMGIQPQNL 70
+ G Q L
Sbjct: 252 AWVHGYAEQEL 262
>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 1131
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTS-SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R++ S ++M++GLAKNG +E+F +E++ P+ VTF+GVL+A
Sbjct: 775 MPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSA 825
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P RD+ T +A++ G +K G N + LF +++ G RP TF +LTA
Sbjct: 259 IPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTA 308
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D+ + SAM++G A NG + +ELF ++ G +P+ VTFVGVL+A
Sbjct: 449 MRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSA 498
>gi|414879360|tpg|DAA56491.1| TPA: hypothetical protein ZEAMMB73_164599 [Zea mays]
Length = 520
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R T +A+++G A+NG+ +E++ + + G RP+ VTF+G+L A
Sbjct: 209 MPARCTITWTALIVGYAQNGRGRQSLEVYADMVRSGCRPDYVTFIGLLFA 258
>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Brachypodium distachyon]
Length = 642
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + S M+ GLA+NG++ +++F ++ GP PN +T VGVL A
Sbjct: 331 MHDRDVISWSTMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFA 380
>gi|222623741|gb|EEE57873.1| hypothetical protein OsJ_08529 [Oryza sativa Japonica Group]
Length = 500
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R + ++M++G A NG+ VE F ++ + G +P+AVTF GVLTA
Sbjct: 278 MRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPDAVTFTGVLTA 327
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP +D T S+M++GLA +G + LF + G +PN VTF+GVL +
Sbjct: 264 MPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLIS 313
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 8 TTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
T +AM++GLA++G+ ++LF +E G +P+ VTF+GVL+A
Sbjct: 692 TAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSA 735
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD + M+ G AK G +ELF + P+PN VTF+G+LTA
Sbjct: 227 RDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTA 273
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD + M+ G AK G +ELF + P+PN VTF+G+LTA
Sbjct: 227 RDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTA 273
>gi|226530385|ref|NP_001145846.1| CRR4 [Zea mays]
gi|219884683|gb|ACL52716.1| unknown [Zea mays]
gi|414878658|tpg|DAA55789.1| TPA: CRR4 [Zea mays]
Length = 601
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP RD S M+ G + NG+ +ELF ++ +PN VT VGVL+A ++
Sbjct: 270 MPRRDVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQL 323
>gi|195651407|gb|ACG45171.1| CRR4 [Zea mays]
Length = 601
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP RD S M+ G + NG+ +ELF ++ +PN VT VGVL+A ++
Sbjct: 270 MPRRDVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQL 323
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ T +AM+LG A+NG+ + L+ +++ +P+ +TFVGVL+A
Sbjct: 383 MPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSA 432
>gi|297846530|ref|XP_002891146.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336988|gb|EFH67405.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 554
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + ++++ GLA NG +G ++L+ +E G R + +TFV VLTA
Sbjct: 324 MKERDTASWTSLIYGLATNGMSGRALDLYYEMENVGVRLDDITFVAVLTA 373
>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M +D + +++++GLA NG + LF ++ G RPN VTF+GVL A K+
Sbjct: 846 MKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEG 905
Query: 62 LMGIQPQNLWYYIDGQI 78
L + Y ++ Q+
Sbjct: 906 LDHFESMKRLYSLEPQM 922
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M+ R+ + ++++ G A +G + VELF + + G RPN +TF+ VL A
Sbjct: 282 MLDRRNLVSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHA 332
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M +D + +++++GLA NG + LF ++ G RPN VTF+GVL A K+
Sbjct: 381 MKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEG 440
Query: 62 LMGIQPQNLWYYIDGQI 78
L + Y ++ Q+
Sbjct: 441 LDHFESMKRLYSLEPQM 457
>gi|242055215|ref|XP_002456753.1| hypothetical protein SORBIDRAFT_03g041980 [Sorghum bicolor]
gi|241928728|gb|EES01873.1| hypothetical protein SORBIDRAFT_03g041980 [Sorghum bicolor]
Length = 521
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R T +A+++G A+NG+ +E++ + + G RP+ VTF+G+L A
Sbjct: 210 MPARCTITWTALIVGYAQNGRGRRSLEVYTDMVRSGCRPDYVTFIGLLFA 259
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF--MSIEKRGPRPNAVTFVGVLTA 51
MP ++ + +AM+ LA +GK + LF MS E G RPN +TFVG+L+A
Sbjct: 380 MPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSA 431
>gi|255562790|ref|XP_002522400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538285|gb|EEF39892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 476
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D + +AM+LG +G+ V LF +EK G PN VTF+GVL+A
Sbjct: 391 MESKDVKSWTAMILGYGVHGQARNAVALFYRMEKEGFIPNEVTFLGVLSA 440
>gi|356546500|ref|XP_003541664.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g26900, mitochondrial-like [Glycine max]
Length = 470
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D + +AM+ GL +G+ + LF +EK G RPN VTF+ +LTA
Sbjct: 299 MEDKDVKSWTAMISGLGVHGQPNNVIRLFNRMEKEGFRPNEVTFLAILTA 348
>gi|356501900|ref|XP_003519761.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g62890-like [Glycine max]
Length = 567
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 29/49 (59%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
P +D SAM+ A +G + +ELF + G RPNAVTFVGVL A
Sbjct: 239 PEKDVMAWSAMITAFAMHGLSEECLELFARMVNDGVRPNAVTFVGVLCA 287
>gi|302769746|ref|XP_002968292.1| hypothetical protein SELMODRAFT_89176 [Selaginella moellendorffii]
gi|300163936|gb|EFJ30546.1| hypothetical protein SELMODRAFT_89176 [Selaginella moellendorffii]
Length = 453
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP DA + S ++ A+NG +GVELF ++ G P A+TF+ VL+ + +
Sbjct: 297 MPDPDAISWSTLIQTFAQNGHGDLGVELFGAMILEGVVPTAITFISVLSGFNHV 350
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ T +A++ G+A NG++ +ELF S+ + P VTF+GVL A
Sbjct: 434 MPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLA 483
>gi|222640787|gb|EEE68919.1| hypothetical protein OsJ_27783 [Oryza sativa Japonica Group]
Length = 604
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + M++G NG+ G + LF S+E+ G PN VTF+ VL A
Sbjct: 374 MQERDVKAWTVMIMGFGVNGQAGEVISLFRSMEEDGVVPNEVTFLAVLNA 423
>gi|147859671|emb|CAN83112.1| hypothetical protein VITISV_026574 [Vitis vinifera]
Length = 833
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLT 50
+MP RDAT + ++ GL +N G++ F+ +++ GP P+ TF VLT
Sbjct: 499 LMPARDATAWNVIIWGLGENDHGEEGLKFFVKMKEGGPFPDEATFTSVLT 548
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M D + ++++ GLA NG +E+F + +PN +TFVGVL+A
Sbjct: 601 MTSHDVISWNSIICGLAHNGNGVEAIEMFEKMRSTDIKPNRITFVGVLSA 650
>gi|359477774|ref|XP_002282129.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 691
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLT 50
+MP RDAT + ++ GL +N G++ F+ +++ GP P+ TF VLT
Sbjct: 345 LMPARDATAWNVIIWGLGENDHGEEGLKFFVKMKEGGPFPDEATFTSVLT 394
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M D + ++++ GLA NG +E+F + +PN +TFVGVL+A
Sbjct: 447 MRSHDFISWNSIICGLAHNGNGVEAIEVFEKMRSIDIKPNHITFVGVLSA 496
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D T+ ++++ GLA NGK +ELF +++ G +P+ +TFV VL+A
Sbjct: 405 KDTTSWTSIICGLAMNGKPSEALELFKAMQTCGLKPDDITFVAVLSA 451
>gi|302773103|ref|XP_002969969.1| hypothetical protein SELMODRAFT_92492 [Selaginella
moellendorffii]
gi|300162480|gb|EFJ29093.1| hypothetical protein SELMODRAFT_92492 [Selaginella
moellendorffii]
Length = 331
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELF--MSIEKRGPRPNAVTFVGVLTAYGKIKI--- 57
P RD ++M+ A+NG+ M +++F M RPNA+TFV VL A ++
Sbjct: 19 PDRDVALWNSMIAAYAQNGQGEMSLQVFERMKEATNNARPNAITFVHVLCACSHARLIER 78
Query: 58 ----FGV--TLMGIQPQNLWY 72
FG T+ GIQP + Y
Sbjct: 79 GRSYFGSMETVFGIQPSSQHY 99
>gi|224107245|ref|XP_002314420.1| predicted protein [Populus trichocarpa]
gi|222863460|gb|EEF00591.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + S M+ G ++ + GM +ELF + G RPN VT V V +A
Sbjct: 285 MPERDVFSWSTMISGYTQSDQPGMALELFHRMVTSGIRPNEVTMVSVFSA 334
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF--MSIEKRGPRPNAVTFVGVLTA 51
MP ++ + +AM+ LA +GK + LF MS E G RPN +TFVG+L+A
Sbjct: 386 MPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSA 437
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+M RD +AM++G +NG+N +ELF S+ GP PN+ T VL+A
Sbjct: 573 IMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSA 623
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGV 60
MP RDA + + M++GL ++G+ V+ F+ + G P+ T VL++ ++ GV
Sbjct: 307 MPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGV 365
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 31/47 (65%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
++ T ++M++ +A++G V LF + + G +P+ +T+VGVL+A
Sbjct: 679 KETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSA 725
>gi|115444423|ref|NP_001045991.1| Os02g0164600 [Oryza sativa Japonica Group]
gi|49388051|dbj|BAD25165.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|49388408|dbj|BAD25541.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535522|dbj|BAF07905.1| Os02g0164600 [Oryza sativa Japonica Group]
gi|125538213|gb|EAY84608.1| hypothetical protein OsI_05976 [Oryza sativa Indica Group]
gi|125580926|gb|EAZ21857.1| hypothetical protein OsJ_05503 [Oryza sativa Japonica Group]
gi|215737275|dbj|BAG96204.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 476
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+MP +D + +AM+ GLA +G V LF S+++ G P++ TFV VL+A
Sbjct: 283 LMPQKDLHSWTAMISGLASHGHGKEAVALFFSMKEAGVLPDSTTFVVVLSA 333
>gi|218201375|gb|EEC83802.1| hypothetical protein OsI_29727 [Oryza sativa Indica Group]
Length = 605
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + M++G NG+ G + LF S+E+ G PN VTF+ VL A
Sbjct: 374 MQERDVKAWTVMIMGFGVNGQAGEVISLFRSMEEDGVVPNEVTFLAVLNA 423
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP +D T +A++ G A+NG + + LF + + GP P+ VT + VL+A I
Sbjct: 290 MPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTI 343
>gi|224136906|ref|XP_002322445.1| predicted protein [Populus trichocarpa]
gi|222869441|gb|EEF06572.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+MP ++ T +AM+ GLA +G ++LF + + G RPN VTF+ LTA
Sbjct: 302 VMPHKNVLTWNAMLNGLAMHGHGQKALQLFEEMVREGMRPNEVTFLVTLTA 352
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P RD T ++M+ GLA++G+ LF +E+ G +P+ V FV +L A
Sbjct: 272 LPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRA 321
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 34/50 (68%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P ++ + ++M+ G A++G+ +ELF +++ G +P+ +TFVG L+A
Sbjct: 676 LPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSA 725
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + + ++ G ++GKN + + F +++ G +P+ +TF G+L A
Sbjct: 575 MPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNA 624
>gi|255540955|ref|XP_002511542.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550657|gb|EEF52144.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 434
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD SAM+ G A+NG++ +ELF + + +PN VT V VL+A
Sbjct: 289 MGQRDIVAWSAMIAGYAQNGRSNEALELFECMRREKVKPNDVTLVSVLSA 338
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P RD T ++M+ GLA++G+ LF +E+ G +P+ V FV +L A
Sbjct: 272 LPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRA 321
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 34/50 (68%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P ++ + ++M+ G A++G+ +ELF +++ G +P+ +TFVG L+A
Sbjct: 676 LPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSA 725
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + + ++ G ++GKN + + F +++ G +P+ +TF G+L A
Sbjct: 575 MPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNA 624
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLT 50
+M RD +AM++G +NG+N ++LF S+ GP PN+ T VL+
Sbjct: 284 VMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLS 333
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 31/47 (65%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
++ T ++M++ LA++G+ V LF + + G P+ +T+VGVL+A
Sbjct: 390 KETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSA 436
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP ++ + +AM+ G +++G V LF +++ G PN VTFVGVL+A
Sbjct: 678 MPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSA 727
Score = 37.7 bits (86), Expect = 1.00, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIF 58
+D+ + AM+ GL++NG+ + LF + K P F VL+A KI++F
Sbjct: 176 KDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELF 229
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLT 50
+M RD +AM++G +NG+N ++LF S+ GP PN+ T VL+
Sbjct: 390 VMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLS 439
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 31/47 (65%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
++ T ++M++ LA++G+ V LF + + G P+ +T+VGVL+A
Sbjct: 496 KETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSA 542
>gi|449475590|ref|XP_004154496.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 974
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTS-SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ S ++M++GLAKNG +E+F +E++ P+ VTF+GVL+A
Sbjct: 775 MPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSA 825
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLT 50
+M RD +AM++G +NG+N ++LF S+ GP PN+ T VL+
Sbjct: 390 VMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLS 439
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 31/47 (65%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
++ T ++M++ LA++G+ V LF + + G P+ +T+VGVL+A
Sbjct: 496 KETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSA 542
>gi|225216941|gb|ACN85235.1| EMB2261 putative [Oryza minuta]
Length = 612
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R+ T +AM+ G +NG + LF + + GPRP+ ++F+GVL A
Sbjct: 405 RNTITWNAMIGGFTQNGHGEQAINLFKRMVREGPRPDYISFIGVLFA 451
>gi|297843162|ref|XP_002889462.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335304|gb|EFH65721.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 608
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
M R+ T +AM+ LA+NG+ V F + K+G +P+ ++F+ VLTA G
Sbjct: 422 MSVRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAVLTACG 473
>gi|224063136|ref|XP_002301008.1| predicted protein [Populus trichocarpa]
gi|222842734|gb|EEE80281.1| predicted protein [Populus trichocarpa]
Length = 691
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA--YGKIKIFGVTL 62
RD + +++G A+NG+ +E+F + + G +PN VT++GVLTA + + + T+
Sbjct: 509 RDVVCWTGIIVGCAQNGRANEALEIFRQMVQSGLKPNEVTYLGVLTACRHAGLVVEAQTI 568
Query: 63 MG-------IQPQNLWYY 73
G ++PQ YY
Sbjct: 569 FGTMKCDHRLEPQLEHYY 586
>gi|255559100|ref|XP_002520572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540232|gb|EEF41805.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R++ T + M+LG ++G + LF S++K G +P+A+TFV VL+A
Sbjct: 471 RNSVTYTTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSA 517
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T +A++LGLA NG+ +++F + + P+ VTFVGVLTA
Sbjct: 354 MHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTA 403
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+A + +++++GLA NG +ELF +E +G P+ +TFVGVL A
Sbjct: 280 MSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYA 329
>gi|255542098|ref|XP_002512113.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549293|gb|EEF50782.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 336
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + M+ GLA +G + LF+ +E+ G +P+ VTF+ +L+A
Sbjct: 250 MPQRDTVCWNVMISGLAMHGDGEGAINLFLKMEEAGFKPDDVTFIAILSA 299
>gi|147791533|emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
Length = 768
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + + M+ GLA +GK +E F + K G PN VT + VL+A
Sbjct: 548 MPKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGXXPNEVTLLSVLSA 597
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + +AM++G A +G+ +ELF +E G +PN V F+ VLTA
Sbjct: 401 MRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTA 450
>gi|334186513|ref|NP_193153.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635637|sp|Q5XEY7.2|PP309_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14170
gi|332657989|gb|AEE83389.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 477
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + S+++LG +G M +LF + K G PNAVTF+GVL+A
Sbjct: 296 MSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSA 345
>gi|357142899|ref|XP_003572730.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Brachypodium distachyon]
Length = 497
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ + ++M+ GLA NG+ + LF ++ G +PN +TF+G+L A
Sbjct: 303 MPVRNIYSWNSMITGLAMNGREMQALSLFWKMQMAGVQPNDITFIGLLGA 352
>gi|326517559|dbj|BAK03698.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 529
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAY 52
+ RD + SAM++G NGK + LF + PNAV+FVG+L+AY
Sbjct: 344 LSKRDVVSYSAMIVGCGMNGKLNEAIGLFNEMSDANILPNAVSFVGLLSAY 394
>gi|302788636|ref|XP_002976087.1| hypothetical protein SELMODRAFT_72365 [Selaginella
moellendorffii]
gi|300156363|gb|EFJ22992.1| hypothetical protein SELMODRAFT_72365 [Selaginella
moellendorffii]
Length = 173
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP DA + S ++ A+NG +GVELF ++ G P A+TF+ VL+ + +
Sbjct: 23 MPDPDAISWSTLIQAFAQNGHGDLGVELFGAMILDGVVPTAITFISVLSGFNHV 76
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP ++ + +AM+ G +++G V LF +++ G PN VTFVGVL+A
Sbjct: 678 MPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSA 727
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGV 60
+D+ + AM+ G ++NG + LF + G P F VL+ KIK+F V
Sbjct: 176 KDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDV 231
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T +A++LGLA NG +E+F + + P+ VTF+GVLTA
Sbjct: 316 MHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTA 365
>gi|359479098|ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R + ++M++G A NG +E F + K G RP+ V+F G LTA
Sbjct: 285 MPKRSLVSWNSMIVGFALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTA 334
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M RDA + ++M+ G K G +E F ++ G P+ VT + VL A + G+
Sbjct: 184 MSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLAACANLGALGLG 243
Query: 62 L 62
L
Sbjct: 244 L 244
>gi|224126363|ref|XP_002329535.1| predicted protein [Populus trichocarpa]
gi|222870244|gb|EEF07375.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP + + ++M++G +G +E+F +EK GP PN TF+ VL+A
Sbjct: 413 MPEKSVVSWNSMIIGYGIHGHGDKALEMFREMEKGGPMPNDATFMSVLSA 462
>gi|53828565|gb|AAU94392.1| At4g14170 [Arabidopsis thaliana]
gi|55733761|gb|AAV59277.1| At4g14170 [Arabidopsis thaliana]
Length = 458
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + S+++LG +G M +LF + K G PNAVTF+GVL+A
Sbjct: 277 MSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSA 326
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ +AM+ G NG VELF + + G PN++TFV VL+A
Sbjct: 273 MKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPNSITFVAVLSA 322
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIF 58
M R T ++M+ G +NG + LF +++ G PN+ TFV VL+A + F
Sbjct: 172 MRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAF 228
>gi|2244773|emb|CAB10196.1| hypothetical protein [Arabidopsis thaliana]
gi|7268122|emb|CAB78459.1| hypothetical protein [Arabidopsis thaliana]
Length = 428
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + S+++LG +G M +LF + K G PNAVTF+GVL+A
Sbjct: 247 MSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSA 296
>gi|356515016|ref|XP_003526197.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g26900, mitochondrial-like [Glycine max]
Length = 439
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA--YGKIKIFG 59
M +D + +AM+ GL +G+ + LF +EK G +PN +TF+ +LTA +G + + G
Sbjct: 255 MEDKDVKSWTAMISGLGVHGQPNNAIRLFNRMEKEGFKPNELTFLAILTACSHGGLVVEG 314
Query: 60 VTLMGI 65
+ + I
Sbjct: 315 MXVFKI 320
>gi|326496937|dbj|BAJ98495.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 491
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP ++ + ++M+ GLA NG+ + LF ++ G RPN +TF+G+L A
Sbjct: 297 MPVKNIYSWNSMITGLAMNGREMQALSLFWKMQMAGVRPNDITFIGLLGA 346
>gi|125527494|gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indica Group]
Length = 608
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA---YGKIKIF 58
M RD S M+ G A+NG+ +ELF ++ +PN VT VGVL+A G ++
Sbjct: 277 MQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSDELG 336
Query: 59 GVTLMGIQPQNL 70
G ++ QNL
Sbjct: 337 GQIGSHVESQNL 348
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M + T ++MM GLA NG + L+ + + +PN +TFV +LTA
Sbjct: 378 MEHKVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTA 427
>gi|115439575|ref|NP_001044067.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|20160882|dbj|BAB89820.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113533598|dbj|BAF05981.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|125571815|gb|EAZ13330.1| hypothetical protein OsJ_03251 [Oryza sativa Japonica Group]
Length = 608
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA---YGKIKIF 58
M RD S M+ G A+NG+ +ELF ++ +PN VT VGVL+A G ++
Sbjct: 277 MQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSDELG 336
Query: 59 GVTLMGIQPQNL 70
G ++ QNL
Sbjct: 337 GQIGSHVESQNL 348
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M + T ++MM GLA NG + L+ + + +PN +TFV +LTA
Sbjct: 378 MEHKVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTA 427
>gi|296086445|emb|CBI32034.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF-MSIEKRGPRPNAVTFVGVLTA 51
MP RD T+ ++M+LG + +G+ +E F + PNA+TFVGVL+A
Sbjct: 278 MPKRDVTSWNSMILGFSTHGEVAAALEYFGCMVRTEKLMPNAITFVGVLSA 328
>gi|242056803|ref|XP_002457547.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
gi|241929522|gb|EES02667.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
Length = 762
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLT 50
MP RD+ T +AM++G ++ G++G +ELF ++ + G + TF +LT
Sbjct: 194 MPHRDSITYNAMIMGCSRQGRHGEALELFAAMRREGVDTSHFTFSSLLT 242
>gi|225424875|ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Vitis vinifera]
Length = 607
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF-MSIEKRGPRPNAVTFVGVLTA 51
MP RD T+ ++M+LG + +G+ +E F + PNA+TFVGVL+A
Sbjct: 292 MPKRDVTSWNSMILGFSTHGEVAAALEYFGCMVRTEKLMPNAITFVGVLSA 342
>gi|147833682|emb|CAN62088.1| hypothetical protein VITISV_030648 [Vitis vinifera]
Length = 583
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF-MSIEKRGPRPNAVTFVGVLTA 51
MP RD T+ ++M+LG + +G+ +E F + PNA+TFVGVL+A
Sbjct: 292 MPKRDVTSWNSMILGFSTHGEVAAALEYFGCMVRTEKLMPNAITFVGVLSA 342
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIF 58
MP +D + S M++G A NG F + + G RPN V+ GVL+A + F
Sbjct: 229 MPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAF 285
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R A + +AM+ G+A +G + LF +E+ +P+++TF+ +L A
Sbjct: 330 MLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISILYA 379
>gi|302823303|ref|XP_002993305.1| hypothetical protein SELMODRAFT_5521 [Selaginella moellendorffii]
gi|300138878|gb|EFJ05630.1| hypothetical protein SELMODRAFT_5521 [Selaginella moellendorffii]
Length = 194
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP ++ T +AM+ G A+NG GV L+ +++ G +PN +TFV L A I
Sbjct: 1 MPEKNVITWTAMIAGYAQNGHGKEGVALYRAMDLHGEQPNFITFVSALDACSLI 54
>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 641
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMS-IEKRGPRPNAVTFVGVLTAYGKIKI--F 58
MP RDA + +AM+ G+ G G LF+ + RG RPN T+ GVL A + + F
Sbjct: 228 MPVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAQFAVESF 287
Query: 59 GVTLMG 64
G + G
Sbjct: 288 GRQVHG 293
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R + +++++GLA NG ++LF +E++G +P+ +TFVGVL A
Sbjct: 298 MEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYA 347
>gi|449485419|ref|XP_004157162.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g25580-like [Cucumis sativus]
Length = 731
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ T+ M+ LAKNG ++LF +K G RP+ F+GV +A
Sbjct: 429 MPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKKAGLRPDGKMFIGVFSA 478
>gi|449449711|ref|XP_004142608.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g25580-like [Cucumis sativus]
Length = 671
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ T+ M+ LAKNG ++LF +K G RP+ F+GV +A
Sbjct: 369 MPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKKAGLRPDGKMFIGVFSA 418
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R + +++++GLA NG ++LF +E++G +P+ +TFVGVL A
Sbjct: 298 MEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYA 347
>gi|449443954|ref|XP_004139740.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 1441
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTS-SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ S ++M++GLAKNG +E+F +E++ P+ VTF+GVL+A
Sbjct: 775 MPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSA 825
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP ++ + +AM+ GLA +G +ELF +E G PN +TFV VL+A I
Sbjct: 350 MPRKNLCSWNAMLSGLAIHGHGFAALELFKQMESTGVGPNDITFVAVLSACSHI 403
>gi|225423493|ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 536
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD +AM+ G+A NG + LF +EK G +P+ +TF+ + TA
Sbjct: 298 MSQRDTICWNAMISGMAMNGDGDNALRLFSEMEKAGVKPDDITFIAIFTA 347
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP D + +A++ G A+ GK ++LF + +G +PN VTF+GVL+A
Sbjct: 443 MPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSA 492
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+M R+ + S+M+LG A +G+ ++LF + K RPN VTF+G+L+A
Sbjct: 337 VMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSA 387
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
+P +D +AM+ G A+NG+ +E F ++ G + VT GV++A ++
Sbjct: 235 LPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQL 288
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+M R+ + S+M+LG A +G+ ++LF + K RPN VTF+G+L+A
Sbjct: 337 VMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSA 387
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
+P +D +AM+ G A+NG+ +E F ++ G + VT GV++A ++
Sbjct: 235 LPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQL 288
>gi|147852347|emb|CAN80116.1| hypothetical protein VITISV_032528 [Vitis vinifera]
Length = 505
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ T SAM+LGLA++G +ELF +++ PN VTF+GVL A
Sbjct: 281 MLERNVWTWSAMILGLAQHGFAKEALELFPKMKQSSISPNYVTFLGVLCA 330
>gi|147841473|emb|CAN62101.1| hypothetical protein VITISV_033310 [Vitis vinifera]
Length = 396
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
M RD SAM+ G A+NG++ +ELF ++ +PN VT V VL+A ++
Sbjct: 67 MARRDVVXWSAMIAGYAQNGRSNEALELFEXMKSAQIKPNDVTLVSVLSACAQL 120
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P RD T ++M++GLA NG + L+ +++ +PN +TFVG+LTA
Sbjct: 168 LPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLLTA 217
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLT 50
MP RD+ T +AMM+G +K G + ++LF ++ ++G TF VLT
Sbjct: 201 MPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLT 249
>gi|242066664|ref|XP_002454621.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
gi|241934452|gb|EES07597.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
Length = 496
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R + ++M++GLA NG +ELF + ++G +P+AVT GVLTA
Sbjct: 268 RTVVSWNSMIVGLAANGLCTEAIELFEEMRRQGFKPDAVTLTGVLTA 314
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ +AM+ G NG VELF + + G PN++TFV VL+A
Sbjct: 273 MKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSA 322
>gi|218192399|gb|EEC74826.1| hypothetical protein OsI_10663 [Oryza sativa Indica Group]
Length = 703
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMS-IEKRGPRPNAVTFVGVLTAYGKIKI--F 58
MP RDA + +AM+ G+ G G LF+ + RG RPN T+ GVL A + + F
Sbjct: 228 MPVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAEFAVESF 287
Query: 59 GVTLMG 64
G + G
Sbjct: 288 GRQVHG 293
>gi|302807780|ref|XP_002985584.1| hypothetical protein SELMODRAFT_122334 [Selaginella
moellendorffii]
gi|300146790|gb|EFJ13458.1| hypothetical protein SELMODRAFT_122334 [Selaginella
moellendorffii]
Length = 301
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP R+ + +AM+ A+ G + LF +++ G RP+ VTFV +L A G+ G+
Sbjct: 1 MPERNTVSWNAMICAFAREGDFARALGLFRAMDLEGARPDRVTFVAILDACGQSLAMGLG 60
Query: 62 L 62
+
Sbjct: 61 M 61
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD S+M+ A NG + +E+F +++ G PN+VTFV VL A
Sbjct: 108 RDVKAWSSMLAAFALNGHSHEALEIFHAMQLHGFTPNSVTFVSVLLA 154
>gi|255569325|ref|XP_002525630.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535066|gb|EEF36748.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 765
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD SAM+ GLA +G+ ++LF +++ RPNAVTF +L A
Sbjct: 430 RDVFVWSAMIAGLAMHGRGRAAIDLFFEMQETKVRPNAVTFTNLLCA 476
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGK 54
+D + ++M+ G G +ELF ++ RPN VT VGVL+A K
Sbjct: 196 KDVVSWNSMIKGFVLGGCPDKALELFQLMKAENVRPNDVTMVGVLSACAK 245
>gi|168008904|ref|XP_001757146.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691644|gb|EDQ78005.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + SAM+ GLA+NG LF+ +++ G PN T+V +LTA
Sbjct: 264 MLDRDVISWSAMIGGLAQNGCGHEAFSLFLKMQREGVIPNVTTYVSILTA 313
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFG 59
M R+ T +AM+ GLA++G LF+ + + G P+A+T++ +L A G
Sbjct: 365 MSVRNVFTWNAMIGGLAQHGCGQEAFSLFLRMRREGVVPDAITYMSILNASASTGALG 422
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMS-IEKRGPRPNAVTFVGVLTAYGKI 55
MP R+ T ++M+ G A+NG++ M +ELF I + P+ VT V V++A G +
Sbjct: 321 MPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHL 375
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + + ++ G A +G + L ++++ G P+ VTF+GVLTA
Sbjct: 423 MATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTA 472
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMS-IEKRGPRPNAVTFVGVLTAYGKI 55
MP R+ T ++M+ G A+NG++ M +ELF I + P+ VT V V++A G +
Sbjct: 353 MPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHL 407
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + + ++ G A +G + L ++++ G P+ VTF+GVLTA
Sbjct: 455 MATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTA 504
>gi|242043238|ref|XP_002459490.1| hypothetical protein SORBIDRAFT_02g005450 [Sorghum bicolor]
gi|241922867|gb|EER96011.1| hypothetical protein SORBIDRAFT_02g005450 [Sorghum bicolor]
Length = 395
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 10/77 (12%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEK-RGPRPNAVTFVGVLTA--YGKI--- 55
MP RD + +AM+L LA +G+ ++LF + + RPNA+TFV VL+A YG +
Sbjct: 80 MPERDLASWNAMVLALANHGRVRDSLDLFDRMTRVENVRPNAITFVAVLSACNYGGLVEE 139
Query: 56 --KIFG--VTLMGIQPQ 68
+ F V+ GI+P+
Sbjct: 140 GRRYFAAMVSEYGIRPR 156
>gi|357168001|ref|XP_003581434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Brachypodium distachyon]
Length = 757
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVTLMGI 65
D + S++++G A++G ++LF + G RPN VTFVGVLTA ++ G+
Sbjct: 512 DVFSWSSLIVGYAQSGYPRKALDLFARMRNLGVRPNHVTFVGVLTACSRV--------GL 563
Query: 66 QPQNLWYY 73
+ +YY
Sbjct: 564 VDEGCYYY 571
>gi|356506146|ref|XP_003521848.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
mitochondrial-like [Glycine max]
Length = 503
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R+ + ++ + G A NG +E F S+EK G RPN VTF+GVL+A
Sbjct: 323 RNLVSWTSTISGFAMNGMGREALESFESMEKTGLRPNHVTFLGVLSA 369
>gi|297830924|ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329184|gb|EFH59603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 824
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 32/47 (68%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R++ T + M+LG ++G + LF+S+++ G +P+A+ FV VL+A
Sbjct: 589 RNSVTYTTMILGYGQHGMGERAISLFLSMQELGIKPDAIAFVAVLSA 635
>gi|242046394|ref|XP_002461068.1| hypothetical protein SORBIDRAFT_02g040090 [Sorghum bicolor]
gi|241924445|gb|EER97589.1| hypothetical protein SORBIDRAFT_02g040090 [Sorghum bicolor]
Length = 484
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD +AM++G NG+ G + LF +E+ G PN VTF+ +LTA
Sbjct: 355 RDVKAWTAMIMGFGVNGQPGSTITLFYRMEEDGVFPNDVTFLALLTA 401
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M ++ T +AM+ GL +G+ +ELF ++K+ RPN +T +GVL+A
Sbjct: 354 MEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSA 403
>gi|413924390|gb|AFW64322.1| hypothetical protein ZEAMMB73_176484 [Zea mays]
Length = 496
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R + ++M++G A NG+ +ELF + ++G +P+AVT GVLTA
Sbjct: 268 RTVVSWNSMIVGFAANGRCTDAIELFEEMRRQGFKPDAVTLTGVLTA 314
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M ++ +AM+ G +G +ELF + GPRPN VTFV VL+A
Sbjct: 280 MEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSA 329
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGV 60
MP + ++M+ G +NG VELF ++ G +P++ TFV +L+A ++ G+
Sbjct: 179 MPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIGL 237
>gi|297738075|emb|CBI27276.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD +AM+ G+A NG + LF +EK G +P+ +TF+ + TA
Sbjct: 192 MSQRDTICWNAMISGMAMNGDGDNALRLFSEMEKAGVKPDDITFIAIFTA 241
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P RD + +A++ G A+ G + +E+F ++ G RPN VT+ +LTA
Sbjct: 213 LPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTA 262
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 13/83 (15%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF--MSIEKRGPRPNAVTFVGVLT--AYGKIKI 57
MP R A + +AM++G +K+G +ELF M EKR +P+AVT + VL+ ++GK++
Sbjct: 314 MPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKR-VKPDAVTLLAVLSGCSHGKMED 372
Query: 58 FGVTL--------MGIQPQNLWY 72
G+++ GI+P Y
Sbjct: 373 TGLSIYDGMVAGEYGIKPDTEHY 395
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T SAM+ GLA NG +E F +++ G +P +VT++ VLTA
Sbjct: 429 MGERDVHTWSAMIAGLAFNGMGMDALESFCQMKRDGFQPTSVTYIAVLTA 478
>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
Length = 635
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP D + +AM+ G A+NG+ + F + + G RP+ VTFVGVL+A
Sbjct: 324 MPKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSA 373
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + +AM+ ++G G LF+ + + G +PN T+ GVL A
Sbjct: 223 MPVRDVVSWTAMVERYFDARRDGEGFRLFVRMLRSGIQPNEFTYAGVLRA 272
>gi|15218851|ref|NP_171853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180299|sp|Q9LR69.1|PPR8_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g03540
gi|9280645|gb|AAF86514.1|AC002560_7 F21B7.16 [Arabidopsis thaliana]
gi|91805735|gb|ABE65596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189463|gb|AEE27584.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 609
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
M R+ T +AM+ LA+NG+ V F + K+G +P+ ++F+ +LTA G
Sbjct: 423 MSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACG 474
>gi|293333352|ref|NP_001168668.1| uncharacterized protein LOC100382456 [Zea mays]
gi|223950067|gb|ACN29117.1| unknown [Zea mays]
Length = 602
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P RD SAM+ G A NG+ V LF ++ +G RP+A+ F +LTA
Sbjct: 416 VPNRDLAIWSAMINGHACNGEGSEAVVLFNEMQSKGVRPDAIVFTHILTA 465
>gi|302820647|ref|XP_002991990.1| hypothetical protein SELMODRAFT_134559 [Selaginella
moellendorffii]
gi|300140232|gb|EFJ06958.1| hypothetical protein SELMODRAFT_134559 [Selaginella
moellendorffii]
Length = 96
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGK 54
MP R+ + +AM+ A+ G + LF +++ G RP+ VTFV +L A G+
Sbjct: 1 MPERNTVSWNAMICAFAREGDFARALGLFRAMDLEGARPDRVTFVAILDACGQ 53
>gi|356554965|ref|XP_003545811.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
mitochondrial-like [Glycine max]
Length = 517
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R+ + ++ + G A NG +E F S+EK G RPN VTF+GVL+A
Sbjct: 337 RNLVSWTSTISGFAMNGMGREALESFESMEKAGLRPNHVTFLGVLSA 383
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMS-IEKRGPRPNAVTFVGVLTAYGKI 55
MP RD + ++M+ G A+NG++ M +ELF I +P+ VT VL+A G I
Sbjct: 351 MPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHI 405
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + + ++ G A NG ++L +++E+ G P+ VT++GVLTA
Sbjct: 453 MGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTA 502
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMS-IEKRGPRPNAVTFVGVLTAYGKI 55
MP RD + ++M+ G A+NG++ M +ELF I +P+ VT VL+A G I
Sbjct: 351 MPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHI 405
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + + ++ G A NG ++L +++E+ G P+ VT++GVLTA
Sbjct: 453 MGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTA 502
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T +AM++GLA NG+ +++F ++ +P+ +T++GVL+A
Sbjct: 429 MDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSA 478
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T +AM++GLA NG+ +++F ++ +P+ +T++GVL+A
Sbjct: 429 MDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSA 478
>gi|449454143|ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
gi|449490933|ref|XP_004158752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
Length = 484
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M + + + ++LG A NGK ++LFM + K +PN TFV VLTA
Sbjct: 301 MTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTA 350
>gi|147799976|emb|CAN68263.1| hypothetical protein VITISV_010806 [Vitis vinifera]
Length = 445
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+M R+ + ++M+ GLA NG + LF ++ GP PNA+TF+ +LT
Sbjct: 336 LMSERNVNSWNSMIAGLALNGCGKEALXLFWKMQFVGPSPNAITFIALLTG 386
>gi|359491803|ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 550
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+M R+ + ++M+ GLA NG + LF ++ GP PNA+TF+ +LT
Sbjct: 334 LMSERNVNSWNSMIAGLALNGCGKEALALFWKMQFVGPSPNAITFIALLTG 384
>gi|359475492|ref|XP_002269319.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 532
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D + +AM++GLA NG+ + LF +++ RPN+ TF+GVL A
Sbjct: 217 MVSKDVVSFNAMIMGLAINGEGEEALRLFSKMQELSLRPNSGTFLGVLCA 266
>gi|125605648|gb|EAZ44684.1| hypothetical protein OsJ_29310 [Oryza sativa Japonica Group]
Length = 612
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M + + ++M++G +G++ +ELF+ +E+ GPRPN TF+ VL++
Sbjct: 380 MGEKSVPSWNSMIIGYGLHGQSEKALELFLEMERDGPRPNETTFICVLSS 429
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 34/50 (68%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P ++ + ++M+ G A++G+ +ELF +++ G +P+ +TFVG L+A
Sbjct: 670 LPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSA 719
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + + ++ G ++G+N + F +++ G +P+ +TF G+L A
Sbjct: 569 MPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNA 618
>gi|255572826|ref|XP_002527345.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533264|gb|EEF35017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R + + M+ GLA++G + ++LF + G RPN +TFVGVL A
Sbjct: 449 MSTRTLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQITFVGVLAA 498
>gi|115479089|ref|NP_001063138.1| Os09g0407800 [Oryza sativa Japonica Group]
gi|51091508|dbj|BAD36246.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|51091564|dbj|BAD36301.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113631371|dbj|BAF25052.1| Os09g0407800 [Oryza sativa Japonica Group]
gi|215740507|dbj|BAG97163.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 612
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M + + ++M++G +G++ +ELF+ +E+ GPRPN TF+ VL++
Sbjct: 380 MGEKSVPSWNSMIIGYGLHGQSEKALELFLEMERDGPRPNETTFICVLSS 429
>gi|359488917|ref|XP_002283393.2| PREDICTED: ATP-dependent zinc metalloprotease FTSH 6,
chloroplastic-like [Vitis vinifera]
Length = 1146
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ T SAM+LGLA++G +ELF +++ PN VTF+GVL A
Sbjct: 922 MLERNVWTWSAMILGLAQHGFAKEALELFPKMKQSSISPNYVTFLGVLCA 971
>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
Length = 795
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIF 58
+D + S+M+ A++G+ ++L M ++ G RPN VTFV VL A +K F
Sbjct: 283 KDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAF 336
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD + S+M+ G ++N + LF +E G +PN+VTFV + A
Sbjct: 384 RDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDA 430
>gi|255564351|ref|XP_002523172.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537579|gb|EEF39203.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 569
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D T +A++ GLA NG + + LF +E++G +PN TFV LT+
Sbjct: 383 MEYKDVFTWTAVIEGLANNGYGNVALNLFKQMEEQGIQPNEATFVSALTS 432
>gi|168004577|ref|XP_001754988.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694092|gb|EDQ80442.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 437
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+M RD + +A+++G + G+ ++ F S+++ G PN VTFVGVL A
Sbjct: 335 IMDERDVVSYTALIVGHVRQGRFQEALQTFSSMQRDGVLPNTVTFVGVLKA 385
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVL 49
M RD T + ++ G A+NG ELF ++ + G +P+ VT+V VL
Sbjct: 137 MKDRDVVTWNIIIAGAARNGYFDEAFELFEAMREAGLKPDKVTYVCVL 184
>gi|414887716|tpg|DAA63730.1| TPA: hypothetical protein ZEAMMB73_596066 [Zea mays]
Length = 552
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD +AM++G NG+ G V LF + + G PN VTF+ +LTA
Sbjct: 368 RDVKAWTAMVMGFGVNGQPGSAVSLFYRMMEDGVAPNGVTFLALLTA 414
>gi|302757781|ref|XP_002962314.1| hypothetical protein SELMODRAFT_76236 [Selaginella
moellendorffii]
gi|300170973|gb|EFJ37574.1| hypothetical protein SELMODRAFT_76236 [Selaginella
moellendorffii]
Length = 155
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP RD + +AM+ A NG + + +ELF+++ G P+ VTF VLTA +
Sbjct: 1 MPWRDLISWNAMIAVYALNGHHALSLELFLAMAMEGLEPSDVTFSSVLTACAHAGMIDRC 60
Query: 62 LMGIQPQNLWYYIDGQIDAWQAACQI 87
++ Y I+ ++ +A I
Sbjct: 61 SSCLESMRSDYSIEETLEHRRALVDI 86
>gi|255555213|ref|XP_002518643.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542024|gb|EEF43568.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 318
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D + +AM++GLA NG+ V+LF +++ G PN TF+G+L A
Sbjct: 217 MVSKDVVSFNAMIMGLAINGEGQEAVKLFSKVQELGLHPNGGTFLGLLWA 266
>gi|357142117|ref|XP_003572465.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 613
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP-RPNAVTFVGVLTA 51
RD + + M++G A NG +G ++LF +E+ G PN +TF+GVLT+
Sbjct: 395 RDDFSWTVMIMGFAVNGLSGEALDLFAQMEEEGEVMPNEITFLGVLTS 442
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P ++A T +AM+ GLA +G +E F + G +P+ +TF+GVL+A
Sbjct: 417 IPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSA 466
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP RD +A+M G +N + + LF +++ PN +T V +L+A ++ G
Sbjct: 316 MPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQL---GAL 372
Query: 62 LMGIQPQNLW--YYID 75
MG +W +YID
Sbjct: 373 EMG-----MWVHHYID 383
>gi|115440653|ref|NP_001044606.1| Os01g0814300 [Oryza sativa Japonica Group]
gi|20161481|dbj|BAB90405.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|56785052|dbj|BAD82691.1| PPR repeat containing protein-like [Oryza sativa Japonica Group]
gi|113534137|dbj|BAF06520.1| Os01g0814300 [Oryza sativa Japonica Group]
Length = 604
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD SAM++GLA +G + ++LF + + RPN VTF+GVL+A
Sbjct: 294 MAERDTKAWSAMIVGLAIHGLVEVALKLFSRMLELKVRPNNVTFIGVLSA 343
>gi|449452775|ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
gi|449493602|ref|XP_004159370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 548
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M + T S ++ LA +G G +++F+ +EK RPN VTFV +L+A + + V
Sbjct: 315 MKQKSVITWSTVIAALALHGLGGEAIDMFLRMEKAKVRPNEVTFVAILSACSHVGMVDVG 374
Query: 62 LMGIQPQNLWYYIDGQIDAWQAACQI 87
Y I+ +I+ + C I
Sbjct: 375 RYYFDQMQSMYKIEPKIEHY--GCMI 398
>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
Length = 766
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVTLMG 64
RD + S++++G A+ G ++LF + G +PN VTFVGVLTA ++ G
Sbjct: 518 RDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLTACSRV--------G 569
Query: 65 IQPQNLWYY 73
+ + +YY
Sbjct: 570 LVDEGCYYY 578
>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 776
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R T ++M+ G +++G++ ++LF + G RPN +TFV +L+A
Sbjct: 452 MPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSA 501
>gi|326515584|dbj|BAK07038.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 594
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R T ++M+ G +++G++ ++LF + G RPN +TFV +L+A
Sbjct: 270 MPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSA 319
>gi|225470997|ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
gi|297742795|emb|CBI35475.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + + M+ GLA +GK +E F + K G PN VT + VL+A
Sbjct: 297 MPKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGVVPNEVTLLSVLSA 346
>gi|242071929|ref|XP_002451241.1| hypothetical protein SORBIDRAFT_05g026370 [Sorghum bicolor]
gi|241937084|gb|EES10229.1| hypothetical protein SORBIDRAFT_05g026370 [Sorghum bicolor]
Length = 505
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVL 49
P R + +AM+ G + NG G++LF + + G PNAVTF+ VL
Sbjct: 312 PQRSVVSWNAMITGFSLNGHGVEGIDLFQKMMRHGVEPNAVTFLAVL 358
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIF 58
M R +AM+LGLA++G + LF +++ G +P+ VTF+GVL+A +F
Sbjct: 1261 MDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLF 1317
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIF 58
M R +AM+LGLA++G + LF +++ G +P+ VTF+GVL+A +F
Sbjct: 1261 MDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLF 1317
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLT 50
+M RD +AM++G +NG N +ELF + + GP PN+ T VL+
Sbjct: 388 VMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLS 437
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGV 60
MP RD + + M++GL + G+ G +++F+ + G P T VL++ + GV
Sbjct: 122 MPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGV 180
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
++ T ++M++ LA++G V LF + + G +P+ +TFVGVL+A
Sbjct: 494 KETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSA 540
>gi|224126329|ref|XP_002329527.1| predicted protein [Populus trichocarpa]
gi|222870236|gb|EEF07367.1| predicted protein [Populus trichocarpa]
Length = 377
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D T ++++ GLA NGK +ELF +++ P+ VTF+GVL+A
Sbjct: 153 KDTATWTSIICGLAMNGKTSKALELFSKMKQVEAIPDEVTFIGVLSA 199
>gi|326527617|dbj|BAK08083.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 642
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
M RD S M+ G A+NG+ +ELF ++ RPN VT VGV++A ++
Sbjct: 311 MSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQL 364
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M + T ++M+ GLA NG + L+ + + G +PN +TFV +L A
Sbjct: 412 MEQKGVITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNEITFVALLAA 461
>gi|326507322|dbj|BAJ95738.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 593
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
M RD S M+ G A+NG+ +ELF ++ RPN VT VGV++A ++
Sbjct: 262 MSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQL 315
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M + T ++M+ GLA NG + L+ + + G +PN +TFV +L A
Sbjct: 363 MEQKGVITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNEITFVALLAA 412
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
D +AM++G +NG N +E+F ++ GPRPN+ T +L+A +
Sbjct: 338 DVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSV 387
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD + ++M++ LA++G +ELF + G +P+ +T+VGVL+A
Sbjct: 439 RDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSA 485
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMS-IEKRGPRPNAVTFVGVLTAYGKI 55
MP R+ T ++M+ G A+NG++ M +ELF I + P+ VT V V++A G +
Sbjct: 195 MPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHL 249
Score = 37.7 bits (86), Expect = 0.91, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + + ++ G A +G + L ++++ G P+ VTF+GVLTA
Sbjct: 297 MATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTA 346
>gi|125528144|gb|EAY76258.1| hypothetical protein OsI_04193 [Oryza sativa Indica Group]
Length = 565
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD SAM++GLA +G + ++LF + + RPN VTF+GVL+A
Sbjct: 291 MAERDTKAWSAMIVGLAIHGLVEVALKLFSRMLELKVRPNNVTFIGVLSA 340
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 34/51 (66%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+MP R+ + ++M+ G A++G +++F +++ G P+ VTFVGVL+A
Sbjct: 821 LMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSA 871
>gi|242051158|ref|XP_002463323.1| hypothetical protein SORBIDRAFT_02g041810 [Sorghum bicolor]
gi|241926700|gb|EER99844.1| hypothetical protein SORBIDRAFT_02g041810 [Sorghum bicolor]
Length = 576
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLT---AYGKIKIFGVT 61
+D +AM+ G A+NG + + LF S+ + G RP+ +T VGVL+ A G +++ GV
Sbjct: 250 KDVVAWNAMITGYAQNGMSNEAIALFHSMREAGLRPDKITLVGVLSSCAAVGALEL-GVE 308
Query: 62 LMG 64
L G
Sbjct: 309 LDG 311
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF-MSIEKRGPRPNAVTFVGVLTA 51
MP ++ + +A++ GLA NG+ ++ F + ++G +P+ +TF+GVL+A
Sbjct: 348 MPFKNEASWNALICGLAFNGRGYDAIQQFELMRNEKGLQPDDITFIGVLSA 398
>gi|255564188|ref|XP_002523091.1| magnesium/proton exchanger, putative [Ricinus communis]
gi|223537653|gb|EEF39276.1| magnesium/proton exchanger, putative [Ricinus communis]
Length = 1015
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D SAM+ GLA +G G+ELF + +G RPN VTF+ VL A
Sbjct: 281 KDVMAWSAMISGLAMHGYGEEGLELFSKMVNQGLRPNNVTFLAVLYA 327
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD+ + + ++ G A NG+ G + +F+ ++K G +P T V VL A
Sbjct: 115 MPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNA 164
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ + ++M+ G A NG++ + L+ ++ + +P++VTFVGVL+A
Sbjct: 383 MQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSA 432
>gi|222631730|gb|EEE63862.1| hypothetical protein OsJ_18686 [Oryza sativa Japonica Group]
Length = 551
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP-RPNAVTFVGVLTA 51
M +D + S ++ GLA +G+ V LF +EK G RPN +TFVG+L+A
Sbjct: 312 MADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSA 362
>gi|125552488|gb|EAY98197.1| hypothetical protein OsI_20110 [Oryza sativa Indica Group]
Length = 551
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP-RPNAVTFVGVLTA 51
M +D + S ++ GLA +G+ V LF +EK G RPN +TFVG+L+A
Sbjct: 312 MADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSA 362
>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
Length = 766
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
RD + S++++G A+ G ++LF + G RPN VTF+GVLTA ++
Sbjct: 521 RDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRV 571
>gi|297724167|ref|NP_001174447.1| Os05g0439300 [Oryza sativa Japonica Group]
gi|46981301|gb|AAT07619.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|215769333|dbj|BAH01562.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676403|dbj|BAH93175.1| Os05g0439300 [Oryza sativa Japonica Group]
Length = 551
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP-RPNAVTFVGVLTA 51
M +D + S ++ GLA +G+ V LF +EK G RPN +TFVG+L+A
Sbjct: 312 MADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSA 362
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M R+ T +AM+ GLA +G+ +ELF +++ +PN +T VGVLTA
Sbjct: 355 MKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKG 414
Query: 62 LMGIQPQNLWYYIDGQIDAW 81
L Q +Y +D +++ +
Sbjct: 415 LRIFQTMREFYGVDPELEHY 434
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M R+ T +AM+ GLA +G+ +ELF +++ +PN +T VGVLTA
Sbjct: 355 MKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKG 414
Query: 62 LMGIQPQNLWYYIDGQIDAW 81
L Q +Y +D +++ +
Sbjct: 415 LRIFQTMREFYGVDPELEHY 434
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P RD T +AM++GLA NG + +F + K P+ VT+VGVL+A
Sbjct: 324 LPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSA 373
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M + + +++++GLA NG +ELF +E++G P+ +TFVGVL A
Sbjct: 302 MEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYA 351
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M + + +++++GLA NG +ELF +E++G P+ +TFVGVL A
Sbjct: 157 MEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYA 206
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP ++ + ++M+ G + GK ++LFM +E RPN VT V VL A
Sbjct: 102 MPNKNVRSWTSMISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAA 151
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R + SAM+ GLA +G+ + LF + K G +PN VTF+G+L A
Sbjct: 203 MEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHA 252
>gi|357141789|ref|XP_003572348.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Brachypodium distachyon]
Length = 555
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
++ + +A++ GLA NG +++F + + G +PN +TFVGVLTA
Sbjct: 374 KNVSAWNALITGLAVNGDVRSSIDVFEQMRRSGEKPNGITFVGVLTA 420
>gi|255578711|ref|XP_002530214.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530261|gb|EEF32161.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 834
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 34/50 (68%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ + ++M+ G A++G+ + ++LF ++ G P+ VTFVGVL+A
Sbjct: 617 MPLRNLYSWNSMISGYARHGRGDVALQLFTQMKLDGQLPDHVTFVGVLSA 666
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ + ++M+ G A+ GK+ ++LF+ +E G PN VT V VL A
Sbjct: 205 MPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVA 254
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R + SAM+ GLA +G+ + LF + G +PNAVTF+G+L A
Sbjct: 306 MEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHA 355
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ + ++M+ G A+ GK+ ++LF+ +E G PN VT V VL A
Sbjct: 205 MPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVA 254
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R + SAM+ GLA +G+ + LF + G +PNAVTF+G+L A
Sbjct: 306 MEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHA 355
>gi|225444117|ref|XP_002266487.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 553
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T + + GLA +G + LF +EK+G +PN TFV VL A
Sbjct: 367 MDSRDVFTWTTAIEGLANHGHGDKALSLFTEMEKQGIKPNQATFVSVLMA 416
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP-RPNAVTFVGVLTA 51
+MP R+ T+ +AM+ G A+NG+ + +F+ +E+ RPN VT VL A
Sbjct: 173 LMPARNVTSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLPA 224
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R+ + ++M++GLA +G+ +ELF + + G P+ VTFVGVL A
Sbjct: 280 RNLCSWNSMIMGLAVHGRCDEAIELFYKMLREGAAPDDVTFVGVLLA 326
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M + +T +A++LGLA NG + +F ++K G PN +TF+GVL A
Sbjct: 464 MEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGA 513
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T +AM+ GLA NG +E F +++ G +P +VT++ VLTA
Sbjct: 431 MGERDVHTWTAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTA 480
>gi|302755780|ref|XP_002961314.1| hypothetical protein SELMODRAFT_31776 [Selaginella moellendorffii]
gi|300172253|gb|EFJ38853.1| hypothetical protein SELMODRAFT_31776 [Selaginella moellendorffii]
Length = 484
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMG-VELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP D + + +++ A+ G + +ELF ++ G PNAVTFVG+LTA +I
Sbjct: 331 MPETDVVSWTTLVVAYAQAGHSAAASLELFHAMNLHGQLPNAVTFVGILTACSRI 385
>gi|224089599|ref|XP_002308772.1| predicted protein [Populus trichocarpa]
gi|222854748|gb|EEE92295.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P +++ T + M+L ++G + LF S++K G P+A+TF+ VL+A
Sbjct: 91 LPDKNSVTYTTMILAYGQHGMGERALSLFHSMKKSGIEPDAITFIAVLSA 140
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P ++A T +AM+ GLA +G + ++ F + + G +P+ +TF+GVL+A
Sbjct: 415 IPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSA 464
>gi|359487598|ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Vitis vinifera]
Length = 603
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVL 49
MP RD T ++M++G +G+ + F S+ G RPN++TF+G+L
Sbjct: 288 MPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLL 335
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M RD + +AM+ GL++NG +ELF + G +P+ +TFV VL+A +
Sbjct: 476 MLQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSA--------CS 527
Query: 62 LMGIQPQNLWYYIDGQIDAW 81
MGI + W Y + D +
Sbjct: 528 HMGIVKRG-WAYFNMMFDEF 546
>gi|296089864|emb|CBI39683.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVL 49
MP RD T ++M++G +G+ + F S+ G RPN++TF+G+L
Sbjct: 270 MPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLL 317
>gi|147838430|emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera]
Length = 978
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVL 49
MP RD T ++M++G +G+ + F S+ G RPN++TF+G+L
Sbjct: 663 MPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLL 710
>gi|147767785|emb|CAN66974.1| hypothetical protein VITISV_022076 [Vitis vinifera]
Length = 967
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP-RPNAVTFVGVLTA 51
+MP R+ T+ +AM+ G A+NG+ + +F+ +E+ RPN VT VL A
Sbjct: 658 LMPARNVTSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLPA 709
>gi|255575334|ref|XP_002528570.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532014|gb|EEF33825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 542
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 33/51 (64%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+MP R+ + +A+M G A +G+ + +F +++ G +P+ V+F+ VL+A
Sbjct: 435 IMPTRNLVSWNALMAGYAMHGQTKEAISIFQRMQRSGQKPDFVSFISVLSA 485
>gi|255578133|ref|XP_002529936.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530566|gb|EEF32444.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 548
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP R+ TT M+ LAKNG ++LF ++ G P+A F+GV +A G +
Sbjct: 294 MPKRNLTTWDTMIAWLAKNGLGEDAIDLFSQFKQAGLVPDAQLFIGVFSACGVV 347
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAY 52
M RD TT S M+ G A +G + ++LF ++++ PN VTF VL+AY
Sbjct: 229 MAERDVTTWSIMIAGYAIHGHDEKALQLFDAMKRSKIIPNCVTFTSVLSAY 279
>gi|255562657|ref|XP_002522334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538412|gb|EEF40018.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 507
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP D + ++++ G A+NG ++ F + K G RP+ +TFVGVL+A G+
Sbjct: 375 MPQPDLVSWTSLIAGYAQNGHPDEALQYFELLLKSGTRPDHITFVGVLSACAHA---GLV 431
Query: 62 LMGIQPQNLWYYIDGQIDAWQAA 84
G+Q ++ I ++ W+ A
Sbjct: 432 DKGLQ---YFHSIMDKLTGWKGA 451
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGV 60
M RD T +AM+ ++G+ G ELF + + G +PN TF GVL A + + G+
Sbjct: 274 MVNRDVVTWTAMIDRYFEDGRREEGFELFAELLRSGIKPNDFTFAGVLNACADLGVEGI 332
>gi|302808794|ref|XP_002986091.1| hypothetical protein SELMODRAFT_182148 [Selaginella moellendorffii]
gi|300146239|gb|EFJ12910.1| hypothetical protein SELMODRAFT_182148 [Selaginella moellendorffii]
Length = 604
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+ RD SA++ A++G + ++LF +++ G RPN VTFVGVL A
Sbjct: 296 LAERDVVVWSAILEAYARHGHPRVALKLFTLMQQEGVRPNDVTFVGVLEA 345
>gi|224126745|ref|XP_002319916.1| predicted protein [Populus trichocarpa]
gi|222858292|gb|EEE95839.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ T ++M+ G A+NG+ G +LF + + G RP+ ++FVGVL A
Sbjct: 422 MSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIRPDYISFVGVLFA 471
>gi|413925246|gb|AFW65178.1| hypothetical protein ZEAMMB73_703358 [Zea mays]
Length = 572
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP +D + + M+ G A+ G++ +ELF +++ RPN VT V V +A ++
Sbjct: 281 MPEKDVVSWTCMVSGYARAGRHAQALELFRTMQSGDVRPNEVTMVSVFSACARL 334
>gi|357143748|ref|XP_003573036.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Brachypodium distachyon]
Length = 484
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R + ++M++G A NG+ VE F ++ + G +P+ VTF GVLTA
Sbjct: 267 RTVVSWNSMIVGFAANGQYADAVEHFEAMRREGFKPDTVTFTGVLTA 313
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 34/61 (55%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP D + +A++ G KNG++ ++ F S+ + G P+ VT V ++A ++ G+
Sbjct: 163 MPAPDKVSWTALIDGCVKNGRHDEAIDCFHSMLRDGVEPDYVTLVAAISACAEVGALGLG 222
Query: 62 L 62
+
Sbjct: 223 M 223
>gi|357119334|ref|XP_003561397.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Brachypodium distachyon]
Length = 635
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 27/50 (54%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD +AM+ GLA +G VELF G P +TFVGVL A
Sbjct: 324 MPRRDVFAWNAMICGLASHGLGQDAVELFWRFLDEGLWPTDITFVGVLNA 373
>gi|302800503|ref|XP_002982009.1| hypothetical protein SELMODRAFT_115259 [Selaginella moellendorffii]
gi|300150451|gb|EFJ17102.1| hypothetical protein SELMODRAFT_115259 [Selaginella moellendorffii]
Length = 604
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD SA++ A++G + ++LF +++ G RPN VTFVGVL A
Sbjct: 299 RDVVVWSAILEAYARHGHPRVALKLFTLMQQEGVRPNDVTFVGVLEA 345
>gi|224577089|gb|ACN57218.1| At1g59720-like protein [Capsella grandiflora]
Length = 180
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP--RPNAVTFVGVLTA 51
MP RD + +AM+LG A +G+ ++ F + K+G +PN+VTFV +L A
Sbjct: 75 MPKRDLASWNAMILGFATHGRAKEAMDCFDRMVKKGENIKPNSVTFVALLIA 126
>gi|41052951|dbj|BAD07861.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 312
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M ++A T SAM+ GLA +G +E+F ++ + G RP+A +VGVL A
Sbjct: 1 MDDKNAWTYSAMVSGLALHGDGRKALEVFDAMVREGHRPDAAVYVGVLNA 50
>gi|224577095|gb|ACN57221.1| At1g59720-like protein [Capsella grandiflora]
Length = 180
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP--RPNAVTFVGVLTA 51
MP RD + +AM+LG A +G+ ++ F + K+G +PN+VTFV +L A
Sbjct: 75 MPKRDLASWNAMILGFATHGRAKEAMDCFDRMVKKGENXKPNSVTFVALLIA 126
>gi|224056823|ref|XP_002299041.1| predicted protein [Populus trichocarpa]
gi|222846299|gb|EEE83846.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M D T +AM+ GLA NG + +F +E +G RPN T V VLTA
Sbjct: 374 MEYTDVFTWTAMIEGLANNGYGNEALSMFNRMENQGIRPNESTLVSVLTA 423
>gi|125583346|gb|EAZ24277.1| hypothetical protein OsJ_08028 [Oryza sativa Japonica Group]
Length = 613
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M ++A T SAM+ GLA +G +E+F ++ + G RP+A +VGVL A
Sbjct: 302 MDDKNAWTYSAMVSGLALHGDGRKALEVFDAMVREGHRPDAAVYVGVLNA 351
>gi|125540774|gb|EAY87169.1| hypothetical protein OsI_08570 [Oryza sativa Indica Group]
Length = 613
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M ++A T SAM+ GLA +G +E+F ++ + G RP+A +VGVL A
Sbjct: 302 MDDKNAWTYSAMVSGLALHGDGRKALEVFDAMVREGHRPDAAVYVGVLNA 351
>gi|449486568|ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Cucumis sativus]
Length = 532
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD +AM+ G+A +G ++LFM +EK G +P+ +TF+ V A
Sbjct: 298 MSQRDNVCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVWXA 347
>gi|297745510|emb|CBI40590.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP-RPNAVTFVGVLTA 51
+MP R+ T+ +AM+ G A+NG+ + +F+ +E+ RPN VT VL A
Sbjct: 173 LMPARNVTSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLPA 224
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R+ + ++M++GLA +G+ +ELF + + G P+ VTFVGVL A
Sbjct: 280 RNLCSWNSMIMGLAVHGRCDEAIELFYKMLREGAAPDDVTFVGVLLA 326
>gi|225217042|gb|ACN85326.1| EMB2261 putative [Oryza brachyantha]
Length = 626
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R+ T +AM+ G A+NG + LF + + GPRP+ ++FV VL A
Sbjct: 406 RNTITWNAMIGGFAQNGHGERAINLFDRMVREGPRPDYISFVSVLFA 452
>gi|356529553|ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 540
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP +DA+ + M+ A +G F+ +EK G +PN VTFVG+L+A
Sbjct: 322 MPEKDASAWTVMISVFALHGLGWKAFNCFLEMEKAGVKPNHVTFVGLLSA 371
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP +D + S M++G A NG F ++++G RPN + GVL+A
Sbjct: 229 MPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSA 278
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + +AM++G A+NG +E+F + G RP+ VT +GVL+A
Sbjct: 452 MLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSA 501
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP ++ T +A++ GLA +G +ELF + + G RPN VTF+ +LTA
Sbjct: 294 MPHKNVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTA 343
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 1430
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
P RD ++M+ G A +GK G++LF ++K+G + ++VTF+G L +
Sbjct: 548 PSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVS 596
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
M RD + +AM++G A+NG+ + LF + P++VT +GVL+A G
Sbjct: 1193 MAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACG 1244
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MM R TT +AM+ G +G +ELF ++K RPN VTF+ V++A
Sbjct: 498 MMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISA 548
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKI 57
R + +AM+LG A+NG+ + F ++ R +P+ T+V V+TA ++ I
Sbjct: 401 RTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSI 453
>gi|413920230|gb|AFW60162.1| hypothetical protein ZEAMMB73_962137 [Zea mays]
Length = 516
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 4 PRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVL 49
PR + + ++ G + NG+ G++LF + ++G PNAVTF+ VL
Sbjct: 330 PRSVVSWNTLIAGFSLNGRGVEGIDLFQEMRRQGMEPNAVTFLAVL 375
>gi|413925923|gb|AFW65855.1| hypothetical protein ZEAMMB73_620530 [Zea mays]
Length = 501
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T +AM+ GLA NG +E F +++ G +P +VT++ VLTA
Sbjct: 431 MGERDVHTWTAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTA 480
>gi|255558478|ref|XP_002520264.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540483|gb|EEF42050.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 524
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA--YGKIKIFG 59
M RD + + M++GL +NG+ ++ F + RGP P+ +T GVL A YG G
Sbjct: 301 MTVRDLISWNTMIMGLTQNGRVIEALDAFKKLLNRGPPPDRITLAGVLLACSYGGFIEEG 360
Query: 60 VTLM-------GIQPQNLWY 72
+T+ GI P N Y
Sbjct: 361 MTIFSSMQGSYGIIPSNEHY 380
>gi|147825156|emb|CAN75501.1| hypothetical protein VITISV_034156 [Vitis vinifera]
Length = 532
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + S+M+ G K G+ G+ + +F + GP+ N VT V VL A
Sbjct: 197 MPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRVVGPKANXVTMVSVLCA 246
>gi|125528323|gb|EAY76437.1| hypothetical protein OsI_04370 [Oryza sativa Indica Group]
Length = 456
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGV 60
MP R+ + +AM+ G +K G N V LF+ + + G RPN TF +LT+ GV
Sbjct: 133 MPERNVISWNAMIGGSSKAGLNEEAVNLFLEMCREGVRPNESTFPCLLTSVANAGALGV 191
>gi|115440947|ref|NP_001044753.1| Os01g0839400 [Oryza sativa Japonica Group]
gi|15623829|dbj|BAB67888.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|21104616|dbj|BAB93208.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113534284|dbj|BAF06667.1| Os01g0839400 [Oryza sativa Japonica Group]
gi|125572581|gb|EAZ14096.1| hypothetical protein OsJ_04019 [Oryza sativa Japonica Group]
Length = 456
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGV 60
MP R+ + +AM+ G +K G N V LF+ + + G RPN TF +LT+ GV
Sbjct: 133 MPERNVISWNAMIGGSSKAGLNEEAVNLFLEMCREGVRPNESTFPCLLTSVANAGALGV 191
>gi|222636196|gb|EEE66328.1| hypothetical protein OsJ_22569 [Oryza sativa Japonica Group]
Length = 1287
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD +AM+ GLA NG G+E F + G +PN V+++ VLTA
Sbjct: 372 MGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIAVLTA 421
>gi|218198855|gb|EEC81282.1| hypothetical protein OsI_24392 [Oryza sativa Indica Group]
Length = 1349
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD +AM+ GLA NG G+E F + G +PN V+++ VLTA
Sbjct: 434 MGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIAVLTA 483
>gi|218198581|gb|EEC81008.1| hypothetical protein OsI_23770 [Oryza sativa Indica Group]
Length = 275
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP R +AM+ G A+ G VE+F S+ G RP+ TF VL A ++
Sbjct: 88 MPQRSVVAWNAMISGCARGGAEARAVEMFGSMRAEGMRPDQFTFASVLCACARL 141
>gi|357139833|ref|XP_003571481.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Brachypodium distachyon]
Length = 617
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD +AM+ G A +G +ELF ++ +G PN +TFV VLTA
Sbjct: 306 MRIRDVIAWNAMISGYAHHGDGREAIELFEKMKSQGVEPNWITFVAVLTA 355
>gi|326491225|dbj|BAK05712.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T ++M+ GLA +G+ + LF + + RPN VTF+GVL+A
Sbjct: 333 MTRRDVYTYTSMISGLAMHGRGEEALALFGDMRQARVRPNEVTFLGVLSA 382
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ + S+M+LG A +G+ ++LF + K +PN VTF+GVLTA
Sbjct: 342 MKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTA 391
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 32/47 (68%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R+A + +++++GLA NG +ELF +E +G P+ +TFVGVL A
Sbjct: 287 RNAVSWTSLIVGLAVNGFGEEALELFREMEGQGLVPSEITFVGVLYA 333
>gi|255586940|ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525897|gb|EEF28314.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
P R + ++M+LGLA NG+ ++LF ++ RP+ V+F+ VLTA
Sbjct: 316 PRRGLSCWNSMILGLAMNGQENEALQLFSVLQSSDLRPDDVSFIAVLTA 364
>gi|357125803|ref|XP_003564579.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Brachypodium distachyon]
Length = 456
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGV 60
MP R+ + +AM+ G ++ G N V LF+ + ++G RPN TF VLT+ GV
Sbjct: 133 MPERNVVSWNAMIGGCSQAGLNEEAVGLFLEMCRQGVRPNDSTFPCVLTSVANAGALGV 191
>gi|326522570|dbj|BAK07747.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D +A++ G A+NG + + LF S+ + G RP+ +T VGVL+A
Sbjct: 297 KDNVAWNALITGYAQNGMSKEAISLFHSMRQAGARPDKITLVGVLSA 343
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKR-GPRPNAVTFVGVLTA 51
+P ++ + +A++ GLA NG+ + F + K+ G RP+ +TF+GVL+A
Sbjct: 395 LPCKNEASWNALICGLAFNGRGQEAIRQFELMRKQEGLRPDDITFIGVLSA 445
>gi|302776814|ref|XP_002971551.1| hypothetical protein SELMODRAFT_61534 [Selaginella moellendorffii]
gi|300160683|gb|EFJ27300.1| hypothetical protein SELMODRAFT_61534 [Selaginella moellendorffii]
Length = 505
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD T +AM+ +++G+ EL+ +E +G +P VT V +LTA
Sbjct: 252 MPARDIVTWNAMIAAYSQHGQGDKAFELYAEMEPQGFKPELVTLVNLLTA 301
>gi|255587181|ref|XP_002534168.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525755|gb|EEF28217.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 513
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP RD+ + SAM+ G +NG N V L++ +++ G N +F VLTA I
Sbjct: 362 MPQRDSISWSAMIAGYVQNGCNEEAVHLYVEMKRDGESLNRSSFTSVLTACADI 415
>gi|125587880|gb|EAZ28544.1| hypothetical protein OsJ_12524 [Oryza sativa Japonica Group]
Length = 559
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIF 58
+D T +AM+ GLA +G + ++LF ++ G PN VT V VL+A +F
Sbjct: 310 KDVTLWTAMISGLAFHGHGDVALDLFWKMQAEGTEPNGVTLVAVLSACSHAGLF 363
>gi|302779884|ref|XP_002971717.1| hypothetical protein SELMODRAFT_95871 [Selaginella moellendorffii]
gi|300160849|gb|EFJ27466.1| hypothetical protein SELMODRAFT_95871 [Selaginella moellendorffii]
Length = 452
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD T +A+++ A+NG G +ELF G +P+AV F+ +LTA
Sbjct: 303 RDVTAWTAVIVAHARNGHGGAALELFREFGLEGMQPDAVAFLSILTA 349
>gi|225465641|ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Vitis vinifera]
Length = 539
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + S+M+ G K G+ G+ + +F + GP+ N VT V VL A
Sbjct: 204 MPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRVVGPKANEVTMVSVLCA 253
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + S M+ G +N + + +ELF + G +PN VT V VL+A
Sbjct: 422 MPERDVFSWSTMISGYTQNEQPNLALELFHKMVASGIKPNEVTMVSVLSA 471
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 30/41 (73%)
Query: 11 SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+A++ GLA +G + +++F +E+R + NA+TF+GVLTA
Sbjct: 534 NAIICGLAVHGHANLSLKIFSDLERRHIKLNAITFIGVLTA 574
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T +A++LGLA NG +E+F + P+ VTF+GVLTA
Sbjct: 338 MHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTA 387
>gi|449479818|ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 512
Score = 42.4 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIE-KRGPRPNAVTFVGVLTAYGKI 55
MP R+ + +A++ G A+NGK +E+F+ +E ++G +PN V+ VL A ++
Sbjct: 174 MPVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQL 228
>gi|222635914|gb|EEE66046.1| hypothetical protein OsJ_22034 [Oryza sativa Japonica Group]
Length = 425
Score = 42.4 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP R +AM+ G A+ G VE+F S+ G RP+ TF VL A ++
Sbjct: 88 MPQRSVVAWNAMISGCARGGAEARAVEMFGSMRAEGMRPDQFTFASVLCACARL 141
>gi|255570475|ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534500|gb|EEF36200.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 491
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
RD + ++ GLA +G++ VELF + G PN VTFV VL A ++
Sbjct: 307 RDVHVYTCLISGLANHGQSATAVELFERMHSEGVVPNEVTFVSVLNACSRM 357
>gi|255538308|ref|XP_002510219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550920|gb|EEF52406.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKI 57
MP RD + +A++ G ++NG + +ELF+ + K G P T VG+L + G++++
Sbjct: 503 MPIRDVVSWNALICGYSRNGYDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLEL 558
>gi|30017569|gb|AAP12991.1| hypothetical protein [Oryza sativa Japonica Group]
gi|40539031|gb|AAR87288.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711017|gb|ABF98812.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 676
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIF 58
+D T +AM+ GLA +G + ++LF ++ G PN VT V VL+A +F
Sbjct: 427 KDVTLWTAMISGLAFHGHGDVALDLFWKMQAEGTEPNGVTLVAVLSACSHAGLF 480
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T +AM+ GLA NG +E F + G +PN+V+++ VLTA
Sbjct: 433 MGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTA 482
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T +AM+ GLA NG +E F + G +PN+V+++ VLTA
Sbjct: 433 MGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTA 482
>gi|302759985|ref|XP_002963415.1| hypothetical protein SELMODRAFT_61513 [Selaginella moellendorffii]
gi|300168683|gb|EFJ35286.1| hypothetical protein SELMODRAFT_61513 [Selaginella moellendorffii]
Length = 500
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD T +AM+ +++G+ EL+ +E +G +P VT V +LTA
Sbjct: 247 MPERDIVTWNAMIAAYSQHGQGDKAFELYAEMEPQGFKPELVTLVNLLTA 296
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 32/44 (72%)
Query: 8 TTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
T +AM++GLA++G+ ++LF ++ G +P+ VTF+GVL+A
Sbjct: 685 TAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSA 728
>gi|242094040|ref|XP_002437510.1| hypothetical protein SORBIDRAFT_10g028370 [Sorghum bicolor]
gi|241915733|gb|EER88877.1| hypothetical protein SORBIDRAFT_10g028370 [Sorghum bicolor]
Length = 653
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP-RPNAVTFVGVLTA 51
M ++ T S+M++GLA +G+ + LF + +R PN VTF+GVLTA
Sbjct: 340 MQEKNVYTYSSMIVGLASHGRANDAIALFNDMVRRADVEPNHVTFIGVLTA 390
>gi|242084152|ref|XP_002442501.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
gi|241943194|gb|EES16339.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
Length = 701
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D + +A++ G A NG+ + +F +E G RP+ VTFVG+L+A
Sbjct: 518 MVGKDIVSWNALVDGYASNGQGTEAISVFREMEANGVRPDEVTFVGILSA 567
>gi|224094065|ref|XP_002310070.1| predicted protein [Populus trichocarpa]
gi|222852973|gb|EEE90520.1| predicted protein [Populus trichocarpa]
Length = 438
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+MP RD + S ++ G AK+G G + +F + GP+ N VT V VL A
Sbjct: 101 LMPERDVRSWSCLIDGYAKSGNYGDAMAVFEKMRTSGPKANEVTMVSVLCA 151
>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
Length = 766
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
RD + S++++G A+ G +LF + G RPN VTF+GVLTA ++
Sbjct: 521 RDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRV 571
>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
Length = 749
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
RD + S++++G A+ G +LF + G RPN VTF+GVLTA ++
Sbjct: 504 RDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRV 554
>gi|357138657|ref|XP_003570906.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Brachypodium distachyon]
Length = 608
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D +AM+ G A+NG + + LF S+ + G P+ +T VGVL+A
Sbjct: 282 KDVVAWNAMITGYAQNGMSKEAIALFHSMRQEGASPDKITLVGVLSA 328
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIE-KRGPRPNAVTFVGVLTA 51
+P ++ T +A++ GLA NG+ + F + + G RP+ +TF+GVL+A
Sbjct: 380 LPCKNEATWNALICGLAFNGRGHEAIRQFEVMRNEEGLRPDDITFIGVLSA 430
>gi|224141397|ref|XP_002324059.1| predicted protein [Populus trichocarpa]
gi|222867061|gb|EEF04192.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSI-EKRGPRPNAVTFVGVLTA 51
M ++ T SAM+LGLA++G G+ELF+ + E PN VTF+GVL A
Sbjct: 281 MEKKNVWTWSAMILGLAQHGFGKEGLELFLKMKESVSICPNYVTFLGVLCA 331
>gi|115469032|ref|NP_001058115.1| Os06g0625800 [Oryza sativa Japonica Group]
gi|51535726|dbj|BAD37743.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113596155|dbj|BAF20029.1| Os06g0625800 [Oryza sativa Japonica Group]
Length = 433
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP R +AM+ G A+ G VE+F S+ G RP+ TF VL A ++
Sbjct: 96 MPQRSVVAWNAMISGCARGGAEARAVEMFGSMRAEGMRPDQFTFASVLCACARL 149
>gi|225445484|ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 533
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA--YGKIKIFG 59
+P +DA +AM+ G+A NG +ELF + G +P TFV VLTA + ++ G
Sbjct: 307 IPNKDAGAWNAMISGVAMNGDAWKSLELFNKMISNGTQPTETTFVAVLTACTHARLVKEG 366
Query: 60 VTLM-------GIQPQ 68
+ L G++PQ
Sbjct: 367 LKLFEQMSSNYGVEPQ 382
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVTL 62
P ++ + +A + G +NG N ++LF + + G RPN VTF V+ A G++ FG+ +
Sbjct: 145 PFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGM 204
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D SAM++G +G+ ++LF ++++ G PN VTFVG+LTA
Sbjct: 435 KDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTA 481
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + +A+++G A+NG+ ++ + + G +P+ +TF+G+L A
Sbjct: 203 MPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFA 252
>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVTL 62
P ++ + +A + G +NG N ++LF + + G RPN VTF V+ A G++ FG+ +
Sbjct: 145 PFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGM 204
>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVTL 62
P ++ + +A + G +NG N ++LF + + G RPN VTF V+ A G++ FG+ +
Sbjct: 145 PFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGM 204
>gi|15240572|ref|NP_200385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171613|sp|Q9FM64.1|PP431_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g55740, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 21; Flags: Precursor
gi|9758608|dbj|BAB09241.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332009292|gb|AED96675.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 830
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P R+A +A+M+G +NGKN + LF + K+G P VT L+A
Sbjct: 234 IPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSA 283
>gi|302819822|ref|XP_002991580.1| hypothetical protein SELMODRAFT_478 [Selaginella moellendorffii]
gi|300140613|gb|EFJ07334.1| hypothetical protein SELMODRAFT_478 [Selaginella moellendorffii]
Length = 560
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD T +A+++ A+NG G +ELF G +P+AV F+ +LTA
Sbjct: 417 RDVTAWTAVIVAHARNGHGGAALELFREFGLEGMQPDAVAFLSILTA 463
>gi|357156786|ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 694
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP D + +A++ G A NG + +F +E RP+ VTFVGVL+A
Sbjct: 511 MPAPDIVSWNALIDGYASNGHGTEAISVFREMEDNDVRPDEVTFVGVLSA 560
>gi|296085295|emb|CBI29027.3| unnamed protein product [Vitis vinifera]
Length = 384
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + S+M+ G K G+ G+ + +F + GP+ N VT V VL A
Sbjct: 49 MPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRVVGPKANEVTMVSVLCA 98
>gi|326507244|dbj|BAJ95699.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 524
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVL 49
M R + + M+ G + NG+ G+ELF + + G PN+VTF+GVL
Sbjct: 327 MQQRSVVSWNTMISGFSLNGQGIKGIELFRQMVRSGGEPNSVTFLGVL 374
>gi|356528308|ref|XP_003532746.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g25580-like [Glycine max]
Length = 664
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP R+ TT M+ LAKNG ++LF + G +P+ F+GVL A G +
Sbjct: 362 MPERNLTTWDTMITQLAKNGFAEDSIDLFTQFKNLGLKPDGQMFIGVLFACGML 415
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA--YGKIKIFG 59
M RD +AM+ G A++G + LF ++ G PN +TFV VLTA + + FG
Sbjct: 302 MHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFG 361
Query: 60 V-------TLMGIQPQ 68
+ L GI+P+
Sbjct: 362 IRCFEGMQELYGIEPR 377
>gi|347954532|gb|AEP33766.1| organelle transcript processing 82, partial [Lepidium virginicum]
Length = 464
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R ++ +AM+ G A +GK +LF + K G P+ +TFVG+L+A
Sbjct: 369 MLARSLSSWNAMIFGFAMHGKANAAFDLFSKMRKSGIEPDDITFVGLLSA 418
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA--YGKIKIFG 59
M RD +AM+ G A++G + LF ++ G PN +TFV VLTA + + FG
Sbjct: 351 MHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFG 410
Query: 60 V-------TLMGIQPQ 68
+ L GI+P+
Sbjct: 411 IRCFEGMQELYGIEPR 426
>gi|357478647|ref|XP_003609609.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510664|gb|AES91806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 576
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAY 52
RD SAM+ G NG+ VELF + PN VT+ G+LTAY
Sbjct: 395 RDVVAYSAMIYGCGINGRASDAVELFERMAGECIIPNLVTYTGILTAY 442
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVL 49
M +D +AMM+GL+ NG LF +EK G RP+ TF+G+L
Sbjct: 377 MKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLL 424
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP +D + S M+ G A NG ++LF ++ +P+ T VGVL+A
Sbjct: 276 MPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSA 325
>gi|255542916|ref|XP_002512521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548482|gb|EEF49973.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 422
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M ++ T +AM+ GLA +G+ ++LF+ ++K R N +TFVG+L A
Sbjct: 353 MKEKEVFTWNAMICGLAMHGRAEDAIKLFLKMQKEKVRSNEITFVGLLNA 402
>gi|224141809|ref|XP_002324255.1| predicted protein [Populus trichocarpa]
gi|222865689|gb|EEF02820.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 41/80 (51%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M D + S M+ GLA +GK +ELF ++K PN +TF+G+L+A +
Sbjct: 312 MSKGDVISWSTMIGGLANHGKAREAIELFKRMKKAKIEPNGITFLGLLSACAHAGFWNEG 371
Query: 62 LMGIQPQNLWYYIDGQIDAW 81
L + Y+I+ +++ +
Sbjct: 372 LAYFDSMSKDYHIEPEVEHY 391
>gi|255551084|ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544410|gb|EEF45931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M RD + S M+ GLA +GK + +F +++ +PN +TFVG+L+A +
Sbjct: 288 MRGRDVISWSTMIGGLANHGKVREAIAIFERMKQTNIKPNGITFVGLLSACAHAGFWEEG 347
Query: 62 LMGIQPQNLWYYIDGQIDAW 81
LM ++I+ +I+ +
Sbjct: 348 LMYFDTMKKDFHIEPEIEHY 367
>gi|302756243|ref|XP_002961545.1| hypothetical protein SELMODRAFT_21801 [Selaginella moellendorffii]
gi|300170204|gb|EFJ36805.1| hypothetical protein SELMODRAFT_21801 [Selaginella moellendorffii]
Length = 520
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 32/47 (68%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R+ + +AM+ A++G++ +ELF +++RG PN VTF+ +L++
Sbjct: 381 RNIVSWTAMISAYAQHGRSSESMELFQRMQQRGVEPNQVTFISILSS 427
>gi|302775706|ref|XP_002971270.1| hypothetical protein SELMODRAFT_62636 [Selaginella moellendorffii]
gi|300161252|gb|EFJ27868.1| hypothetical protein SELMODRAFT_62636 [Selaginella moellendorffii]
Length = 435
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 32/47 (68%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R+ + +AM+ A++G++ +ELF +++RG PN VTF+ +L++
Sbjct: 303 RNIVSWTAMISAYAQHGRSSESMELFQRMQQRGVEPNQVTFISILSS 349
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP +D + AM+ G A NG ++LF+ +++ +P+ T VGVL+A ++
Sbjct: 274 MPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARL 327
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVL 49
M +D +A++ GLA NG + LF +EK G +P+ TF+G+L
Sbjct: 375 MKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLL 422
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP ++ + +AM+ G +++G + LF +++ G PN VTFVGVL+A
Sbjct: 736 MPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSA 785
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P RD T +AM+ G A+ G + + LF ++++G +P+ +TF VLT+
Sbjct: 310 LPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTS 359
>gi|326511827|dbj|BAJ92058.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 581
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP-RPNAVTFVGVLTA 51
M RD + + +++G A NG +G ++LF +E+ G PN +TF+GVLT+
Sbjct: 358 MVKRDNFSWTVIIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVLTS 408
>gi|357431710|gb|AET78532.1| At1g59720-like protein [Arabidopsis halleri]
gi|357431728|gb|AET78541.1| At1g59720-like protein [Arabidopsis halleri]
Length = 163
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP--RPNAVTFVGVLTA 51
M RD + +AM+LG A +G+ G ++ F + K G +PN+VTFV +L A
Sbjct: 65 MQKRDLASWNAMILGFATHGRAGEALDCFDRMVKEGKNVKPNSVTFVALLIA 116
>gi|242046396|ref|XP_002461069.1| hypothetical protein SORBIDRAFT_02g040130 [Sorghum bicolor]
gi|241924446|gb|EER97590.1| hypothetical protein SORBIDRAFT_02g040130 [Sorghum bicolor]
Length = 552
Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD +AM++G NG+ G + LF +E+ PN VTF+ +LTA
Sbjct: 368 RDVKAWTAMIMGFGVNGQPGSAITLFYRMEEDCVFPNGVTFLALLTA 414
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
RD + M+ G AK G+ ++L + + G RP++ T VGVL+A G
Sbjct: 267 RDLVLCNCMVDGYAKAGQIREAIDLIDGMRQHGMRPSSGTLVGVLSACG 315
>gi|361066821|gb|AEW07722.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
Length = 151
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M RD + +AM++G A +G ++LF ++ G P+ VTF+GVL+A V
Sbjct: 68 MTTRDVVSWNAMIVGYAIHGCGKEALQLFEQMKHTGTGPDHVTFIGVLSA--------VC 119
Query: 62 LMGIQPQNLWYYIDGQIDAWQ 82
G+ W Y D ++ +
Sbjct: 120 HAGLVDDG-WQYFDSMVEDYH 139
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ T ++M+ G A+NG+ + +F + K G +P+ ++F+G+L A
Sbjct: 421 MPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFA 470
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ +AM++GLA++G V LF S++ G P+ V+F+G+L+A
Sbjct: 1269 MNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSA 1318
>gi|357431680|gb|AET78517.1| At1g59720-like protein [Arabidopsis halleri]
Length = 163
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP--RPNAVTFVGVLTA 51
M RD + +AM+LG A +G+ G ++ F + K G +PN+VTFV +L A
Sbjct: 65 MQKRDLASWNAMILGFATHGRAGEALDCFDRMVKEGKNVKPNSVTFVALLIA 116
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ +AM++GLA++G V LF S++ G P+ V+F+G+L+A
Sbjct: 554 MNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSA 603
>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
gi|194705708|gb|ACF86938.1| unknown [Zea mays]
gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP D + +AM+ G A+NG+ + F + G RP+ VTFVGVL+A
Sbjct: 324 MPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSA 373
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + +AM+ G++G G LF+ + + G PN T+ GVL A
Sbjct: 223 MPVRDVVSWTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRA 272
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ +AM++GLA++G V LF S++ G P+ V+F+G+L+A
Sbjct: 192 MNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSA 241
>gi|357431704|gb|AET78529.1| At1g59720-like protein [Arabidopsis halleri]
Length = 163
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP--RPNAVTFVGVLTA 51
M RD + +AM+LG A +G+ G ++ F + K G +PN+VTFV +L A
Sbjct: 65 MQKRDLASWNAMILGFATHGRAGEALDCFDRMVKEGKNVKPNSVTFVALLIA 116
>gi|255566945|ref|XP_002524455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536243|gb|EEF37895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 486
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M P+ + +AM+ G A +G+ + + LF + K G P+ +TF+GVL+A
Sbjct: 419 MNPKSLASWNAMISGFAMHGQADLAISLFSRMTKEGLVPDNITFIGVLSA 468
>gi|302793382|ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
gi|300153805|gb|EFJ20442.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
Length = 899
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+A T +AM+ GLA++G++ +E F +E G RPN+VT++ L A
Sbjct: 393 NAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVTYLASLEA 438
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T +AM++GLA NG +++F ++ K P+ +T++GVL+A
Sbjct: 433 MSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSA 482
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T +AM++GLA NG +++F ++ K P+ +T++GVL+A
Sbjct: 412 MSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSA 461
>gi|357431690|gb|AET78522.1| At1g59720-like protein [Arabidopsis halleri]
gi|357431698|gb|AET78526.1| At1g59720-like protein [Arabidopsis halleri]
Length = 163
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP--RPNAVTFVGVLTA 51
M RD + +AM+LG A +G+ G ++ F + K G +PN+VTFV +L A
Sbjct: 65 MQKRDLASWNAMILGFATHGRAGEALDCFDRMVKEGKNVKPNSVTFVALLIA 116
>gi|115470991|ref|NP_001059094.1| Os07g0191500 [Oryza sativa Japonica Group]
gi|34394559|dbj|BAC83863.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510108|dbj|BAD30876.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610630|dbj|BAF21008.1| Os07g0191500 [Oryza sativa Japonica Group]
Length = 550
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF---MSIEKRGPRPNAVTFVGVLTA 51
MP RD + + M+L LA +G+ VELF +EK PNA+TFV VL+A
Sbjct: 235 MPARDLASWNVMILTLANHGRVCESVELFDRMTQVEKMA--PNAITFVAVLSA 285
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ + ++++ G A++G+ V LF + + G +PN ++FVGVL+A
Sbjct: 203 MPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSA 252
>gi|125599411|gb|EAZ38987.1| hypothetical protein OsJ_23405 [Oryza sativa Japonica Group]
Length = 531
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF---MSIEKRGPRPNAVTFVGVLTA 51
MP RD + + M+L LA +G+ VELF +EK PNA+TFV VL+A
Sbjct: 216 MPARDLASWNVMILTLANHGRVCESVELFDRMTQVEKMA--PNAITFVAVLSA 266
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D + +AM++G A +GK + +F + + G RP+ VT VGVL+A
Sbjct: 400 MKCKDVYSYTAMIVGFAMHGKADRALAIFSEMPRMGVRPDHVTLVGVLSA 449
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+MP ++ + ++M+ GLA G + +F ++ G +P++VT VGVL +
Sbjct: 298 LMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNS 348
>gi|147810325|emb|CAN65024.1| hypothetical protein VITISV_026273 [Vitis vinifera]
Length = 805
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA--YGKIKIFG 59
+P +DA +AM+ G+A NG +ELF + G +P TFV VLTA + ++ G
Sbjct: 579 IPNKDAGAWNAMISGVAMNGDAWKSLELFNKMISNGTQPTETTFVAVLTACTHARLVREG 638
Query: 60 VTLM-------GIQPQNLWY 72
+ L G++PQ Y
Sbjct: 639 LKLFEQMSSNYGVEPQXEHY 658
>gi|357111278|ref|XP_003557441.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Brachypodium distachyon]
Length = 551
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP-RPNAVTFVGVLTA 51
MP RD T+ + M+L LA +G+ VELF + + PNA+TFV VL+A
Sbjct: 236 MPERDITSWNVMILTLANHGRVRESVELFDRMARAEKFVPNAITFVAVLSA 286
>gi|225435933|ref|XP_002267829.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14170-like [Vitis vinifera]
Length = 455
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + S+++LG +G + ++LF + G +PN VTF+G L+A
Sbjct: 272 MPERDVISWSSIILGYGLSGNVDIALDLFDRMRVAGVKPNDVTFLGALSA 321
>gi|227462996|gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227462998|gb|ACP39951.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 532
Score = 41.6 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 9/75 (12%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGK------- 54
MP +DA ++++ GLA +G++ ++LF ++ PN VTF+ VL+A +
Sbjct: 301 MPDKDAFAFTSLISGLANHGQSADAIQLFGRMQSEKVIPNEVTFICVLSACSRMGLVDEG 360
Query: 55 IKIFGV--TLMGIQP 67
++IF + GI+P
Sbjct: 361 LRIFNCMSVVYGIEP 375
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ + SAM+ G G +ELF ++ G RPN VG LTA
Sbjct: 200 MPERNEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPNHAGIVGALTA 249
>gi|226528958|ref|NP_001141436.1| uncharacterized protein LOC100273546 [Zea mays]
gi|194704572|gb|ACF86370.1| unknown [Zea mays]
gi|414877969|tpg|DAA55100.1| TPA: hypothetical protein ZEAMMB73_905907 [Zea mays]
Length = 700
Score = 41.6 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D + +A++ G A NG+ + +F +E G RP+ VTFVG+L+A
Sbjct: 517 MVYKDIVSWNALIDGYASNGQGTEAIAVFREMEANGVRPDEVTFVGILSA 566
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 41.6 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R ++M+ G +++G + + +F + G RPNAVTFVGVL+A
Sbjct: 442 MSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSA 491
>gi|297607983|ref|NP_001061009.2| Os08g0153600 [Oryza sativa Japonica Group]
gi|255678154|dbj|BAF22923.2| Os08g0153600 [Oryza sativa Japonica Group]
Length = 551
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA--YGKIKIFG 59
M RD +AM+ G A++G + LF ++ G PN +TFV VLTA + + FG
Sbjct: 302 MHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFG 361
Query: 60 V-------TLMGIQPQ 68
+ L GI+P+
Sbjct: 362 IRCFEGMQELYGIEPR 377
>gi|255594521|ref|XP_002536106.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223520840|gb|EEF26277.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
D +AM++G +NG N +ELF + K GPRPN+ T +L+ +
Sbjct: 302 DVVAWTAMIVGYVQNGLNDDAMELFRIMAKEGPRPNSFTLAAMLSVSSNV 351
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 30/47 (63%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D + ++M++ L ++G +ELF + G +P+ +T+VGVL+A
Sbjct: 403 KDTVSWTSMIIALGQHGLGQESIELFEKMLALGIKPDHITYVGVLSA 449
>gi|224082560|ref|XP_002306741.1| predicted protein [Populus trichocarpa]
gi|222856190|gb|EEE93737.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
P + + ++++LGLA +G+ V LF +E +P+ V+F+GVLTA
Sbjct: 291 PKKGLSCWNSLILGLAMSGRGNEAVRLFSKLESSNLKPDHVSFIGVLTA 339
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ T ++M+ G A+NG+ + +F + K G +P+ ++F+G+L A
Sbjct: 480 MPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFA 529
>gi|255547387|ref|XP_002514751.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546355|gb|EEF47857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 335
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP ++ T SAM+ G A NG +E F +++ G P+ TF GVL+A
Sbjct: 194 MPNKNVVTWSAMISGFAMNGYGRQAIETFGKMQRIGVLPDDQTFTGVLSA 243
>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 696
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 12/73 (16%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA---------- 51
MP R+ + +A++ G ++G +ELF+ +E+ G P+ TF +LTA
Sbjct: 154 MPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLMH 213
Query: 52 --YGKIKIFGVTL 62
+GKI +G L
Sbjct: 214 QLHGKIVKYGSAL 226
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + +AM++G A+NG +E+F + G +P+ VT +GVL+A
Sbjct: 452 MVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSA 501
>gi|242049708|ref|XP_002462598.1| hypothetical protein SORBIDRAFT_02g028755 [Sorghum bicolor]
gi|241925975|gb|EER99119.1| hypothetical protein SORBIDRAFT_02g028755 [Sorghum bicolor]
Length = 655
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + S M+ G + G++ M +ELF S+ PN VT L+A
Sbjct: 369 MPERDTVSWSTMISGYVQTGRSDMALELFYSMLNTSVEPNEVTLASALSA 418
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 29/41 (70%)
Query: 11 SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+AM+ LA +G M ++LF +++ +PN++TF+GVL+A
Sbjct: 481 NAMICSLAIHGYAHMSLDLFSQLQRTSIKPNSITFIGVLSA 521
>gi|449449649|ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 589
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIE-KRGPRPNAVTFVGVLTAYGKI 55
MP R+ + +A++ G A+NGK +E+F+ +E ++G +PN V+ VL A ++
Sbjct: 174 MPVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQL 228
>gi|297823163|ref|XP_002879464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325303|gb|EFH55723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 713
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
P +D + +AM+ GL+ NG+ +ELF + G P+ VTFV +++A
Sbjct: 474 PNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGTEPDDVTFVNIISA 522
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
R++ T SAM+ G ++NG++ ++LF + G +P+ T VGVL A I
Sbjct: 274 RNSITWSAMVTGYSQNGESLEAIKLFSRMFSAGIKPSEYTIVGVLNACSDI 324
>gi|383152426|gb|AFG58310.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
Length = 151
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M RD + +AM++G A +G ++LF ++ G P+ VTF+GVL+A T
Sbjct: 68 MTTRDVVSWNAMIVGYAIHGCGKEALQLFEQMKHTGTGPDHVTFIGVLSA---------T 118
Query: 62 LMGIQPQNLWYYIDGQIDAWQ 82
+ W Y D ++ +
Sbjct: 119 CHAGLVDDGWQYFDSMVEDYH 139
>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 736
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R++ T SAM+ G A+NG+ +F+ + G P TFVGVL A
Sbjct: 289 RNSITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNA 335
>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
Length = 696
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 12/73 (16%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA---------- 51
MP R+ + +A++ G ++G +ELF+ +E+ G P+ TF +LTA
Sbjct: 154 MPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLMH 213
Query: 52 --YGKIKIFGVTL 62
+GKI +G L
Sbjct: 214 QLHGKIVKYGSAL 226
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D SAM+ GLA +G+ +ELF+ +++ +PN+VTF +L A
Sbjct: 541 KDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCA 587
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGK 54
+D + ++M+ G + G ++LF + G PNAVT V V++A K
Sbjct: 306 KDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAK 355
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIF 58
M RD + +AM+ G ++ G+ +ELF +E G +P+ VT V VL+A ++ F
Sbjct: 307 MHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAF 363
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 11 SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
++M+ GLA++G + +F + G +P+ VTFVGVL A G
Sbjct: 420 NSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACG 462
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP ++ + + M+ G ++NG + + +F + + G RPNA T V L+A KI
Sbjct: 307 MPEKNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKI 360
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 41.6 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP RD T +A + A+NG + LF S+++ G PN VT VL+A I
Sbjct: 280 MPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASI 333
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF--MSIEKRGPRPNAVTFVGVLTA 51
MP ++ + +AM+ LA +GK + LF MS E RPN +TFV +L+A
Sbjct: 381 MPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSA 432
>gi|383152429|gb|AFG58313.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
gi|383152430|gb|AFG58314.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
Length = 151
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M RD + +AM++G A +G ++LF ++ G P+ VTF+GVL+A T
Sbjct: 68 MTTRDVVSWNAMIVGYAIHGCGKEALQLFEQMKHTGTGPDHVTFIGVLSA---------T 118
Query: 62 LMGIQPQNLWYYIDGQIDAWQ 82
+ W Y D ++ +
Sbjct: 119 CHAGLVDDGWQYFDSMVEDYH 139
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 41.6 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP RD T +A + A+NG + LF S+++ G PN VT VL+A I
Sbjct: 280 MPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASI 333
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF--MSIEKRGPRPNAVTFVGVLTA 51
MP ++ + +AM+ LA +GK + LF MS E RPN +TFV +L+A
Sbjct: 381 MPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSA 432
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 41.6 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P RD + +A++ G A+ G + +ELF ++ G + N VT+ GVLTA
Sbjct: 426 LPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTA 475
>gi|383152414|gb|AFG58299.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
gi|383152415|gb|AFG58300.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
gi|383152416|gb|AFG58301.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
gi|383152417|gb|AFG58302.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
gi|383152418|gb|AFG58303.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
gi|383152419|gb|AFG58304.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
gi|383152421|gb|AFG58305.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
gi|383152422|gb|AFG58306.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
gi|383152424|gb|AFG58308.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
gi|383152425|gb|AFG58309.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
gi|383152427|gb|AFG58311.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
gi|383152428|gb|AFG58312.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
Length = 151
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M RD + +AM++G A +G ++LF ++ G P+ VTF+GVL+A T
Sbjct: 68 MTTRDVVSWNAMIVGYAIHGCGKEALQLFEQMKHTGTGPDHVTFIGVLSA---------T 118
Query: 62 LMGIQPQNLWYYIDGQIDAWQ 82
+ W Y D ++ +
Sbjct: 119 CHAGLVDDGWQYFDSMVEDYH 139
>gi|242095158|ref|XP_002438069.1| hypothetical protein SORBIDRAFT_10g007640 [Sorghum bicolor]
gi|241916292|gb|EER89436.1| hypothetical protein SORBIDRAFT_10g007640 [Sorghum bicolor]
Length = 563
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTF 45
MP R + +AM+ G AKNG+ +ELF + + G RPN TF
Sbjct: 77 MPHRSVVSWTAMVSGYAKNGRAPEALELFALMLRSGARPNQFTF 120
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ + ++++ A++G V LF +E+ G +PN VTF+ +L+A
Sbjct: 381 MPSRNVISWTSLITACAQHGFGEDAVTLFARMEEDGVKPNDVTFLSLLSA 430
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + S +++G A++G + LF ++ G PN VTFVGVLTA
Sbjct: 534 MDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTA 583
>gi|218199241|gb|EEC81668.1| hypothetical protein OsI_25221 [Oryza sativa Indica Group]
Length = 931
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF---MSIEKRGPRPNAVTFVGVLTA 51
MP RD + + M+L LA +G+ VELF +EK PNA+TFV VL+A
Sbjct: 235 MPARDLASWNVMILTLANHGRVCESVELFDRMTQVEKMA--PNAITFVAVLSA 285
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP ++ + + ++ GLA NG+ +E F + ++ PN VTF+GVL+A
Sbjct: 387 MPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSA 436
>gi|449488709|ref|XP_004158148.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
mitochondrial-like [Cucumis sativus]
Length = 556
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAY 52
M +D T +AM+ G +G+ +E +E+ G RPN +TF+ VL AY
Sbjct: 353 MKNKDVKTWTAMITGYGDHGQTRKVMETLYRMEEEGFRPNEITFLAVLNAY 403
>gi|449451962|ref|XP_004143729.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAY 52
M +D T +AM+ G +G+ +E +E+ G RPN +TF+ VL AY
Sbjct: 388 MKNKDVKTWTAMITGYGDHGQTRKVMETLYRMEEEGFRPNEITFLAVLNAY 438
>gi|297806919|ref|XP_002871343.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317180|gb|EFH47602.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 511
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 15/97 (15%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA--YGKIKIFGVTL 62
R+ + ++M+ LA +GK+ +EL+ + + G RP+AVTFVG+L A +G + + G L
Sbjct: 280 RNLISWNSMIGSLATHGKHDEALELYAQMLQEGERPDAVTFVGLLLACVHGGMVLKGKEL 339
Query: 63 M-------GIQPQNLWYY---ID--GQIDAWQAACQI 87
+ I P+ L +Y ID G++ Q AC +
Sbjct: 340 LKSMEEVHKISPK-LEHYGCMIDLLGRVGKLQEACDL 375
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEK-RGPRPNAVTFVGVLTA---YGKIKI 57
MP ++ T+ + ++ G ++NG + +F+ +EK + +PN +T V VL A G+++I
Sbjct: 174 MPNKNVTSWTTVISGFSQNGNYSEALTMFLCMEKDKSVKPNHITLVSVLPACANLGELEI 233
Query: 58 FGVTLMGIQPQNLWY 72
G L G +N ++
Sbjct: 234 -GRRLEGYARENGFF 247
>gi|449465220|ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Cucumis sativus]
Length = 874
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP R + + M+LGLA+N G +E+F + G PN VT V++A I
Sbjct: 324 MPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVAPNEVTMASVMSACSHI 377
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 36/51 (70%), Gaps = 4/51 (7%)
Query: 5 RDATTS----SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D T++ +A++ GLA +G + +E+F ++++R + N++TF+GVL+A
Sbjct: 690 KDKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLSA 740
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGV 60
MMP +D + S M+ G A+N + ++LF + PN +T V V +A +
Sbjct: 587 MMPEKDVFSWSTMISGYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSA--------I 638
Query: 61 TLMGIQPQNLW 71
+G P+ W
Sbjct: 639 AALGKLPEGRW 649
>gi|18398422|ref|NP_564401.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806407|sp|P0C7R0.1|PPR69_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g32415, mitochondrial; Flags: Precursor
gi|332193363|gb|AEE31484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D + ++M++GL+ +G + LF + G +PN+VTF+GVL+A
Sbjct: 529 MVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSA 578
>gi|357464871|ref|XP_003602717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491765|gb|AES72968.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 554
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ T +A++ GLA +G++ +++F +++ G +P+ F+GVL A
Sbjct: 243 MPERNVVTWTALINGLAVHGRSREALKVFYEMKESGLKPDGALFIGVLVA 292
>gi|255553251|ref|XP_002517668.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543300|gb|EEF44832.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 512
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP D T +AM++GLA NG +++F+ + K P+ +T+VGVL A
Sbjct: 382 MPRPDKFTWTAMIVGLAINGYGEEALDMFVQMLKASVTPDEITYVGVLCA 431
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVL 49
M +D +AMM+GL+ NG LF +EK G RP+ TF+G+L
Sbjct: 377 MKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLL 424
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP +D + S M+ G A NG ++LF ++ +P+ T VGVL+A
Sbjct: 276 MPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSA 325
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + S M++G+A NG F +++ G PN V+ GVL+A
Sbjct: 229 MPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSA 278
>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 762
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R + ++M+ G A+NG+ + LF + G RPN +TFVGVL+A
Sbjct: 444 MSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSA 493
>gi|255550516|ref|XP_002516308.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544538|gb|EEF46055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 599
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP ++ + ++++ G AKNG + +ELF+ +++ P+A TFV VL A
Sbjct: 191 MPVKNTVSWTSLIAGFAKNGHSYKALELFLQMQEENVLPSAFTFVTVLGA 240
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D + ++++ GLA+NG ++LF + + PN VTF GVL+A
Sbjct: 295 MSEKDIVSWNSLITGLAQNGHAEESLDLFRKMVEGNRLPNHVTFSGVLSA 344
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + S M++G+A NG F +++ G PN V+ GVL+A
Sbjct: 221 MPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSA 270
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
M +D T +AM+ G A+NG + + LF + + G P+ +T VGVL+A I
Sbjct: 288 MVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASI 341
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP--RPNAVTFVGVLTA 51
MP ++ + +AM+ LA +G+ + LF + K G RPN ++F+GVL+A
Sbjct: 389 MPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSA 440
>gi|449516814|ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like isoform 1 [Cucumis sativus]
Length = 703
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP R + + M+LGLA+N G +E+F + G PN VT V++A I
Sbjct: 153 MPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVAPNEVTMASVMSACSHI 206
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 36/51 (70%), Gaps = 4/51 (7%)
Query: 5 RDATTS----SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D T++ +A++ GLA +G + +E+F ++++R + N++TF+GVL+A
Sbjct: 519 KDKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLSA 569
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGV 60
MMP +D + S M+ G A+N + ++LF + PN +T V V +A +
Sbjct: 416 MMPEKDVFSWSTMISGYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSA--------I 467
Query: 61 TLMGIQPQNLW 71
+G P+ W
Sbjct: 468 AALGKLPEGRW 478
>gi|297741429|emb|CBI32560.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RDA + M G A +G ++ F + +RG RP+AVTFV +L+A
Sbjct: 454 RDAVIYNIMTAGYAHHGHENQAIQQFEEMLERGVRPDAVTFVALLSA 500
>gi|242069791|ref|XP_002450172.1| hypothetical protein SORBIDRAFT_05g001460 [Sorghum bicolor]
gi|241936015|gb|EES09160.1| hypothetical protein SORBIDRAFT_05g001460 [Sorghum bicolor]
Length = 521
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSI-EKRGPRPNAVTFVGVLTA 51
MP R+ T ++M+ G KNG + ++LF + E+R RPN TF+ +L+A
Sbjct: 328 MPERNVITWTSMIDGYGKNGLSEEALQLFAEMRERRDVRPNHATFLSILSA 378
>gi|359475162|ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Vitis vinifera]
Length = 670
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RDA + M G A +G ++ F + +RG RP+AVTFV +L+A
Sbjct: 454 RDAVIYNIMTAGYAHHGHENQAIQQFEEMLERGVRPDAVTFVALLSA 500
>gi|255568940|ref|XP_002525440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535253|gb|EEF36930.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 41.6 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P ++ + +AM+ G +++G V LF +++ G +PN VTFVGV++A
Sbjct: 755 IPEKNEISWNAMITGYSQHGCGIEAVNLFQKMKQVGAKPNHVTFVGVISA 804
>gi|224088870|ref|XP_002308572.1| predicted protein [Populus trichocarpa]
gi|222854548|gb|EEE92095.1| predicted protein [Populus trichocarpa]
Length = 433
Score = 41.6 bits (96), Expect = 0.070, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 27/50 (54%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD +T + M+ GLA +G + LF G P VTFVGVL A
Sbjct: 122 MPRRDVSTWNVMICGLASHGLGKDALTLFERFLNEGLHPMNVTFVGVLNA 171
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP RD + + M++ NGK G +E F + + G P+ T V +L+A ++
Sbjct: 21 MPERDVISWNTMLMAYVHNGKLGEALECFKRMRESGLVPDEATLVTMLSASAQL 74
>gi|224079119|ref|XP_002305756.1| predicted protein [Populus trichocarpa]
gi|222848720|gb|EEE86267.1| predicted protein [Populus trichocarpa]
Length = 530
Score = 41.6 bits (96), Expect = 0.070, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
MP R+ + ++M+ G KNG+ +ELF +++ PN VTF+G L+A G
Sbjct: 341 MPVRNVFSWTSMIDGYGKNGEPWEALELFHRMQQCNIEPNYVTFLGALSACG 392
>gi|449519932|ref|XP_004166988.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Cucumis sativus]
Length = 516
Score = 41.2 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 9 TSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
T SAM+LGLA++G +ELF ++ PN VTF+GVL A
Sbjct: 300 TWSAMILGLAQHGFANEAIELFTNMTSSPIVPNHVTFIGVLCA 342
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MPPR + + M+ G A+NG + LF ++ PN VT V VL A +I
Sbjct: 230 MPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARI 283
>gi|347954544|gb|AEP33772.1| organelle transcript processing 82, partial [Draba nemorosa]
Length = 526
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R ++ +AM+ G A +GK +LF + K G P+ +TFVG+L+A
Sbjct: 384 MLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSA 433
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R ++ +AM+ G A +GK +LF + K G P+ +TFVG+L+A
Sbjct: 361 MLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSA 410
>gi|296083925|emb|CBI24313.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + S+++LG +G + ++LF + G +PN VTF+G L+A
Sbjct: 224 MPERDVISWSSIILGYGLSGNVDIALDLFDRMRVAGVKPNDVTFLGALSA 273
>gi|302775096|ref|XP_002970964.1| hypothetical protein SELMODRAFT_95056 [Selaginella moellendorffii]
gi|300160946|gb|EFJ27562.1| hypothetical protein SELMODRAFT_95056 [Selaginella moellendorffii]
Length = 357
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 27/52 (51%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
+P RD +AM+ A NG +ELF + G PNAVTF +L A+
Sbjct: 203 LPDRDVAPWTAMIASYAHNGHGAAALELFQRMALDGSPPNAVTFNTILCAHA 254
>gi|357131531|ref|XP_003567390.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Brachypodium distachyon]
Length = 531
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
DA +A++ GLA +G + + +++F + + RP+ +TFVGVLTA
Sbjct: 341 DAYPYTALISGLATHGHSTLALQVFERMRAQAVRPDPITFVGVLTA 386
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP ++ T +AM+ G A+ G+ + LF +E G P+A T VGV+++ +I
Sbjct: 236 MPGKNLVTWTAMINGYAQCGRPKESISLFRELEAVGIEPDAATMVGVISSASQI 289
>gi|356550078|ref|XP_003543417.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Glycine max]
Length = 315
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ T S MM G +GK G ELF + + G RP+ VTF VL+A
Sbjct: 170 MWQRNEITFSTMMAGYGMHGKCGEVFELFDKMVEAGERPDGVTFTAVLSA 219
>gi|302771964|ref|XP_002969400.1| hypothetical protein SELMODRAFT_91690 [Selaginella moellendorffii]
gi|300162876|gb|EFJ29488.1| hypothetical protein SELMODRAFT_91690 [Selaginella moellendorffii]
Length = 387
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ + +AMM G A+NG + L +++ G RPNA+TFV L +
Sbjct: 127 MPERNLVSWNAMMAGYAQNGDPSSAMVLLKLLDQDGLRPNAITFVVALDS 176
>gi|302774641|ref|XP_002970737.1| hypothetical protein SELMODRAFT_66768 [Selaginella
moellendorffii]
gi|300161448|gb|EFJ28063.1| hypothetical protein SELMODRAFT_66768 [Selaginella
moellendorffii]
Length = 301
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ + +AMM G A+NG + L +++ G RPNA+TFV L +
Sbjct: 48 MPERNLVSWNAMMAGYAQNGDPSSAMVLLKLLDQDGLRPNAITFVVALDS 97
>gi|357125571|ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 600
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD SAM++GLA +G + LF + + RPN VTFVGVL+A
Sbjct: 290 MVERDTKAWSAMIVGLAMHGLAEDALGLFSRMLQLKVRPNNVTFVGVLSA 339
>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
Length = 829
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIK 56
M R+ + SAM+ A+ G G +ELF+ ++ G + NA+TFV VL A ++
Sbjct: 103 MVVRNVVSWSAMIAAYAQRGHPGDALELFVRMDHEGVKANAITFVSVLDACASMR 157
>gi|242082329|ref|XP_002445933.1| hypothetical protein SORBIDRAFT_07g028280 [Sorghum bicolor]
gi|241942283|gb|EES15428.1| hypothetical protein SORBIDRAFT_07g028280 [Sorghum bicolor]
Length = 498
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP-RPNAVTFVGVLTA 51
+MP +D + + M+ G A+ G+ +ELF +++ G RPN VT V VL+A
Sbjct: 280 VMPEKDVVSWTCMISGYAQAGRYAQTLELFRTMQSHGDIRPNEVTMVSVLSA 331
>gi|15228265|ref|NP_190368.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207726|sp|Q9STS9.1|PP268_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g47840
gi|4741201|emb|CAB41867.1| putative protein [Arabidopsis thaliana]
gi|332644818|gb|AEE78339.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 706
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
D + +AM+ G A++GK+ ++LF K G RP++VTF+ VLTA
Sbjct: 476 DIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTA 521
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ + S ++ G A NG++ + LF ++ +G +PN VTF+ VL+A
Sbjct: 297 MPQRNVISWSTVIGGYAVNGESEKALALFSRMKNQGVQPNYVTFLAVLSA 346
>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
Length = 730
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R T ++M+ G +++G+ ++LF + G RPN +TFV +L+A
Sbjct: 414 MPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSA 463
>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
Length = 696
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 12/73 (16%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA---------- 51
MP R+ + +A++ G ++G +ELF+ +E+ G P+ TF +LTA
Sbjct: 154 MPERNTVSWNALIAGYTESGDMASALELFLEMEREGLVPDEATFASLLTAVEGPSCFLMH 213
Query: 52 --YGKIKIFGVTL 62
+GKI +G L
Sbjct: 214 QLHGKIVKYGSAL 226
>gi|357487459|ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355515352|gb|AES96975.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 525
Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA--YGKIKIFG 59
M RD +AM+ G+A +G ++LF +EK G +P+ +TF+ V TA Y + G
Sbjct: 301 MNMRDVVCWNAMISGMAMHGDGKGALKLFYDMEKVGVKPDDITFIAVFTACSYSGMAYEG 360
Query: 60 VTLM 63
+ L+
Sbjct: 361 LMLL 364
>gi|356533546|ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Glycine max]
Length = 483
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVL 49
M ++ + +AM+ GLA NG+ +GV LF + G PN TFVGVL
Sbjct: 300 MASKNVVSWNAMISGLAYNGEGEVGVNLFEEMVHGGFEPNDSTFVGVL 347
>gi|298205132|emb|CBI40653.3| unnamed protein product [Vitis vinifera]
Length = 597
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP RD + ++ G A+NG +EL + +++ G RP+++T V +L A +
Sbjct: 242 MPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADV 295
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFV 46
MM R TT +AM+ G +G +ELF ++K +PN VTF+
Sbjct: 415 MMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFL 460
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP RD + ++ G A+NG +EL + +++ G RP+++T V +L A +
Sbjct: 236 MPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADV 289
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MM R TT +AM+ G +G +ELF ++K +PN VTF+ VL+A
Sbjct: 538 MMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSA 588
>gi|255582129|ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinus communis]
gi|223528509|gb|EEF30537.1| Cell division protein ftsH, putative [Ricinus communis]
Length = 1157
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRG-PRPNAVTFVGVLTA 51
M ++ T SAM+LGLA++G G+ELF+ + + PN VTF+GVL A
Sbjct: 926 MKEKNVWTWSAMILGLAQHGFAKEGLELFLDMMRSSLIHPNYVTFLGVLCA 976
>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
Length = 770
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R T ++M+ G +++G+ ++LF + G RPN +TFV +L+A
Sbjct: 454 MPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSA 503
>gi|357116310|ref|XP_003559925.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
mitochondrial-like [Brachypodium distachyon]
Length = 560
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T +A+++GL NG++ + F ++ + G PN VTF+ VL A
Sbjct: 373 MRDRDVMTWTAIIMGLGVNGQSDAALSQFRAMARDGVAPNEVTFLAVLNA 422
>gi|293331391|ref|NP_001168246.1| uncharacterized protein LOC100382009 [Zea mays]
gi|223946981|gb|ACN27574.1| unknown [Zea mays]
gi|413932359|gb|AFW66910.1| hypothetical protein ZEAMMB73_426189 [Zea mays]
Length = 499
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ + +AM+ GLA NG + L ++ G +PN +TF+G+L+A
Sbjct: 306 MPMRNIYSWNAMITGLAMNGGERQALSLLWKMQMVGVQPNDITFIGLLSA 355
>gi|195614946|gb|ACG29303.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 504
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSI-EKRGPRPNAVTFVGVLTA 51
MP R+ T ++M+ G KNG + ++LF + E+R RPN TF+ +L+A
Sbjct: 329 MPERNVITWTSMIDGYGKNGLSDEALQLFGEMRERRDVRPNHATFLSILSA 379
>gi|357117491|ref|XP_003560501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Brachypodium distachyon]
Length = 652
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP-RPNAVTFVGVLTA 51
M ++ T S+M++GLA +G+ + LF + +R PN VTF+GVLTA
Sbjct: 339 MQEKNVYTYSSMVVGLASHGRAREAIALFKDMVRRADVAPNHVTFIGVLTA 389
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGK 54
DA T S +M GL K G+ G V L +EK+G PN VT+ VL ++ K
Sbjct: 345 DAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCK 393
>gi|357117671|ref|XP_003560587.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Brachypodium distachyon]
Length = 602
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R+ T +AM+ G A+NG + LF + + G RP+ ++F+GVL A
Sbjct: 404 RNTITWNAMIGGFAQNGHAERAINLFNQMVREGARPDYISFIGVLFA 450
>gi|302816274|ref|XP_002989816.1| hypothetical protein SELMODRAFT_130516 [Selaginella moellendorffii]
gi|300142382|gb|EFJ09083.1| hypothetical protein SELMODRAFT_130516 [Selaginella moellendorffii]
Length = 487
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ T +A++ L N ++ +ELF +++ G +PN VTFV + A
Sbjct: 105 MPERNVVTWTALIGALVDNDRDKEAMELFRTMDHSGVKPNDVTFVSTIDA 154
>gi|242094598|ref|XP_002437789.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
gi|241916012|gb|EER89156.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
Length = 623
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ T + MM G K ++ + + LF + G RPN VTF+G L A
Sbjct: 286 MPERNVVTWTTMMNGYLKGKQSELALGLFSGMLMAGTRPNQVTFLGALDA 335
>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R T ++M+ G +++G+ ++LF + G RPN +TFV +L+A
Sbjct: 454 MPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSA 503
>gi|302763621|ref|XP_002965232.1| hypothetical protein SELMODRAFT_82637 [Selaginella
moellendorffii]
gi|300167465|gb|EFJ34070.1| hypothetical protein SELMODRAFT_82637 [Selaginella
moellendorffii]
Length = 186
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + +AM+ A NG + +ELF+++ G P+ VTF VLTA
Sbjct: 32 MPWRDLISWNAMIAVYALNGHHASSLELFLAMAMEGLEPSDVTFSSVLTA 81
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 41.2 bits (95), Expect = 0.080, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVTLMG 64
R++ T SAM+ G A+NG+ +F+ + G P TFVG+L A + G ++G
Sbjct: 289 RNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSDM---GALVVG 345
Query: 65 IQPQNL 70
Q L
Sbjct: 346 KQAHGL 351
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + ++++ G +++G+ ++LF ++ G P+ +TF+ VL A
Sbjct: 489 MPDRDIISWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCA 538
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
P +D SAM+ + +G + +ELF + G RPNAVTFV VL A
Sbjct: 258 PEKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCA 306
>gi|125563703|gb|EAZ09083.1| hypothetical protein OsI_31349 [Oryza sativa Indica Group]
Length = 503
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ T +AM++G A+NG +ELF ++ PN VTF+G+L A
Sbjct: 269 MPARNVWTWTAMIVGFAQNGLAQEALELFDRMKLSKIIPNYVTFLGLLCA 318
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGV 60
MP RD + + ++ G ++NG +EL + ++ G RP+++T V VL A + + V
Sbjct: 208 MPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMV 266
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGV 60
MP RD + + ++ G ++NG +EL + ++ G RP+++T V VL A + + V
Sbjct: 208 MPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMV 266
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M + ++ +AM+ G A +G+ G +LF + K G P+ +TFVG+L+A
Sbjct: 362 MLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSA 411
>gi|253761773|ref|XP_002489261.1| hypothetical protein SORBIDRAFT_0011s003440 [Sorghum bicolor]
gi|241947010|gb|EES20155.1| hypothetical protein SORBIDRAFT_0011s003440 [Sorghum bicolor]
Length = 512
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+MP RD ++M+ GLA +G V+LF G P ++TFVGVL A
Sbjct: 306 VMPKRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLNA 356
>gi|115479131|ref|NP_001063159.1| Os09g0412900 [Oryza sativa Japonica Group]
gi|50251469|dbj|BAD28534.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|50252346|dbj|BAD28379.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113631392|dbj|BAF25073.1| Os09g0412900 [Oryza sativa Japonica Group]
gi|215717103|dbj|BAG95466.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215736827|dbj|BAG95756.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 503
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ T +AM++G A+NG +ELF ++ PN VTF+G+L A
Sbjct: 269 MPARNVWTWTAMIVGFAQNGLAQEALELFDRMKLSKIIPNYVTFLGLLCA 318
>gi|302790445|ref|XP_002976990.1| hypothetical protein SELMODRAFT_105776 [Selaginella moellendorffii]
gi|300155468|gb|EFJ22100.1| hypothetical protein SELMODRAFT_105776 [Selaginella moellendorffii]
Length = 284
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSI-EKRGPRPNAVTFVGVLTAYG 53
M +D + S+M+LG A++G+ +EL + + G RPN VTFV +L A G
Sbjct: 125 MKTQDVVSWSSMILGYAESGRGDTSLELLERMRDDGGLRPNGVTFVSILAACG 177
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 4 PRDATTS-SAMMLGLAKNGKNGMGVELFMSIE----KRGPRPNAVTFVGVLTA 51
PR + S +A++LG A+NG ++LF +E +R RPN VT++ L A
Sbjct: 12 PRKSVVSWNALILGYAENGDAKQALDLFSQMESSSLERSCRPNRVTYLAALKA 64
>gi|357120906|ref|XP_003562165.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Brachypodium distachyon]
Length = 529
Score = 41.2 bits (95), Expect = 0.084, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 8 TTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
++ +AMMLGLA +G+ + LF +E G P+ VTF+ +L AYG
Sbjct: 342 SSWNAMMLGLAVHGQCQEALALFSELETYGLSPDNVTFITILMAYG 387
>gi|357481329|ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512285|gb|AES93908.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 831
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MMP ++ T + M+ G A NG V L+ + G +P+ +TFV VLTA
Sbjct: 579 MMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTA 629
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD S MM+ A +G + +F ++K+G +P+ VTF+GVL A
Sbjct: 300 MESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYA 349
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD S MM+ A +G + +F ++K+G +P+ VTF+GVL A
Sbjct: 300 MESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYA 349
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVTLMG 64
R++ T SAM+ G A+NG+ V +F + G P TFVGVL A + G +G
Sbjct: 284 RNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDL---GALAVG 340
Query: 65 IQPQNL 70
Q L
Sbjct: 341 KQAHGL 346
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P RD ++++ G ++NG ++LF ++ G P+ +TF+ +L A
Sbjct: 483 IPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCA 532
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD S MM+ A +G + +F ++K+G +P+ VTF+GVL A
Sbjct: 300 MESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYA 349
>gi|295828390|gb|ADG37864.1| AT1G13410-like protein [Capsella grandiflora]
Length = 185
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVTLMG 64
RD + + M+ GLA +G ++LF ++ G RP+ VTFVGVL A MG
Sbjct: 30 RDLISWNTMINGLAAHGHGTEALDLFHEMKNCGIRPDKVTFVGVLCACKH--------MG 81
Query: 65 IQPQNLWYY 73
+ L Y+
Sbjct: 82 LVEDGLAYF 90
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T + ++ GL +NG+ ++ + ++ G RPNA TFV VL+A
Sbjct: 493 MSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSA 542
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R +AM++GLA++G + F ++ RG P+ VTF+GVL+A
Sbjct: 662 MNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSA 711
>gi|222624644|gb|EEE58776.1| hypothetical protein OsJ_10296 [Oryza sativa Japonica Group]
Length = 419
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA--YGKIKIFG 59
MP R T ++M+ GLA +G V LF + + G +P+ +TF VLTA YG + G
Sbjct: 233 MPQRSTVTWNSMIFGLANSGHCQEAVGLFDRMLRDGAKPDHLTFTAVLTACSYGGMVEVG 292
Query: 60 VTL-------MGIQPQ 68
L G++P+
Sbjct: 293 KILYRAMQVEYGVEPR 308
>gi|295828392|gb|ADG37865.1| AT1G13410-like protein [Capsella grandiflora]
Length = 185
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVTLMG 64
RD + + M+ GLA +G ++LF ++ G RP+ VTFVGVL A MG
Sbjct: 30 RDLISWNTMINGLAAHGHGTEALDLFHEMKNCGIRPDKVTFVGVLCACKH--------MG 81
Query: 65 IQPQNLWYY 73
+ L Y+
Sbjct: 82 LVEDGLAYF 90
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 41.2 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGK 54
DA T S +M GL K G+ G V L +EK+G PN VT+ VL ++ K
Sbjct: 329 DAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCK 377
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 41.2 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
P +D + +AM+ GL+ NG+ +ELF + G P+ VTFV +++A
Sbjct: 485 PNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISA 533
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
R++ T SAM+ G ++NG++ V+LF + G +P+ T VGVL A I
Sbjct: 285 RNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDI 335
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 41.2 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
M RD + +AM++G A+NG+ + LF + RP++VT +GVL+A G
Sbjct: 448 MAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSACG 499
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 41.2 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVTLMG 64
R++ T SAM+ G A+NG+ V +F + G P TFVGVL A + G +G
Sbjct: 284 RNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDL---GALAVG 340
Query: 65 IQPQNL 70
Q L
Sbjct: 341 KQAHGL 346
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P RD ++++ G ++NG ++LF ++ G P+ +TF+ +L A
Sbjct: 483 IPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCA 532
>gi|225451344|ref|XP_002274803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18970
[Vitis vinifera]
gi|298204853|emb|CBI34160.3| unnamed protein product [Vitis vinifera]
Length = 471
Score = 41.2 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ T +AM+ GLA++G+ +EL + G +PNAVTF + +A
Sbjct: 277 MKERNVLTWTAMITGLARHGRGKEALELLDEMVAYGVKPNAVTFTSLFSA 326
>gi|345288649|gb|AEN80816.1| AT1G13410-like protein, partial [Capsella rubella]
gi|345288651|gb|AEN80817.1| AT1G13410-like protein, partial [Capsella rubella]
gi|345288653|gb|AEN80818.1| AT1G13410-like protein, partial [Capsella rubella]
gi|345288655|gb|AEN80819.1| AT1G13410-like protein, partial [Capsella rubella]
gi|345288657|gb|AEN80820.1| AT1G13410-like protein, partial [Capsella rubella]
gi|345288659|gb|AEN80821.1| AT1G13410-like protein, partial [Capsella rubella]
gi|345288661|gb|AEN80822.1| AT1G13410-like protein, partial [Capsella rubella]
gi|345288663|gb|AEN80823.1| AT1G13410-like protein, partial [Capsella rubella]
Length = 195
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVTLMG 64
RD + + M+ GLA +G ++LF ++ G RP+ VTFVGVL A MG
Sbjct: 36 RDLISWNTMINGLAAHGHGTEALDLFHEMKNCGIRPDKVTFVGVLCACKH--------MG 87
Query: 65 IQPQNLWYY 73
+ L Y+
Sbjct: 88 LVEDGLAYF 96
>gi|295828396|gb|ADG37867.1| AT1G13410-like protein [Capsella grandiflora]
Length = 185
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVTLMG 64
RD + + M+ GLA +G ++LF ++ G RP+ VTFVGVL A MG
Sbjct: 30 RDLISWNTMINGLAAHGHGTEALDLFHEMKNCGIRPDKVTFVGVLCACKH--------MG 81
Query: 65 IQPQNLWYY 73
+ L Y+
Sbjct: 82 LVEDGLAYF 90
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 41.2 bits (95), Expect = 0.091, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ T +A++ G A +G+ +ELF + + G RP+++TF+ VL A
Sbjct: 369 MNERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHA 418
>gi|125605677|gb|EAZ44713.1| hypothetical protein OsJ_29343 [Oryza sativa Japonica Group]
Length = 505
Score = 41.2 bits (95), Expect = 0.091, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ T +AM++G A+NG +ELF ++ PN VTF+G+L A
Sbjct: 271 MPARNVWTWTAMIVGFAQNGLAQEALELFDRMKLSKIIPNYVTFLGLLCA 320
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ + + M+ G A NG+ + +F + G PN +TFV +LTA
Sbjct: 552 MPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTA 601
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
P ++A SAM+ G ++N K ++LF + +RG P T V VL+A G++
Sbjct: 451 PRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQL 503
>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 788
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D + + M++G A +G+ +E+F ++ G RPN TFV VLTA
Sbjct: 474 MAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTA 523
>gi|326512500|dbj|BAJ99605.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 621
Score = 40.8 bits (94), Expect = 0.093, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGK 54
MP R + +AMM G K+G +G V LF+ + G R N+++FV +L + G+
Sbjct: 147 MPERTVVSWTAMMNGYQKSGNHGEVVRLFLDMIASGERGNSLSFVCLLKSCGE 199
>gi|297738072|emb|CBI27273.3| unnamed protein product [Vitis vinifera]
Length = 340
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D + + M+ GLA +G M +ELF + G P+ +TFVGVL+A
Sbjct: 128 KDIISWNVMIGGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSA 174
>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
Length = 629
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVTLMG 64
R++ T SAM+ G A+NG+ V +F + G P TFVGVL A + G +G
Sbjct: 178 RNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDL---GALAVG 234
Query: 65 IQPQNL 70
Q L
Sbjct: 235 KQAHGL 240
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P RD ++++ G ++NG ++LF ++ G P+ +TF+ +L A
Sbjct: 377 IPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCA 426
>gi|8920616|gb|AAF81338.1|AC007767_18 Contains similarity to a hypothetical protein F19I3.26 gi|7485810
from Arabidopsis thaliana BAC F19I3 gb|AC004238. It
contains a PPR repeat domain PF|01535. ESTs gb|AV539170,
gb|AV551571, gb|AA597781, gb|AV544524, gb|AV531577 and
gb|AV533492 come from this gene [Arabidopsis thaliana]
Length = 864
Score = 40.8 bits (94), Expect = 0.095, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D + ++M++GL+ +G + LF + G +PN+VTF+GVL+A
Sbjct: 632 MVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSA 681
>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 621
Score = 40.8 bits (94), Expect = 0.095, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP D + ++++ G A+NG+ ++ F + K G +P+ +TFVGVL+A
Sbjct: 384 MPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSA 433
>gi|295828398|gb|ADG37868.1| AT1G13410-like protein [Capsella grandiflora]
Length = 185
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVTLMG 64
RD + + M+ GLA +G ++LF ++ G RP+ VTFVGVL A MG
Sbjct: 30 RDLISWNTMINGLAAHGHGTEALDLFHEMKNCGIRPDKVTFVGVLCACKH--------MG 81
Query: 65 IQPQNLWYY 73
+ L Y+
Sbjct: 82 LVEDGLAYF 90
>gi|295828394|gb|ADG37866.1| AT1G13410-like protein [Capsella grandiflora]
Length = 185
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVTLMG 64
RD + + M+ GLA +G ++LF ++ G RP+ VTFVGVL A MG
Sbjct: 30 RDLISWNTMINGLAAHGHGTEALDLFHEMKNCGIRPDKVTFVGVLCACKH--------MG 81
Query: 65 IQPQNLWYY 73
+ L Y+
Sbjct: 82 LVEDGLAYF 90
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 40.8 bits (94), Expect = 0.096, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
M RD SAM++GLA +G + ++ F + +PN VTF+GVL+A I
Sbjct: 329 MNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHI 382
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 40.8 bits (94), Expect = 0.096, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P RD T +AM+ G A+ G + ++LF ++++G +P+ +TF LT+
Sbjct: 359 LPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTS 408
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ +AM+ G A++G+ +E F ++K+G +P+ VTF VL+A
Sbjct: 460 MSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSA 509
>gi|449461643|ref|XP_004148551.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Cucumis sativus]
Length = 516
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 9 TSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
T SAM+LGLA++G +ELF ++ PN VTF+GVL A
Sbjct: 300 TWSAMILGLAQHGFANEAIELFTNMMSSPIVPNHVTFIGVLCA 342
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
DA +A++ G A G ++LF ++ G RPNAVTF+ VLTA
Sbjct: 378 DAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTA 423
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD SAM+ GL +G+ ++LF +++ +PN+VTF VL A
Sbjct: 424 RDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCA 470
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGK 54
+D + ++M+ A+ +ELF+ +E+ PN+VT VGVL+A K
Sbjct: 190 KDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAK 239
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGV 60
MP ++ T +AM+ GLA G+ ++ F ++ +G +P+ VT VGVL + + + +
Sbjct: 274 MPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEI 332
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + +AM+ GLA +G+ ++F + + G PN VTF+G+L A
Sbjct: 375 MKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMA 424
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P ++A T ++M+ GLA +G +E F + G +P+ +TF+GVL+A
Sbjct: 417 IPVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSA 466
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP RD +A+M G +N + + LF ++K PN +T V +L+A ++ G
Sbjct: 316 MPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQL---GAL 372
Query: 62 LMGIQPQNLW--YYID 75
MG +W +YID
Sbjct: 373 EMG-----MWVHHYID 383
>gi|357431684|gb|AET78519.1| At1g59720-like protein [Arabidopsis halleri]
Length = 163
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP--RPNAVTFVGVLTA 51
M RD + +AM+LGLA +G+ ++ F + K G +PN+VTFV +L A
Sbjct: 65 MQKRDLASWNAMILGLATHGRAEEALDCFDCMVKEGKNVKPNSVTFVALLIA 116
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 40.8 bits (94), Expect = 0.100, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R + +AM++GLA++G ++ F ++ RG P+ VTF+GVL+A
Sbjct: 1303 RRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSA 1349
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 40.8 bits (94), Expect = 0.100, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIF 58
+P RD + ++M+ + G +ELF +E + +PN +T VGVL+A K F
Sbjct: 197 IPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDF 253
Score = 37.7 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D SAM+ GLA +G + LF +++ +PNAVTF +L A
Sbjct: 434 KDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCA 480
>gi|115469684|ref|NP_001058441.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|53791823|dbj|BAD53889.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|53792844|dbj|BAD53877.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113596481|dbj|BAF20355.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|125598347|gb|EAZ38127.1| hypothetical protein OsJ_22476 [Oryza sativa Japonica Group]
Length = 648
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP-RPNAVTFVGVLTA 51
M ++ T S+M+ GLA +G+ + LF + R PN VTF+GVLTA
Sbjct: 335 MQEKNVYTYSSMIAGLASHGRASEAIALFKEMVNRANVEPNHVTFIGVLTA 385
>gi|359490432|ref|XP_002267810.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 499
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP R+A + +AM+ +NGK ++LF+ ++ G + TFV VL+A + I G T
Sbjct: 271 MPCRNAVSWNAMISSYTQNGKYEKSLDLFVKMQLEGVDSDGFTFVSVLSACSNLAIHGRT 330
>gi|326528959|dbj|BAJ97501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 514
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 31/46 (67%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
D T +A+++G A+NG+ +E++ + + G RP+ VTF+G+L A
Sbjct: 207 DPITWTALIVGYAQNGRGRESLEIYADMVRSGCRPDYVTFIGLLFA 252
>gi|242059647|ref|XP_002458969.1| hypothetical protein SORBIDRAFT_03g043550 [Sorghum bicolor]
gi|241930944|gb|EES04089.1| hypothetical protein SORBIDRAFT_03g043550 [Sorghum bicolor]
Length = 530
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P DA +A++ GLA +G + + +F ++ + +P+ +TFVGVLTA
Sbjct: 338 IPQPDAYPYTALISGLATHGHEKLALSVFERMQVQAVKPDPITFVGVLTA 387
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MM R TT +AM+ G +G +ELF ++K +PN VTF+ V++A
Sbjct: 498 MMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISA 548
Score = 37.7 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGV 60
MP RD + + ++ G ++NG M +E+ S+ + +P+ +T V VL A +++ V
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV 254
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKI 57
R + +AM+LG A+NG+ + F + R +P+ T+V V+TA ++ I
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSI 453
>gi|147817099|emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]
Length = 2076
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ +AM++G+A++G V LF S++ G P+ V+F+G+L+A
Sbjct: 628 MNVRNIVLWNAMLVGIAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSA 677
>gi|356557599|ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
mitochondrial-like [Glycine max]
Length = 601
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD T S+++ +G +++F + +RG +P+A+TF+ VL+A
Sbjct: 417 MPNRDNVTWSSLISAYGLHGCGEQALQIFYEMNERGVKPDAITFLAVLSA 466
>gi|255546694|ref|XP_002514406.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546503|gb|EEF48002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 436
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D + S M+ G A+NG + ++LF S++ G +PN +T +GVL A
Sbjct: 315 MVEKDVISWSTMIAGFAQNGYSREALKLFESMKVSGTKPNYITILGVLFA 364
>gi|218201434|gb|EEC83861.1| hypothetical protein OsI_29841 [Oryza sativa Indica Group]
Length = 595
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D ++M++GLAK+G V+LF ++ G P+ V FVGVLTA
Sbjct: 326 KDLMAWTSMIIGLAKHGHGKDAVQLFNQMQHGGVVPDHVAFVGVLTA 372
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M + + +AM+ GLA +G+ ELF + G PN +TFVG+L+A
Sbjct: 423 MKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSA 472
>gi|296082095|emb|CBI21100.3| unnamed protein product [Vitis vinifera]
Length = 278
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ T +A++ G A +G+ +ELF + + G RP+++TF+ VL A
Sbjct: 48 MNERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHA 97
>gi|225466196|ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI------ 55
M RD ++++ GLA +G + +E+F ++ G PN VTF+ +L+A ++
Sbjct: 306 MLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEG 365
Query: 56 -KIFG--VTLMGIQP 67
+IF + GI+P
Sbjct: 366 LRIFKSMTNIYGIEP 380
Score = 39.3 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP ++A + SAM+ G A+ G +ELF ++ G RPN VG LTA
Sbjct: 205 MPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTA 254
>gi|296085795|emb|CBI31119.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI------ 55
M RD ++++ GLA +G + +E+F ++ G PN VTF+ +L+A ++
Sbjct: 281 MLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEG 340
Query: 56 -KIFG--VTLMGIQP 67
+IF + GI+P
Sbjct: 341 LRIFKSMTNIYGIEP 355
Score = 39.3 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP ++A + SAM+ G A+ G +ELF ++ G RPN VG LTA
Sbjct: 180 MPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTA 229
>gi|29893615|gb|AAP06869.1| chloroplast import-associated channel protein homolog [Oryza sativa
Japonica Group]
Length = 1273
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA--YGKIKIFG 59
MP R T ++M+ GLA +G V LF + + G +P+ +TF VLTA YG + G
Sbjct: 1087 MPQRSTVTWNSMIFGLANSGHCQEAVGLFDRMLRDGAKPDHLTFTAVLTACSYGGMVEVG 1146
Query: 60 VTL-------MGIQPQ 68
L G++P+
Sbjct: 1147 KILYRAMQVEYGVEPR 1162
>gi|359486281|ref|XP_003633424.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g45350, chloroplastic-like [Vitis vinifera]
Length = 704
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 11 SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+A++ GLA +G + ELFM +EK +PN +TF+GVL A
Sbjct: 414 NAILSGLAIHGLGEVAFELFMEMEKLFVKPNDITFIGVLNA 454
>gi|296082479|emb|CBI21484.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTF 45
RD +AM++G +NG N +ELF S+ K GP+PN T
Sbjct: 240 RDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTL 280
>gi|414883627|tpg|DAA59641.1| TPA: hypothetical protein ZEAMMB73_113196 [Zea mays]
Length = 637
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD ++M+ GLA +G V+LF G P ++TFVGVL A
Sbjct: 326 MPRRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLNA 375
>gi|302780189|ref|XP_002971869.1| hypothetical protein SELMODRAFT_96329 [Selaginella moellendorffii]
gi|300160168|gb|EFJ26786.1| hypothetical protein SELMODRAFT_96329 [Selaginella moellendorffii]
Length = 614
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R + T +AM+ A+NG+ + LF++++ G N+VTFV + A
Sbjct: 96 MPERSSVTWTAMITAYAQNGRPRAAIHLFLAMDCEGFPANSVTFVTIFDA 145
>gi|297729191|ref|NP_001176959.1| Os12g0490100 [Oryza sativa Japonica Group]
gi|255670316|dbj|BAH95687.1| Os12g0490100 [Oryza sativa Japonica Group]
Length = 451
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 32/48 (66%)
Query: 4 PRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
P+D + + M++ A++G ++LF ++ G +P+AVTF+GVL+A
Sbjct: 237 PKDTVSYNVMIIAFAQHGHARDALDLFNAMVDSGLQPDAVTFLGVLSA 284
>gi|222640847|gb|EEE68979.1| hypothetical protein OsJ_27898 [Oryza sativa Japonica Group]
Length = 596
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D ++M++GLAK+G V+LF ++ G P+ V FVGVLTA
Sbjct: 327 KDLMAWTSMIIGLAKHGHGKDAVQLFNQMQHGGVVPDHVAFVGVLTA 373
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M D + +A+++G A+ GK ++LF + +G +P+ VTF+GVL+A
Sbjct: 439 MSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSA 488
>gi|347954510|gb|AEP33755.1| chloroplast biogenesis 19, partial [Olimarabidopsis pumila]
Length = 475
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 39/80 (48%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M R + +++++G A NG + F +++ G +PNAVTF G LTA + +
Sbjct: 242 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPNAVTFTGALTACSHVGLVDEG 301
Query: 62 LMGIQPQNLWYYIDGQIDAW 81
L Q Y I +I+ +
Sbjct: 302 LRFFQSMKRDYNISPRIEHY 321
>gi|15231572|ref|NP_189286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273843|sp|Q9LRV2.1|PP256_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g26540
gi|9293933|dbj|BAB01836.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643655|gb|AEE77176.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 700
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD ++++ G +NG++ ELFM +E G +P+ VTF+G+L A
Sbjct: 560 RDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQA 606
>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 768
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVTLMG 64
RD + S++++G A+ G ++LF + G +PN VTFVGVL A ++ G
Sbjct: 516 RDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIACSRV--------G 567
Query: 65 IQPQNLWYY 73
+ + +YY
Sbjct: 568 LVDEGCYYY 576
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTF 45
RD +AM++G +NG N +ELF S+ K GP+PN T
Sbjct: 375 RDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTL 415
Score = 39.3 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVTLMG 64
RD T ++M++ LA++G + LF + + G +P+ +T+VGVL+A T +G
Sbjct: 477 RDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSA--------CTHVG 528
Query: 65 IQPQNLWYY 73
+ Q YY
Sbjct: 529 LVEQGRSYY 537
>gi|226499544|ref|NP_001141715.1| uncharacterized protein LOC100273844 [Zea mays]
gi|194705652|gb|ACF86910.1| unknown [Zea mays]
Length = 375
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVTLMG 64
RD + S++++G A+ G ++LF + G +PN VTFVGVL A ++ G
Sbjct: 123 RDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIACSRV--------G 174
Query: 65 IQPQNLWYY 73
+ + +YY
Sbjct: 175 LVDEGCYYY 183
>gi|413953302|gb|AFW85951.1| hypothetical protein ZEAMMB73_518426 [Zea mays]
Length = 620
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ T + MM G K ++ + + LF + G RPN VTF+G L A
Sbjct: 284 MPERNVVTWTTMMNGYLKGKQSELSLGLFRGMLMSGIRPNQVTFLGALDA 333
>gi|255685040|gb|ACU28009.1| At1g59720-like protein [Arabidopsis thaliana]
Length = 137
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 10/74 (13%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF--MSIEKRGPRPNAVTFVGVLTAYGKIKIFG 59
M RD + +AM+LG A +G+ + F M ++ RPN+VTFVG+L A
Sbjct: 32 MQKRDLASWNAMILGFATHGRAEEAMNCFDCMVDKRESVRPNSVTFVGLLIACNH----- 86
Query: 60 VTLMGIQPQNLWYY 73
G+ + WY+
Sbjct: 87 ---RGLVNKGRWYF 97
>gi|302761660|ref|XP_002964252.1| hypothetical protein SELMODRAFT_82268 [Selaginella moellendorffii]
gi|300167981|gb|EFJ34585.1| hypothetical protein SELMODRAFT_82268 [Selaginella moellendorffii]
Length = 740
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP +D + SAM+ ++NG G + ++ ++++G +P+ V F+ VL+A
Sbjct: 475 MPVKDVFSYSAMIGAYSQNGCEGRAMTIYAEMDQQGIKPDEVAFISVLSA 524
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIK 56
M R+ + ++++ G AK G V LF + + G RPN+VT VGV++A K++
Sbjct: 200 MSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQ 254
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD SAM++G +G+ + L+ ++E+ G PN VTF+G+L A
Sbjct: 387 RDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMA 433
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD SAM++G +G+ + L+ ++E+ G PN VTF+G+L A
Sbjct: 387 RDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMA 433
>gi|449519292|ref|XP_004166669.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g15690-like [Cucumis sativus]
Length = 588
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R + MM G A NG G+ELF +++ G +PN+ TF+ V++A
Sbjct: 304 MPDRSIDSWHLMMKGYADNGLGDEGLELFENMKNLGLQPNSQTFLYVMSA 353
>gi|326522825|dbj|BAJ88458.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD S M++ A + + LF ++K+G RP+AVTF+GVL A
Sbjct: 286 MESRDRQAWSVMIVAYANHSYGREAISLFEEMKKQGIRPDAVTFLGVLYA 335
>gi|218192520|gb|EEC74947.1| hypothetical protein OsI_10926 [Oryza sativa Indica Group]
Length = 469
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA--YG 53
MP R T ++M+ GLA +G V LF + + G +P+ +TF VLTA YG
Sbjct: 283 MPQRSTVTWNSMIFGLANSGHCQEAVGLFDRMLRDGAKPDHLTFTAVLTACSYG 336
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA--YGKIKIFG 59
M RD +AM+ G A++G + LF ++ G PN +TFV VLTA + + FG
Sbjct: 302 MHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVVVLTACIHTGLCDFG 361
Query: 60 VT-------LMGIQPQ 68
+ L GI+P+
Sbjct: 362 IQCFEGMQELYGIEPR 377
>gi|297720639|ref|NP_001172681.1| Os01g0884800 [Oryza sativa Japonica Group]
gi|20161229|dbj|BAB90156.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|255673935|dbj|BAH91411.1| Os01g0884800 [Oryza sativa Japonica Group]
Length = 517
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R A T +A+++G A+NG+ + ++ + + G RP+ VTFVG+L A
Sbjct: 205 MRSRCAITWTALIVGYAQNGRGRESLAVYADMARSGCRPDYVTFVGLLFA 254
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 29/41 (70%)
Query: 11 SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+AM++GLA++G ++ F ++ RG P+ VTF+GVL+A
Sbjct: 1280 NAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSA 1320
>gi|125572887|gb|EAZ14402.1| hypothetical protein OsJ_04322 [Oryza sativa Japonica Group]
Length = 490
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R A T +A+++G A+NG+ + ++ + + G RP+ VTFVG+L A
Sbjct: 178 MRSRCAITWTALIVGYAQNGRGRESLAVYADMARSGCRPDYVTFVGLLFA 227
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTF---VGVLTAYGKIKI 57
D T +A++ L K+G+ LF S+E RG +PNAVTF + L GK+ I
Sbjct: 286 DQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDI 340
>gi|108707417|gb|ABF95212.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 469
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA--YGKIKIFG 59
MP R T ++M+ GLA +G V LF + + G +P+ +TF VLTA YG + G
Sbjct: 283 MPQRSTVTWNSMIFGLANSGHCQEAVGLFDRMLRDGAKPDHLTFTAVLTACSYGGMVEVG 342
Query: 60 VTL-------MGIQPQ 68
L G++P+
Sbjct: 343 KILYRAMQVEYGVEPR 358
>gi|302781642|ref|XP_002972595.1| hypothetical protein SELMODRAFT_97496 [Selaginella moellendorffii]
gi|300160062|gb|EFJ26681.1| hypothetical protein SELMODRAFT_97496 [Selaginella moellendorffii]
Length = 606
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 9 TSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
T S+M++ A+NG G ++LF S+E+ G +P++VTF VL A
Sbjct: 302 TFSSMVVAYARNGHFGDALKLFWSMEQDGYKPDSVTFTHVLYA 344
>gi|302815759|ref|XP_002989560.1| hypothetical protein SELMODRAFT_129917 [Selaginella moellendorffii]
gi|300142738|gb|EFJ09436.1| hypothetical protein SELMODRAFT_129917 [Selaginella moellendorffii]
Length = 744
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP +D + SAM+ ++NG G + ++ ++++G +P+ V F+ VL+A
Sbjct: 475 MPVKDVFSYSAMIGAYSQNGCEGRAMTIYAEMDQQGIKPDEVAFISVLSA 524
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF--MSIEKRGPRPNAVTFVGVLTA 51
M +D + +AM+ A+NG+ + +EL+ M +EKR RP+ VT+ VL A
Sbjct: 271 MANKDVVSWTAMITAYAQNGRERLALELYRRMELEKR-VRPDRVTYAAVLGA 321
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 32/46 (69%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
D + +AM+ G A++G + ++LF I + G RP++VTF+GVL+A
Sbjct: 484 DIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSA 529
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 32/46 (69%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
D + +AM+ G A++G + ++LF I + G RP++VTF+GVL+A
Sbjct: 484 DIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSA 529
>gi|115477230|ref|NP_001062211.1| Os08g0511000 [Oryza sativa Japonica Group]
gi|42407533|dbj|BAD10739.1| selenium binding protein-like protein [Oryza sativa Japonica Group]
gi|113624180|dbj|BAF24125.1| Os08g0511000 [Oryza sativa Japonica Group]
gi|215741604|dbj|BAG98099.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 512
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D ++M++GLAK+G V+LF ++ G P+ V FVGVLTA
Sbjct: 326 KDLMAWTSMIIGLAKHGHGKDAVQLFNQMQHGGVVPDHVAFVGVLTA 372
>gi|404352368|gb|AFR61182.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
Length = 202
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF--MSIEKRGPRPNAVTFVGVLTA 51
M RD + +AM+LG A +G+ ++ F M E + +PN+VTFV VL A
Sbjct: 86 MQKRDLASWNAMILGFATHGRAEEALDCFDRMVKESKNVKPNSVTFVAVLIA 137
>gi|359478768|ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 590
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
++P + +AMM G A+ G VELF S+E RG P+ +F+ +LT+
Sbjct: 273 LLPSLNEVAWNAMMAGYAQQGDQRSVVELFNSMEARGLVPDEYSFLAILTS 323
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
P +D SAM+ GLA +G V LF + +G RPNAVTF+ V A
Sbjct: 231 PNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCA 279
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
+MP R+ + ++M+ G A++G + LF ++ G P+ +TFVGVL+A I
Sbjct: 468 LMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHI 522
>gi|115452179|ref|NP_001049690.1| Os03g0271300 [Oryza sativa Japonica Group]
gi|113548161|dbj|BAF11604.1| Os03g0271300, partial [Oryza sativa Japonica Group]
Length = 484
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA--YGKIKIFG 59
MP R T ++M+ GLA +G V LF + + G +P+ +TF VLTA YG + G
Sbjct: 298 MPQRSTVTWNSMIFGLANSGHCQEAVGLFDRMLRDGAKPDHLTFTAVLTACSYGGMVEVG 357
Query: 60 VTL-------MGIQPQ 68
L G++P+
Sbjct: 358 KILYRAMQVEYGVEPR 373
>gi|356510940|ref|XP_003524191.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g25580-like [Glycine max]
Length = 664
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ TT M+ LAKNG ++LF + G +P+ F+GVL A
Sbjct: 362 MPERNLTTWDTMITQLAKNGFAEDSIDLFTQFKNLGLKPDGQMFIGVLFA 411
>gi|108862694|gb|ABA98288.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 572
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 32/48 (66%)
Query: 4 PRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
P+D + + M++ A++G ++LF ++ G +P+AVTF+GVL+A
Sbjct: 344 PKDTVSYNVMIIAFAQHGHARDALDLFNAMVDSGLQPDAVTFLGVLSA 391
>gi|356514477|ref|XP_003525932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 526
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVTLMG 64
+DA +AM+ G A NG G ++LF + +PN TFV VLTA K+
Sbjct: 306 KDAGAWNAMISGEALNGDAGKSLQLFRQMAASRTKPNETTFVAVLTACTHAKMV------ 359
Query: 65 IQPQNLWYY 73
Q LW +
Sbjct: 360 --QQGLWLF 366
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD SAM++G +G+ + L+ ++E+ G PN VTF+G+L A
Sbjct: 387 RDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIA 433
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P + ++ + M+ GLA +GK +ELF +E+ P+ +TFV VL+A
Sbjct: 258 LPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSA 307
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P + ++ + M+ GLA +GK +ELF +E+ P+ +TFV VL+A
Sbjct: 313 LPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSA 362
>gi|159480198|ref|XP_001698171.1| protein with PPR repeats [Chlamydomonas reinhardtii]
gi|158273669|gb|EDO99456.1| protein with PPR repeats [Chlamydomonas reinhardtii]
Length = 160
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 4 PRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGK 54
PR+ T SA+M K G++ ++++ +++ G RPN VTF ++ YGK
Sbjct: 7 PRNVHTFSALMNVCIKAGQHQAALDVWRELQEAGCRPNVVTFNTLIDVYGK 57
>gi|147798551|emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]
Length = 690
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 11 SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+A++ GLA +G + ELFM +EK +PB +TF+GVL A
Sbjct: 467 NAIJXGLAIHGLGEVAFELFMEMEKLFVKPBDITFIGVLNA 507
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P RD + +A++ G A+ G + ++LF +++ G R N VT+ VLTA
Sbjct: 639 LPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTA 688
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF-MSIEKRGPRPNAVTFVGVLTA 51
MP R + +AM++G +K+G VELF + E+ +P++VTF+ VL+
Sbjct: 740 MPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSG 790
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ + +AM+ G ++ G + LF+ + G PN TF VLT+
Sbjct: 538 MPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTS 587
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P RD + +A++ G A+ G + ++LF +++ G R N VT+ VLTA
Sbjct: 172 LPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTA 221
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF-MSIEKRGPRPNAVTFVGVLTA 51
MP R + +AM++G +K+G VELF + E+ +P++VTF+ VL+
Sbjct: 273 MPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSG 323
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ + +AM+ G ++ G + LF+ + G PN TF VLT+
Sbjct: 71 MPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTS 120
>gi|255547019|ref|XP_002514567.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546171|gb|EEF47673.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 515
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD + +A++ G A+ GK +ELF + G +P+AVTF+GVL A
Sbjct: 438 RDEVSWTALISGYAQFGKARETIELFERMLAHGLKPDAVTFIGVLLA 484
>gi|255572686|ref|XP_002527276.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533369|gb|EEF35120.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 507
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVL 49
M R+ T ++M++G + +GK+ +ELF + K+G P +VTFV L
Sbjct: 428 MKERNVITYNSMIVGFSLHGKSSEAIELFRGMTKQGLEPTSVTFVDKL 475
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
+D +A++ GL +NG+ +E+F +++ RPN VT V VL+A ++
Sbjct: 330 KDTVCWTAVIDGLVRNGEMNRALEVFREMQREDVRPNEVTIVCVLSACSQL 380
>gi|414883628|tpg|DAA59642.1| TPA: hypothetical protein ZEAMMB73_113196, partial [Zea mays]
Length = 635
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD ++M+ GLA +G V+LF G P ++TFVGVL A
Sbjct: 326 MPRRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLNA 375
>gi|302763765|ref|XP_002965304.1| hypothetical protein SELMODRAFT_82521 [Selaginella moellendorffii]
gi|302790772|ref|XP_002977153.1| hypothetical protein SELMODRAFT_106523 [Selaginella moellendorffii]
gi|300155129|gb|EFJ21762.1| hypothetical protein SELMODRAFT_106523 [Selaginella moellendorffii]
gi|300167537|gb|EFJ34142.1| hypothetical protein SELMODRAFT_82521 [Selaginella moellendorffii]
Length = 192
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGK------- 54
+P + + + ++ G A+NG + +ELF ++ G P+ VTF+G+LTA +
Sbjct: 32 IPEPNVYSWTTLLQGYAENGCEEVAIELFQEMDLSGVEPDEVTFLGLLTALCQVGKLEDC 91
Query: 55 -IKIFGVTLMGIQPQNLWY 72
I+ ++ G++P + Y
Sbjct: 92 LIQFASMSERGLRPSSEHY 110
>gi|242075864|ref|XP_002447868.1| hypothetical protein SORBIDRAFT_06g017180 [Sorghum bicolor]
gi|241939051|gb|EES12196.1| hypothetical protein SORBIDRAFT_06g017180 [Sorghum bicolor]
Length = 714
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
D ++M+ A N K G+ELF + K+G RP++VTF+G L +
Sbjct: 552 DVILWNSMIFACAYNSKGDYGLELFDEMRKQGIRPDSVTFLGALVS 597
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + S M+ G A+ ++ + +ELF + G +PN VT V V +A
Sbjct: 625 MPERDVFSWSTMISGYAQTDQSRIALELFHKMVASGIKPNEVTMVSVFSA 674
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 5 RDATTS----SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD T S +A++ GLA +G M +++F +++ +PN +TF+GVL+A
Sbjct: 727 RDKTFSVSPWNAIICGLASHGHASMCLDVFSDMQRYNIKPNPITFIGVLSA 777
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R +T +AM+ G A +G+ ++F + K G P+ +TFVG+L+A
Sbjct: 377 RSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSA 423
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGV 60
MMP R+ + +++M G A +GK + +F +++ G +P+ V+F VL+A + G+
Sbjct: 404 MMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQ---GGL 460
Query: 61 TLMGIQPQNLWYYID 75
T G W+Y D
Sbjct: 461 TEEG------WFYFD 469
>gi|356564808|ref|XP_003550640.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37320-like [Glycine max]
Length = 501
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA--------YG 53
M RD T + M+ G A++G + LF + K+G P+AVT++GVL++ G
Sbjct: 269 MVSRDVVTWNTMISGYAQHGLAQEAINLFEEMIKQGVNPDAVTYLGVLSSCRHGGLVKEG 328
Query: 54 KIKIFGVTLMGIQP 67
++ + G+QP
Sbjct: 329 QVYFNSMVEHGVQP 342
>gi|297605095|ref|NP_001056652.2| Os06g0125600 [Oryza sativa Japonica Group]
gi|255676676|dbj|BAF18566.2| Os06g0125600 [Oryza sativa Japonica Group]
Length = 377
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSI-EKRGPRPNAVTFVGVLTA 51
MP R+ + +AM+ G A+NG++ VE F+ + E+ G +PN +T VL A
Sbjct: 179 MPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQPNELTVSSVLPA 229
>gi|222617104|gb|EEE53236.1| hypothetical protein OsJ_36137 [Oryza sativa Japonica Group]
Length = 542
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 32/48 (66%)
Query: 4 PRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
P+D + + M++ A++G ++LF ++ G +P+AVTF+GVL+A
Sbjct: 328 PKDTVSYNVMIIAFAQHGHARDALDLFNAMVDSGLQPDAVTFLGVLSA 375
>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
Length = 893
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 32/46 (69%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
D + +AM++ A++GK ++++ + K G +P++VTFVGVL+A
Sbjct: 715 DLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSA 760
>gi|125595888|gb|EAZ35668.1| hypothetical protein OsJ_19954 [Oryza sativa Japonica Group]
Length = 510
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSI-EKRGPRPNAVTFVGVLTA 51
MP R+ + +AM+ G A+NG++ VE F+ + E+ G +PN +T VL A
Sbjct: 179 MPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQPNELTVSSVLPA 229
>gi|6983870|dbj|BAA90805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125553873|gb|EAY99478.1| hypothetical protein OsI_21446 [Oryza sativa Indica Group]
Length = 510
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSI-EKRGPRPNAVTFVGVLTA 51
MP R+ + +AM+ G A+NG++ VE F+ + E+ G +PN +T VL A
Sbjct: 179 MPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQPNELTVSSVLPA 229
>gi|255684962|gb|ACU27970.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255684964|gb|ACU27971.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255684966|gb|ACU27972.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255684968|gb|ACU27973.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255684972|gb|ACU27975.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255684974|gb|ACU27976.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255684978|gb|ACU27978.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255684980|gb|ACU27979.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255684986|gb|ACU27982.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255684990|gb|ACU27984.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255684992|gb|ACU27985.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255684996|gb|ACU27987.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255684998|gb|ACU27988.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255685000|gb|ACU27989.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255685004|gb|ACU27991.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255685008|gb|ACU27993.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255685010|gb|ACU27994.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255685014|gb|ACU27996.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255685016|gb|ACU27997.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255685022|gb|ACU28000.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255685026|gb|ACU28002.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255685028|gb|ACU28003.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255685030|gb|ACU28004.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255685032|gb|ACU28005.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255685034|gb|ACU28006.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255685048|gb|ACU28013.1| At1g59720-like protein [Arabidopsis thaliana]
Length = 137
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF--MSIEKRGPRPNAVTFVGVLTA 51
M RD + +AM+LG A +G+ + F M ++ RPN+VTFVG+L A
Sbjct: 32 MQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIA 83
>gi|255584555|ref|XP_002533004.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527215|gb|EEF29379.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P R+ + +A++ G A+NG+ V F + G RPN+VT +G+L A
Sbjct: 292 LPDRNTVSWNAVICGFAQNGRGEDAVIFFERMRAAGLRPNSVTLLGLLCA 341
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGV 60
MP R+ + +AM+ G ++ G N V LF+ + + G PN TF +T+ + G+
Sbjct: 191 MPERNVVSWNAMVGGFSQMGHNEEAVSLFIEMLREGFMPNQSTFPCAITSAANMASLGM 249
>gi|218186878|gb|EEC69305.1| hypothetical protein OsI_38371 [Oryza sativa Indica Group]
Length = 560
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 32/48 (66%)
Query: 4 PRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
P+D + + M++ A++G ++LF ++ G +P+AVTF+GVL+A
Sbjct: 344 PKDTVSYNVMIIAFAQHGHARDALDLFNAMVDSGLQPDAVTFLGVLSA 391
>gi|15228653|ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29230
gi|9293916|dbj|BAB01819.1| unnamed protein product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P +D + + M+ GL +G +ELF + + G RP+ VTF+ VL +
Sbjct: 376 IPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCS 425
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ + ++++ G AK+G +ELF + + G RPN VT++ VL+A
Sbjct: 538 MEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSA 587
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T + ++ GLA+NG+ ++ F ++ RPNA TFV V++A
Sbjct: 509 MSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSA 558
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP +D + M++ + +GK G + LF + G PN+VTF+GVL+
Sbjct: 373 MPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSG 422
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D + +AM+ GLA +G +ELF +++ G PN VT +GVL A
Sbjct: 379 KDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGFSPNKVTMIGVLCA 425
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P +D SAM+ GLA+ + +E+F+ + K G +PN TF V+ A
Sbjct: 465 IPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINA 514
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P +D SAM+ GLA+ + +E+F+ + K G +PN TF V+ A
Sbjct: 465 IPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINA 514
>gi|302757401|ref|XP_002962124.1| hypothetical protein SELMODRAFT_76039 [Selaginella moellendorffii]
gi|300170783|gb|EFJ37384.1| hypothetical protein SELMODRAFT_76039 [Selaginella moellendorffii]
Length = 488
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P RD +AM+ A NG +ELF + G PNAVTF +L A
Sbjct: 121 LPDRDVAPWTAMIASYAHNGHGAAALELFQRMALDGSPPNAVTFNTILCA 170
>gi|302818269|ref|XP_002990808.1| hypothetical protein SELMODRAFT_132472 [Selaginella moellendorffii]
gi|300141369|gb|EFJ08081.1| hypothetical protein SELMODRAFT_132472 [Selaginella moellendorffii]
Length = 484
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T S+++ A NG G+ELF +++ PN VTF+GVL A
Sbjct: 308 MVVRDVVTWSSLLATYASNGHGMEGLELFRLMQQDYTEPNEVTFLGVLFA 357
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD + ++M++ LA++G +ELF ++ G RP+ +T+VGV +A
Sbjct: 478 RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSA 524
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD + ++M++ LA++G +ELF ++ G RP+ +T+VGV +A
Sbjct: 478 RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSA 524
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGV 48
RD +AM++G ++G G + LF S+ G RPN+ T +
Sbjct: 376 RDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAM 419
>gi|383173444|gb|AFG70126.1| Pinus taeda anonymous locus 0_11486_01 genomic sequence
Length = 142
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP RD + +AM+ G A+N + LF ++ G +P+ VT V VL+A KI
Sbjct: 65 MPERDLVSWNAMIDGYAQNDYGDQALMLFRQMQMAGVKPDPVTIVNVLSACIKI 118
>gi|357495605|ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519426|gb|AET01050.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
P +++ T + MM+ ++G + L+ S+ + G RP+AVTFV +L+A
Sbjct: 590 PEKNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTFVAILSA 638
>gi|224115616|ref|XP_002332100.1| predicted protein [Populus trichocarpa]
gi|222874920|gb|EEF12051.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M + T +A++ LA NG+ +++F ++ G PN VTF+ VLTA + K+ +
Sbjct: 289 MMVKKVCTWNAIISSLANNGREEQALDMFKKMKGEGLCPNEVTFIAVLTACARAKLVEIG 348
Query: 62 L 62
L
Sbjct: 349 L 349
Score = 37.7 bits (86), Expect = 0.91, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP------RPNAVTFVGVLTAYGKI 55
MP RD + ++++ G AKNG G + LF + +PN T+V VL++ +
Sbjct: 179 MPKRDVVSWTSVINGFAKNGLFGEAIRLFREMMLHDDVKCCFVKPNEATYVSVLSSCANL 238
Query: 56 KIFGVTLMGIQ 66
GV +G Q
Sbjct: 239 DERGVLCIGKQ 249
>gi|224126355|ref|XP_002329533.1| predicted protein [Populus trichocarpa]
gi|222870242|gb|EEF07373.1| predicted protein [Populus trichocarpa]
Length = 693
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 32/47 (68%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD + + M++GLA + +++F ++ + G RPN+VTF+G+L+A
Sbjct: 486 RDLISWNTMIMGLAHHALANETLKVFETMLQSGTRPNSVTFLGILSA 532
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P RD T +AM+ G A++G+ + LF + ++G +P+ +TFV VL A
Sbjct: 258 VPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMA 307
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIF 58
P RD + ++M+ + G +ELF +E + +PN +T VGVL+A K F
Sbjct: 198 PRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDF 253
>gi|302785437|ref|XP_002974490.1| hypothetical protein SELMODRAFT_101245 [Selaginella moellendorffii]
gi|300158088|gb|EFJ24712.1| hypothetical protein SELMODRAFT_101245 [Selaginella moellendorffii]
Length = 381
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T S+++ A NG G+ELF +++ PN VTF+GVL A
Sbjct: 205 MIVRDVVTWSSLLATYASNGHGMEGLELFRLMQQDYTEPNEVTFLGVLFA 254
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R + SAM+ GLA +G+ + LF + + G PN VTF+G+L A
Sbjct: 288 MEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHA 337
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R + SAM+ GLA +G+ + LF + + G PN VTF+G+L A
Sbjct: 321 MEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHA 370
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R + SAM+ GLA +G+ + LF + + G PN VTF+G+L A
Sbjct: 321 MEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHA 370
>gi|357490167|ref|XP_003615371.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355516706|gb|AES98329.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 765
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
M R + M+ G A++G + + LF ++ G RPN VTFVGVL+A G
Sbjct: 452 MSIRTMILWTTMITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGVLSACG 503
>gi|449438679|ref|XP_004137115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Cucumis sativus]
Length = 688
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R + MM G A NG G+ELF +++ G +PN+ TF+ V++A
Sbjct: 404 MPDRSIDSWHLMMKGYADNGLGDEGLELFENMKNLGLQPNSQTFLYVMSA 453
>gi|115487662|ref|NP_001066318.1| Os12g0181900 [Oryza sativa Japonica Group]
gi|77553160|gb|ABA95956.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648825|dbj|BAF29337.1| Os12g0181900 [Oryza sativa Japonica Group]
gi|125578708|gb|EAZ19854.1| hypothetical protein OsJ_35439 [Oryza sativa Japonica Group]
Length = 584
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R+ T ++M+ G +G ++LF + + GP PN VTFV VL A
Sbjct: 274 RNVVTWTSMIAGYGMHGHGREAIKLFHLMRREGPTPNDVTFVAVLAA 320
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP D+ + +AM+ G +K+G + V LF+ ++ G +P TF VL A
Sbjct: 210 MPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCA 259
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP R+ + +AM+ A+NG+ ++ F + G +P++V+F+GVL+A +
Sbjct: 513 MPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSA--------CS 564
Query: 62 LMGIQPQNLWYY 73
G+ + LW++
Sbjct: 565 HSGLVEEGLWHF 576
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M+ P D + S+++LG A+ G ++LF ++ + +PN VTFVGVLTA
Sbjct: 530 MINP-DVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTA 579
>gi|296090396|emb|CBI40215.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP D T +A+++G A+NG +++F +E G P+ ++F+GVL A
Sbjct: 456 MPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCA 505
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP RD + +A++ + G + ++LF+ + RG +PN +T +L+A G +
Sbjct: 356 MPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNL 409
>gi|297741566|emb|CBI32698.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M+ P D + S+++LG A+ G ++LF ++ + +PN VTFVGVLTA
Sbjct: 268 MINP-DVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTA 317
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP D T +A+++G A+NG +++F +E G P+ ++F+GVL A
Sbjct: 747 MPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCA 796
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP RD + +A++ + G + ++LF+ + RG +PN +T +L+A G +
Sbjct: 647 MPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNL 700
>gi|8778758|gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
Length = 695
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF--MSIEKRGPRPNAVTFVGVLTA 51
M RD + +AM+LG A +G+ + F M ++ RPN+VTFVG+L A
Sbjct: 372 MQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIA 423
>gi|15218900|ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g59720, mitochondrial; Flags: Precursor
gi|332195486|gb|AEE33607.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF--MSIEKRGPRPNAVTFVGVLTA 51
M RD + +AM+LG A +G+ + F M ++ RPN+VTFVG+L A
Sbjct: 315 MQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIA 366
>gi|110737061|dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF--MSIEKRGPRPNAVTFVGVLTA 51
M RD + +AM+LG A +G+ + F M ++ RPN+VTFVG+L A
Sbjct: 306 MQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIA 357
>gi|5080805|gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF--MSIEKRGPRPNAVTFVGVLTA 51
M RD + +AM+LG A +G+ + F M ++ RPN+VTFVG+L A
Sbjct: 292 MQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIA 343
>gi|413948598|gb|AFW81247.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 788
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
D + +AM++G A++G + ELF + + G +P+ VTF+GVLTA
Sbjct: 428 DVISWTAMIVGHAEHGHSKEAFELFEEMCRIGLKPDHVTFIGVLTA 473
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD T ++M+L LA++G +ELF + + +P+ +T+VGVL+A
Sbjct: 477 RDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSA 523
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLT 50
RD +AM++G A+NG + LF + + GP+PN T VL+
Sbjct: 375 RDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLS 420
>gi|357482291|ref|XP_003611431.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512766|gb|AES94389.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 735
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + ++M++GL+ +G+ + ++ ++ + G P+AVTF+GVLTA
Sbjct: 526 MNCRDKISWNSMIMGLSDHGRANEALNMYETMLEFGVYPDAVTFLGVLTA 575
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 9/72 (12%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI-------KI 57
RD +T ++++ GL+ +G +E+F + G +PN +TF+GVL+A + K+
Sbjct: 338 RDVSTWNSIITGLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGLLDQARKL 397
Query: 58 FGV--TLMGIQP 67
F + ++ GI+P
Sbjct: 398 FEMMNSVYGIEP 409
>gi|242052719|ref|XP_002455505.1| hypothetical protein SORBIDRAFT_03g012320 [Sorghum bicolor]
gi|241927480|gb|EES00625.1| hypothetical protein SORBIDRAFT_03g012320 [Sorghum bicolor]
Length = 526
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD +AM+ G A +G++ ++LF S+ G PN T VLTA
Sbjct: 29 MPDRDVVAWTAMLSGYASSGRHREALDLFRSMAAAGVIPNEFTLSSVLTA 78
>gi|357486633|ref|XP_003613604.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514939|gb|AES96562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP T +A++ GL++NG G V LF I RPN+VT V +L+A
Sbjct: 97 MPQPTITAFNAVLSGLSRNGPRGQAVWLFRQIGFWNIRPNSVTIVSLLSA 146
>gi|302791828|ref|XP_002977680.1| hypothetical protein SELMODRAFT_51483 [Selaginella moellendorffii]
gi|300154383|gb|EFJ21018.1| hypothetical protein SELMODRAFT_51483 [Selaginella moellendorffii]
Length = 571
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+A + +AMM + + G++ + LF +E G P+++ F+ V+ A
Sbjct: 192 MPVRNAVSWTAMMAAMVRAGRHDDALRLFRDMEDDGVEPDSIAFITVINA 241
>gi|302795666|ref|XP_002979596.1| hypothetical protein SELMODRAFT_51482 [Selaginella moellendorffii]
gi|300152844|gb|EFJ19485.1| hypothetical protein SELMODRAFT_51482 [Selaginella moellendorffii]
Length = 571
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+A + +AMM + + G++ + LF +E G P+++ F+ V+ A
Sbjct: 192 MPVRNAVSWTAMMAAMVRAGRHDDALRLFRDMEDDGVEPDSIAFITVINA 241
>gi|296089801|emb|CBI39620.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + +AMM+G +G VELF + + G RP+ V F+ +L+A
Sbjct: 356 MSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSA 405
>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + +AMM+G +G VELF + + G RP+ V F+ +L+A
Sbjct: 372 MSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSA 421
>gi|115470801|ref|NP_001058999.1| Os07g0172600 [Oryza sativa Japonica Group]
gi|34394447|dbj|BAC83621.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113610535|dbj|BAF20913.1| Os07g0172600 [Oryza sativa Japonica Group]
Length = 872
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGK-NGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RDA + SA++ G A+ G GVEL + G P TFVG+LTA
Sbjct: 105 MPARDAASYSALISGHARLGSPAAAGVELLGRMRLAGMAPTEYTFVGLLTA 155
>gi|125599274|gb|EAZ38850.1| hypothetical protein OsJ_23267 [Oryza sativa Japonica Group]
Length = 872
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGK-NGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RDA + SA++ G A+ G GVEL + G P TFVG+LTA
Sbjct: 105 MPARDAASYSALISGHARLGSPAAAGVELLGRMRLAGMAPTEYTFVGLLTA 155
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
P +D SAM+ GLA +G V LF + +G RPNAVTF+ V A
Sbjct: 262 PNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCA 310
>gi|302142415|emb|CBI19618.3| unnamed protein product [Vitis vinifera]
Length = 576
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R + + M+LGL KNG+ + +F ++K G P+ TF+GVL+A
Sbjct: 308 MRGRTLDSWNRMILGLVKNGEGEEALAIFSKLKKDGIEPDGSTFIGVLSA 357
>gi|224136482|ref|XP_002326871.1| predicted protein [Populus trichocarpa]
gi|222835186|gb|EEE73621.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P ++ T +A++ G A NG +E F +++ G +PN +T GVL+A
Sbjct: 358 IPKKETATWNALINGFAMNGLASEALEAFSEMQQEGIKPNDITMTGVLSA 407
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
D + S++++G A+ G ELF ++ G +PN +TFVG+LTA I
Sbjct: 569 DIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHI 618
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
D + S++++G A+ G ELF ++ G +PN +TFVG+LTA I
Sbjct: 569 DIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHI 618
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKI--FG 59
MP RD + S M++G + NG F + + RPN V+ GVL+A + FG
Sbjct: 396 MPHRDDVSWSTMIVGFSHNGSFNESFSYFRELLRAEMRPNEVSLTGVLSACSQSGAFEFG 455
Query: 60 VTLMGIQPQNLWYYI 74
TL G ++ + +I
Sbjct: 456 KTLHGFVEKSGYSWI 470
>gi|242047514|ref|XP_002461503.1| hypothetical protein SORBIDRAFT_02g003670 [Sorghum bicolor]
gi|241924880|gb|EER98024.1| hypothetical protein SORBIDRAFT_02g003670 [Sorghum bicolor]
Length = 786
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP RD ++M+ GLA +G V+LF G P +TFVGVL A +
Sbjct: 324 MPWRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTNITFVGVLNACSR------- 376
Query: 62 LMGIQPQNLWYY 73
G+ + WY+
Sbjct: 377 -TGLVDEGRWYF 387
>gi|224134663|ref|XP_002327460.1| predicted protein [Populus trichocarpa]
gi|222836014|gb|EEE74435.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M RD + ++ GLA + K+ ++LF ++ G PN VTFV VL A ++ +
Sbjct: 305 MDDRDVYAFTCLISGLANHDKSEAAIDLFNRMQDEGVVPNEVTFVCVLNACSRMGMVDEG 364
Query: 62 LMGIQPQNLWYYIDGQIDAW 81
L + + Y I+ QI +
Sbjct: 365 LRIFESMSNRYVIEPQIQHY 384
>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
Length = 795
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP +D + + +++G A +G+ + +E+F ++ G PN TFV VLTA
Sbjct: 485 MPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTA 534
>gi|356553601|ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Glycine max]
Length = 534
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFG 59
P R + +++++GLA NG +E F +E +P+ V+F+GVLTA I G
Sbjct: 318 PTRGLSCWNSIIIGLALNGYERKAIEYFSKLEASDLKPDHVSFIGVLTACKYIGAVG 374
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D +AM+LGLA +G + +F + + G +PN VTF+GVL+A
Sbjct: 393 KDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSA 439
>gi|255684982|gb|ACU27980.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255684984|gb|ACU27981.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255685024|gb|ACU28001.1| At1g59720-like protein [Arabidopsis thaliana]
Length = 137
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF--MSIEKRGPRPNAVTFVGVLTA 51
M RD + +AM+LG A +G+ + F M ++ RPN+VTFVG+L A
Sbjct: 32 MQKRDLASWNAMILGFATHGRAEEAMNCFDCMVDKRESVRPNSVTFVGLLIA 83
>gi|225451435|ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 474
Score = 40.4 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R+ T +AM+ GLA +G ++ F +EK PN +TFVGVL+A
Sbjct: 291 RNTATWNAMICGLAVHGHAKEALDRFWKLEKEQIVPNDITFVGVLSA 337
>gi|147769957|emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]
Length = 476
Score = 40.4 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R+ T +AM+ GLA +G ++ F +EK PN +TFVGVL+A
Sbjct: 293 RNTATWNAMICGLAVHGHAKEALDRFWKLEKEQIVPNDITFVGVLSA 339
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 40.4 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSI-EKRGPRPNAVTFVGVL 49
MP RD +A++ G A+NG M +E+ + + E+ G RP+++T V VL
Sbjct: 120 MPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVL 168
>gi|125553774|gb|EAY99379.1| hypothetical protein OsI_21347 [Oryza sativa Indica Group]
Length = 484
Score = 40.4 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSI-EKRGPRPNAVTFVGVL 49
MP RD +A++ G A+NG M +E+ + + E+ G RP+++T V VL
Sbjct: 120 MPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVL 168
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 40.4 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSI-EKRGPRPNAVTFVGVL 49
MP RD +A++ G A+NG M +E+ + + E+ G RP+++T V VL
Sbjct: 120 MPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVL 168
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D T +A++ G +K G N + LF ++ G RP+ TF VLTA
Sbjct: 200 MAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTA 249
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R++ + +A++ A+NG G + F + G +PN+V+F+ +L A
Sbjct: 503 MPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCA 552
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ + ++++ G AK+G +ELF + + G RPN VT++ VL+A
Sbjct: 538 MEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSA 587
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 33/55 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIK 56
MP RD + + ++ G A+NG V++ + +++ G +P+++T V VL A +K
Sbjct: 203 MPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLK 257
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKI 57
+ T +AM+LG A+NG + LF ++ +P++ T V V+TA + +
Sbjct: 408 KTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSV 460
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+M R T +AM+ G NG ++LF ++ +PN +TF+ V+ A
Sbjct: 505 LMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAA 555
>gi|413934702|gb|AFW69253.1| hypothetical protein ZEAMMB73_589560 [Zea mays]
Length = 664
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP-RPNAVTFVGVLTA 51
M ++ T S+M++GLA +G+ + LF + +R PN VTF+GVLTA
Sbjct: 351 MHDKNVYTYSSMIVGLASHGRANDVIALFNDMVRRADVEPNHVTFIGVLTA 401
>gi|356518836|ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 568
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ T +A++ GLA +G+ +E F + + G +P+ + F+GVL A
Sbjct: 257 MPHRNVVTWTALINGLAVHGRGREALEAFYDMVESGLKPDRIAFMGVLVA 306
>gi|225453406|ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
[Vitis vinifera]
gi|297734603|emb|CBI16654.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP ++ + +A++ A NG+ + LFM + +G PN +T +GVL+A
Sbjct: 344 MPEKETASWNALINAFAINGRAKEALGLFMEMNHKGFMPNEITMIGVLSA 393
>gi|357150569|ref|XP_003575504.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 548
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M P+D + + M+ LA +G ++LF + + G +P+AVTF+GVL+A
Sbjct: 332 MDPKDVVSYNVMVSALAHHGHGKDALKLFEQMIEGGLQPDAVTFLGVLSA 381
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIK 56
D T S+++ GL++ GK ++ F E+ G RPNAVTF ++ K +
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTR 533
>gi|361066941|gb|AEW07782.1| Pinus taeda anonymous locus 0_11486_01 genomic sequence
Length = 142
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP RD + +AM+ G A+N + LF ++ G +P+ VT V VL+A KI
Sbjct: 65 MPERDLVSWNAMIDGYAQNDYGDQALMLFRQMQIAGVKPDPVTIVNVLSACIKI 118
>gi|326507410|dbj|BAK03098.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 698
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 12/73 (16%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA---------- 51
MP R+ + +A++ G ++GK V+LF+ +E+ G P+ TF +LT
Sbjct: 162 MPERNTVSWNALVAGYVESGKVAPAVQLFVEMEREGFLPDEATFAALLTVVNDSTCFLMH 221
Query: 52 --YGKIKIFGVTL 62
+GKI +G L
Sbjct: 222 QLHGKIVKYGSAL 234
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P RD + +A++ G A+ G + +ELF +++ G + N VT+ VLTA
Sbjct: 220 LPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTA 269
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+MP R+ + +AM+ ++ G + LF+ + + G PN TF VLT+
Sbjct: 118 VMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTS 168
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD SAM+ GLA +G ++LF +++ +PNAVTF +L A
Sbjct: 429 RDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCA 475
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGK 54
+D + ++M+ G + G ++LF ++ RPN VT VGVL+A K
Sbjct: 195 KDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAK 244
>gi|357141490|ref|XP_003572243.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Brachypodium distachyon]
Length = 884
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
P + T SAM++GLA NG + F + + G P+ TF GVL+A
Sbjct: 573 PQKSVVTWSAMIMGLAANGFGEDAISAFEEMSRSGVVPDGQTFTGVLSA 621
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 9 TSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGK 54
T S++M GL K+G++ +ELF + RG RPN VT+ ++T K
Sbjct: 264 TYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCK 309
>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M ++ + + M+ G +G G ELF ++ G +P++VTFVG+LTA
Sbjct: 365 MEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTA 414
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 9 TSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGK 54
T S++M GL K+G++ +ELF + RG RPN VT+ ++T K
Sbjct: 264 TYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCK 309
>gi|414871822|tpg|DAA50379.1| TPA: hypothetical protein ZEAMMB73_401482 [Zea mays]
Length = 522
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 8 TTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
++ ++MM GLA +G+ V LF ++ G P+ VTF+ VLTAYG
Sbjct: 335 SSWNSMMQGLAVHGQWREAVALFSELKSYGLSPDNVTFIAVLTAYG 380
>gi|359492768|ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Vitis vinifera]
Length = 665
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD + + M++GLA NG+ +E+F + GP P+ +T GVL A
Sbjct: 433 RDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLA 479
>gi|357131180|ref|XP_003567218.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
mitochondrial-like [Brachypodium distachyon]
Length = 474
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M+ R+ + ++++ G A +G + VELF + + G RPN VTF+ VL A
Sbjct: 287 MLNRRNLVSWTSIISGFAMHGLSTEAVELFAEMRRSGIRPNRVTFLSVLNA 337
>gi|224111954|ref|XP_002332852.1| predicted protein [Populus trichocarpa]
gi|222837177|gb|EEE75556.1| predicted protein [Populus trichocarpa]
Length = 331
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRG---PRPNAVTFVGVLTA 51
MP R A + ++++ AK G +E+F S+++ G RP+ +TF+GVL A
Sbjct: 106 MPERSAVSWTSLITAFAKQGYAQAVLEIFRSMQRLGTSEARPDGITFIGVLCA 158
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP R+ + + M+ G AKNGK + LF + K G + V + LTA ++
Sbjct: 1 MPERNVVSWTTMISGYAKNGKCKQALNLFDQMRKAGVELDQVVLLAALTACAEL 54
>gi|147833409|emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD + + M++GLA NG+ +E+F + GP P+ +T GVL A
Sbjct: 1106 RDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLA 1152
>gi|242092732|ref|XP_002436856.1| hypothetical protein SORBIDRAFT_10g010013 [Sorghum bicolor]
gi|241915079|gb|EER88223.1| hypothetical protein SORBIDRAFT_10g010013 [Sorghum bicolor]
Length = 626
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 28/55 (50%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIK 56
M RDA T +AM+ G LF S+ +RG RP A TF V +A G ++
Sbjct: 94 MSHRDAVTYNAMLSGYVAGALPDEAFRLFYSMRERGVRPTAFTFSIVSSAVGSVR 148
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
M+ +D + M+LGL +NG+ + +F I K G +P+ +T G L+A G
Sbjct: 394 MVGAKDLVLWNTMLLGLLQNGRAKEALVIFKRILKCGIQPDRITLFGALSACG 446
>gi|147834049|emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
Length = 751
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP ++ + +A++ A NG+ + LFM + +G PN +T +GVL+A
Sbjct: 518 MPEKETASWNALINAFAINGRAKEALGLFMEMNHKGFMPNEITMIGVLSA 567
>gi|302142723|emb|CBI19926.3| unnamed protein product [Vitis vinifera]
Length = 486
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD + + M++GLA NG+ +E+F + GP P+ +T GVL A
Sbjct: 180 RDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLA 226
>gi|255562850|ref|XP_002522430.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538315|gb|EEF39922.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 556
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
D + +AM+ G A++G ++LF I + G +P+ VTF+GVLTA
Sbjct: 483 DIVSWTAMINGYAEHGCRQEAIDLFEKIPRIGLKPDPVTFIGVLTA 528
>gi|297604972|ref|NP_001056430.2| Os05g0581300 [Oryza sativa Japonica Group]
gi|255676606|dbj|BAF18344.2| Os05g0581300 [Oryza sativa Japonica Group]
Length = 704
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
D + +AM++G A++G + +ELF + G +P+ VTF+GVL A
Sbjct: 448 DVVSWTAMIVGYAEHGHSKKALELFQEMCHVGLKPDHVTFIGVLNA 493
>gi|48475127|gb|AAT44196.1| hypothetical protein, contains pentatricopeptide (PPR) repeat
[Oryza sativa Japonica Group]
gi|51854327|gb|AAU10708.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 634
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
D + +AM++G A++G + +ELF + G +P+ VTF+GVL A
Sbjct: 397 DVVSWTAMIVGYAEHGHSKKALELFQEMCHVGLKPDHVTFIGVLNA 442
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+MP R+ + ++M+ G A++G ++LF + G P+ VTFVGVL+A
Sbjct: 752 LMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSA 802
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+MP R+ + ++M+ G A++G ++LF + G P+ VTFVGVL+A
Sbjct: 600 LMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSA 650
>gi|255563078|ref|XP_002522543.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538234|gb|EEF39843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 530
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
MP ++ + S+M+ G KNG+ ++LF ++ PN VTF+G L+A G
Sbjct: 341 MPEKNVFSWSSMIDGYGKNGRPDEALQLFHKMQDCCIEPNYVTFLGALSACG 392
>gi|224140139|ref|XP_002323442.1| predicted protein [Populus trichocarpa]
gi|222868072|gb|EEF05203.1| predicted protein [Populus trichocarpa]
Length = 526
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 34/50 (68%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D + ++M+ G A++G G+ LF ++ +G +P+A+TF+GVL++
Sbjct: 290 MVGKDIVSWNSMIAGYAQHGLAVQGIGLFERMKSQGVKPDAITFLGVLSS 339
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 11/77 (14%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRG--PRPNAVTFVGVLTAYGK----- 54
MP ++ T ++++ G A G+ M + LF + RG P PN +TFV +L+A +
Sbjct: 371 MPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVE 430
Query: 55 --IKIFGV--TLMGIQP 67
+KIF + GI+P
Sbjct: 431 NGMKIFDSMRSTYGIEP 447
>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 754
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R ++M+ G +++G + + +F + G RPN VTFVGVL+A
Sbjct: 439 MSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSA 488
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M + + +AM+ G A +G+ +E FM ++ G PN +TF G+LTA
Sbjct: 263 MEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTA 312
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M + + +AM+ G A +G+ +E FM ++ G PN +TF G+LTA
Sbjct: 311 MEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTA 360
>gi|224064340|ref|XP_002301427.1| predicted protein [Populus trichocarpa]
gi|222843153|gb|EEE80700.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEK-RGPRPNAVTFVGVLTAYGKI 55
+MP R + + M+ G ++NG +E+F+ +EK + RPN VT V +A K+
Sbjct: 101 LMPSRSVVSWTTMISGYSQNGMYTKALEMFLKMEKDKEVRPNEVTIASVFSACAKL 156
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 31/47 (65%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R+ + ++MM+GLA +G++ ++L+ + G P+ VTFVG++ A
Sbjct: 208 RNLCSWNSMMMGLAVHGRSNEALQLYDQMLGEGIEPDDVTFVGLILA 254
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M + + +AM+ G A +G+ +E FM ++ G PN +TF G+LTA
Sbjct: 311 MEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTA 360
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 11/77 (14%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRG--PRPNAVTFVGVLTAYGK----- 54
MP ++ T ++++ G A G+ M + LF + RG P PN +TFV +L+A +
Sbjct: 321 MPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVE 380
Query: 55 --IKIFGV--TLMGIQP 67
+KIF + GI+P
Sbjct: 381 NGMKIFDSMRSTYGIEP 397
>gi|383173440|gb|AFG70124.1| Pinus taeda anonymous locus 0_11486_01 genomic sequence
gi|383173442|gb|AFG70125.1| Pinus taeda anonymous locus 0_11486_01 genomic sequence
gi|383173446|gb|AFG70127.1| Pinus taeda anonymous locus 0_11486_01 genomic sequence
Length = 142
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP RD + +AM+ G A+N + LF ++ G +P+ VT V VL+A K+
Sbjct: 65 MPERDLVSWNAMIDGYAQNDCGDQALMLFHQMQMAGVKPDPVTIVNVLSACIKV 118
>gi|356534299|ref|XP_003535694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 634
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D +AM++GLA GK + LF I + G +PNA TF+G L+A
Sbjct: 412 KDVVLFNAMIMGLAVYGKGEDALRLFYKIPEFGLQPNAGTFLGALSA 458
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
+P R+ + +AM+ G NG+ + F + + G RPN VTFV VL+A G
Sbjct: 621 LPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHS---GFI 677
Query: 62 LMGIQ 66
MG+Q
Sbjct: 678 EMGLQ 682
>gi|222631052|gb|EEE63184.1| hypothetical protein OsJ_17993 [Oryza sativa Japonica Group]
Length = 746
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D +AM+ G A+NG + + LF S+ G RP+ +T GVL+A
Sbjct: 318 KDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSA 364
Score = 37.7 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIE-KRGPRPNAVTFVGVLTA 51
MP ++ + +A++ GLA NG+ ++ F + + G +P+ +TF+GVL+A
Sbjct: 416 MPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSA 466
>gi|449528479|ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P +D TT + M+ G A +G +ELF S+ + +PN VTFV VL A
Sbjct: 357 IPEKDVTTWTTMITGFAFHGFGNKALELF-SVMQAETKPNDVTFVSVLAA 405
>gi|449443225|ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P +D TT + M+ G A +G +ELF S+ + +PN VTFV VL A
Sbjct: 422 IPEKDVTTWTTMITGFAFHGFGNKALELF-SVMQAETKPNDVTFVSVLAA 470
>gi|218196522|gb|EEC78949.1| hypothetical protein OsI_19398 [Oryza sativa Indica Group]
Length = 746
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D +AM+ G A+NG + + LF S+ G RP+ +T GVL+A
Sbjct: 318 KDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSA 364
Score = 37.7 bits (86), Expect = 1.00, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIE-KRGPRPNAVTFVGVLTA 51
MP ++ + +A++ GLA NG+ ++ F + + G +P+ +TF+GVL+A
Sbjct: 416 MPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSA 466
>gi|147784524|emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]
Length = 763
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
D + S+++LG A+ G ++LF ++ + +PN VTFVGVLTA
Sbjct: 534 DVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTA 579
>gi|224577081|gb|ACN57214.1| At1g59720-like protein [Capsella grandiflora]
Length = 180
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP--RPNAVTFVGVLTA 51
MP RD + +AM+LG A +G+ ++ F + K+ +PN+VTFV +L A
Sbjct: 75 MPKRDLASWNAMILGFATHGRAKEAMDCFDRMVKKXENIKPNSVTFVALLIA 126
>gi|115463111|ref|NP_001055155.1| Os05g0307200 [Oryza sativa Japonica Group]
gi|113578706|dbj|BAF17069.1| Os05g0307200 [Oryza sativa Japonica Group]
Length = 767
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D +AM+ G A+NG + + LF S+ G RP+ +T GVL+A
Sbjct: 318 KDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSA 364
Score = 37.7 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIE-KRGPRPNAVTFVGVLTA 51
MP ++ + +A++ GLA NG+ ++ F + + G +P+ +TF+GVL+A
Sbjct: 416 MPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSA 466
>gi|2827553|emb|CAA16561.1| predicted protein [Arabidopsis thaliana]
gi|7269122|emb|CAB79231.1| predicted protein [Arabidopsis thaliana]
Length = 889
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMS-IEKRGPRPNAVTFVGVLTAY 52
+D + SAM++G NG LF + IEK+ P PN VTF G+L+AY
Sbjct: 664 KDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIP-PNVVTFTGLLSAY 711
>gi|359473776|ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Vitis vinifera]
Length = 835
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
DA +A++ G A +G + F ++ G RPNAVTF+ VLTA
Sbjct: 455 DAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTA 500
>gi|302785117|ref|XP_002974330.1| hypothetical protein SELMODRAFT_50864 [Selaginella moellendorffii]
gi|300157928|gb|EFJ24552.1| hypothetical protein SELMODRAFT_50864 [Selaginella moellendorffii]
Length = 720
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+MP ++A T ++M+ G + NG VE+F +E+ G R + + +V V+ A
Sbjct: 363 VMPSKNAVTWTSMIRGYSTNGFAREAVEVFQKMEQEGCRADKIVYVAVMEA 413
>gi|255684970|gb|ACU27974.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255684976|gb|ACU27977.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255684988|gb|ACU27983.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255684994|gb|ACU27986.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255685002|gb|ACU27990.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255685006|gb|ACU27992.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255685012|gb|ACU27995.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255685018|gb|ACU27998.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255685036|gb|ACU28007.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255685038|gb|ACU28008.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255685044|gb|ACU28011.1| At1g59720-like protein [Arabidopsis thaliana]
gi|255685046|gb|ACU28012.1| At1g59720-like protein [Arabidopsis thaliana]
Length = 137
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF--MSIEKRGPRPNAVTFVGVLTA 51
M RD + +AM+LG A +G+ + F M ++ RPN+VTFVG+L A
Sbjct: 32 MQKRDLASWNAMILGFATHGRAEEAMNCFDCMVDKRESVRPNSVTFVGLLIA 83
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
DA +A++ G A +G + F ++ G RPNAVTF+ VLTA
Sbjct: 455 DAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTA 500
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R + ++M+ A++G++ ++LF + G RPN +TFVGVL A
Sbjct: 355 MSTRTLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAA 404
>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
Length = 734
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
DA +A++ G A +G + F ++ G RPNAVTF+ VLTA
Sbjct: 455 DAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTA 500
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD ++++ G ++NG+ + LF ++ G P+ VTF+ VL A
Sbjct: 483 MPHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLEGTAPDPVTFINVLCA 532
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVTLMG 64
R++ T SAM+ G ++NG V +F + G P T VGVL A + G + G
Sbjct: 284 RNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDV---GTLMEG 340
Query: 65 IQPQNL 70
Q L
Sbjct: 341 KQAHGL 346
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD + +AM+ G A +G +ELF +E G PN +TF+G L A
Sbjct: 493 RDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHA 539
>gi|222632692|gb|EEE64824.1| hypothetical protein OsJ_19680 [Oryza sativa Japonica Group]
Length = 688
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
D + +AM++G A++G + +ELF + G +P+ VTF+GVL A
Sbjct: 451 DVVSWTAMIVGYAEHGHSKKALELFQEMCHVGLKPDHVTFIGVLNA 496
>gi|356570151|ref|XP_003553254.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 465
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRG-PRPNAVTFVGVLTA 51
MP R+ T +AM+ GL G + LF ++K G PN VTFVGVL+A
Sbjct: 280 MPERNVVTWNAMICGLGAYGYVDDALGLFEKMKKEGVVVPNGVTFVGVLSA 330
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP + T +AM+ G A+NG G ++L+ +E G P+ VT VGVL++
Sbjct: 220 MPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSS 269
>gi|297740128|emb|CBI30310.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP + T +AM+ G A+NG G ++L+ +E G P+ VT VGVL++
Sbjct: 220 MPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSS 269
>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
Length = 841
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
+P R+ + +AM+ G NG+ + F + + G RPN VTFV VL+A G
Sbjct: 608 LPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHS---GFI 664
Query: 62 LMGIQ 66
MG+Q
Sbjct: 665 EMGLQ 669
>gi|147861799|emb|CAN81086.1| hypothetical protein VITISV_027167 [Vitis vinifera]
Length = 1756
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + + M+ L+++G + +F+ + K+G RPN++T+ VL+A
Sbjct: 1609 MPERDTVSWNTMISILSQHGFGAETLNMFLEMWKQGFRPNSMTYASVLSA 1658
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLT--AYGKIKIFG 59
+P +D+ + M+ G KNG +G +++F+ + +PN+VTF VL+ A + G
Sbjct: 119 IPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLG 178
Query: 60 VTLMGI 65
L GI
Sbjct: 179 TQLHGI 184
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLT--AYGKIKIFG 59
+P +D+ + M+ G KNG +G +++F+ + +PN+VTF VL+ A + G
Sbjct: 119 IPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLG 178
Query: 60 VTLMGI 65
L GI
Sbjct: 179 TQLHGI 184
>gi|334186821|ref|NP_194007.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635615|sp|P0C8Q5.1|PP336_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g22760
gi|332659255|gb|AEE84655.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 578
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMS-IEKRGPRPNAVTFVGVLTAY 52
+D + SAM++G NG LF + IEK+ P PN VTF G+L+AY
Sbjct: 395 KDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIP-PNVVTFTGLLSAY 442
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ + +AM+ G A +G V+LF S++K +P+ VTF VL A
Sbjct: 350 MPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGA 399
>gi|356498922|ref|XP_003518295.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Glycine max]
Length = 682
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMS-IEKRGPRPNAVTFVGVLTAYGKIKIFGV 60
MP R+ + ++M+ G A+NG++ ++LF I + +P+ VT V V +A G + G+
Sbjct: 357 MPERNTVSWNSMIAGYAQNGESLKAIQLFKEMISSKDSKPDEVTMVSVFSACGHLGRLGL 416
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D + + ++ GLA +G ++L +++ G P+ +T++GVLTA
Sbjct: 459 MATKDLVSYNTLISGLAAHGHGTESIKLMSKMKEDGIGPDRITYIGVLTA 508
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M + + S+M++G A +G+ ++LF + + G +PN VTFVG+ TA
Sbjct: 304 MKEMNVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTA 353
>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP A T SAM+ G + G + VELF ++ G + + VT +GVL A
Sbjct: 190 MPKESAVTWSAMIGGYVRGGLSSDAVELFREMQANGVQADEVTVIGVLAA 239
>gi|21671949|gb|AAM74311.1|AC114474_3 Putative PPR repeat domain containing protein [Oryza sativa
Japonica Group]
gi|31431707|gb|AAP53440.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574618|gb|EAZ15902.1| hypothetical protein OsJ_31320 [Oryza sativa Japonica Group]
Length = 157
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 12 AMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+M+LGLA +G+ + LF S+++ G PN VT +GVLTA
Sbjct: 69 SMILGLAMHGRGEDALSLFASMQRAGVTPNEVTLLGVLTA 108
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ T + M+ GLA+NG G++LF ++ G P F G +TA
Sbjct: 383 MPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITA 432
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP D+ + +AM+ LA++G +ELF + K P+ +TF+ +LTA
Sbjct: 484 MPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTA 533
>gi|414886078|tpg|DAA62092.1| TPA: hypothetical protein ZEAMMB73_488923 [Zea mays]
Length = 714
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + S M+ G + G++ M ++LF S+ PN VT L+A
Sbjct: 369 MPERDTVSWSTMISGYVQTGRSDMALKLFYSMLNTSIEPNEVTLASALSA 418
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 29/41 (70%)
Query: 11 SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+AM+ LA +G M ++LF +++ +PN++TF+GVL+A
Sbjct: 481 NAMICSLAIHGYAHMSLDLFSQLQRTSIKPNSITFIGVLSA 521
>gi|242037017|ref|XP_002465903.1| hypothetical protein SORBIDRAFT_01g047870 [Sorghum bicolor]
gi|241919757|gb|EER92901.1| hypothetical protein SORBIDRAFT_01g047870 [Sorghum bicolor]
Length = 656
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP +D + + +++G A +G+ + +E+F ++ G PN TFV VLTA
Sbjct: 485 MPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTA 534
>gi|255571614|ref|XP_002526753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533942|gb|EEF35667.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 818
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P RD + +A++ G A+ G + +ELF +E+ G N VT+ VLT+
Sbjct: 637 LPERDVVSCTAIISGYAQLGLDEEALELFRRLEREGLSSNCVTYASVLTS 686
>gi|115479117|ref|NP_001063152.1| Os09g0411600 [Oryza sativa Japonica Group]
gi|50252330|dbj|BAD28363.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113631385|dbj|BAF25066.1| Os09g0411600 [Oryza sativa Japonica Group]
Length = 548
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD+ + M+ G GK VELF + K + +AVT V +LTA
Sbjct: 252 MPGRDSVAWTTMIAGCVNAGKAAEAVELFWRMRKANAKVDAVTMVALLTA 301
>gi|115446651|ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|46389885|dbj|BAD15486.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536636|dbj|BAF09019.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|125582482|gb|EAZ23413.1| hypothetical protein OsJ_07107 [Oryza sativa Japonica Group]
gi|215712305|dbj|BAG94432.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 586
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA--------YGKIK 56
RD +AM+ GLA NG +ELF + ++G PN TF+ VL A GK
Sbjct: 278 RDVVLWNAMIGGLAMNGYGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRV 337
Query: 57 IFGVTLMGIQPQNLWY 72
+ GI+PQ Y
Sbjct: 338 FKSMQDYGIKPQREHY 353
>gi|356534169|ref|XP_003535630.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Glycine max]
Length = 595
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP ++ T +A + GLA NG ++ F + + G RPN VTF+ V TA
Sbjct: 369 MPSKNIRTWNAYIGGLAINGYGKEALKQFEDLVESGTRPNEVTFLAVFTA 418
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D T +A+++G A+NGK ++ + ++ G RP+ +TF+G+L A
Sbjct: 526 MQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFA 575
>gi|255540005|ref|XP_002511067.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550182|gb|EEF51669.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 318
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEK-RGPRPNAVTFVGVLTA 51
M +D + +AM+ G A NG + +ELF +E +PN VTF+GVL+A
Sbjct: 207 MVKKDLFSWTAMISGFAMNGYSDEALELFAQVETCNDVKPNEVTFLGVLSA 257
>gi|224121748|ref|XP_002330643.1| predicted protein [Populus trichocarpa]
gi|222872247|gb|EEF09378.1| predicted protein [Populus trichocarpa]
Length = 777
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
+MP R+ + ++M+ G A++G + LF ++ G P+ +TFVGVL+A I
Sbjct: 621 LMPMRNLYSWNSMISGYARHGYGDNALRLFTRMKLSGQLPDHITFVGVLSACSHI 675
>gi|449451309|ref|XP_004143404.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
gi|449526377|ref|XP_004170190.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 577
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP ++ T +A++ L KN + ++LF + + PNA TFVGVL+A
Sbjct: 237 MPVKNVHTWTALINALVKNKYSNEALDLFQQMLEEKTSPNAFTFVGVLSA 286
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D + ++++ G A+NG + F + + G RPN VTF+ VL+A
Sbjct: 344 KDVVSWNSLITGFAQNGLGREALLAFRKMTEVGIRPNKVTFLAVLSA 390
>gi|297815228|ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321335|gb|EFH51756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 629
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP +D + + M+ GL +G +ELF + K G P+ VTF+ VL +
Sbjct: 376 MPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRKEGIWPDKVTFIAVLCS 425
>gi|302143669|emb|CBI22530.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ + ++M+ G AK+G +E+F + + G +PN +T+V VL+A
Sbjct: 268 MEDRNVISWTSMITGFAKHGFATRALEMFHQMLETGTKPNEITYVAVLSA 317
>gi|226531155|ref|NP_001148193.1| methyltransferase small domain [Zea mays]
gi|195616632|gb|ACG30146.1| methyltransferase small domain [Zea mays]
Length = 656
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + S M+ G + G++ M ++LF S+ PN VT L+A
Sbjct: 369 MPERDTVSWSTMISGYVQTGRSDMALKLFYSMLNTSIEPNEVTLASALSA 418
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 29/41 (70%)
Query: 11 SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+AM+ LA +G M ++LF +++ +PN++TF+GVL+A
Sbjct: 481 NAMICSLAIHGYAHMSLDLFSQLQRTSIKPNSITFIGVLSA 521
>gi|125605669|gb|EAZ44705.1| hypothetical protein OsJ_29332 [Oryza sativa Japonica Group]
Length = 548
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD+ + M+ G GK VELF + K + +AVT V +LTA
Sbjct: 252 MPGRDSVAWTTMIAGCVNAGKAAEAVELFWRMRKANAKVDAVTMVALLTA 301
>gi|357125724|ref|XP_003564540.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Brachypodium distachyon]
Length = 652
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVTLM 63
RD + AMM AKN ++ VE+F + K G P++ T + AYGK+K F M
Sbjct: 507 RDPSVHRAMMDLFAKNRRHRSVVEVFDEMRKLGHLPDSETIATAMNAYGKLKEFDKAAM 565
>gi|357155797|ref|XP_003577241.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Brachypodium distachyon]
Length = 519
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVL 49
M R + + M+ G + NG+ G++LF + + G P+AVTF+GVL
Sbjct: 331 MRQRTVVSWNTMISGFSLNGQGVEGIDLFREMMRSGENPDAVTFLGVL 378
>gi|302794079|ref|XP_002978804.1| hypothetical protein SELMODRAFT_109249 [Selaginella moellendorffii]
gi|300153613|gb|EFJ20251.1| hypothetical protein SELMODRAFT_109249 [Selaginella moellendorffii]
Length = 222
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGK 54
P RDA +A++ A+N G GV +F + G PN +TFV VL G
Sbjct: 69 PLRDAALWNALIAAFARNELAGFGVAVFREMVADGVAPNEITFVSVLCCCGH 120
>gi|297829948|ref|XP_002882856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328696|gb|EFH59115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 753
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA--YGKIKIFGV 60
D T SAM+ LA++G + +F S++ RG +PN F+GVL A +G + GV
Sbjct: 525 DVATYSAMISSLAQHGSAHDALNIFESMKTRGIKPNQQAFLGVLIACCHGGLVTHGV 581
>gi|224577079|gb|ACN57213.1| At1g59720-like protein [Capsella grandiflora]
Length = 180
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP--RPNAVTFVGVLTA 51
M RD + +AM+LG A +G+ ++ F + K+G +PN+VTFV +L A
Sbjct: 75 MQKRDLASWNAMILGFATHGRAEEAMDCFDHMVKKGENXKPNSVTFVALLIA 126
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPR---PNAVTFVGVLTA 51
MP RD + + ++ G A+NG ++L+ + GP PN VTFVGVL A
Sbjct: 407 MPERDIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCA 459
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ + ++M+ G AK+G +E+F + + G +PN +T+V VL+A
Sbjct: 498 MEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSA 547
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ + ++M+ G AK+G +E+F + + G +PN +T+V VL+A
Sbjct: 318 MEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSA 367
>gi|357450533|ref|XP_003595543.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484591|gb|AES65794.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 958
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ T ++M+ G A+NG+ + LF + K G +P+++TFV VL A
Sbjct: 749 MEVRNLITWNSMVSGFAQNGRGVEALALFEDMIKEGIKPDSITFVAVLFA 798
>gi|302805464|ref|XP_002984483.1| hypothetical protein SELMODRAFT_20613 [Selaginella moellendorffii]
gi|300147871|gb|EFJ14533.1| hypothetical protein SELMODRAFT_20613 [Selaginella moellendorffii]
Length = 550
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGK 54
M RDA + + M+ G A+NG+ +++F ++ +G P +T+ VLTA G+
Sbjct: 398 MAERDAISWNVMIAGYAQNGEIASSLDIFSAMRLQGVLPEDLTYTAVLTACGR 450
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ + ++M+ G AK+G +E+F + + G +PN +T+V VL+A
Sbjct: 323 MEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSA 372
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ + ++M+ G AK+G +E+F + + G +PN +T+V VL+A
Sbjct: 186 MEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSA 235
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ + ++M+ G AK+G +E+F + + G +PN +T+V VL+A
Sbjct: 516 MEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSA 565
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVL 49
M R+ T ++ + GLA NG +ELF +E G PN VTFV VL
Sbjct: 317 MRERNIYTWTSALSGLAMNGMGEECLELFKRMESAGMEPNGVTFVAVL 364
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP RD +AM+ G + G++ + LF ++K G + VT V VLTA +
Sbjct: 216 MPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQKAGVAVSEVTLVSVLTACAQ------- 268
Query: 62 LMGIQPQNLWYY 73
MG + +W +
Sbjct: 269 -MGALERGMWVH 279
>gi|414886077|tpg|DAA62091.1| TPA: methyltransferase small domain protein [Zea mays]
Length = 656
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + S M+ G + G++ M ++LF S+ PN VT L+A
Sbjct: 369 MPERDTVSWSTMISGYVQTGRSDMALKLFYSMLNTSIEPNEVTLASALSA 418
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 29/41 (70%)
Query: 11 SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+AM+ LA +G M ++LF +++ +PN++TF+GVL+A
Sbjct: 481 NAMICSLAIHGYAHMSLDLFSQLQRTSIKPNSITFIGVLSA 521
>gi|302808009|ref|XP_002985699.1| hypothetical protein SELMODRAFT_122941 [Selaginella
moellendorffii]
gi|300146608|gb|EFJ13277.1| hypothetical protein SELMODRAFT_122941 [Selaginella
moellendorffii]
Length = 175
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIK 56
P ++ SAM+ A++G + V F +++ G RPN +TF+ VL A G +
Sbjct: 22 PQKNVVAWSAMISAYARHGLHSDAVRTFSTMDLEGVRPNKITFLNVLDACGSAR 75
>gi|224097410|ref|XP_002310922.1| predicted protein [Populus trichocarpa]
gi|222850742|gb|EEE88289.1| predicted protein [Populus trichocarpa]
Length = 554
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRG---PRPNAVTFVGVLTA 51
MP R A + ++++ AK G +E+F S+++ G RP+ +TF+GVL A
Sbjct: 329 MPERSAVSWTSLITAFAKQGYAQAVLEIFRSMQRLGTSEARPDGITFIGVLCA 381
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP R+ + + M+ G AKNGK + LF + K G + V + LTA ++
Sbjct: 224 MPERNVVSWTTMISGYAKNGKCKQALNLFDQMRKAGVELDQVVLLAALTACAEL 277
>gi|414864686|tpg|DAA43243.1| TPA: hypothetical protein ZEAMMB73_488594 [Zea mays]
Length = 484
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP +D + + +++G A +G+ +E+F ++ G PN TFV VLTA
Sbjct: 174 MPGKDVISWNTIIIGYAIHGQGKTALEMFDEMKCNGIEPNESTFVSVLTA 223
>gi|356559204|ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 619
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 41/77 (53%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVTLMG 64
+D T + ++ GLA +G + LF +++ G RP+ VTFVG+L+A + + L+
Sbjct: 391 KDIITWNTIINGLAMHGHVADALSLFERMKRAGERPDGVTFVGILSACTHMGLVRNGLLH 450
Query: 65 IQPQNLWYYIDGQIDAW 81
Q Y I QI+ +
Sbjct: 451 FQSMVDDYSIVPQIEHY 467
>gi|302775039|ref|XP_002970936.1| hypothetical protein SELMODRAFT_94326 [Selaginella moellendorffii]
gi|300161647|gb|EFJ28262.1| hypothetical protein SELMODRAFT_94326 [Selaginella moellendorffii]
Length = 632
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIK 56
MP R SA++ A+NG +F +E G RP+ VTFV +L A G ++
Sbjct: 139 MPERTVVAWSALIAACAQNGCERNAFRIFRLMELEGVRPDHVTFVSMLAACGSLE 193
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RDA AM+ G A NG ++LF +++ G +P+ T VG L+A
Sbjct: 103 MKNRDAVAWGAMVGGYASNGHPREALDLFFAMQMEGAKPDCYTVVGALSA 152
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD T +A++LGLA NG + +F + + P+ VTF+GVLTA
Sbjct: 319 RDKFTWTAVILGLAVNGHGEEAINMFYRMLRVFEAPDEVTFIGVLTA 365
>gi|413943774|gb|AFW76423.1| hypothetical protein ZEAMMB73_944105 [Zea mays]
Length = 446
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
M RD + +AM++G A+NG+ + LF + P++VT +GVL+A G
Sbjct: 210 MAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACG 261
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
M RD + +AM++G A+NG+ + LF + P++VT +GVL+A G
Sbjct: 452 MAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACG 503
>gi|404352696|gb|AFR61346.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352728|gb|AFR61362.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
Length = 202
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP--RPNAVTFVGVLTA 51
M RD + +AM+LG A +G+ ++ F + K G +PN+VTFV +L A
Sbjct: 86 MQKRDLASLNAMILGFATHGRAEEALDCFDCMVKEGKNVKPNSVTFVALLIA 137
>gi|302826620|ref|XP_002994740.1| hypothetical protein SELMODRAFT_139075 [Selaginella moellendorffii]
gi|300136998|gb|EFJ04197.1| hypothetical protein SELMODRAFT_139075 [Selaginella moellendorffii]
Length = 193
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 11 SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGK--------IKIFGVTL 62
+ ++ G A+NG + +ELF ++ G P+ VTF+G+LTA + I+ ++
Sbjct: 41 TTLLQGYAENGCEEVAIELFQEMDLSGVEPDEVTFLGLLTALCQVGKLEDCLIQFASMSE 100
Query: 63 MGIQPQNLWY 72
G++P + Y
Sbjct: 101 RGLRPSSEHY 110
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
M RD + +AM++G A+NG+ + LF + P++VT +GVL+A G
Sbjct: 452 MAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACG 503
>gi|404352752|gb|AFR61374.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
Length = 202
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP--RPNAVTFVGVLTA 51
M RD + +AM+LG A +G+ ++ F + K G +PN+VTFV +L A
Sbjct: 86 MQKRDLASLNAMILGFATHGRAEEALDCFDCMVKEGKNVKPNSVTFVALLIA 137
>gi|404352556|gb|AFR61276.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352612|gb|AFR61304.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352706|gb|AFR61351.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352712|gb|AFR61354.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352740|gb|AFR61368.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352756|gb|AFR61376.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352768|gb|AFR61382.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352810|gb|AFR61403.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352848|gb|AFR61421.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352850|gb|AFR61422.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352852|gb|AFR61423.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352856|gb|AFR61425.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352860|gb|AFR61427.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352862|gb|AFR61428.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352864|gb|AFR61429.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352868|gb|AFR61431.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352872|gb|AFR61433.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352876|gb|AFR61435.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352878|gb|AFR61436.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352880|gb|AFR61437.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352884|gb|AFR61439.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352886|gb|AFR61440.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
Length = 202
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP--RPNAVTFVGVLTA 51
M RD + +AM+LG A +G+ ++ F + K G +PN+VTFV +L A
Sbjct: 86 MQKRDLASLNAMILGFATHGRAEEALDCFDCMVKEGKNVKPNSVTFVALLIA 137
>gi|295828400|gb|ADG37869.1| AT1G13410-like protein [Neslia paniculata]
Length = 185
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVTLMG 64
RD + + M+ G A +G ++LF ++ G RP+ VTFVGVL A MG
Sbjct: 30 RDLISWNTMINGFAAHGHGTEALDLFHEMKNCGIRPDKVTFVGVLCACKH--------MG 81
Query: 65 IQPQNLWYY 73
+ L Y+
Sbjct: 82 LVEDGLAYF 90
>gi|302784955|ref|XP_002974249.1| hypothetical protein SELMODRAFT_101474 [Selaginella moellendorffii]
gi|300157847|gb|EFJ24471.1| hypothetical protein SELMODRAFT_101474 [Selaginella moellendorffii]
Length = 364
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 26/41 (63%)
Query: 11 SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
SAM+ GLA+NG + V LF + G P+AVTFV VL A
Sbjct: 213 SAMVGGLARNGYSRESVALFREMLAYGAAPDAVTFVSVLAA 253
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 28/41 (68%)
Query: 11 SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+++++GL NG+ + F+ +EK G +P+ VTFVG+L+
Sbjct: 275 NSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSG 315
>gi|357117625|ref|XP_003560564.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g16470-like [Brachypodium distachyon]
Length = 435
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
P R+ T +A++ G ++G G + LF + + G RPN VTF+ VL+A
Sbjct: 199 PERNVTMWTAVISGHGQHGHVGEALALFDQMTRDGFRPNDVTFLAVLSA 247
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP R +A++ G + G +E+F S+ G RP+ TF VL A ++
Sbjct: 96 MPRRGVVAWNALISGCTRGGLESQALEMFGSMRAEGLRPDQFTFSSVLCACARL 149
>gi|326515404|dbj|BAK03615.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + M+ G A NG G++LF +++ G P A TFV VL A
Sbjct: 261 MPDRDMASWHLMIEGYAANGLGDAGLQLFEEMKRCGMAPTARTFVLVLDA 310
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 28/41 (68%)
Query: 11 SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+++++GL NG+ + F+ +EK G +P+ VTFVG+L+
Sbjct: 203 NSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSG 243
>gi|242032375|ref|XP_002463582.1| hypothetical protein SORBIDRAFT_01g002460 [Sorghum bicolor]
gi|241917436|gb|EER90580.1| hypothetical protein SORBIDRAFT_01g002460 [Sorghum bicolor]
Length = 610
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVE--LFMSIEKRGPRPNAVTFVGVLTAYGKIKIFG 59
MP RD +A++ G A+NG + +E + M E+ G +P+++T V VL A ++ G
Sbjct: 120 MPARDRVAWNALVAGYARNGLPALAMEAVVRMQGEEGGEQPDSITLVSVLPACADARVLG 179
>gi|414887968|tpg|DAA63982.1| TPA: hypothetical protein ZEAMMB73_972364 [Zea mays]
Length = 700
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLT---AYGKIKIFGVT 61
+D +AM+ G A+NG + + LF S+ + G P+ +T VGVL+ A G +K+ GV
Sbjct: 283 KDVVAWNAMITGYAQNGMSNEAIALFHSMREAGLCPDKITLVGVLSSCAAVGALKL-GVE 341
Query: 62 L 62
L
Sbjct: 342 L 342
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF-MSIEKRGPRPNAVTFVGVLTA 51
MP ++ + +A++ GLA NG+ ++ F + +++G +P+ +TF+GVL+A
Sbjct: 381 MPFKNEASWNALICGLAFNGRGYDAIQQFELMRDEKGLQPDDITFIGVLSA 431
>gi|302773754|ref|XP_002970294.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
gi|300161810|gb|EFJ28424.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
Length = 1096
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIK 56
+A T +AM+ GLA++G++ +E F +E G R N+VT++ L A +K
Sbjct: 589 NAVTWNAMISGLAQHGESKQALECFWKMELEGVRANSVTYLASLEACSSLK 639
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 28/54 (51%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP RD + + M+ A++G +E F ++ G P+ T++G + A G +
Sbjct: 685 MPERDVISWNTMIATYAQHGSGRQALEFFKQMDLEGWTPDRATYLGAIDACGSV 738
>gi|302780547|ref|XP_002972048.1| hypothetical protein SELMODRAFT_96927 [Selaginella moellendorffii]
gi|300160347|gb|EFJ26965.1| hypothetical protein SELMODRAFT_96927 [Selaginella moellendorffii]
Length = 606
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 9 TSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
T S+M+ A+NG G ++LF S+E+ G +P++VTF VL A
Sbjct: 302 TFSSMVAAYARNGHFGDALKLFWSMEQDGYKPDSVTFTHVLYA 344
>gi|242061948|ref|XP_002452263.1| hypothetical protein SORBIDRAFT_04g022670 [Sorghum bicolor]
gi|241932094|gb|EES05239.1| hypothetical protein SORBIDRAFT_04g022670 [Sorghum bicolor]
Length = 603
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + ++M+ G + NG + +F + G RP VTF+ VLTA
Sbjct: 372 MPERDFISWNSMVTGFSHNGLGKQSLAIFEEMLVAGVRPTHVTFLAVLTA 421
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MMP +D +A++ G +NG+ +ELF + G P V VL A K+
Sbjct: 267 MMPDKDRVAWTALISGHEQNGEEDTALELFERMLAEGVSPTTFALVSVLGACAKL 321
>gi|223948849|gb|ACN28508.1| unknown [Zea mays]
gi|413937254|gb|AFW71805.1| hypothetical protein ZEAMMB73_337002 [Zea mays]
Length = 608
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + ++M+ G + NG + +F + G RP VTF+ VLTA
Sbjct: 368 MPERDFISWNSMVTGFSHNGLGKQSLAIFEEMLVAGVRPTHVTFLAVLTA 417
>gi|293336045|ref|NP_001168520.1| uncharacterized protein LOC100382300 [Zea mays]
gi|195615774|gb|ACG29717.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
gi|223946951|gb|ACN27559.1| unknown [Zea mays]
Length = 616
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + ++M+ G + NG + +F + G RP VTF+ VLTA
Sbjct: 376 MPERDFISWNSMVTGFSHNGLGKQSLAIFEEMLVAGVRPTHVTFLAVLTA 425
>gi|125553513|gb|EAY99222.1| hypothetical protein OsI_21180 [Oryza sativa Indica Group]
Length = 818
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Query: 11 SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVTLMGIQPQNL 70
+AM+ GLA +G+ +ELF + G +P+++TF +LTA + G+ G
Sbjct: 515 NAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTA---CRSMGLVTEG------ 565
Query: 71 WYYIDG 76
W Y DG
Sbjct: 566 WEYFDG 571
>gi|302798965|ref|XP_002981242.1| hypothetical protein SELMODRAFT_113974 [Selaginella moellendorffii]
gi|300151296|gb|EFJ17943.1| hypothetical protein SELMODRAFT_113974 [Selaginella moellendorffii]
Length = 734
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T + M+ G A+ G + +ELF ++ G P++VTF VL A
Sbjct: 474 MESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQA 523
>gi|302801912|ref|XP_002982712.1| hypothetical protein SELMODRAFT_116683 [Selaginella moellendorffii]
gi|300149811|gb|EFJ16465.1| hypothetical protein SELMODRAFT_116683 [Selaginella moellendorffii]
Length = 734
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T + M+ G A+ G + +ELF ++ G P++VTF VL A
Sbjct: 474 MESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQA 523
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGK 54
D T +A++ L K+G+ LF S+E RG +PNAVTF ++ K
Sbjct: 250 DQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 298
>gi|297740419|emb|CBI30601.3| unnamed protein product [Vitis vinifera]
Length = 501
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+ P R + SAM+ GLA++G ++LF + K G PN +T V VL A
Sbjct: 307 LKPDRGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGA 357
>gi|224054634|ref|XP_002298341.1| predicted protein [Populus trichocarpa]
gi|222845599|gb|EEE83146.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEK-RGPRPNAVTFVGVLTA 51
MMP R+ T ++M+ G A +G +ELF +EK G + + +TF VLTA
Sbjct: 241 MMPERNTVTWNSMIFGYANHGYCDEAIELFDQMEKSEGNKLDHLTFTAVLTA 292
>gi|356515150|ref|XP_003526264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g10330-like [Glycine max]
Length = 503
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLT--AYGKIKIF 58
+M R+ T +AM+ LA +G+ +++F ++ G +PN++TF VLT A G +
Sbjct: 317 VMVVREVCTWNAMISSLASHGREKNALDMFDRMKLHGLKPNSITFAAVLTACARGNLVRE 376
Query: 59 GVTLMGIQPQNLWY 72
G+ L +++WY
Sbjct: 377 GLDLF----RSMWY 386
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
+P +D +AM+ G A++G + LF ++K G +P+ +TFV VL A G+
Sbjct: 324 IPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHA---GLV 380
Query: 62 LMGIQ 66
+G+Q
Sbjct: 381 DLGVQ 385
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVL 49
M R T +AM+ G +NG+ G+ LF ++ + G +PNA++ VL
Sbjct: 223 MSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVL 270
>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
Length = 1073
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D + +AM+ G A +G++ +LF +++ G +PN TF+ +L+A
Sbjct: 161 MEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSA 210
>gi|242072866|ref|XP_002446369.1| hypothetical protein SORBIDRAFT_06g014910 [Sorghum bicolor]
gi|241937552|gb|EES10697.1| hypothetical protein SORBIDRAFT_06g014910 [Sorghum bicolor]
Length = 474
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP RDAT+ ++ G AK G+ V LF + + G RP++V V VL+ ++
Sbjct: 189 MPVRDATSWGTVIAGCAKAGRLEEAVLLFDRMREEGFRPDSVALVAVLSCCAQL 242
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T +AM+ G +++G + LF + G PN VTFVGVL+A
Sbjct: 389 MRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSA 438
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSI-EKRGPRPNAVTFVGVLTAYGKIKIFG 59
MP RD +A++ G A+NG V + + + E+ G RP+AVT V VL A + G
Sbjct: 286 MPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALG 344
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R T +AM+ G +G + VELF ++ G PN TF+ VL+A
Sbjct: 593 RHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSA 639
>gi|302794572|ref|XP_002979050.1| hypothetical protein SELMODRAFT_152973 [Selaginella moellendorffii]
gi|300153368|gb|EFJ20007.1| hypothetical protein SELMODRAFT_152973 [Selaginella moellendorffii]
Length = 871
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 30/47 (63%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD + ++++ A+N G +ELF+ ++ +G P+ +TFV +L+A
Sbjct: 710 RDVVSWNSIIAAYARNATAGQALELFLEMQLQGIAPDGITFVSILSA 756
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP-RPNAVTFVGVLTA 51
MP R+ + +AM+ G A+N K +ELF ++ G PN VT V VL+A
Sbjct: 250 MPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSA 300
>gi|357447703|ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365519|gb|ABN09753.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483175|gb|AES64378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 5 RDATTS----SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD +S +A++ GLA +G M +E+F +++ +PN +TF+GVL+A
Sbjct: 511 RDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSA 561
>gi|302793969|ref|XP_002978749.1| hypothetical protein SELMODRAFT_109214 [Selaginella moellendorffii]
gi|300153558|gb|EFJ20196.1| hypothetical protein SELMODRAFT_109214 [Selaginella moellendorffii]
Length = 429
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKI 57
P RD + +AM+ A +G +ELF ++ G P+A+ FV VL A I I
Sbjct: 125 PERDLVSWTAMVAAYAHSGYGQRALELFRAMVAEGHHPDAIAFVSVLNACSHIGI 179
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+MP ++ + ++M+ G A+NG + LF + G P AVTFVG+L A
Sbjct: 509 VMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVGILFA 559
>gi|242033621|ref|XP_002464205.1| hypothetical protein SORBIDRAFT_01g014070 [Sorghum bicolor]
gi|241918059|gb|EER91203.1| hypothetical protein SORBIDRAFT_01g014070 [Sorghum bicolor]
Length = 521
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 8 TTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
++ ++MM GLA +G+ V LF + G P+ VTF+ VLTAYG
Sbjct: 334 SSWNSMMQGLAVHGQWREAVALFSELRSYGLSPDNVTFIAVLTAYG 379
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + +AM++G A +G +ELF ++ G PN V F+ VLTA
Sbjct: 462 MRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTA 511
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 38/85 (44%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVTL 62
P RD+ T +AM+ G A +G +ELF + +PN TFV VL A + L
Sbjct: 623 PKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGL 682
Query: 63 MGIQPQNLWYYIDGQIDAWQAACQI 87
Q Y ++ Q++ + I
Sbjct: 683 FYFQKMASIYALEPQLEHYSCMVDI 707
>gi|302770356|ref|XP_002968597.1| hypothetical protein SELMODRAFT_89230 [Selaginella moellendorffii]
gi|300164241|gb|EFJ30851.1| hypothetical protein SELMODRAFT_89230 [Selaginella moellendorffii]
Length = 631
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 4 PRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
P + +AM+ G A +G+ + ++ F + G RPN VTFV +L A
Sbjct: 117 PNSVVSWTAMISGFALHGREDLALDFFRKMVAEGVRPNEVTFVSILGA 164
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
M +D T +AM+ G A+NG + ++LF + P+ +T +G+L+A I
Sbjct: 289 MKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASI 342
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP--RPNAVTFVGVLTA 51
MP ++ + +AM+ LA +G+ + LF S+ G PN +TFVGVL+A
Sbjct: 390 MPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSA 441
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
M +D T +AM+ G A+NG + ++LF + P+ +T +G+L+A I
Sbjct: 289 MKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASI 342
>gi|359474320|ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
Length = 580
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAY 52
+D +AM+LG NGK ++LF + PN++TF+G+LTAY
Sbjct: 399 KDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAY 446
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D T +A++ G A+ GK + LF S+ G +P+ VTF+GVL+A
Sbjct: 440 KDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSA 486
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
MP R+ + S+M+ A +G+ + LF +++ PN VTFVGVL YG
Sbjct: 408 MPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVL--YG 457
>gi|404352550|gb|AFR61273.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352552|gb|AFR61274.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352562|gb|AFR61279.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352564|gb|AFR61280.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352566|gb|AFR61281.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352570|gb|AFR61283.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352574|gb|AFR61285.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352576|gb|AFR61286.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352578|gb|AFR61287.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352582|gb|AFR61289.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352590|gb|AFR61293.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352594|gb|AFR61295.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352598|gb|AFR61297.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352600|gb|AFR61298.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352602|gb|AFR61299.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352604|gb|AFR61300.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352606|gb|AFR61301.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352610|gb|AFR61303.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352776|gb|AFR61386.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352780|gb|AFR61388.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352784|gb|AFR61390.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352792|gb|AFR61394.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352796|gb|AFR61396.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352804|gb|AFR61400.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352815|gb|AFR61405.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352822|gb|AFR61408.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352846|gb|AFR61420.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
Length = 202
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP--RPNAVTFVGVLTA 51
M RD + +AM+LG A +G+ ++ F + K G +PN+VTFV +L A
Sbjct: 86 MRKRDLASLNAMILGFATHGRAEEALDCFDCMVKEGKNVKPNSVTFVALLIA 137
>gi|359479080|ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial [Vitis vinifera]
Length = 744
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 11 SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
++M+ G A+NG +ELF + G +PN +TF+GVL+A
Sbjct: 569 NSMITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSA 609
>gi|345505226|gb|AEN99837.1| chlororespiratory reduction 4, partial [Lobularia maritima]
Length = 570
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 11 SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+AM+ GLA +G ++ M IEKR +P+ +TFVGVL A
Sbjct: 384 NAMIGGLAVHGLGEAAFDMLMEIEKRFIKPDYITFVGVLNA 424
>gi|302795755|ref|XP_002979640.1| hypothetical protein SELMODRAFT_111471 [Selaginella moellendorffii]
gi|300152400|gb|EFJ19042.1| hypothetical protein SELMODRAFT_111471 [Selaginella moellendorffii]
Length = 235
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP + + + + G A+ G + +EL+ ++ G +PN VT +GVLTA T
Sbjct: 59 MPTPNQISWTCTIAGYAQQGHSTEALELYQKMDLEGTKPNQVTLLGVLTA--------CT 110
Query: 62 LMGIQPQNLWYY 73
G+ ++YY
Sbjct: 111 HAGLVEDGIYYY 122
>gi|115441783|ref|NP_001045171.1| Os01g0913400 [Oryza sativa Japonica Group]
gi|56784407|dbj|BAD82446.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113534702|dbj|BAF07085.1| Os01g0913400 [Oryza sativa Japonica Group]
Length = 712
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 27/50 (54%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD SA + AK+G G V LF+ + + G PN+ T VG L A
Sbjct: 116 MPVRDLVACSAAIYRHAKSGLFGEAVRLFVGMMRVGVSPNSFTLVGALIA 165
>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 558
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ T +A++ GL +G++ + +F S+ K G +P+ VTF GVL A
Sbjct: 247 MAVRNVLTWTALINGLGVHGRSTEALAMFHSMRKSGVQPDYVTFSGVLVA 296
>gi|297823223|ref|XP_002879494.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325333|gb|EFH55753.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 473
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R++ T MM LAKNG+ V++F S ++ G +P+ F V A
Sbjct: 170 MPERNSETWCIMMRCLAKNGEGERAVDMFTSFKEEGNKPDKEIFKAVFFA 219
>gi|359497527|ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
gi|296083555|emb|CBI23551.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAY 52
+D +AM+LG NGK ++LF + PN++TF+G+LTAY
Sbjct: 399 KDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAY 446
>gi|413946997|gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays]
Length = 505
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M + T + ++ G A +G VE+F +E+ PNAVTF+ +L+A + G+T
Sbjct: 271 MEEKSVVTWTTLIAGFALHGLGLQAVEMFCRMERENMAPNAVTFLAILSACSHV---GLT 327
Query: 62 LMGIQPQNLWYY 73
+G WY+
Sbjct: 328 DLG-----RWYF 334
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R + +AM+ G A +G+ ++F + K G P+ +TFVG+L+A
Sbjct: 399 MHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSA 448
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 9/77 (11%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA---YGKIK- 56
M +D + ++M++G AKNG + +F +++ P+ VTF+GVLTA G++
Sbjct: 793 MSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSE 852
Query: 57 ---IFG--VTLMGIQPQ 68
IF V L G+QP+
Sbjct: 853 GRLIFDMMVNLYGMQPR 869
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 39.7 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGK 54
D T +A++ L K+G+ LF S+E RG +PNAVTF ++ K
Sbjct: 428 DQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 476
>gi|414879049|tpg|DAA56180.1| TPA: hypothetical protein ZEAMMB73_301223 [Zea mays]
Length = 534
Score = 39.7 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P DA +A++ GLA +G + + +F + +P+ +TFVGVLTA
Sbjct: 338 IPRPDAYPYTALISGLATHGHENLALSVFERMRAEDIKPHPITFVGVLTA 387
>gi|357486825|ref|XP_003613700.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515035|gb|AES96658.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 188
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ A++ GLA +G++G +++F +++ G +P+ V F+GVL A
Sbjct: 75 MPERNIVMWIALINGLAVHGRSGEALKVFDVMKESGLKPDGVLFIGVLVA 124
>gi|302798793|ref|XP_002981156.1| hypothetical protein SELMODRAFT_114102 [Selaginella moellendorffii]
gi|300151210|gb|EFJ17857.1| hypothetical protein SELMODRAFT_114102 [Selaginella moellendorffii]
Length = 502
Score = 39.7 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 34/54 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP RD + + ++ A+NG + +ELF +E +G +P++VTFV ++ + ++
Sbjct: 68 MPVRDVVSWNIILAANARNGDFKVVLELFRKMEHQGIKPSSVTFVTLVQSLARL 121
>gi|296084001|emb|CBI24389.3| unnamed protein product [Vitis vinifera]
Length = 665
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 11 SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
++M+ G A+NG +ELF + G +PN +TF+GVL+A
Sbjct: 490 NSMITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSA 530
>gi|224577097|gb|ACN57222.1| At1g59720-like protein [Capsella grandiflora]
gi|224577099|gb|ACN57223.1| At1g59720-like protein [Capsella grandiflora]
Length = 180
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP--RPNAVTFVGVLTA 51
M RD + +AM+LG A +G+ ++ F + K+G +PN+VTFV +L A
Sbjct: 75 MQKRDLASWNAMILGFAXHGRAXEAMDCFDRMVKKGENIKPNSVTFVALLIA 126
>gi|357161281|ref|XP_003579039.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Brachypodium distachyon]
Length = 698
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
D ++M++G A NG +EL + RG RP TFVGVL+A
Sbjct: 514 DEVLWNSMLIGYASNGHGHKALELLELMRARGIRPTERTFVGVLSA 559
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD +AM+ ++NG G ++LF +++ G RP+ +FV VL+A
Sbjct: 596 RDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSA 642
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD +AM+ ++NG G ++LF +++ G RP+ +FV VL+A
Sbjct: 596 RDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSA 642
>gi|302807259|ref|XP_002985342.1| hypothetical protein SELMODRAFT_122264 [Selaginella moellendorffii]
gi|300146805|gb|EFJ13472.1| hypothetical protein SELMODRAFT_122264 [Selaginella moellendorffii]
Length = 404
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP + + + + G A+ G + +EL+ ++ G +PN VT +GVLTA T
Sbjct: 228 MPTPNQISWTCTIAGYAQQGHSTEALELYQKMDLEGTKPNQVTLLGVLTA--------CT 279
Query: 62 LMGIQPQNLWYY 73
G+ ++YY
Sbjct: 280 HAGLVEDGIYYY 291
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGK 54
DA T S +M GL K G+ V L +EK+G PN VT+ VL ++ K
Sbjct: 345 DAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCK 393
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVL 49
D T S+++ GL++ GK ++ F E+ G RPNAVTF ++
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP ++ + + M+ G ++NG +E F + + G RPN T V L+A KI
Sbjct: 267 MPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKI 320
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD SAM++ A +G + +F +++ G RP+ +TF+G+L A
Sbjct: 292 MRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYA 341
>gi|357138636|ref|XP_003570896.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Brachypodium distachyon]
Length = 500
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIK 56
D T + ++LGL + GK L ++KRG PNA TF ++T + K +
Sbjct: 343 DIVTYNTLILGLCREGKVKESEHLLQELDKRGLEPNASTFAALITGHWKTQ 393
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 31/47 (65%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+ A + +AM++G +G+ ++LF +++ G P+ +TF+GVLTA
Sbjct: 645 KSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTA 691
>gi|280967731|gb|ACZ98537.1| PPR motif protein [Malus x domestica]
Length = 751
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+A ++M++G +NG N +E+F + + G P VT L+A
Sbjct: 160 MPQRNAVAWNSMIVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSA 209
>gi|242079801|ref|XP_002444669.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
gi|241941019|gb|EES14164.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
Length = 581
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP-RPNAVTFVGVLTA 51
RD + +AM++G NG ++LF +E G PN VTF+GVLT+
Sbjct: 361 RDVFSWTAMIMGFTVNGLCSEALDLFAQMEGEGKVMPNEVTFLGVLTS 408
>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D + + +++G A +G+ + +E+F ++ G +PN TFV VLTA
Sbjct: 473 MAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTA 522
>gi|356564579|ref|XP_003550529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Glycine max]
Length = 576
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAY 52
RD SAM+ G NGK ++LF + PN VT+ G+LTAY
Sbjct: 395 RDLVAYSAMIYGCGINGKASDAIKLFEQMLAECIGPNLVTYTGLLTAY 442
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIK 56
D T S M+ GL+K G+ G V +F S+E RG PN V + ++ K +
Sbjct: 125 DVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR 175
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIK 56
D T S M+ GL+K G+ G V +F S+E RG PN V + ++ K +
Sbjct: 406 DVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR 456
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIK 56
D T S M+ GL+K G+ G V +F S+E RG PN V + ++ K +
Sbjct: 398 DVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR 448
>gi|222628408|gb|EEE60540.1| hypothetical protein OsJ_13880 [Oryza sativa Japonica Group]
Length = 594
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 32/54 (59%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP +D + SAM+ G A++ K + LF +++ G +P+ +T + V++A +
Sbjct: 262 MPAKDVVSWSAMIAGYAESSKPMEALNLFHDMQRSGVKPDEITMLSVISACANV 315
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP ++ T ++++ A +G + LF +++ G +PN VTF+G+L A
Sbjct: 363 MPQKNVVTWTSIITASAMHGDGRSALTLFENMKSEGIQPNGVTFLGLLYA 412
>gi|302792220|ref|XP_002977876.1| hypothetical protein SELMODRAFT_107453 [Selaginella moellendorffii]
gi|300154579|gb|EFJ21214.1| hypothetical protein SELMODRAFT_107453 [Selaginella moellendorffii]
Length = 485
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R++ T +AM+ A+NG + +ELF + G P+ VTF+ +L+A
Sbjct: 325 MPWRNSITWNAMLTAYAQNGHSAEALELFPVMILDGAEPSEVTFITLLSA 374
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 33/61 (54%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP RD + M+ G A+NG + + L + + + G RP+++T V +L A ++ +
Sbjct: 91 MPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIG 150
Query: 62 L 62
+
Sbjct: 151 M 151
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MM R T +AM+ G +G VELF ++K +PN +TF+ L+A
Sbjct: 393 MMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSA 443
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R ++ +AM+ G A +G+ ++F + K G P+ +TFVG+L+A
Sbjct: 399 MLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSA 448
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M RD + ++ G AK+G++G+ + L+ +E G P+ +TF+ VL + +
Sbjct: 484 MSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVL--------YACS 535
Query: 62 LMGIQPQNLWYYIDGQID 79
G+Q Q +I Q D
Sbjct: 536 HAGLQEQGKQLFISIQSD 553
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
+P RD + SAM+ A+ +E + ++ G RPN TF VL A +
Sbjct: 281 LPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASV 334
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M RD + ++ G AK+G++G+ + L+ +E G P+ +TF+ VL + +
Sbjct: 485 MSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVL--------YACS 536
Query: 62 LMGIQPQNLWYYIDGQID 79
G+Q Q +I Q D
Sbjct: 537 HAGLQEQGKQLFISIQSD 554
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
+P RD + SAM+ A+ +E + ++ G RPN TF VL A +
Sbjct: 282 LPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASV 335
>gi|302819926|ref|XP_002991632.1| hypothetical protein SELMODRAFT_72370 [Selaginella
moellendorffii]
gi|300140665|gb|EFJ07386.1| hypothetical protein SELMODRAFT_72370 [Selaginella
moellendorffii]
Length = 140
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 11 SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKI 57
+AM+ G A NG + +ELF ++ G RP+ TFVGVL A + +
Sbjct: 32 NAMIQGYAHNGHSREALELFGAMVVEGVRPDQATFVGVLAACNHVGV 78
>gi|404352842|gb|AFR61418.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
Length = 202
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP--RPNAVTFVGVLTA 51
M RD + +AM+LG A +GK + F + K G +PN+VTFV +L A
Sbjct: 86 MQKRDLASLNAMILGFATHGKAEEAMNCFDCMVKEGKNVKPNSVTFVALLIA 137
>gi|302782483|ref|XP_002973015.1| hypothetical protein SELMODRAFT_98546 [Selaginella moellendorffii]
gi|300159616|gb|EFJ26236.1| hypothetical protein SELMODRAFT_98546 [Selaginella moellendorffii]
Length = 591
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGK 54
M RDA + + M+ G A+NG+ +++F ++ +G P +T+ VLTA G+
Sbjct: 207 MAERDAISWNVMIAGYAQNGEIASSLDIFSAMRLQGVLPEDLTYTAVLTACGR 259
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+M R+ + ++M+ G AK+G +E F + K G +PN VT+V +L+A
Sbjct: 534 LMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSA 584
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MM RD + + M++ + +G + LF + G RPN+VTF GVL+
Sbjct: 375 MMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSG 425
>gi|404352732|gb|AFR61364.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
Length = 202
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP--RPNAVTFVGVLTA 51
M RD + +AM+LG A +GK + F + K G +PN+VTFV +L A
Sbjct: 86 MQKRDLASLNAMILGFATHGKAEEAMNCFDCMVKEGKNVKPNSVTFVALLIA 137
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T SAM+ GLA NG +E F ++ G N+VT++ VLTA
Sbjct: 431 MSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTA 480
>gi|125573080|gb|EAZ14595.1| hypothetical protein OsJ_04518 [Oryza sativa Japonica Group]
Length = 597
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 27/50 (54%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD SA + AK+G G V LF+ + + G PN+ T VG L A
Sbjct: 1 MPVRDLVACSAAIYRHAKSGLFGEAVRLFVGMMRVGVSPNSFTLVGALIA 50
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 11 SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
SAM+ G +G+ +E+F +++ G RPN +TF+ VL A
Sbjct: 371 SAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAA 411
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 11 SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
SAM+ G +G+ +E+F +++ G RPN +TF+ VL A
Sbjct: 226 SAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAA 266
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T +AM+ ++G+ G +LF + + G RPN TF GVL A
Sbjct: 264 MVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNA 313
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
P D + ++++ G A+NG+ + F + K G +P+ +TFVGVL+A
Sbjct: 366 PQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSA 414
>gi|357511639|ref|XP_003626108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240992|gb|ABD32850.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355501123|gb|AES82326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 417
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+M RD T+ + M+ G + G N + +F ++ G +PN +TF GVL+A
Sbjct: 228 LMDERDVTSWTLMICGAVRCGFNKEALVVFEKMQMDGVKPNELTFTGVLSA 278
>gi|357128066|ref|XP_003565697.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Brachypodium distachyon]
Length = 564
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD +AM+ G A NG + ++LF + G PN T VLTA
Sbjct: 29 MPDRDVVAWTAMLSGYASNGCHSYALDLFRRMLAAGVGPNEFTLSSVLTA 78
>gi|302818974|ref|XP_002991159.1| hypothetical protein SELMODRAFT_133020 [Selaginella moellendorffii]
gi|300141090|gb|EFJ07805.1| hypothetical protein SELMODRAFT_133020 [Selaginella moellendorffii]
Length = 632
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIK 56
MP R SA++ A+NG +F +E G RP+ VTFV +L A G ++
Sbjct: 139 MPERTVVAWSALIAACAQNGCERDAFRIFRLMELEGMRPDHVTFVSMLAACGSLE 193
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P RD + +A++ G A+ G + +E+F + G PN VT+ +LTA
Sbjct: 214 LPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTA 263
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF--MSIEKRGPRPNAVTFVGVLT--AYGKIKI 57
MP R A + +AM++G +K+G +ELF M EKR +P+AVT + VL+ ++G+++
Sbjct: 315 MPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKR-VKPDAVTLLAVLSGCSHGRMED 373
Query: 58 FGVTL 62
G+ +
Sbjct: 374 TGLNI 378
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVL 49
M R+ T +AM++GLA+NG + LF +++ G N+VTFV ++
Sbjct: 392 MKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLV 439
>gi|147771209|emb|CAN67545.1| hypothetical protein VITISV_030949 [Vitis vinifera]
Length = 598
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 6/53 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPR---PNAVTFVGVLTA 51
MP RD + +++++G A NG+ G E ++ K G PN+VTF+GVL+A
Sbjct: 410 MPRRDVISWTSIIVGYAINGE---GEEALLAFRKMGAEKIEPNSVTFLGVLSA 459
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
MP R+ + S+M+ L+ +G+ + LF +++ PN VTFVGVL YG
Sbjct: 405 MPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVL--YG 454
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T + M+ G + +G ++LF + K RPN+VTFVGVL+A
Sbjct: 526 MVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSA 575
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVL 49
RD +T + M+ G AK+G +LF +++ G +PN ++F+ +L
Sbjct: 226 RDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSIL 270
>gi|242088973|ref|XP_002440319.1| hypothetical protein SORBIDRAFT_09g029650 [Sorghum bicolor]
gi|241945604|gb|EES18749.1| hypothetical protein SORBIDRAFT_09g029650 [Sorghum bicolor]
Length = 671
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
D + +AM++G A++G + +LF + + G +P+ VTF+GVLTA
Sbjct: 435 DVISWTAMIVGHAEHGHSKEAFQLFEEMCRVGLKPDHVTFIGVLTA 480
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + +A++ G A+ GK + LF + G +P+ VTF+GVL+A
Sbjct: 432 MNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSA 481
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ + ++M+LG A+NGK+ + L+ + +P+ +TFVGVL+A
Sbjct: 383 MLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSA 432
>gi|147799436|emb|CAN76870.1| hypothetical protein VITISV_012312 [Vitis vinifera]
Length = 420
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ + ++M+LG A+NGK+ + L+ + +P+ +TFVGVL+A
Sbjct: 71 MLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSA 120
>gi|294464140|gb|ADE77588.1| unknown [Picea sitchensis]
Length = 312
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M ++ + +AM++G +G + LF +++RG +PN +TF+ VL+A
Sbjct: 1 MSNKNVVSWNAMIVGYGMHGHGEDALVLFTQMQQRGVKPNEITFISVLSA 50
>gi|224577083|gb|ACN57215.1| At1g59720-like protein [Capsella grandiflora]
Length = 180
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP--RPNAVTFVGVLTA 51
M RD + +AM+LG A +G+ ++ F + K+G +PN+VTFV +L A
Sbjct: 75 MQKRDLASWNAMILGFATHGRAEEAMDCFDRMVKKGENVKPNSVTFVALLIA 126
>gi|357431702|gb|AET78528.1| At1g59720-like protein [Arabidopsis halleri]
Length = 163
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP--RPNAVTFVGVLTA 51
M RD + +AM+LG A +G+ ++ F + K G +PN+VTFV +L A
Sbjct: 65 MQKRDLASWNAMILGFATHGRAXEALDCFDRMVKEGKNVKPNSVTFVALLIA 116
>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 770
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R T ++M+ G +++G+ ++LF + G +PN +TFV +L+A
Sbjct: 454 MPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSA 503
>gi|224577105|gb|ACN57226.1| At1g59720-like protein [Capsella grandiflora]
Length = 180
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP--RPNAVTFVGVLTA 51
M RD + +AM+LG A +G+ ++ F + K+G +PN+VTFV +L A
Sbjct: 75 MQKRDLASWNAMILGFATHGRAEEAMDCFDRMVKKGENVKPNSVTFVALLIA 126
>gi|255540253|ref|XP_002511191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550306|gb|EEF51793.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 538
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP ++ + +A++ G +GK +ELF + + RPN VTF+ VL+A
Sbjct: 433 MPCKNVISWNALIAGYGNHGKGDDAIELFEQMLQERIRPNHVTFLAVLSA 482
>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 922
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D + +AM+ G A +G+ V+LF +++ G +PN +F+ +L+A
Sbjct: 112 MEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSA 161
>gi|115436706|ref|NP_001043111.1| Os01g0390600 [Oryza sativa Japonica Group]
gi|21328171|dbj|BAC00748.1| pentatricopeptide (PPR) repeat-containing-like protein [Oryza
sativa Japonica Group]
gi|113532642|dbj|BAF05025.1| Os01g0390600 [Oryza sativa Japonica Group]
Length = 657
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFG 59
MP RD + S ++ G ++G + M +++F S+ G PN +T L+A G
Sbjct: 368 MPERDTISWSTLISGYVQSGNSNMALQIFCSMLDAGVEPNEITLASALSAVANSGTLG 425
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M D + +A+++G A +G V LF ++++G +PN V FV VLTA
Sbjct: 368 MNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTA 417
>gi|357116286|ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 692
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 32/54 (59%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIF 58
+D + S ++ G ++NGK+ + V LF + G +PN+ T +L + ++K+F
Sbjct: 311 KDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASILPSLSEMKLF 364
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVL 49
+MP RD ++M+ G A NG + F +++K G RP+ VT V VL
Sbjct: 408 LMPKRDLVIWNSMVAGYAVNGNTDSALCAFRALQKVGFRPDHVTVVSVL 456
>gi|302796316|ref|XP_002979920.1| hypothetical protein SELMODRAFT_111891 [Selaginella moellendorffii]
gi|300152147|gb|EFJ18790.1| hypothetical protein SELMODRAFT_111891 [Selaginella moellendorffii]
Length = 719
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGK 54
MP RD + ++M+ A++G + L+ +E G +PN VTF+ + A K
Sbjct: 189 MPRRDVISWTSMIAAYAQSGSCDDAIRLYRRMELEGEKPNKVTFLAAMEACAK 241
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ + +AM+ GLA++G +E+F + G +P+ VTFV VL+A
Sbjct: 392 MKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSA 441
>gi|296082839|emb|CBI22140.3| unnamed protein product [Vitis vinifera]
Length = 428
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAY 52
+D +AM+LG NGK ++LF + PN++TF+G+LTAY
Sbjct: 247 KDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAY 294
>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ +AM+ G A+ G +ELF ++K G +P+A+T V V++A
Sbjct: 153 MPVRNLVAWTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLVSVVSA 202
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP +D T S+M++G A +G ++ F + + P+ VTF+ VL+A
Sbjct: 254 MPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAVLSA 303
>gi|242061516|ref|XP_002452047.1| hypothetical protein SORBIDRAFT_04g017510 [Sorghum bicolor]
gi|241931878|gb|EES05023.1| hypothetical protein SORBIDRAFT_04g017510 [Sorghum bicolor]
Length = 530
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
D SAM+ G A NG+ V LF ++ +G RP+A+ F +LTA
Sbjct: 348 DLAIWSAMINGYACNGEGSEAVVLFNEMQSKGVRPDAIVFTHILTA 393
>gi|125539857|gb|EAY86252.1| hypothetical protein OsI_07623 [Oryza sativa Indica Group]
Length = 629
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA--------YGKIK 56
RD +AM+ GLA NG +ELF + ++G PN TF+ VL A GK
Sbjct: 278 RDVVLWNAMIGGLAMNGYGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRV 337
Query: 57 IFGVTLMGIQPQNLWY 72
+ GI+PQ Y
Sbjct: 338 FKSMQDYGIKPQREHY 353
>gi|125526069|gb|EAY74183.1| hypothetical protein OsI_02067 [Oryza sativa Indica Group]
Length = 657
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFG 59
MP RD + S ++ G ++G + M +++F S+ G PN +T L+A G
Sbjct: 368 MPERDTISWSTLISGYVQSGNSNMALQIFCSMLDAGVEPNEITLASALSAVANSGTLG 425
>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M P+D S M+ LA +G + LF +++ +P++VTF+GVLTA
Sbjct: 417 MAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTA 467
>gi|297737154|emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M P+D S M+ LA +G + LF +++ +P++VTF+GVLTA
Sbjct: 325 MAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTA 375
>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
Length = 674
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 11 SAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
SAM+ G +G+ +E+F +++ G RPN +TF+ VL A
Sbjct: 372 SAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAA 412
>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Cucumis sativus]
Length = 908
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP R+ + +A++ GL++N +ELF+ + + G + T ++TA G +K F V+
Sbjct: 390 MPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVS 449
>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Cucumis sativus]
Length = 908
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP R+ + +A++ GL++N +ELF+ + + G + T ++TA G +K F V+
Sbjct: 390 MPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVS 449
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAY---GKIKIFGVTL 62
D ++++ G A+ G+ ++LF +++++G RPN VTF+ LTA GK++ L
Sbjct: 629 DVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGCELL 688
Query: 63 MGIQPQN 69
G+ P +
Sbjct: 689 SGMTPDH 695
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRG-PRPNAVTFVGVLTA 51
RD T +AM+ +NG ++LF +++ G P PN+VTFV VL +
Sbjct: 208 RDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDS 255
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 11/77 (14%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRG--PRPNAVTFVGVLTAYGK----- 54
MP ++ T ++++ G A G+ M + LF + RG P PN +TFV +L+A +
Sbjct: 371 MPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVE 430
Query: 55 --IKIFGV--TLMGIQP 67
+KIF + GI+P
Sbjct: 431 NGMKIFDSMKSTYGIEP 447
>gi|297734415|emb|CBI15662.3| unnamed protein product [Vitis vinifera]
Length = 657
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MMP ++ + +A++ G +G+ VE+F + G PN VTF+ VL+A
Sbjct: 393 MMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSA 443
>gi|242038163|ref|XP_002466476.1| hypothetical protein SORBIDRAFT_01g008465 [Sorghum bicolor]
gi|241920330|gb|EER93474.1| hypothetical protein SORBIDRAFT_01g008465 [Sorghum bicolor]
Length = 599
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+D T +AM+ GLA NG +ELF ++ PN VT + VL+A
Sbjct: 423 KDVTLWTAMISGLAFNGHGTEALELFWKMQTEAIAPNGVTLLAVLSA 469
>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Vitis vinifera]
Length = 704
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MMP ++ + +A++ G +G+ VE+F + G PN VTF+ VL+A
Sbjct: 393 MMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSA 443
>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
Length = 704
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MMP ++ + +A++ G +G+ VE+F + G PN VTF+ VL+A
Sbjct: 393 MMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSA 443
>gi|125570503|gb|EAZ12018.1| hypothetical protein OsJ_01900 [Oryza sativa Japonica Group]
Length = 657
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFG 59
MP RD + S ++ G ++G + M +++F S+ G PN +T L+A G
Sbjct: 368 MPERDTISWSTLISGYVQSGNSNMALQIFCSMLDAGVEPNEITLASALSAVANSGTLG 425
>gi|404352858|gb|AFR61426.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
gi|404352866|gb|AFR61430.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
Length = 202
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP--RPNAVTFVGVLTA 51
M RD + +AM+LG A +G+ ++ F + K G +PN+VTFV +L A
Sbjct: 86 MQKRDLASWNAMILGFATHGRAEEALDCFDCMVKEGKNVKPNSVTFVALLIA 137
>gi|317106766|dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
Length = 563
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D+ S+M++GLA +G + +F +E+ +PN VTF+G+L+A
Sbjct: 254 MRVKDSKAWSSMIVGLAIHGLAEDALNVFSRMEEAQAKPNHVTFIGILSA 303
>gi|449448934|ref|XP_004142220.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37320-like [Cucumis sativus]
gi|449502632|ref|XP_004161699.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37320-like [Cucumis sativus]
Length = 524
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ + +A++ G A + M +ELF +++ +PN TFV +LTA
Sbjct: 191 MPVRNVVSWTAIIAGFAVEWQVNMCLELFQEMKRMALQPNEFTFVTILTA 240
>gi|357431694|gb|AET78524.1| At1g59720-like protein [Arabidopsis halleri]
Length = 163
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP--RPNAVTFVGVLTA 51
M RD + +AM+LG A +G+ ++ F + K G +PN+VTFV +L A
Sbjct: 65 MQKRDLASWNAMILGFATHGRAEEALDCFDRMVKEGKNVKPNSVTFVALLIA 116
>gi|357507205|ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498906|gb|AES80109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1288
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD+ + ++++ GLA NG + LF + + G RP TFVGVL A
Sbjct: 1089 MGKRDSVSWTSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLA 1138
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD +A++ G A +G +++F +E++G +PN +TF+G+L A
Sbjct: 337 RDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHA 383
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P RDA + + ++ G A +G +E F +EK G P +TF VL+A
Sbjct: 306 LPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSA 355
>gi|404352374|gb|AFR61185.1| pentatricopeptide repeat protein, partial [Arabidopsis lyrata
subsp. petraea]
Length = 202
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP--RPNAVTFVGVLTA 51
M RD + +AM+LG A +G+ ++ F + K G +PN+VTFV +L A
Sbjct: 86 MQKRDLASWNAMILGFATHGRAEEALDCFDCMVKEGKNVKPNSVTFVALLIA 137
>gi|356559933|ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Glycine max]
Length = 512
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEK-RGPRPNAVTFVGVLTAYGKI 55
+MP R+ + + M+ G +++ K G + LF+ +E+ +G PNAVT + A+ +
Sbjct: 174 LMPSRNVVSWTTMISGYSRSKKYGEALGLFLRMEQEKGMMPNAVTLASIFPAFANL 229
>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
Length = 781
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D + + M++G A +G+ +E+F ++ G +PN TFV VLTA
Sbjct: 472 MVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTA 521
>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
Length = 781
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D + + M++G A +G+ +E+F ++ G +PN TFV VLTA
Sbjct: 472 MVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTA 521
>gi|414864687|tpg|DAA43244.1| TPA: hypothetical protein ZEAMMB73_488594 [Zea mays]
Length = 658
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP +D + + +++G A +G+ +E+F ++ G PN TFV VLTA
Sbjct: 487 MPGKDVISWNTIIIGYAIHGQGKTALEMFDEMKCNGIEPNESTFVSVLTA 536
>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 544
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP-RPNAVTFVGVLTA 51
R+ T +AM+ GLA NG + +++F +E G P+ VTFVGVL A
Sbjct: 238 RNTCTWNAMINGLAMNGYSAKALDMFRQMELNGTVAPDEVTFVGVLLA 285
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF-MSIEKRGPRPNAVTFVGVLTA 51
M ++ + S+M+LGLA +G+ ++LF + + +PN VTFVG LTA
Sbjct: 345 MNNKNVFSYSSMILGLATHGRAQEALDLFHYMVTQTAIKPNTVTFVGALTA 395
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
+P +D +AM+ G A+N K +E F +EK G R + VT G ++A ++
Sbjct: 242 LPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQL 295
>gi|255558198|ref|XP_002520126.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540618|gb|EEF42181.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 593
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
+ P+D +A++ G A+NG+N E+F + + PN TF GVLT G
Sbjct: 536 IKPKDPAIWNALISGYARNGENESVFEVFDQMLEEKVEPNLTTFTGVLTVCG 587
>gi|145335149|ref|NP_172066.3| protein pigment defective 247 [Arabidopsis thaliana]
gi|75191933|sp|Q9MA50.1|PPR13_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05750, chloroplastic; AltName: Full=Protein PIGMENT
DEFECTIVE 247; Flags: Precursor
gi|6850304|gb|AAF29381.1|AC009999_1 Contains similarity to a hypothetical protein from Arabidopsis
thaliana gb|AC007109.6, and contains two DUF17 PF|01535
domains [Arabidopsis thaliana]
gi|62320576|dbj|BAD95203.1| hypothetical protein [Arabidopsis thaliana]
gi|332189766|gb|AEE27887.1| protein pigment defective 247 [Arabidopsis thaliana]
Length = 500
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 40/80 (50%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M R + +++++G A NG + F ++++G +P+AVTF G LTA + +
Sbjct: 267 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG 326
Query: 62 LMGIQPQNLWYYIDGQIDAW 81
L Q Y I +I+ +
Sbjct: 327 LRYFQIMKCDYRISPRIEHY 346
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
D + +A+++G A +G V LF ++++G +PN V FV VLTA
Sbjct: 408 DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTA 453
>gi|383152423|gb|AFG58307.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
Length = 151
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M RD + +AM++G A +G ++LF ++ P+ VTF+GVL+A T
Sbjct: 68 MTTRDVVSWNAMIVGYAIHGCGKEALQLFEQMKHTDTGPDHVTFIGVLSA---------T 118
Query: 62 LMGIQPQNLWYYIDGQIDAWQ 82
+ W Y D ++ +
Sbjct: 119 CHAGLVDDGWQYFDSMVEDYH 139
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.137 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,457,913,822
Number of Sequences: 23463169
Number of extensions: 49742244
Number of successful extensions: 146785
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2094
Number of HSP's successfully gapped in prelim test: 300
Number of HSP's that attempted gapping in prelim test: 141251
Number of HSP's gapped (non-prelim): 5757
length of query: 87
length of database: 8,064,228,071
effective HSP length: 57
effective length of query: 30
effective length of database: 6,726,827,438
effective search space: 201804823140
effective search space used: 201804823140
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)