BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042815
(87 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SJG6|PP200_ARATH Pentatricopeptide repeat-containing protein At2g42920,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2
SV=1
Length = 559
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
P + + ++M+LGLA NG ++LF +E+ G P++V+F+GVLTA
Sbjct: 320 PKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTA 368
Score = 35.8 bits (81), Expect = 0.082, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP R+ + ++M+ G +NG+ +++F ++++ +P+ T V +L A
Sbjct: 218 MPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNA 267
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ + S M++G A NG + + LF +++ G RPN VTF+GVL+A
Sbjct: 271 MKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSA 320
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
M RD + +AM++G A+NG +ELF + + G +P+ +T +GVL+A G
Sbjct: 453 MMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACG 504
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 45.8 bits (107), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M RD T S M+ GLA+NG + ++LF ++ G +PN +T VGVL F +
Sbjct: 319 MKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVL--------FACS 370
Query: 62 LMGIQPQNLWYY 73
G+ ++ WYY
Sbjct: 371 HAGLL-EDGWYY 381
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 33/47 (70%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R++ T + M+LG ++G + LF+S+++ G +P+A+TFV VL+A
Sbjct: 585 RNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSA 631
Score = 33.5 bits (75), Expect = 0.40, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
RD T ++M+ G +NG +F + ++ RPNAVT +L A +I
Sbjct: 484 RDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQI 534
>sp|Q3ECB8|PP128_ARATH Pentatricopeptide repeat-containing protein At1g77170
OS=Arabidopsis thaliana GN=PCMP-E21 PE=2 SV=1
Length = 467
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M R+ + S+M++G A NG +E F + + G RPN +TFVGVL+A
Sbjct: 281 MRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSA 330
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
P R + +A++ GL G+ VE+F+ +++ G P+ T V V + G
Sbjct: 179 PERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCG 229
>sp|Q9C866|PPR65_ARATH Pentatricopeptide repeat-containing protein At1g31430
OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1
Length = 570
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 32/47 (68%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD + ++++ GLA NG +G ++L+ +E G R +A+TFV VLTA
Sbjct: 343 RDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTA 389
>sp|Q5XEY7|PP309_ARATH Pentatricopeptide repeat-containing protein At4g14170
OS=Arabidopsis thaliana GN=PCMP-E17 PE=2 SV=2
Length = 477
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + S+++LG +G M +LF + K G PNAVTF+GVL+A
Sbjct: 296 MSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSA 345
>sp|Q9LR69|PPR8_ARATH Pentatricopeptide repeat-containing protein At1g03540
OS=Arabidopsis thaliana GN=PCMP-E4 PE=2 SV=1
Length = 609
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
M R+ T +AM+ LA+NG+ V F + K+G +P+ ++F+ +LTA G
Sbjct: 423 MSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACG 474
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD T +AM++GLA NG+ +++F ++ +P+ +T++GVL+A
Sbjct: 429 MDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSA 478
Score = 32.3 bits (72), Expect = 0.93, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + + M+ G + G +E+F ++ G P+ T V VLTA
Sbjct: 328 MPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTA 377
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 32/44 (72%)
Query: 8 TTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
T +AM++GLA++G+ ++LF ++ G +P+ VTF+GVL+A
Sbjct: 685 TAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSA 728
Score = 33.5 bits (75), Expect = 0.45, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + ++++ G+A+NG V LFM + + G +P+ T VL A
Sbjct: 376 MSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA 425
>sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein At5g55740,
chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1
Length = 830
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P R+A +A+M+G +NGKN + LF + K+G P VT L+A
Sbjct: 234 IPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSA 283
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + S +++G A++G + LF ++ G PN VTFVGVLTA
Sbjct: 534 MDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTA 583
>sp|P0C7R0|PPR69_ARATH Pentatricopeptide repeat-containing protein At1g32415,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E56 PE=2
SV=1
Length = 761
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M +D + ++M++GL+ +G + LF + G +PN+VTF+GVL+A
Sbjct: 529 MVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSA 578
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + S M++G+A NG F +++ G PN V+ GVL+A
Sbjct: 229 MPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSA 278
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
D + +AM+ G A++GK+ ++LF K G RP++VTF+ VLTA
Sbjct: 476 DIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTA 521
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 3 PPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
P +D + +AM+ GL+ NG+ +ELF + G P+ VTFV +++A
Sbjct: 485 PNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISA 533
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
R++ T SAM+ G ++NG++ V+LF + G +P+ T VGVL A I
Sbjct: 285 RNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDI 335
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MM R TT +AM+ G +G +ELF ++K +PN VTF+ V++A
Sbjct: 498 MMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISA 548
Score = 37.7 bits (86), Expect = 0.022, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGV 60
MP RD + + ++ G ++NG M +E+ S+ + +P+ +T V VL A +++ V
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV 254
Score = 37.4 bits (85), Expect = 0.026, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKI 57
R + +AM+LG A+NG+ + F + R +P+ T+V V+TA ++ I
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSI 453
>sp|Q9LRV2|PP256_ARATH Pentatricopeptide repeat-containing protein At3g26540
OS=Arabidopsis thaliana GN=PCMP-A5 PE=2 SV=1
Length = 700
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD ++++ G +NG++ ELFM +E G +P+ VTF+G+L A
Sbjct: 560 RDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQA 606
Score = 34.7 bits (78), Expect = 0.20, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP RD + +A++ A+NG + +F + + G R +F GVL + G I
Sbjct: 122 MPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLI 175
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD SAM++G +G+ + L+ ++E+ G PN VTF+G+L A
Sbjct: 387 RDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMA 433
Score = 32.7 bits (73), Expect = 0.71, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 28/51 (54%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAY 52
+P R + +A++ A+NG+ +E+F + K +P+ V V VL A+
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAF 232
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P +D + + M+ GL +G +ELF + + G RP+ VTF+ VL +
Sbjct: 376 IPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCS 425
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
RD + ++M++ LA++G +ELF ++ G RP+ +T+VGV +A
Sbjct: 478 RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSA 524
Score = 34.7 bits (78), Expect = 0.20, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGV 48
RD +AM++G ++G G + LF S+ G RPN+ T +
Sbjct: 376 RDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAM 419
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF--MSIEKRGPRPNAVTFVGVLTA 51
M RD + +AM+LG A +G+ + F M ++ RPN+VTFVG+L A
Sbjct: 315 MQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIA 366
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 9 TSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGK 54
T S++M GL K+G++ +ELF + RG RPN VT+ ++T K
Sbjct: 264 TYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCK 309
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 11/77 (14%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRG--PRPNAVTFVGVLTAYGK----- 54
MP ++ T ++++ G A G+ M + LF + RG P PN +TFV +L+A +
Sbjct: 371 MPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVE 430
Query: 55 --IKIFGV--TLMGIQP 67
+KIF + GI+P
Sbjct: 431 NGMKIFDSMRSTYGIEP 447
Score = 32.3 bits (72), Expect = 0.84, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKI 57
+ P R+ + ++++ GLA+NG + F + + G PN TF A +++
Sbjct: 67 LTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRL 123
>sp|P0C8Q5|PP336_ARATH Pentatricopeptide repeat-containing protein At4g22760
OS=Arabidopsis thaliana GN=PCMP-E6 PE=2 SV=1
Length = 578
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMS-IEKRGPRPNAVTFVGVLTAY 52
+D + SAM++G NG LF + IEK+ P PN VTF G+L+AY
Sbjct: 395 KDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIP-PNVVTFTGLLSAY 442
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 39.3 bits (90), Expect = 0.006, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVL 49
D T S+++ GL++ GK ++ F E+ G RPNAVTF ++
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Score = 33.1 bits (74), Expect = 0.53, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 9 TSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTF---VGVLTAYGK----IKIFG-V 60
T + ++ GLAK GK G ++L + + +P+ +T+ VG L+ GK IK F
Sbjct: 451 TYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF 510
Query: 61 TLMGIQP 67
MGI+P
Sbjct: 511 ERMGIRP 517
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYG 53
MP R+ + S+M+ L+ +G+ + LF +++ PN VTFVGVL YG
Sbjct: 405 MPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVL--YG 454
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P RD + +A++ G A+ G + +E+F + G PN VT+ +LTA
Sbjct: 214 LPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTA 263
Score = 38.1 bits (87), Expect = 0.017, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF--MSIEKRGPRPNAVTFVGVLT--AYGKIKI 57
MP R A + +AM++G +K+G +ELF M EKR +P+AVT + VL+ ++G+++
Sbjct: 315 MPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKR-VKPDAVTLLAVLSGCSHGRMED 373
Query: 58 FGVTL 62
G+ +
Sbjct: 374 TGLNI 378
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 27/50 (54%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP ++ + +AM+ ++ G + + +F + + +PN TF VLT+
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTS 162
>sp|Q9MA50|PPR13_ARATH Pentatricopeptide repeat-containing protein At1g05750,
chloroplastic OS=Arabidopsis thaliana GN=PDE247 PE=2
SV=1
Length = 500
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 40/80 (50%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
M R + +++++G A NG + F ++++G +P+AVTF G LTA + +
Sbjct: 267 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG 326
Query: 62 LMGIQPQNLWYYIDGQIDAW 81
L Q Y I +I+ +
Sbjct: 327 LRYFQIMKCDYRISPRIEHY 346
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP RD + +AM+ G K G + F ++ G +P+ V + L A
Sbjct: 166 MPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNA 215
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
D + +A+++G A +G V LF ++++G +PN V FV VLTA
Sbjct: 408 DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTA 453
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
+P +D +AM+ G A+N K +E F +EK G R + VT G ++A ++
Sbjct: 241 LPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQL 294
Score = 36.6 bits (83), Expect = 0.046, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF-MSIEKRGPRPNAVTFVGVLTA 51
M ++ T S+M+LGLA +G+ + LF + + +PN VTFVG L A
Sbjct: 344 MNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMA 394
>sp|Q9FXA9|PPR83_ARATH Putative pentatricopeptide repeat-containing protein At1g56570
OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1
Length = 611
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKI--FG 59
MP RD +AM+ G A + N E F + K+G PN T VL + +K+ +G
Sbjct: 71 MPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYG 130
Query: 60 VTLMGI 65
+ G+
Sbjct: 131 ALVHGV 136
Score = 36.2 bits (82), Expect = 0.056, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R+ + ++MM+G +G VELF + G RP+ + F+ VL+A
Sbjct: 378 RNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSA 424
>sp|Q9FNN7|PP371_ARATH Pentatricopeptide repeat-containing protein At5g08510
OS=Arabidopsis thaliana GN=PCMP-E20 PE=2 SV=1
Length = 511
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R+ + ++M+ LA +GK+ + LF + + G +P+AVTFVG+L A
Sbjct: 280 RNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLA 326
Score = 37.0 bits (84), Expect = 0.038, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEK-RGPRPNAVTFVGVLTA---YGKIKI 57
MP ++ T+ + ++ G ++NG +++F+ +EK + +PN +T V VL A G+++I
Sbjct: 174 MPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEI 233
Query: 58 FGVTLMGIQPQNLWY 72
G L G +N ++
Sbjct: 234 -GRRLEGYARENGFF 247
>sp|Q9FMA1|PP433_ARATH Pentatricopeptide repeat-containing protein At5g56310
OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1
Length = 530
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
R+ T + ++ GLA +G + +F + K G RPN VTF+ +L+A
Sbjct: 314 RNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSA 360
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 1 MMP--PRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MMP R+ + + ++ G AK+G+ +E+F + P+ VT + VL+A
Sbjct: 207 MMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSA 259
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
MP +D ++++ G A+NGK + L+ + +G +P+ T V +L+A KI
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKI 235
Score = 34.3 bits (77), Expect = 0.21, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEK-RGPRPNAVTFVGVLTA 51
M +++ + +++++GLA NG +ELF +E G P +TFVG+L A
Sbjct: 283 MVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333
>sp|Q9FG85|PP415_ARATH Pentatricopeptide repeat-containing protein At5g43790
OS=Arabidopsis thaliana GN=PCMP-E30 PE=2 SV=1
Length = 460
Score = 38.5 bits (88), Expect = 0.011, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + +AM+ GLA +G G+EL+ S+ +G P++ TFV ++A
Sbjct: 277 MSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISA 326
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P + T SAM+ G A +G+ G ++ F + + G RP+ V ++ +LTA
Sbjct: 335 LPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTA 384
Score = 33.9 bits (76), Expect = 0.32, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
M R + + M+ G + NG VE+F ++K RPN VT V VL A ++
Sbjct: 234 MRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRL 287
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVL 49
M ++ T S+ + GLA NG +ELF +++ G PNAVTFV VL
Sbjct: 301 MEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVL 348
>sp|Q9LXY5|PP284_ARATH Pentatricopeptide repeat-containing protein At3g56550
OS=Arabidopsis thaliana GN=PCMP-H80 PE=2 SV=1
Length = 581
Score = 38.5 bits (88), Expect = 0.014, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVL 49
M RD T ++M++G +G + F + G RPNA+TF+G+L
Sbjct: 269 MRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLL 316
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 38.5 bits (88), Expect = 0.014, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELF--MSIEKRGPRPNAVTFVGVLTA 51
MP R++ + ++M+ G A++G+ ++LF M ++ + P P+ VTFVGVL+A
Sbjct: 680 MPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTP-PDHVTFVGVLSA 730
Score = 34.3 bits (77), Expect = 0.25, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGVT 61
MP R+ + + ++ G ++NG++ + + K G N FV VL A +I G+
Sbjct: 62 MPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGI- 120
Query: 62 LMGIQPQNLWYYIDGQIDA 80
L G Q L + + +DA
Sbjct: 121 LFGRQIHGLMFKLSYAVDA 139
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 38.5 bits (88), Expect = 0.014, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 6 DATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
D T SAM+ LA++G + +F S++ G +PN F+GVL A
Sbjct: 524 DVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIA 569
Score = 32.7 bits (73), Expect = 0.70, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 1 MMPPRDATTSSAMMLGLAK-----NGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+MP ++ T +AM+ G + + + +LFM +++RG P+ TF VL A
Sbjct: 312 LMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKA 367
>sp|Q9SX45|PPR75_ARATH Pentatricopeptide repeat-containing protein At1g50270
OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1
Length = 596
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIK--IFGVTL 62
+D T +AM+ G +NG + F+ ++K G N +T V VL A GK++ FG ++
Sbjct: 167 KDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSV 226
Query: 63 MGI 65
G+
Sbjct: 227 HGL 229
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 32/50 (64%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + +++++G+A++G+ + L+ + G +PN VTFVG++ A
Sbjct: 299 MRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYA 348
>sp|O65543|PP343_ARATH Pentatricopeptide repeat-containing protein At4g31070,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E7 PE=2
SV=2
Length = 624
Score = 38.1 bits (87), Expect = 0.017, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M ++ + +AM+ G N MGV+LF ++++ RPN VT + VL A
Sbjct: 222 MEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPA 271
>sp|O64705|PP184_ARATH Pentatricopeptide repeat-containing protein At2g34400
OS=Arabidopsis thaliana GN=PCMP-E23 PE=3 SV=2
Length = 621
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKI 55
M +D +AM+ ++NGK+ +LF +EK G P+A T VL+A G +
Sbjct: 294 MIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSV 347
>sp|Q9M9R6|PPR43_ARATH Pentatricopeptide repeat-containing protein At1g14470
OS=Arabidopsis thaliana GN=PCMP-A4 PE=2 SV=2
Length = 540
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRG-PRPNAVTFVGVLTAYGKI 55
MP R+ + ++++ G A NG+ + +E F + G +P+ VT + VL+A G +
Sbjct: 357 MPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHM 411
Score = 37.0 bits (84), Expect = 0.032, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
MP + + +AM+ G A+NG + LF + + G RPN T+V V++A
Sbjct: 224 MPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISA 273
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 23/50 (46%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
M RD + + + A NG + L ++ G P+ VT+ VLTA
Sbjct: 459 MKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTA 508
>sp|Q9ZQA1|PP188_ARATH Pentatricopeptide repeat-containing protein At2g36730
OS=Arabidopsis thaliana GN=PCMP-E44 PE=3 SV=1
Length = 501
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGP-RPNAVTFVGVLTA 51
M ++ T SAM++GLA+ G ++LF + K RPN VTF+GVL A
Sbjct: 273 MVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCA 323
>sp|Q9LJ69|PP243_ARATH Pentatricopeptide repeat-containing protein At3g18970
OS=Arabidopsis thaliana GN=PCMP-E93 PE=2 SV=1
Length = 472
Score = 37.7 bits (86), Expect = 0.021, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 1 MMPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTAYGKIKIFGV 60
+M ++ T ++M GLA NG+ L + + G +PN +TF +L+AY I G+
Sbjct: 282 LMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHI---GL 338
Query: 61 TLMGIQ 66
GI+
Sbjct: 339 VEEGIE 344
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 37.7 bits (86), Expect = 0.024, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 5 RDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+ ++ +AM+ G A +G+ +LF + K G +P+ +TFVG+L+A
Sbjct: 433 KSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSA 479
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 2 MPPRDATTSSAMMLGLAKNGKNGMGVELFMSIEKRGPRPNAVTFVGVLTA 51
+P +D + +AM+ G A+ G +ELF + K RP+ T V V++A
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,925,573
Number of Sequences: 539616
Number of extensions: 1155524
Number of successful extensions: 4262
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 3673
Number of HSP's gapped (non-prelim): 618
length of query: 87
length of database: 191,569,459
effective HSP length: 57
effective length of query: 30
effective length of database: 160,811,347
effective search space: 4824340410
effective search space used: 4824340410
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)