Query 042816
Match_columns 163
No_of_seqs 117 out of 1355
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 17:06:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042816.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042816hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3piu_A 1-aminocyclopropane-1-c 99.9 3.4E-23 1.2E-27 159.9 17.8 161 1-161 274-434 (435)
2 1iay_A ACC synthase 2, 1-amino 99.9 6.1E-23 2.1E-27 158.2 18.4 159 1-159 269-427 (428)
3 3aow_A Putative uncharacterize 99.9 7.8E-23 2.7E-27 158.9 15.6 150 1-160 290-446 (448)
4 2hox_A ALLIIN lyase 1; cystein 99.9 2.2E-23 7.5E-28 161.1 8.4 148 1-158 252-424 (427)
5 2o1b_A Aminotransferase, class 99.9 2.3E-22 8E-27 154.1 12.7 148 1-159 254-403 (404)
6 3ei9_A LL-diaminopimelate amin 99.9 1.6E-22 5.5E-27 156.0 11.6 150 2-162 272-431 (432)
7 1b5p_A Protein (aspartate amin 99.9 3.2E-22 1.1E-26 152.3 12.6 147 1-157 235-383 (385)
8 2x5d_A Probable aminotransfera 99.9 6.3E-22 2.2E-26 151.8 14.3 153 1-161 246-400 (412)
9 2r2n_A Kynurenine/alpha-aminoa 99.9 4.4E-22 1.5E-26 153.4 13.4 149 1-159 264-424 (425)
10 1gd9_A Aspartate aminotransfer 99.9 9.3E-22 3.2E-26 149.6 15.0 151 1-160 234-387 (389)
11 3qgu_A LL-diaminopimelate amin 99.9 5E-22 1.7E-26 153.9 10.5 147 1-158 283-439 (449)
12 3nra_A Aspartate aminotransfer 99.9 1.9E-21 6.5E-26 148.5 13.3 150 1-160 254-406 (407)
13 3b46_A Aminotransferase BNA3; 99.9 1.5E-21 5.2E-26 151.4 12.9 151 2-154 276-442 (447)
14 3ihj_A Alanine aminotransferas 99.9 5.2E-21 1.8E-25 150.5 15.8 159 2-161 318-495 (498)
15 3g7q_A Valine-pyruvate aminotr 99.9 3.6E-21 1.2E-25 147.4 14.5 150 2-161 251-415 (417)
16 2z61_A Probable aspartate amin 99.9 1.9E-21 6.7E-26 147.0 12.8 144 1-157 223-369 (370)
17 1c7n_A Cystalysin; transferase 99.9 1.7E-21 5.9E-26 148.6 12.4 151 2-162 240-396 (399)
18 3bwn_A AT1G70560, L-tryptophan 99.9 3.4E-22 1.2E-26 152.7 8.0 146 2-159 219-387 (391)
19 3ppl_A Aspartate aminotransfer 99.9 1.3E-20 4.5E-25 145.1 16.8 149 3-160 262-421 (427)
20 3d6k_A Putative aminotransfera 99.9 1E-20 3.5E-25 145.7 16.0 148 3-160 260-419 (422)
21 2zyj_A Alpha-aminodipate amino 99.9 1.4E-20 4.7E-25 143.6 16.5 149 1-160 239-394 (397)
22 1d2f_A MALY protein; aminotran 99.9 4.2E-21 1.4E-25 146.1 13.5 148 2-159 235-389 (390)
23 3tcm_A Alanine aminotransferas 99.9 5.2E-21 1.8E-25 150.5 14.3 157 2-160 319-495 (500)
24 2dou_A Probable N-succinyldiam 99.9 4E-21 1.4E-25 145.6 12.9 142 2-156 232-375 (376)
25 3kax_A Aminotransferase, class 99.9 9E-21 3.1E-25 143.6 14.8 146 2-156 232-382 (383)
26 1yiz_A Kynurenine aminotransfe 99.9 1.4E-21 4.7E-26 150.5 10.1 153 2-157 257-427 (429)
27 1vp4_A Aminotransferase, putat 99.9 3.1E-21 1.1E-25 148.6 11.9 151 1-161 261-420 (425)
28 3jtx_A Aminotransferase; NP_28 99.9 7.6E-21 2.6E-25 144.8 13.7 142 1-156 246-395 (396)
29 3h14_A Aminotransferase, class 99.9 1.1E-20 3.9E-25 143.7 14.4 149 1-160 231-383 (391)
30 2o0r_A RV0858C (N-succinyldiam 99.9 3E-21 1E-25 148.0 11.0 151 2-161 235-398 (411)
31 3fdb_A Beta C-S lyase, putativ 99.9 2.1E-21 7.1E-26 146.9 10.0 149 1-159 224-376 (377)
32 3fvs_A Kynurenine--oxoglutarat 99.9 3.4E-21 1.2E-25 147.9 10.9 154 2-158 249-421 (422)
33 3dzz_A Putative pyridoxal 5'-p 99.9 7.4E-21 2.5E-25 144.4 12.5 150 2-160 236-390 (391)
34 3dyd_A Tyrosine aminotransfera 99.9 6.8E-21 2.3E-25 146.9 12.4 155 1-161 264-426 (427)
35 3rq1_A Aminotransferase class 99.9 3.2E-20 1.1E-24 142.5 16.1 144 1-161 263-417 (418)
36 1u08_A Hypothetical aminotrans 99.8 6.3E-21 2.1E-25 145.0 11.6 144 2-154 238-385 (386)
37 2x5f_A Aspartate_tyrosine_phen 99.8 2.4E-20 8.2E-25 143.7 15.0 144 2-159 273-429 (430)
38 1j32_A Aspartate aminotransfer 99.8 1.4E-20 4.9E-25 143.0 13.6 147 1-159 238-387 (388)
39 3asa_A LL-diaminopimelate amin 99.8 7E-22 2.4E-26 151.1 6.2 149 1-162 237-396 (400)
40 4dq6_A Putative pyridoxal phos 99.8 1.4E-20 4.7E-25 142.9 12.8 145 2-156 240-390 (391)
41 3op7_A Aminotransferase class 99.8 1.4E-20 4.8E-25 142.4 12.3 148 1-161 223-373 (375)
42 2zc0_A Alanine glyoxylate tran 99.8 4.2E-20 1.4E-24 141.2 14.9 150 1-159 248-404 (407)
43 2zy4_A L-aspartate beta-decarb 99.8 1.9E-20 6.4E-25 148.8 13.3 154 1-160 316-523 (546)
44 2gb3_A Aspartate aminotransfer 99.8 5E-20 1.7E-24 141.2 15.1 149 1-161 245-404 (409)
45 3ez1_A Aminotransferase MOCR f 99.8 6.9E-20 2.4E-24 140.8 15.4 148 3-160 255-416 (423)
46 3ezs_A Aminotransferase ASPB; 99.8 3.8E-20 1.3E-24 140.0 13.5 140 1-159 232-375 (376)
47 1xi9_A Putative transaminase; 99.8 1.5E-20 5.1E-25 143.9 11.3 151 1-160 246-404 (406)
48 3k7y_A Aspartate aminotransfer 99.8 1.6E-20 5.4E-25 144.3 11.2 135 1-158 250-404 (405)
49 3e2y_A Kynurenine-oxoglutarate 99.8 1.9E-20 6.6E-25 143.1 10.8 150 2-154 242-408 (410)
50 3l8a_A METC, putative aminotra 99.8 2.7E-20 9.2E-25 143.2 10.6 147 2-157 270-420 (421)
51 1o4s_A Aspartate aminotransfer 99.8 1.3E-19 4.5E-24 138.0 13.9 139 1-157 247-387 (389)
52 3f6t_A Aspartate aminotransfer 99.8 2.7E-20 9.3E-25 147.5 10.4 157 2-161 315-527 (533)
53 3get_A Histidinol-phosphate am 99.8 4.4E-19 1.5E-23 133.8 16.1 137 1-156 228-364 (365)
54 1fg7_A Histidinol phosphate am 99.8 3.1E-19 1.1E-23 134.6 15.2 137 1-154 215-353 (356)
55 1bw0_A TAT, protein (tyrosine 99.8 1.2E-19 4.2E-24 139.0 13.1 154 2-161 255-415 (416)
56 3b1d_A Betac-S lyase; HET: PLP 99.7 5.5E-22 1.9E-26 151.2 0.0 148 1-157 239-391 (392)
57 3t18_A Aminotransferase class 99.8 2.4E-19 8.3E-24 137.4 14.5 139 2-161 263-412 (413)
58 3if2_A Aminotransferase; YP_26 99.8 2.5E-19 8.6E-24 138.5 14.4 150 2-161 277-442 (444)
59 3ele_A Amino transferase; RER0 99.8 1E-19 3.5E-24 138.6 11.8 140 1-160 249-397 (398)
60 3g0t_A Putative aminotransfera 99.8 1.5E-19 5.2E-24 139.2 12.1 149 1-158 261-436 (437)
61 1v2d_A Glutamine aminotransfer 99.8 1.2E-19 4E-24 137.7 10.9 146 2-161 224-373 (381)
62 3hdo_A Histidinol-phosphate am 99.8 1.6E-18 5.3E-23 130.7 16.1 144 1-162 215-358 (360)
63 3ffh_A Histidinol-phosphate am 99.8 1.9E-18 6.4E-23 130.2 16.0 136 1-155 226-362 (363)
64 3ly1_A Putative histidinol-pho 99.8 3.3E-18 1.1E-22 128.4 17.0 138 1-158 214-351 (354)
65 1lc5_A COBD, L-threonine-O-3-p 99.8 7.6E-19 2.6E-23 132.6 13.6 143 1-160 217-361 (364)
66 3ftb_A Histidinol-phosphate am 99.8 2.7E-18 9.3E-23 129.1 15.9 141 1-157 216-359 (361)
67 3fkd_A L-threonine-O-3-phospha 99.8 3E-19 1E-23 134.1 10.0 142 2-158 199-341 (350)
68 3p1t_A Putative histidinol-pho 99.8 5.7E-18 1.9E-22 126.2 15.1 136 1-156 199-334 (337)
69 1uu1_A Histidinol-phosphate am 99.8 2.9E-18 9.9E-23 128.1 13.5 132 1-155 203-334 (335)
70 3euc_A Histidinol-phosphate am 99.8 6.9E-18 2.4E-22 127.3 14.2 137 3-157 229-366 (367)
71 4eu1_A Mitochondrial aspartate 99.8 6.4E-18 2.2E-22 129.4 12.1 135 1-156 259-408 (409)
72 3cq5_A Histidinol-phosphate am 99.8 3.1E-17 1.1E-21 124.0 14.5 135 1-157 232-366 (369)
73 3meb_A Aspartate aminotransfer 99.7 1.6E-17 5.6E-22 128.9 12.8 140 1-160 278-445 (448)
74 4h51_A Aspartate aminotransfer 99.7 1.2E-17 4E-22 128.8 11.6 139 1-161 266-419 (420)
75 7aat_A Aspartate aminotransfer 99.7 5E-17 1.7E-21 124.0 13.0 135 1-156 251-400 (401)
76 4f4e_A Aromatic-amino-acid ami 99.7 9.3E-17 3.2E-21 123.4 13.8 135 1-156 270-419 (420)
77 1ajs_A Aspartate aminotransfer 99.7 1.1E-16 3.9E-21 122.4 13.2 138 1-159 259-411 (412)
78 3fsl_A Aromatic-amino-acid ami 99.7 1.5E-16 5.3E-21 121.0 13.6 134 1-155 248-396 (397)
79 1yaa_A Aspartate aminotransfer 99.7 8.2E-17 2.8E-21 123.3 11.8 138 1-159 255-411 (412)
80 2q7w_A Aspartate aminotransfer 99.7 8.9E-17 3E-21 122.3 11.5 133 1-155 247-395 (396)
81 2ay1_A Aroat, aromatic amino a 99.7 6.3E-16 2.2E-20 117.5 12.6 134 1-155 244-392 (394)
82 3a2b_A Serine palmitoyltransfe 99.7 2.1E-15 7.1E-20 114.9 13.9 144 1-160 244-393 (398)
83 3tqx_A 2-amino-3-ketobutyrate 99.6 1.5E-14 5.2E-19 109.8 14.4 143 6-160 249-397 (399)
84 1fc4_A 2-amino-3-ketobutyrate 99.6 1.6E-14 5.5E-19 110.0 14.0 144 3-162 251-400 (401)
85 1vjo_A Alanine--glyoxylate ami 99.6 1.4E-14 4.9E-19 109.9 13.6 143 2-156 223-392 (393)
86 2dr1_A PH1308 protein, 386AA l 99.6 4.9E-14 1.7E-18 106.5 15.4 146 2-161 210-381 (386)
87 2fyf_A PSAT, phosphoserine ami 99.6 1E-13 3.6E-18 105.7 15.3 143 2-158 224-397 (398)
88 2dkj_A Serine hydroxymethyltra 99.6 1E-13 3.5E-18 105.6 14.8 147 3-158 227-387 (407)
89 3kgw_A Alanine-glyoxylate amin 99.6 1.4E-13 4.9E-18 104.1 15.1 145 7-162 216-391 (393)
90 3i4j_A Aminotransferase, class 99.6 3.1E-14 1.1E-18 109.6 11.5 153 2-159 263-428 (430)
91 2bwn_A 5-aminolevulinate synth 99.6 7.2E-14 2.5E-18 106.5 13.2 146 1-159 249-400 (401)
92 2huf_A Alanine glyoxylate amin 99.5 3E-13 1E-17 102.6 15.7 147 2-161 209-385 (393)
93 2yrr_A Aminotransferase, class 99.5 8.5E-14 2.9E-18 103.8 12.3 140 3-157 190-351 (353)
94 1sff_A 4-aminobutyrate aminotr 99.5 1.4E-14 4.8E-19 111.1 8.1 146 2-160 270-425 (426)
95 1bs0_A Protein (8-amino-7-oxon 99.5 7.5E-14 2.6E-18 105.7 10.7 139 2-155 238-383 (384)
96 2z9v_A Aspartate aminotransfer 99.5 6.6E-13 2.3E-17 100.6 15.5 144 3-160 200-372 (392)
97 3nnk_A Ureidoglycine-glyoxylat 99.5 9.4E-13 3.2E-17 100.3 16.1 143 6-160 205-391 (411)
98 1iug_A Putative aspartate amin 99.5 2.7E-13 9.4E-18 101.2 12.1 140 8-160 192-349 (352)
99 2ch1_A 3-hydroxykynurenine tra 99.5 1.2E-12 4.2E-17 99.3 14.8 143 7-160 211-384 (396)
100 1m32_A 2-aminoethylphosphonate 99.5 5E-13 1.7E-17 100.1 12.3 139 7-159 199-365 (366)
101 2w8t_A SPT, serine palmitoyltr 99.5 1.4E-13 4.7E-18 106.1 9.2 146 2-162 266-418 (427)
102 2vi8_A Serine hydroxymethyltra 99.5 1.2E-12 4.2E-17 99.6 14.2 145 4-160 231-388 (405)
103 1eg5_A Aminotransferase; PLP-d 99.5 1.2E-13 4E-18 104.2 8.1 147 2-162 205-379 (384)
104 3isl_A Purine catabolism prote 99.5 3.7E-12 1.3E-16 97.1 16.0 143 6-160 203-391 (416)
105 1zod_A DGD, 2,2-dialkylglycine 99.5 5E-13 1.7E-17 102.9 11.1 147 2-159 274-432 (433)
106 2aeu_A Hypothetical protein MJ 99.5 9.4E-13 3.2E-17 99.9 12.4 153 4-161 210-373 (374)
107 4ffc_A 4-aminobutyrate aminotr 99.4 2.1E-13 7.1E-18 106.0 8.3 152 2-162 296-452 (453)
108 2c0r_A PSAT, phosphoserine ami 99.4 4.8E-13 1.7E-17 100.6 10.1 142 2-159 199-361 (362)
109 3zrp_A Serine-pyruvate aminotr 99.4 8.8E-12 3E-16 93.9 16.3 140 7-160 195-364 (384)
110 2eh6_A Acoat, acetylornithine 99.4 1.8E-13 6.1E-18 103.3 6.7 129 2-155 243-374 (375)
111 3n5m_A Adenosylmethionine-8-am 99.4 4.5E-13 1.6E-17 103.8 7.9 152 2-158 286-451 (452)
112 3nx3_A Acoat, acetylornithine 99.4 1.2E-12 4.2E-17 99.5 9.9 140 2-158 250-394 (395)
113 1kmj_A Selenocysteine lyase; p 99.4 3.4E-12 1.2E-16 96.9 12.4 144 2-159 228-405 (406)
114 3dxv_A Alpha-amino-epsilon-cap 99.4 4.3E-13 1.5E-17 103.5 7.3 150 2-161 272-427 (439)
115 1e5e_A MGL, methionine gamma-l 99.4 4.2E-12 1.4E-16 97.3 12.6 136 1-158 210-394 (404)
116 1w23_A Phosphoserine aminotran 99.4 4.2E-12 1.4E-16 95.2 11.8 141 2-158 198-359 (360)
117 3gju_A Putative aminotransfera 99.4 2.6E-12 8.8E-17 99.9 10.8 146 7-161 297-458 (460)
118 3oks_A 4-aminobutyrate transam 99.4 7.3E-13 2.5E-17 102.8 7.7 148 2-158 298-450 (451)
119 2eo5_A 419AA long hypothetical 99.4 5.2E-13 1.8E-17 102.6 6.5 133 2-159 283-418 (419)
120 3l44_A Glutamate-1-semialdehyd 99.4 1.1E-12 3.9E-17 101.0 8.1 150 2-162 272-433 (434)
121 2ord_A Acoat, acetylornithine 99.4 1.4E-13 4.7E-18 104.8 3.0 135 2-158 254-396 (397)
122 1s0a_A Adenosylmethionine-8-am 99.4 2.2E-12 7.6E-17 99.2 9.6 136 5-161 278-426 (429)
123 1vef_A Acetylornithine/acetyl- 99.4 8.1E-13 2.8E-17 100.4 7.1 134 2-156 256-394 (395)
124 4adb_A Succinylornithine trans 99.4 2.5E-12 8.7E-17 97.9 9.3 142 2-161 254-402 (406)
125 1elu_A L-cysteine/L-cystine C- 99.4 8.8E-13 3E-17 99.7 6.5 137 3-154 222-387 (390)
126 1t3i_A Probable cysteine desul 99.4 8.6E-12 2.9E-16 95.1 12.0 146 2-161 233-415 (420)
127 2bkw_A Alanine-glyoxylate amin 99.4 1.9E-11 6.6E-16 92.2 13.6 140 3-159 205-384 (385)
128 3lws_A Aromatic amino acid bet 99.3 1.4E-11 4.9E-16 92.3 12.4 133 10-156 214-356 (357)
129 4eb5_A Probable cysteine desul 99.3 3.9E-12 1.3E-16 95.9 9.1 146 2-161 201-375 (382)
130 2pb2_A Acetylornithine/succiny 99.3 2.6E-12 8.8E-17 98.8 8.1 139 2-159 272-418 (420)
131 3ruy_A Ornithine aminotransfer 99.3 1.3E-12 4.5E-17 99.2 6.4 128 7-156 258-391 (392)
132 3kki_A CAI-1 autoinducer synth 99.3 1E-11 3.6E-16 94.9 11.3 141 2-159 258-404 (409)
133 3ffr_A Phosphoserine aminotran 99.3 2.5E-11 8.4E-16 90.8 12.9 139 2-156 193-361 (362)
134 3pj0_A LMO0305 protein; struct 99.3 2.9E-11 9.9E-16 90.6 12.9 139 2-155 210-358 (359)
135 3ecd_A Serine hydroxymethyltra 99.3 3.3E-11 1.1E-15 92.1 13.4 148 4-159 237-397 (425)
136 3f9t_A TDC, L-tyrosine decarbo 99.3 1.3E-11 4.4E-16 93.3 10.7 136 2-157 247-396 (397)
137 3k28_A Glutamate-1-semialdehyd 99.3 4.1E-12 1.4E-16 97.9 8.0 142 2-160 270-428 (429)
138 4a6r_A Omega transaminase; tra 99.3 9.7E-12 3.3E-16 96.6 10.1 146 4-160 292-450 (459)
139 3dod_A Adenosylmethionine-8-am 99.3 5.1E-12 1.8E-16 97.9 8.4 145 5-161 284-445 (448)
140 3fq8_A Glutamate-1-semialdehyd 99.3 5.5E-12 1.9E-16 97.0 8.3 146 2-158 269-426 (427)
141 4e77_A Glutamate-1-semialdehyd 99.3 4.5E-12 1.5E-16 97.6 7.5 146 2-158 270-428 (429)
142 4hvk_A Probable cysteine desul 99.3 9.8E-12 3.3E-16 93.5 9.1 121 31-162 234-376 (382)
143 1v72_A Aldolase; PLP-dependent 99.3 2.7E-11 9.1E-16 90.5 11.3 134 6-161 214-355 (356)
144 3f0h_A Aminotransferase; RER07 99.3 6.3E-11 2.2E-15 89.2 12.5 141 4-158 211-373 (376)
145 2epj_A Glutamate-1-semialdehyd 99.3 7.8E-12 2.7E-16 96.4 7.4 144 2-160 273-432 (434)
146 2e7u_A Glutamate-1-semialdehyd 99.3 6.3E-12 2.1E-16 96.6 6.2 139 2-155 268-423 (424)
147 1z7d_A Ornithine aminotransfer 99.3 2.1E-11 7E-16 94.2 8.8 141 2-161 283-431 (433)
148 2oat_A Ornithine aminotransfer 99.2 2.7E-11 9.1E-16 93.8 9.2 137 5-158 296-438 (439)
149 3n0l_A Serine hydroxymethyltra 99.2 6.9E-10 2.4E-14 84.6 15.2 148 3-158 228-388 (417)
150 2e7j_A SEP-tRNA:Cys-tRNA synth 99.2 2.9E-12 9.9E-17 96.3 1.9 139 2-159 211-370 (371)
151 1wyu_B Glycine dehydrogenase s 99.2 3.9E-11 1.3E-15 93.7 7.7 142 6-158 276-440 (474)
152 3h7f_A Serine hydroxymethyltra 99.2 1.8E-10 6.2E-15 89.2 11.2 147 4-159 250-414 (447)
153 2cy8_A D-phgat, D-phenylglycin 99.2 6.8E-11 2.3E-15 91.6 8.8 142 2-161 271-437 (453)
154 3a8u_X Omega-amino acid--pyruv 99.2 7.8E-11 2.7E-15 91.1 8.6 140 5-159 292-447 (449)
155 3cai_A Possible aminotransfera 99.2 1.1E-10 3.8E-15 88.8 9.1 137 8-154 232-404 (406)
156 2ez2_A Beta-tyrosinase, tyrosi 99.2 3.2E-10 1.1E-14 87.8 11.6 151 2-160 258-432 (456)
157 3gbx_A Serine hydroxymethyltra 99.2 3.9E-10 1.3E-14 86.0 11.5 142 5-158 235-395 (420)
158 3lvm_A Cysteine desulfurase; s 99.1 1.1E-10 3.6E-15 89.4 8.0 145 2-162 227-402 (423)
159 1mdo_A ARNB aminotransferase; 99.1 1.2E-09 4.2E-14 82.7 12.9 147 2-162 188-389 (393)
160 3tfu_A Adenosylmethionine-8-am 99.1 2.6E-10 8.7E-15 88.8 8.9 134 7-161 310-455 (457)
161 3hmu_A Aminotransferase, class 99.1 2.8E-10 9.7E-15 88.9 8.9 142 3-159 295-452 (472)
162 1jg8_A L-ALLO-threonine aldola 99.1 7.1E-10 2.4E-14 82.6 10.6 130 9-159 209-346 (347)
163 1rv3_A Serine hydroxymethyltra 99.1 1.2E-09 4.2E-14 85.5 11.6 146 4-158 258-430 (483)
164 1ax4_A Tryptophanase; tryptoph 99.1 1.2E-09 4.1E-14 84.7 11.5 145 10-160 274-442 (467)
165 1svv_A Threonine aldolase; str 99.1 1.4E-09 4.8E-14 81.1 10.7 133 7-159 221-358 (359)
166 2oga_A Transaminase; PLP-depen 99.0 2.3E-09 7.7E-14 81.7 11.6 145 2-160 215-397 (399)
167 3i5t_A Aminotransferase; pyrid 99.0 6.6E-10 2.3E-14 86.9 8.6 140 6-160 296-455 (476)
168 1ibj_A CBL, cystathionine beta 99.0 3.1E-09 1.1E-13 82.9 12.1 144 2-158 280-461 (464)
169 2rfv_A Methionine gamma-lyase; 99.0 3.6E-09 1.2E-13 80.6 12.2 140 1-158 211-395 (398)
170 1qz9_A Kynureninase; kynurenin 99.0 4.2E-10 1.4E-14 85.9 7.0 138 4-160 230-403 (416)
171 1b9h_A AHBA synthase, protein 99.0 1.1E-08 3.9E-13 77.3 13.8 144 2-158 188-387 (388)
172 1wyu_A Glycine dehydrogenase ( 99.0 1.8E-09 6.1E-14 83.4 9.4 94 52-156 340-437 (438)
173 2po3_A 4-dehydrase; external a 98.9 6.5E-09 2.2E-13 79.8 10.2 145 2-160 200-387 (424)
174 2yky_A Beta-transaminase; tran 98.5 1E-10 3.5E-15 91.3 0.0 142 2-160 302-461 (465)
175 2cjg_A L-lysine-epsilon aminot 98.9 4.2E-09 1.4E-13 81.6 8.0 132 8-159 303-448 (449)
176 3ke3_A Putative serine-pyruvat 98.9 5.8E-08 2E-12 73.5 13.4 141 7-160 205-377 (379)
177 3mc6_A Sphingosine-1-phosphate 98.9 2.1E-08 7.2E-13 78.5 11.1 141 2-162 281-440 (497)
178 2oqx_A Tryptophanase; lyase, p 98.8 1.2E-09 4.1E-14 84.7 3.5 100 59-160 328-443 (467)
179 3mad_A Sphingosine-1-phosphate 98.8 4.6E-08 1.6E-12 76.9 11.7 142 2-162 313-472 (514)
180 1cs1_A CGS, protein (cystathio 98.8 2.8E-07 9.7E-12 69.8 14.2 138 2-160 200-384 (386)
181 3a9z_A Selenocysteine lyase; P 98.8 2.7E-08 9.1E-13 76.3 8.3 144 6-161 250-430 (432)
182 3cog_A Cystathionine gamma-lya 98.7 3.4E-07 1.2E-11 70.0 13.4 143 2-160 215-399 (403)
183 2c81_A Glutamine-2-deoxy-scyll 98.7 4.2E-07 1.4E-11 69.5 13.9 149 2-161 194-416 (418)
184 3e9k_A Kynureninase; kynurenin 98.7 1.3E-08 4.5E-13 79.0 4.9 114 31-161 333-463 (465)
185 3vax_A Putative uncharacterize 98.7 1.6E-08 5.5E-13 76.6 5.1 115 31-158 262-399 (400)
186 2z67_A O-phosphoseryl-tRNA(SEC 98.7 2.1E-07 7.2E-12 72.2 10.8 138 3-156 300-455 (456)
187 2a7v_A Serine hydroxymethyltra 98.7 3.6E-07 1.2E-11 71.7 12.0 147 4-158 268-440 (490)
188 2dgk_A GAD-beta, GADB, glutama 98.6 1.7E-07 5.9E-12 72.5 9.8 152 2-162 263-437 (452)
189 1pff_A Methionine gamma-lyase; 98.6 3.4E-07 1.1E-11 67.8 11.0 44 1-45 146-194 (331)
190 2fnu_A Aminotransferase; prote 98.6 1.2E-06 4E-11 65.7 13.2 139 9-160 189-373 (375)
191 3dr4_A Putative perosamine syn 98.6 1.4E-07 4.6E-12 71.5 7.4 141 2-156 206-390 (391)
192 1gc0_A Methionine gamma-lyase; 98.6 2.9E-06 1E-10 64.5 14.3 136 2-158 213-396 (398)
193 3qhx_A Cystathionine gamma-syn 98.6 1.5E-06 5.1E-11 66.2 12.6 139 2-156 214-391 (392)
194 3ndn_A O-succinylhomoserine su 98.5 1.5E-06 5.1E-11 66.8 12.2 142 2-156 229-413 (414)
195 3hbx_A GAD 1, glutamate decarb 98.5 3.2E-07 1.1E-11 72.2 8.4 151 2-162 278-447 (502)
196 1o69_A Aminotransferase; struc 98.5 3.2E-06 1.1E-10 64.2 13.2 148 2-158 184-386 (394)
197 1js3_A DDC;, DOPA decarboxylas 98.5 2.5E-06 8.7E-11 66.5 12.2 144 2-160 305-475 (486)
198 3acz_A Methionine gamma-lyase; 98.5 1.5E-06 5.3E-11 66.0 10.6 135 2-158 207-388 (389)
199 1qgn_A Protein (cystathionine 98.4 4.9E-06 1.7E-10 64.6 12.9 140 2-158 263-444 (445)
200 1n8p_A Cystathionine gamma-lya 98.4 1.3E-05 4.3E-10 61.1 14.0 141 2-158 205-390 (393)
201 1ohv_A 4-aminobutyrate aminotr 98.4 1.1E-06 3.6E-11 68.6 8.0 111 30-159 354-471 (472)
202 2qma_A Diaminobutyrate-pyruvat 98.4 1.5E-06 5.1E-11 68.1 8.7 102 52-159 390-496 (497)
203 2okj_A Glutamate decarboxylase 98.4 5.4E-06 1.8E-10 65.0 11.9 149 2-159 315-502 (504)
204 3uwc_A Nucleotide-sugar aminot 98.3 1.3E-05 4.6E-10 59.9 12.9 144 3-160 190-372 (374)
205 2x3l_A ORN/Lys/Arg decarboxyla 98.3 6.4E-07 2.2E-11 69.4 4.2 68 76-159 284-353 (446)
206 3bb8_A CDP-4-keto-6-deoxy-D-gl 98.2 3.9E-05 1.3E-09 59.0 13.2 90 61-157 313-434 (437)
207 3frk_A QDTB; aminotransferase, 98.2 9.3E-06 3.2E-10 61.0 9.4 146 4-162 188-371 (373)
208 3nyt_A Aminotransferase WBPE; 98.2 6E-05 2.1E-09 56.4 13.0 142 2-161 187-366 (367)
209 3k40_A Aromatic-L-amino-acid d 98.1 3.3E-05 1.1E-09 60.3 11.0 102 52-161 369-473 (475)
210 3vp6_A Glutamate decarboxylase 98.1 3.9E-05 1.3E-09 60.4 10.9 110 51-162 384-508 (511)
211 3e77_A Phosphoserine aminotran 98.1 6.7E-05 2.3E-09 57.0 11.4 119 31-159 249-375 (377)
212 4e1o_A HDC, histidine decarbox 98.0 5.7E-05 1.9E-09 59.0 11.0 101 52-160 376-479 (481)
213 2cb1_A O-acetyl homoserine sul 98.0 0.00043 1.5E-08 52.8 14.6 135 2-157 204-410 (412)
214 3m5u_A Phosphoserine aminotran 97.9 0.00042 1.4E-08 52.2 13.3 138 8-159 200-360 (361)
215 3ri6_A O-acetylhomoserine sulf 97.9 5.2E-05 1.8E-09 58.5 8.1 93 54-156 298-429 (430)
216 3nmy_A Xometc, cystathionine g 97.9 0.00024 8.1E-09 54.2 11.5 140 2-157 215-397 (400)
217 4ao9_A Beta-phenylalanine amin 97.6 0.0004 1.4E-08 54.0 9.6 140 5-160 291-447 (454)
218 3ju7_A Putative PLP-dependent 97.6 0.002 6.8E-08 48.6 12.9 138 8-159 197-375 (377)
219 3b8x_A WBDK, pyridoxamine 5-ph 97.5 0.0024 8.1E-08 48.0 12.1 95 53-152 267-389 (390)
220 3qm2_A Phosphoserine aminotran 97.5 0.0021 7.2E-08 48.9 11.7 114 31-159 264-385 (386)
221 4a0g_A Adenosylmethionine-8-am 97.5 1.2E-05 4.1E-10 66.9 -0.7 144 6-160 669-829 (831)
222 1c4k_A Protein (ornithine deca 97.3 0.0063 2.2E-07 50.0 13.5 51 103-160 516-567 (730)
223 2fq6_A Cystathionine beta-lyas 97.2 0.0016 5.5E-08 49.9 8.4 140 2-157 232-412 (415)
224 2jis_A Cysteine sulfinic acid 97.2 0.0096 3.3E-07 46.7 12.6 105 52-158 397-514 (515)
225 4atq_A 4-aminobutyrate transam 97.2 0.0038 1.3E-07 48.5 10.1 147 5-159 299-455 (456)
226 3ou5_A Serine hydroxymethyltra 97.0 0.012 4.3E-07 45.6 11.5 144 4-157 268-439 (490)
227 2ctz_A O-acetyl-L-homoserine s 96.6 0.0079 2.7E-07 46.0 7.5 24 130-156 397-420 (421)
228 4e3q_A Pyruvate transaminase; 96.2 0.12 4E-06 40.3 12.3 138 7-159 312-468 (473)
229 2vyc_A Biodegradative arginine 95.6 0.13 4.3E-06 42.6 10.7 50 103-159 555-605 (755)
230 3i16_A Aluminum resistance pro 95.1 0.029 1E-06 43.2 4.9 97 3-113 247-354 (427)
231 3jzl_A Putative cystathionine 94.7 0.12 4E-06 39.5 7.3 97 3-113 230-337 (409)
232 3hl2_A O-phosphoseryl-tRNA(SEC 94.4 1.4 4.9E-05 34.4 17.3 147 11-162 294-464 (501)
233 3hvy_A Cystathionine beta-lyas 93.6 0.12 4.2E-06 39.7 5.5 93 7-113 252-354 (427)
234 3ht4_A Aluminum resistance pro 93.5 0.099 3.4E-06 40.2 4.9 94 3-113 240-343 (431)
235 3n75_A LDC, lysine decarboxyla 84.0 3.2 0.00011 34.2 6.9 48 103-157 510-558 (715)
236 2gjh_A Designed protein; oblig 69.6 9.6 0.00033 19.6 4.7 30 131-160 2-31 (62)
237 2yh5_A DAPX protein, BAMC; lip 51.0 43 0.0015 20.9 6.6 91 61-162 23-123 (127)
238 2a1v_A Conserved hypothetical 49.1 44 0.0015 21.3 5.2 45 106-152 66-111 (144)
239 1qys_A TOP7; alpha-beta, novel 45.2 41 0.0014 19.1 4.9 31 130-160 45-75 (106)
240 1uta_A FTSN, MSGA, cell divisi 45.0 26 0.00091 19.6 3.4 45 102-154 21-68 (81)
241 2j6v_A UV endonuclease, UVDE; 42.7 45 0.0015 24.1 5.0 46 105-159 106-151 (301)
242 3ih6_A Putative zinc protease; 39.3 30 0.001 22.6 3.5 55 105-161 57-113 (197)
243 1s28_A ORF1; type III chaperon 37.8 75 0.0026 20.0 6.0 59 103-161 64-127 (132)
244 2kfp_A Pspto_3016 protein; alp 36.5 47 0.0016 20.6 3.8 42 106-151 69-111 (125)
245 3hqn_D Pyruvate kinase, PK; TI 35.9 1E+02 0.0034 24.3 6.2 44 103-160 33-76 (499)
246 2ctj_A Vigilin; K homology typ 33.7 73 0.0025 18.6 6.5 50 108-162 39-89 (95)
247 3m0z_A Putative aldolase; MCSG 33.4 45 0.0015 23.4 3.5 70 65-156 176-248 (249)
248 4gfq_A Ribosome-recycling fact 32.5 1.2E+02 0.0041 20.8 9.0 49 104-158 99-147 (209)
249 3hdi_A Processing protease; CA 32.1 38 0.0013 25.1 3.3 31 130-161 293-323 (421)
250 1e0t_A Pyruvate kinase, PK; ph 32.1 1.2E+02 0.0041 23.6 6.1 44 103-160 15-58 (470)
251 2fki_A Protein YJBR; NESG, GFT 31.7 92 0.0031 19.2 4.8 44 105-151 54-98 (126)
252 3gwb_A Peptidase M16 inactive 31.5 43 0.0015 24.8 3.6 31 130-161 309-339 (434)
253 3m6y_A 4-hydroxy-2-oxoglutarat 31.4 49 0.0017 23.5 3.4 72 65-159 199-274 (275)
254 3t05_A Pyruvate kinase, PK; te 30.5 1.3E+02 0.0045 24.3 6.2 44 103-160 36-79 (606)
255 2yqr_A KIAA0907 protein; struc 29.3 92 0.0031 19.2 4.2 27 133-159 74-100 (119)
256 1zpv_A ACT domain protein; str 29.3 76 0.0026 17.7 3.7 54 104-158 19-72 (91)
257 2je8_A Beta-mannosidase; glyco 28.4 2.4E+02 0.0081 23.7 7.7 74 67-163 356-429 (848)
258 3hlu_A Uncharacterized protein 28.2 94 0.0032 18.2 5.2 49 103-153 17-67 (96)
259 3nq4_A 6,7-dimethyl-8-ribityll 27.6 83 0.0028 20.5 3.9 24 2-25 8-32 (156)
260 2e28_A Pyruvate kinase, PK; al 27.6 1.5E+02 0.005 23.9 6.0 44 103-160 16-59 (587)
261 3d3y_A Uncharacterized protein 27.2 59 0.002 23.9 3.6 31 130-161 312-342 (425)
262 3m05_A Uncharacterized protein 27.0 78 0.0027 19.4 3.5 51 103-157 17-70 (114)
263 3amj_B Zinc peptidase inactive 26.9 60 0.0021 23.9 3.6 55 106-161 277-332 (424)
264 3pg6_A E3 ubiquitin-protein li 26.7 72 0.0024 20.8 3.4 33 121-158 70-102 (159)
265 3gg8_A Pyruvate kinase; malari 26.3 1.6E+02 0.0053 23.3 5.8 43 103-159 49-91 (511)
266 2nvn_A Hypothetical protein; s 26.1 27 0.00091 21.8 1.2 7 5-11 10-16 (122)
267 1kaf_A Transcription regulator 25.0 87 0.003 19.0 3.3 27 67-94 67-93 (108)
268 2plg_A TLL0839 protein; hypoth 24.0 1.6E+02 0.0054 19.3 5.5 55 102-158 86-144 (163)
269 1ge9_A Ribosome recycling fact 23.6 1.7E+02 0.0058 19.6 6.1 49 104-158 77-125 (184)
270 1ei7_A Coat protein; disordere 23.4 96 0.0033 20.2 3.5 38 68-114 48-86 (158)
271 3ami_A Zinc peptidase; alpha/b 23.3 91 0.0031 23.2 4.1 31 130-161 309-340 (445)
272 1ass_A Thermosome; chaperonin, 23.3 1E+02 0.0036 19.8 3.8 41 41-85 41-81 (159)
273 3nek_A Nitrogen repressor-like 22.5 1.3E+02 0.0043 21.1 4.3 30 129-158 39-68 (238)
274 2it9_A Hypothetical protein; s 22.2 35 0.0012 21.4 1.2 7 5-11 8-14 (127)
275 2ib0_A Conserved hypothetical 21.8 1.8E+02 0.0061 19.2 6.2 56 51-112 52-107 (170)
276 3khd_A Pyruvate kinase; malari 21.7 1.6E+02 0.0056 23.2 5.1 41 103-157 59-99 (520)
277 2qyx_A Uncharacterized protein 21.6 1.3E+02 0.0046 21.0 4.3 29 130-158 40-68 (238)
278 1pp9_B Ubiquinol-cytochrome C 21.0 83 0.0029 23.2 3.4 31 130-161 319-349 (439)
279 3m0m_A L-rhamnose isomerase; b 21.0 2.5E+02 0.0087 21.5 6.1 27 50-76 11-37 (438)
280 1ise_A Ribosome recycling fact 21.0 1.9E+02 0.0067 19.3 5.7 49 104-158 75-123 (185)
281 1wqg_A Ribosome recycling fact 20.8 2E+02 0.0067 19.3 5.8 49 104-158 75-123 (185)
282 1eh1_A Ribosome recycling fact 20.6 2E+02 0.0068 19.2 5.3 49 105-158 76-124 (185)
283 1gml_A T-complex protein 1 sub 20.6 1.2E+02 0.0041 19.9 3.8 14 72-85 74-87 (178)
284 1is1_A Ribosome recycling fact 20.6 2E+02 0.0068 19.2 5.4 49 104-158 75-123 (185)
285 1dd5_A Ribosome recycling fact 20.5 2E+02 0.0068 19.2 7.1 48 105-158 76-123 (185)
286 1kz1_A 6,7-dimethyl-8-ribityll 20.4 1.2E+02 0.0042 19.7 3.7 23 2-24 13-36 (159)
287 3eoq_A Putative zinc protease; 20.4 98 0.0033 22.7 3.7 54 106-161 269-323 (406)
No 1
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.91 E-value=3.4e-23 Score=159.93 Aligned_cols=161 Identities=42% Similarity=0.847 Sum_probs=138.7
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIECA 80 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 80 (163)
.||+||+|+||++++++++.+.+.+...+++++++.|.++..++.+..++++++++.++.++++++.+.+.|++.|+++.
T Consensus 274 ~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 353 (435)
T 3piu_A 274 DLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCL 353 (435)
T ss_dssp SSCCGGGCEEEEEESCHHHHHHHHHHGGGSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEC
T ss_pred ccCCCceeEEEEEeCCHHHHHHHHHHhhcCCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 47899999999999667888888887777788999999999999998776778899999999999999999999999999
Q ss_pred cCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHHHhh
Q 042816 81 KSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQTCK 160 (163)
Q Consensus 81 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~~~ 160 (163)
++++|+|+|++++.........+..++++.|++++||.+.||..|+..+++++||+++..+++++++++++|.++++++.
T Consensus 354 ~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~e~i~~~l~~l~~~l~~~~ 433 (435)
T 3piu_A 354 NGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFVGEYY 433 (435)
T ss_dssp CCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHHHHHHHHHHHHHHC
T ss_pred CCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999986542223335678999998866999999999987668999999986688999999999999998765
Q ss_pred h
Q 042816 161 S 161 (163)
Q Consensus 161 ~ 161 (163)
.
T Consensus 434 ~ 434 (435)
T 3piu_A 434 N 434 (435)
T ss_dssp -
T ss_pred C
Confidence 3
No 2
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.91 E-value=6.1e-23 Score=158.16 Aligned_cols=159 Identities=40% Similarity=0.814 Sum_probs=134.1
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIECA 80 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 80 (163)
.||+||+|+||++++++++++.+.+...++++|++.|.++..++++..++++++++.++.++++++++.+.|+++|+++.
T Consensus 269 ~~g~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 348 (428)
T 1iay_A 269 DMGLPGFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIKCL 348 (428)
T ss_dssp TSSCGGGCEEEEEESCHHHHHHHHHHHTTSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBC
T ss_pred hcCCCCceEEEEEeCCHHHHHHHHHHHhcccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 47899999999999668899988877766789999999999999998755778999999999999999999999898888
Q ss_pred cCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHHHh
Q 042816 81 KSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQTC 159 (163)
Q Consensus 81 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~~ 159 (163)
++++|+|+|++++.........++.++++.|++++||.+.||..|+..+++++||+++..+++++++++++|.+++++.
T Consensus 349 ~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~ 427 (428)
T 1iay_A 349 KNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFVGVE 427 (428)
T ss_dssp CCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHHHHHHHTT
T ss_pred CCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhcc
Confidence 8889999999998642112222456889988875699999999887555689999998558999999999999988754
No 3
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.90 E-value=7.8e-23 Score=158.88 Aligned_cols=150 Identities=17% Similarity=0.286 Sum_probs=130.3
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc---
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL--- 75 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--- 75 (163)
.|| ||+|+||+++ ++++++.+...... +++|++.|.++..+|+++.+ ++++++.++.|+++++++.+.|++.
T Consensus 290 ~~~-~GlriG~v~~-~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 366 (448)
T 3aow_A 290 ILA-PGFRIGWMVG-DPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYL-EKHIPEIRKFYKPRRDAMLEALEEFMPE 366 (448)
T ss_dssp TTC-GGGCCEEEEE-CHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred hcc-ccccEEEEEe-CHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 377 9999999999 89999999877653 57899999999999988654 7889999999999999999999985
Q ss_pred CCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCC--CCceEEEEEecCChhHHHHHHHHHH
Q 042816 76 GIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCI--EPGWFSFSFTLLTEKDIHVVMERIR 153 (163)
Q Consensus 76 g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~--~~~~iRi~~~~~~~~~l~~~~~~l~ 153 (163)
|+++..|.+|+|+|++++... ++.++++.|++ +||.+.||..|+.. .++++||+++..+++++++++++|.
T Consensus 367 g~~~~~p~~g~~~~v~~~~~~------~~~~l~~~l~~-~gV~v~pg~~f~~~~~~~~~iRls~~~~~~e~i~~~~~~L~ 439 (448)
T 3aow_A 367 GVKWTKPEGGMFIWVTLPDGI------DSKKMLERAIK-KGVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLA 439 (448)
T ss_dssp TCEECCCSBSSEEEEECSTTC------CHHHHHHHHHH-TTEECEEGGGGSTTCCCCSEEEEECSSSCTHHHHHHHHHHH
T ss_pred CeEEeCCCccEEEEEEcCCCC------CHHHHHHHHHH-CCcEEEcchhhcCCCCCCCEEEEEeCCCCHHHHHHHHHHHH
Confidence 788888999999999998643 67889999987 69999999988643 3689999998757899999999999
Q ss_pred HHHHHhh
Q 042816 154 RISQTCK 160 (163)
Q Consensus 154 ~~~~~~~ 160 (163)
+++++..
T Consensus 440 ~~l~~~~ 446 (448)
T 3aow_A 440 ETIKEEL 446 (448)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9987653
No 4
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.89 E-value=2.2e-23 Score=161.15 Aligned_cols=148 Identities=15% Similarity=0.183 Sum_probs=124.9
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCChH-HH-------HHHHHHHHHHHHHHHHHHHH
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSDTK-FV-------QKFININRERLRRLYVKFVA 70 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~-~~-------~~~~~~~~~~~~~~~~~l~~ 70 (163)
+||+||+|+||++++++++++.+.+.... ++++.+.|.++..+|+++. ++ ++++++.++.|+++++++.+
T Consensus 252 ~~g~~G~RiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 331 (427)
T 2hox_A 252 FTGHSGSRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITA 331 (427)
T ss_dssp HTSCGGGCCEEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCceEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHH
Confidence 37899999999999558999999988774 6799999999999998642 21 46788899999999999999
Q ss_pred Hhhhc-CCcc--------------ccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEE
Q 042816 71 GLRQL-GIEC--------------AKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSF 135 (163)
Q Consensus 71 ~l~~~-g~~~--------------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi 135 (163)
.|++. |+.+ ..|++|+|+|++++. ++.++++.|++++||.|.||+.|+. +++++||
T Consensus 332 ~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~--------~~~~~~~~ll~~~gI~v~pg~~f~~-~~~~~Ri 402 (427)
T 2hox_A 332 LLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW--------EEDKDCYQTFQNGRINTQNGVGFEA-SSRYVRL 402 (427)
T ss_dssp HHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECS--------GGGCSHHHHHHHTTEECEEGGGGTS-CTTEEEE
T ss_pred HHHhCcCccccccccccccccccccCCCCceEEEEECCC--------cHHHHHHHHHHHCCEEEcCCCccCC-CCCEEEE
Confidence 99987 6543 357789999999985 3467888887669999999999986 5789999
Q ss_pred EEecCChhHHHHHHHHHHHHHHH
Q 042816 136 SFTLLTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 136 ~~~~~~~~~l~~~~~~l~~~~~~ 158 (163)
|++. +++++++++++|.+++.+
T Consensus 403 s~~~-~~e~l~~~l~~l~~~~~~ 424 (427)
T 2hox_A 403 SLIK-TQDDFDQLMYYLKDMVKA 424 (427)
T ss_dssp ECSS-CHHHHHHHHHHHHHHHTC
T ss_pred EecC-CHHHHHHHHHHHHHHHhh
Confidence 9998 889999999999998754
No 5
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.88 E-value=2.3e-22 Score=154.05 Aligned_cols=148 Identities=16% Similarity=0.294 Sum_probs=128.6
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIE 78 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 78 (163)
.||+||+|+||+++ ++++++.+...... ++++.+.|.++..+|++. ++++++.++.++++++.+.+.|+++|++
T Consensus 254 ~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 329 (404)
T 2o1b_A 254 GYNMSGFRVGFAVG-NKDMIQALKKYQTHTNAGMFGALQDAAIYALNHY---DDFLEEQSNVFKTRRDRFEAMLAKADLP 329 (404)
T ss_dssp TTTCGGGCCEEEEE-CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hccCchhheEeEec-CHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHhcCCe
Confidence 47889999999999 99999999877653 578999999999998764 5778999999999999999999998999
Q ss_pred cccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHHH
Q 042816 79 CAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 79 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~ 158 (163)
+.+|++|+|+|++++... ++.++++.|++++||.+.||..|+...++++||+++. +++++++++++|.+++++
T Consensus 330 ~~~~~~g~~~~~~~~~~~------~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-~~e~l~~~l~~l~~~l~~ 402 (404)
T 2o1b_A 330 FVHAKGGIYVWLETPPGY------DSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL-DDQKLDEAAIRLTELAYL 402 (404)
T ss_dssp EECCCBSSEEEEECCTTC------CHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS-CTTHHHHHHHHHHGGGGG
T ss_pred ecCCCcceEEEEeCCCCC------CHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC-CHHHHHHHHHHHHHHHHh
Confidence 988999999999998543 5678999888668999999998875457899999998 889999999999988765
Q ss_pred h
Q 042816 159 C 159 (163)
Q Consensus 159 ~ 159 (163)
+
T Consensus 403 ~ 403 (404)
T 2o1b_A 403 Y 403 (404)
T ss_dssp G
T ss_pred h
Confidence 4
No 6
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.88 E-value=1.6e-22 Score=155.98 Aligned_cols=150 Identities=15% Similarity=0.207 Sum_probs=128.6
Q ss_pred CCCCceeEEEEEecCHHH--------HHHHHHhhc--ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 042816 2 LSLPGFRISVIYSYNNSV--------LAAAKKLAR--FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAG 71 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~--------~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 71 (163)
||++|+|+||+++ ++++ ++.+.+... ..+++++.|.++..++.+.. .+++++.++.++++++++.+.
T Consensus 272 ~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~ 348 (432)
T 3ei9_A 272 AGFTGVRLGWTVI-PKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEG--LEAMHKVIGFYKENTNIIIDT 348 (432)
T ss_dssp HCTTTTCCEEEEC-CTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcccceEEEEE-ChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhccc--HHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999 6666 777776654 35689999999999998543 467899999999999999999
Q ss_pred hhhcCCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHH
Q 042816 72 LRQLGIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMER 151 (163)
Q Consensus 72 l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~ 151 (163)
|+++|+++.++.+|+|+|++++.. ++.+++..|++++||.+.||+.|+..+++++|||+.. +++++++++++
T Consensus 349 L~~~g~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~~-~~e~l~~~l~r 420 (432)
T 3ei9_A 349 FTSLGYDVYGGKNAPYVWVHFPNQ-------SSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFG-HRENILEACRR 420 (432)
T ss_dssp HHHTTCCEEECSSSSEEEEECTTS-------CHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHH
T ss_pred HHHCCceecCCCcceEEEEECCCC-------CHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEecC-CHHHHHHHHHH
Confidence 999999999888999999999842 6788999888877999999999986668999999987 99999999999
Q ss_pred HHHHHHHhhhc
Q 042816 152 IRRISQTCKSH 162 (163)
Q Consensus 152 l~~~~~~~~~~ 162 (163)
|.+-...++++
T Consensus 421 l~~~~~~~~~~ 431 (432)
T 3ei9_A 421 FKQLYKHHHHH 431 (432)
T ss_dssp HHHHHTTSCC-
T ss_pred HHHHhhhcccC
Confidence 99887777664
No 7
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.88 E-value=3.2e-22 Score=152.27 Aligned_cols=147 Identities=25% Similarity=0.454 Sum_probs=124.1
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIE 78 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 78 (163)
.||+||+|+||+++ ++++++.+...... ++++.+.|.++..+|++.....+++++.++.++++++++.+.|+++|++
T Consensus 235 ~~~~~G~RiG~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 313 (385)
T 1b5p_A 235 AFAMTGWRIGYACG-PKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLK 313 (385)
T ss_dssp TTTCGGGCCEEEEC-CHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred hcCCcccceEEEEe-CHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 47899999999999 89999999877653 5789999999999997610005678999999999999999999988999
Q ss_pred cccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHH
Q 042816 79 CAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQ 157 (163)
Q Consensus 79 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~ 157 (163)
+.+|++|+|+|++++.. + .++.++++.|++ +||.+.||+.|+. ++++|||++. +.+++++++++|.++++
T Consensus 314 ~~~~~~~~~~~~~~~~~----~-~~~~~l~~~l~~-~gv~v~~g~~f~~--~~~iRis~~~-~~~~i~~~l~~l~~~l~ 383 (385)
T 1b5p_A 314 AVRPSGAFYVLMDTSPI----A-PDEVRAAERLLE-AGVAVVPGTDFAA--FGHVRLSYAT-SEENLRKALERFARVLG 383 (385)
T ss_dssp BCCCSBTTEEEEECTTT----C-SSHHHHHHHHHH-TTEECEESGGGTC--TTEEEEECCS-CHHHHHHHHHHGGGGC-
T ss_pred ecCCCeeEEEEEecCCC----C-CCHHHHHHHHHH-CCeEEecccccCC--CCeEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 99999999999998731 0 267889998884 8999999999975 6899999996 99999999999987654
No 8
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.88 E-value=6.3e-22 Score=151.79 Aligned_cols=153 Identities=20% Similarity=0.335 Sum_probs=130.4
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIE 78 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 78 (163)
.||+||+|+||+++ ++++++.+...... ++++.+.|.++..+|++. ++++++.++.++++++++.+.|+++|++
T Consensus 246 ~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 321 (412)
T 2x5d_A 246 SYNMAGWRIGFMVG-NPELVSALARIKSYHDYGTFTPLQVAAIAALEGD---QQCVRDIARQYQQRRDVLVKGLREAGWM 321 (412)
T ss_dssp CCSCTTSCCEEEEE-CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSC---SHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred ccCCcccceEEEEc-CHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHHCCCE
Confidence 47889999999999 99999999877653 678999999999999875 4678899999999999999999988999
Q ss_pred cccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHHH
Q 042816 79 CAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 79 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~ 158 (163)
+.+|++|+|+|++++..+. ..++.++++.|++++||.+.||+.|+..+++++||+++. +++++++++++|.+++++
T Consensus 322 ~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~ 397 (412)
T 2x5d_A 322 VENPKASMYVWAKIPEPYA---HLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE-NRDRLRQAVRGIKAMFRA 397 (412)
T ss_dssp CCCCSBSSEEEEECCTTTG---GGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHH
T ss_pred ecCCCeeeEEEEEcCCccC---CCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 9899999999999975320 014678999887767999999999875457899999998 899999999999999987
Q ss_pred hhh
Q 042816 159 CKS 161 (163)
Q Consensus 159 ~~~ 161 (163)
+..
T Consensus 398 ~~~ 400 (412)
T 2x5d_A 398 DGL 400 (412)
T ss_dssp TTC
T ss_pred cCC
Confidence 653
No 9
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.88 E-value=4.4e-22 Score=153.45 Aligned_cols=149 Identities=15% Similarity=0.251 Sum_probs=123.7
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCC---hHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSD---TKFVQKFININRERLRRLYVKFVAGLRQL 75 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 75 (163)
.|+ ||+|+||+++ ++++++.+...... +++|.+.|.++..+|++ +.+ .++++++++.|+++++.+.+.|+++
T Consensus 264 ~~~-~GlRiG~~~~-~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~ 340 (425)
T 2r2n_A 264 IIS-SGLRIGFLTG-PKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGF-MAHVDRVIDFYSNQKDAILAAADKW 340 (425)
T ss_dssp TTC-STTCCEEEEE-EHHHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcc-CccceEEEec-CHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcccchH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 477 9999999999 89999999887653 68899999999999986 334 6889999999999999999999985
Q ss_pred --CC-ccccCCceeEEEeecCCcccCCChhhHHH-HHHHHHHhcCeEEcCCCCCCCC---CCceEEEEEecCChhHHHHH
Q 042816 76 --GI-ECAKSNGGFYCWADMSGLISSYSEKGELE-LWDKLLNVAKVNVTPGSSCHCI---EPGWFSFSFTLLTEKDIHVV 148 (163)
Q Consensus 76 --g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~gi~v~pg~~f~~~---~~~~iRi~~~~~~~~~l~~~ 148 (163)
|+ .+..|++|+|+|++++... ++.+ +.+.|. ++||.+.||+.|+.. +.+++|||++..++++++++
T Consensus 341 ~~~~~~~~~p~~g~~~~~~~~~~~------~~~~~~~~~l~-~~gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~ 413 (425)
T 2r2n_A 341 LTGLAEWHVPAAGMFLWIKVKGIN------DVKELIEEKAV-KMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVA 413 (425)
T ss_dssp CSSSEEECCCSBSSEEEEEETTCS------CCHHHHHTHHH-HTTEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHH
T ss_pred CCCCeEEeCCCceEEEEEEeCCCC------CHHHHHHHHHH-HCCcEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHH
Confidence 76 5677899999999998643 3455 455555 599999999999753 25899999984499999999
Q ss_pred HHHHHHHHHHh
Q 042816 149 MERIRRISQTC 159 (163)
Q Consensus 149 ~~~l~~~~~~~ 159 (163)
+++|.+++++.
T Consensus 414 ~~~l~~~l~~~ 424 (425)
T 2r2n_A 414 FQVLAQLIKES 424 (425)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999988653
No 10
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.88 E-value=9.3e-22 Score=149.59 Aligned_cols=151 Identities=19% Similarity=0.322 Sum_probs=130.5
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIE 78 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 78 (163)
.||+||+|+||+++ ++++++.+...... ++++.+.|.++..+|++... ++++++.++.++++++.+.+.|+++|++
T Consensus 234 ~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 311 (389)
T 1gd9_A 234 TFAMTGWRLGFVAA-PSWIIERMVKFQMYNATCPVTFIQYAAAKALKDERS-WKAVEEMRKEYDRRRKLVWKRLNEMGLP 311 (389)
T ss_dssp TTTCGGGCCEEEEC-CHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hcCCcccceEEEEE-CHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCc-chHHHHHHHHHHHHHHHHHHHHHHcCCe
Confidence 37889999999999 89999999877663 67899999999999998632 3488999999999999999999998999
Q ss_pred cccCCceeEEEeecCC-cccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHH
Q 042816 79 CAKSNGGFYCWADMSG-LISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQ 157 (163)
Q Consensus 79 ~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~ 157 (163)
+..|++|+++|++++. .. +..++++.|++++||.+.||..|+..+++++||+++. +++++++++++|.++++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~~~ 384 (389)
T 1gd9_A 312 TVKPKGAFYIFPRIRDTGL------TSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT-AYEKLEEAMDRMERVLK 384 (389)
T ss_dssp CCCCCBTTEECCBCGGGTC------CHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS-CHHHHHHHHHHHHHHHH
T ss_pred ecCCCeeeEEEEeccCCCC------CHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHH
Confidence 8889999999999974 22 6788999888459999999998875457899999997 99999999999999988
Q ss_pred Hhh
Q 042816 158 TCK 160 (163)
Q Consensus 158 ~~~ 160 (163)
+.+
T Consensus 385 ~~~ 387 (389)
T 1gd9_A 385 ERK 387 (389)
T ss_dssp HTT
T ss_pred hcc
Confidence 765
No 11
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.87 E-value=5e-22 Score=153.90 Aligned_cols=147 Identities=14% Similarity=0.160 Sum_probs=125.3
Q ss_pred CCCCCceeEEEEEecCHHHHH--------HHHHhhc--ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHH
Q 042816 1 DLSLPGFRISVIYSYNNSVLA--------AAKKLAR--FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVA 70 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~--------~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 70 (163)
.||++|+|+||+++ ++++++ .+..... ..+++++.|.++..++.+.. .+++++.++.++++++++.+
T Consensus 283 ~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~ 359 (449)
T 3qgu_A 283 YAGFTGVRLGWTVV-PKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEG--LKEMNAMIKFYKENAQILKT 359 (449)
T ss_dssp GGTCTTCCCEEEEC-CTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHH--HHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCccceeEEEec-CHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHH
Confidence 37899999999999 777654 3444433 35789999999999998742 47789999999999999999
Q ss_pred HhhhcCCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHH
Q 042816 71 GLRQLGIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVME 150 (163)
Q Consensus 71 ~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~ 150 (163)
.|+++|+++..|++|+|+|++++ .. ++.++++.|++++||.+.||..|+..+++++||++.. ++++++++++
T Consensus 360 ~L~~~g~~~~~~~~~~~~~~~~~-~~------~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~-~~e~i~~~l~ 431 (449)
T 3qgu_A 360 TFTEMGFSVYGGDDAPYIWVGFP-GK------PSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFG-SRENILEAVR 431 (449)
T ss_dssp HHHHTTCCEEESSSSSEEEEECT-TS------CHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHH
T ss_pred HHHHCCCeeeCCCCeeEEEEECC-CC------CHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecC-CHHHHHHHHH
Confidence 99999999999999999999998 32 6789999998867999999999986668999999887 9999999999
Q ss_pred HHHHHHHH
Q 042816 151 RIRRISQT 158 (163)
Q Consensus 151 ~l~~~~~~ 158 (163)
+|.+++++
T Consensus 432 ~l~~~~~~ 439 (449)
T 3qgu_A 432 RFKEAYGK 439 (449)
T ss_dssp HHHHHHC-
T ss_pred HHHHHHHh
Confidence 99998854
No 12
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.87 E-value=1.9e-21 Score=148.47 Aligned_cols=150 Identities=19% Similarity=0.280 Sum_probs=129.8
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CC
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL-GI 77 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~ 77 (163)
.||++|+|+||+++ ++++++.+...... .+++++.|.++..++++. ++++++.++.++++++.+.+.|+++ |+
T Consensus 254 ~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 329 (407)
T 3nra_A 254 TESLSGYRLGVAFG-SRAIIARMEKLQAIVSLRAAGYSQAVLRGWFDEA---PGWMEDRIARHQAIRDELLHVLRGCEGV 329 (407)
T ss_dssp TTCCGGGCCEEEEE-CHHHHHHHHHHHHHHTSSSCHHHHGGGGGTTCCC---TTHHHHHHHHHHHHHHHHHHHHHTSTTC
T ss_pred ccCCCeeeEEEEEc-CHHHHHHHHHHHhhhccCCChHHHHHHHHHHhcc---chHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 47899999999999 99999999887763 567888999999999865 3566788888999999999999998 89
Q ss_pred ccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHH
Q 042816 78 ECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQ 157 (163)
Q Consensus 78 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~ 157 (163)
.+..|.+|+|+|++++... .+..++++.|++++||.+.||..|+...++++||+++. +.+++++++++|.++++
T Consensus 330 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~~~~ 403 (407)
T 3nra_A 330 FARTPQAGSYLFPRLPKLA-----VAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQ-DHEAAVAAARRIVTLVE 403 (407)
T ss_dssp BCCCCSBSSEECCBCCCBS-----SCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCS-CHHHHHHHHHHHHHHHH
T ss_pred eeccCCeeEEEEEeCCCCC-----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCC-CHHHHHHHHHHHHHHHH
Confidence 9999999999999998621 26788999888767999999999986668999999998 99999999999999998
Q ss_pred Hhh
Q 042816 158 TCK 160 (163)
Q Consensus 158 ~~~ 160 (163)
+++
T Consensus 404 ~~~ 406 (407)
T 3nra_A 404 RYR 406 (407)
T ss_dssp HHB
T ss_pred Hhh
Confidence 765
No 13
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.87 E-value=1.5e-21 Score=151.42 Aligned_cols=151 Identities=17% Similarity=0.262 Sum_probs=125.0
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc--ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR--FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIEC 79 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~ 79 (163)
||+||+|+||+++.++++++.+..... .++++++.|.++..+|++... ++++++.++.++++++++.+.|+++|+++
T Consensus 276 ~~~~G~riG~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 354 (447)
T 3b46_A 276 FAATGWRIGWVLSLNAELLSYAAKAHTRICFASPSPLQEACANSINDALK-IGYFEKMRQEYINKFKIFTSIFDELGLPY 354 (447)
T ss_dssp TTCTTSCCEEEECSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHHHTCCE
T ss_pred cCCcchhhEEEEeCCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcc-hHHHHHHHHHHHHHHHHHHHHHHHCCCee
Confidence 789999999999866889998887654 367899999999999987543 57789999999999999999999999999
Q ss_pred ccCCceeEEEeecCCcc-cCC--------ChhhHHHHHHHHHHhcCeEEcCCCCCCCC-----CCceEEEEEecCChhHH
Q 042816 80 AKSNGGFYCWADMSGLI-SSY--------SEKGELELWDKLLNVAKVNVTPGSSCHCI-----EPGWFSFSFTLLTEKDI 145 (163)
Q Consensus 80 ~~~~~g~~~~~~~~~~~-~~~--------~~~~~~~~~~~l~~~~gi~v~pg~~f~~~-----~~~~iRi~~~~~~~~~l 145 (163)
..|++|+|+|++++... +.. +..++.++++.|++++||.+.||+.|+.. +++++|||++. +++++
T Consensus 355 ~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~-~~e~l 433 (447)
T 3b46_A 355 TAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCK-DDAYL 433 (447)
T ss_dssp ECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCS-CHHHH
T ss_pred cCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeC-CHHHH
Confidence 89999999999997520 000 00256789998887689999999988742 26899999997 89999
Q ss_pred HHHHHHHHH
Q 042816 146 HVVMERIRR 154 (163)
Q Consensus 146 ~~~~~~l~~ 154 (163)
++++++|.+
T Consensus 434 ~~~~~~l~~ 442 (447)
T 3b46_A 434 ENAVERLKL 442 (447)
T ss_dssp HHHHHHGGG
T ss_pred HHHHHHHHH
Confidence 999999976
No 14
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.87 E-value=5.2e-21 Score=150.49 Aligned_cols=159 Identities=14% Similarity=0.152 Sum_probs=125.3
Q ss_pred C-CCCceeEEEEEe--cCHHHHHHHHHhhcc-cCCChHHHHHHHHhcCC-----hHH--HHHHHHHHHHHHHHHHHHHHH
Q 042816 2 L-SLPGFRISVIYS--YNNSVLAAAKKLARF-SSVSAPSQNLLVSMLSD-----TKF--VQKFININRERLRRLYVKFVA 70 (163)
Q Consensus 2 ~-~~~G~RiG~~i~--~~~~~~~~~~~~~~~-~~~s~~~q~~~~~~l~~-----~~~--~~~~~~~~~~~~~~~~~~l~~ 70 (163)
| |+||+|+||+++ .++++++.+.+.... ++++.+.|.++..++++ +.+ ..++.++.++.++++++++.+
T Consensus 318 ~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~ 397 (498)
T 3ihj_A 318 YMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTED 397 (498)
T ss_dssp TTCCSSSCCEEEEEESCCHHHHHHHHHHHHHSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCcccceEEEEEecCCHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 789999999993 289999999887663 67899999999999985 222 124457888999999999999
Q ss_pred Hhhhc-CCccccCCceeEEEeecCC--cc----cCCChhhHHHHHHHHHHhcCeEEcCCCCCCC-CCCceEEEEEecCCh
Q 042816 71 GLRQL-GIECAKSNGGFYCWADMSG--LI----SSYSEKGELELWDKLLNVAKVNVTPGSSCHC-IEPGWFSFSFTLLTE 142 (163)
Q Consensus 71 ~l~~~-g~~~~~~~~g~~~~~~~~~--~~----~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~-~~~~~iRi~~~~~~~ 142 (163)
.|+++ |+++.+|+||||+|++++. .. ...+..++..++..+++++||.+.||+.|+. .+++++|++++. ++
T Consensus 398 ~L~~~~g~~~~~p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~~-~~ 476 (498)
T 3ihj_A 398 LFNQVPGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILP-PV 476 (498)
T ss_dssp HHHTSTTEECCCCCBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECCS-CH
T ss_pred HHhcCCCcEecCCCeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeCC-CH
Confidence 99998 9999999999999987642 10 0011112333467777779999999999985 457899999985 99
Q ss_pred hHHHHHHHHHHHHHHHhhh
Q 042816 143 KDIHVVMERIRRISQTCKS 161 (163)
Q Consensus 143 ~~l~~~~~~l~~~~~~~~~ 161 (163)
+++++++++|.++++++.+
T Consensus 477 e~l~~~i~~L~~~~~~~~~ 495 (498)
T 3ihj_A 477 EKLKTVLQKVKDFHINFLE 495 (498)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999887654
No 15
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.87 E-value=3.6e-21 Score=147.45 Aligned_cols=150 Identities=14% Similarity=0.199 Sum_probs=127.6
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCChHHHHHHHHH-HHHHHHHHHHHHHHHhhhc---
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSDTKFVQKFINI-NRERLRRLYVKFVAGLRQL--- 75 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~--- 75 (163)
+++||+|+||+++ ++++++.+...... ++++++.|.++..++++..+ .++..+ +++.|+++++.+.+.|.+.
T Consensus 251 ~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 328 (417)
T 3g7q_A 251 LGLPGSRCGIIIA-NDKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDL-LRLSETVIKPFYYQRVQQTIAIIRRYLSE 328 (417)
T ss_dssp GTCTTSCCEEEEC-CHHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCH-HHHHHHTHHHHHHHHHHHHHHHHHHHCCT
T ss_pred ccCCCcceEEEEe-CHHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcch-HHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 5789999999999 99999999887764 56899999999999998776 555555 8889999999999998774
Q ss_pred -CCccccCCceeEEEeecCC-cccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCC-------CceEEEEEecCChhHHH
Q 042816 76 -GIECAKSNGGFYCWADMSG-LISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIE-------PGWFSFSFTLLTEKDIH 146 (163)
Q Consensus 76 -g~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~-------~~~iRi~~~~~~~~~l~ 146 (163)
|+.+..|++|+|+|++++. .. +..++++.|.+ +||.+.||+.|.... ++++|||++. ++++++
T Consensus 329 ~~~~~~~~~~g~~~~~~~~~~~~------~~~~l~~~l~~-~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~-~~~~i~ 400 (417)
T 3g7q_A 329 ERCLIHKPEGAIFLWLWFKDLPI------TTELLYQRLKA-RGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP-EPDKIE 400 (417)
T ss_dssp TTCEEECCCBSSEEEEECTTCSS------CHHHHHHHHHH-TTEECEEGGGGCTTBSSCCGGGGGEEEEESCS-CHHHHH
T ss_pred CCceeeCCCcceEEEEEcCCCCC------CHHHHHHHHHH-CCEEEECchhhCCCCccccccCCCeEEEEecC-CHHHHH
Confidence 5788889999999999986 33 67889988865 899999999886432 5799999998 999999
Q ss_pred HHHHHHHHHHHHhhh
Q 042816 147 VVMERIRRISQTCKS 161 (163)
Q Consensus 147 ~~~~~l~~~~~~~~~ 161 (163)
+++++|.++++++..
T Consensus 401 ~~~~~l~~~l~~~~~ 415 (417)
T 3g7q_A 401 AGVKILAEEIERAWR 415 (417)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999987654
No 16
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.87 E-value=1.9e-21 Score=147.01 Aligned_cols=144 Identities=22% Similarity=0.315 Sum_probs=125.5
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSD-TKFVQKFININRERLRRLYVKFVAGLRQLGI 77 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 77 (163)
.||+||+|+||+++ ++++++.+...... +++|++.|.++..+|+. + ++++++.++.++++++++.+.|+++|+
T Consensus 223 ~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~ 298 (370)
T 2z61_A 223 LYAMTGWRIGYVIS-NDEIIEAILKLQQNLFISAPTISQYAALKAFEKET---EREINSMIKEFDRRRRLVLKYVKDFGW 298 (370)
T ss_dssp TTTCGGGCCEEEEC-CHHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHH---HHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccCCccceEEEEEE-CHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 37889999999999 89999999877663 57899999999999986 4 577899999999999999999998898
Q ss_pred ccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHH
Q 042816 78 ECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQ 157 (163)
Q Consensus 78 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~ 157 (163)
++.+|++|+|+|++++. +..++.+.|++++||.+.||+.|+..+++++||+++. +++++++++++|.++++
T Consensus 299 ~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~~-~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 299 EVNNPIGAYYVFPNIGE--------DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYAN-SYENIKEGLERIKEFLN 369 (370)
T ss_dssp BCCCCCBTTEECCBCSS--------CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECCS-CHHHHHHHHHHHHHHHC
T ss_pred eecCCCcceEEEEecCC--------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEeC-CHHHHHHHHHHHHHHHh
Confidence 88889999999999874 4578899888558999999998875347899999996 99999999999998874
No 17
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.86 E-value=1.7e-21 Score=148.57 Aligned_cols=151 Identities=12% Similarity=0.134 Sum_probs=127.2
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhccc---CCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhh-c-C
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLARFS---SVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQ-L-G 76 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~~~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~-g 76 (163)
||+||+|+||++++++++++.+......+ +++++.|.++..+|++. ++++++.++.++++++++.+.|++ + |
T Consensus 240 ~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 316 (399)
T 1c7n_A 240 FNIAGMGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKEC---GKWLDGCIKVIDKNQRIVKDFFEVNHPE 316 (399)
T ss_dssp HTCGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred ccccchheEEEEECCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 57899999999994478999888776643 67899999888888764 467889999999999999999998 6 8
Q ss_pred CccccCCceeEEEeecCCc-ccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHH
Q 042816 77 IECAKSNGGFYCWADMSGL-ISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRI 155 (163)
Q Consensus 77 ~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~ 155 (163)
+++.+|.+++++|++++.. . +..++++.|++++||.+.||..|+...++++||+++. +++++++++++|.++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~l~~~l~~l~~~ 389 (399)
T 1c7n_A 317 IKAPLIEGTYLQWIDFRALKM------DHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAA-PSSVIQESLERLNKA 389 (399)
T ss_dssp SBCCCCSBSSEEEEECGGGCC------CHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHH
T ss_pred CeEecCCceEEEEEEcccCCC------CHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEecc-CHHHHHHHHHHHHHH
Confidence 9999999999999999852 2 5678999887558999999998875457899999998 789999999999999
Q ss_pred HHHhhhc
Q 042816 156 SQTCKSH 162 (163)
Q Consensus 156 ~~~~~~~ 162 (163)
+++++.+
T Consensus 390 l~~~~~~ 396 (399)
T 1c7n_A 390 LKDLKNR 396 (399)
T ss_dssp HHHHC--
T ss_pred HHHHHhc
Confidence 9887654
No 18
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.86 E-value=3.4e-22 Score=152.75 Aligned_cols=146 Identities=19% Similarity=0.206 Sum_probs=117.7
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc--ccCCChHHHHHHHHhcCChHH-------HHHHHHHHHHHHHHHHHHHHHHh
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR--FSSVSAPSQNLLVSMLSDTKF-------VQKFININRERLRRLYVKFVAGL 72 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~-------~~~~~~~~~~~~~~~~~~l~~~l 72 (163)
||+||+|+||+++.++++++.+..... .++++.+.|.++..+|+++.. .+++++++++.|+++++.+.+.|
T Consensus 219 ~g~~GlRiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 298 (391)
T 3bwn_A 219 TGHAGSRIGWALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVV 298 (391)
T ss_dssp HSCGGGCEEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCccceEEEEecCHHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999999657899999988876 378999999999999987531 14678999999999999999999
Q ss_pred hhc-CCccccC-------------CceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEe
Q 042816 73 RQL-GIECAKS-------------NGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFT 138 (163)
Q Consensus 73 ~~~-g~~~~~~-------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~ 138 (163)
+++ |+++..| .+|+|+|++++. ...+.+ +++++||.+.||+.|+. +++++|||++
T Consensus 299 ~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~---------~~~~~~-~l~~~gV~v~pg~~fg~-~~~~iRis~~ 367 (391)
T 3bwn_A 299 KESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKE---------ETDLVS-ELRRHKVMSRAGERCGS-DKKHVRVSML 367 (391)
T ss_dssp HTCSSEECCCCCCEEETTTTEEECCCCSEEEEEESS---------SCCHHH-HHHHTTEECEEGGGGTC-CTTEEEEESC
T ss_pred HhCCCcccccCCccccccccccCCCcceEEEecCCc---------HHHHHH-HHHHCCEEEccCCCCCC-CCCEEEEEec
Confidence 988 6666543 456699999974 123344 45559999999999975 4689999999
Q ss_pred cCChhHHHHHHHHHHHHHHHh
Q 042816 139 LLTEKDIHVVMERIRRISQTC 159 (163)
Q Consensus 139 ~~~~~~l~~~~~~l~~~~~~~ 159 (163)
. +++++++++++|.+++++.
T Consensus 368 ~-~~e~i~~~~~~L~~~~~~~ 387 (391)
T 3bwn_A 368 S-REDVFNVFLERLANMKLIK 387 (391)
T ss_dssp S-CHHHHHHHHHHHHSCC---
T ss_pred C-CHHHHHHHHHHHHHHHHhh
Confidence 7 8899999999999877653
No 19
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.86 E-value=1.3e-20 Score=145.15 Aligned_cols=149 Identities=15% Similarity=0.094 Sum_probs=125.6
Q ss_pred CCCceeEEEEEecCHHHHHHHHHhhc--ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-----
Q 042816 3 SLPGFRISVIYSYNNSVLAAAKKLAR--FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL----- 75 (163)
Q Consensus 3 ~~~G~RiG~~i~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----- 75 (163)
++||+|+||+++ ++++++.+..... .++++++.|.++..++++...+++++++.++.|+++++.+.+.|.+.
T Consensus 262 ~~~G~r~G~~~~-~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~ 340 (427)
T 3ppl_A 262 TLAGAGVSFFLT-SAENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYG 340 (427)
T ss_dssp SCTTSSCEEEEC-CHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred cCcCccEEEEEc-CHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 689999999999 8999999988776 36789999999999999843337899999999999999999988663
Q ss_pred CCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcC-CCCCCC---CCCceEEEEEecCChhHHHHHHHH
Q 042816 76 GIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTP-GSSCHC---IEPGWFSFSFTLLTEKDIHVVMER 151 (163)
Q Consensus 76 g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~p-g~~f~~---~~~~~iRi~~~~~~~~~l~~~~~~ 151 (163)
++.+..|++|+|+|++++.. ++.++.+.|.+ +||.+.| |..|.. ..++++|||++..+.+++++++++
T Consensus 341 ~~~~~~p~~g~~~~~~~~~~-------~~~~~~~~l~~-~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~~~~~i~~~~~~ 412 (427)
T 3ppl_A 341 VAQWTVPAGGYFISLDVVPG-------TASRVAELAKE-AGIALTGAGSSYPLRQDPENKNLRLAPSLPPVEELEVAMDG 412 (427)
T ss_dssp CCEECCCSBSSCEEEECSTT-------CHHHHHHHHHH-TTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHH
T ss_pred ceEEeCCCccEEEEEECCcc-------hHHHHHHHHHH-CCCEEecCcCcCCCCCCCCCCeEEEECCCCCHHHHHHHHHH
Confidence 47788899999999999863 46778877665 8999999 666653 247899999987678999999999
Q ss_pred HHHHHHHhh
Q 042816 152 IRRISQTCK 160 (163)
Q Consensus 152 l~~~~~~~~ 160 (163)
|.+++++..
T Consensus 413 l~~~l~~~~ 421 (427)
T 3ppl_A 413 VATCVLLAA 421 (427)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999987653
No 20
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.86 E-value=1e-20 Score=145.71 Aligned_cols=148 Identities=14% Similarity=0.123 Sum_probs=122.8
Q ss_pred CCCceeEEEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHhhh----c
Q 042816 3 SLPGFRISVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSD-TKFVQKFININRERLRRLYVKFVAGLRQ----L 75 (163)
Q Consensus 3 ~~~G~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~ 75 (163)
++||+|+||+++ ++++++.+...... ++++.+.|.++..+|++ +.+ +++++++++.|+++++.+.+.|.+ +
T Consensus 260 ~~~GlriG~~~~-~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~l~~~ 337 (422)
T 3d6k_A 260 THAGSGVSFFAS-SKENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGL-KAHMLKHAASLAPKFERVLEILDSRLSEY 337 (422)
T ss_dssp SCTTSSCEEEEC-CHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred cCcccceEEEEe-CHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchH-HHHHHHHHHHHHHHHHHHHHHHHHhcCcC
Confidence 689999999999 89999999887764 67899999999999998 544 788999999999999999888875 3
Q ss_pred C-CccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcC-CCCCCC---CCCceEEEEEecCChhHHHHHHH
Q 042816 76 G-IECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTP-GSSCHC---IEPGWFSFSFTLLTEKDIHVVME 150 (163)
Q Consensus 76 g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~p-g~~f~~---~~~~~iRi~~~~~~~~~l~~~~~ 150 (163)
| +.+..|++|+|+|++++.. +...+.+.|. ++||.+.| |..|.. ..++++|||++..++++++++++
T Consensus 338 ~~~~~~~p~~g~~~~~~~~~~-------~~~~~~~~l~-~~gV~v~~~g~~f~~~~~~~~~~iRis~~~~~~e~i~~~~~ 409 (422)
T 3d6k_A 338 GVAKWTSPTGGYFISVDVVPG-------TASRVVELAK-EAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELEVAMD 409 (422)
T ss_dssp TCEEECCCSBSSCEEEEESTT-------CHHHHHHHHH-HTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHH
T ss_pred CceEEeCCCcceEEEEECCCC-------CHHHHHHHHH-HCCeEEEcCccccCCCCCCCCCeEEEecCCCCHHHHHHHHH
Confidence 3 6777889999999999852 3566766555 59999999 566742 13689999998448899999999
Q ss_pred HHHHHHHHhh
Q 042816 151 RIRRISQTCK 160 (163)
Q Consensus 151 ~l~~~~~~~~ 160 (163)
+|.++++++.
T Consensus 410 ~l~~~l~~~~ 419 (422)
T 3d6k_A 410 GFATCVLMAA 419 (422)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988764
No 21
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.86 E-value=1.4e-20 Score=143.64 Aligned_cols=149 Identities=17% Similarity=0.268 Sum_probs=127.5
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc---
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL--- 75 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--- 75 (163)
.|| ||+|+||+++ ++++++.+...... ++++.+.|.++..+|++..+ +++++.++.++++++.+.+.|++.
T Consensus 239 ~~~-~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~ 314 (397)
T 2zyj_A 239 VLS-PGLRVAFAVA-HPEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFS--ERLERVRRVYREKAQAMLHALDREVPK 314 (397)
T ss_dssp TTC-GGGCCEEEEC-CHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHH--HHHHHHHHHHHHHHHHHHHHHHHHSCT
T ss_pred ccc-ccceeEEEec-CHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 367 9999999999 89999998876653 56799999999999998743 778999999999999999999885
Q ss_pred CCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCC--CCceEEEEEecCChhHHHHHHHHHH
Q 042816 76 GIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCI--EPGWFSFSFTLLTEKDIHVVMERIR 153 (163)
Q Consensus 76 g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~--~~~~iRi~~~~~~~~~l~~~~~~l~ 153 (163)
|+++..|.+|+|+|++++... ++.++++.|.+ +||.+.||..|+.. .++++||+++..+++++++++++|.
T Consensus 315 g~~~~~~~~g~~~~~~~~~~~------~~~~~~~~l~~-~gi~v~~g~~f~~~~~~~~~iRis~~~~~~~~i~~~~~~l~ 387 (397)
T 2zyj_A 315 EVRYTRPKGGMFVWMELPKGL------SAEGLFRRALE-ENVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRLG 387 (397)
T ss_dssp TSEECCCSBSSEEEEECSTTC------CHHHHHHHHHH-TTEEEEESGGGCTTSCCTTEEEEECSSSCHHHHHHHHHHHH
T ss_pred CeEEccCCccEEEEEEcCCCC------CHHHHHHHHHH-CCCEEechHHhcCCCCCCCeEEEEcCCCCHHHHHHHHHHHH
Confidence 688888899999999998543 67889999887 69999999988642 3689999998756899999999999
Q ss_pred HHHHHhh
Q 042816 154 RISQTCK 160 (163)
Q Consensus 154 ~~~~~~~ 160 (163)
++++++.
T Consensus 388 ~~l~~~~ 394 (397)
T 2zyj_A 388 RALKGLL 394 (397)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9987654
No 22
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.86 E-value=4.2e-21 Score=146.10 Aligned_cols=148 Identities=14% Similarity=0.181 Sum_probs=125.6
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc----ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhh-c-
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR----FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQ-L- 75 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~----~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~- 75 (163)
||+||+|+||++++++++++.+..... +++++.+.|.++..++++. ++++++.++.++++++.+.+.|++ +
T Consensus 235 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~ 311 (390)
T 1d2f_A 235 FNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQG---APWLDALRIYLKDNLTYIADKMNAAFP 311 (390)
T ss_dssp HTCGGGCCEEEEECSHHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred hcccChhheEEEECCHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 578999999999944889888877654 2478899998888888754 567889999999999999999998 5
Q ss_pred CCccccCCceeEEEeecCCc-ccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHH
Q 042816 76 GIECAKSNGGFYCWADMSGL-ISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRR 154 (163)
Q Consensus 76 g~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~ 154 (163)
|+++.+|++++++|++++.. . ++.++++.|++++||.+.||..|+...++++||+++. +++++++++++|.+
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~ 384 (390)
T 1d2f_A 312 ELNWQIPQSTYLAWLDLRPLNI------DDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC-PRSKLEKGVAGLIN 384 (390)
T ss_dssp SCCCCCCSBCSEEEEECGGGCC------CHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHH
T ss_pred CCEEecCCccEEEEEEccccCC------CHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC-CHHHHHHHHHHHHH
Confidence 89999999999999999853 2 5678999888558999999998874447899999998 78999999999999
Q ss_pred HHHHh
Q 042816 155 ISQTC 159 (163)
Q Consensus 155 ~~~~~ 159 (163)
+++++
T Consensus 385 ~l~~~ 389 (390)
T 1d2f_A 385 AIRAV 389 (390)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 98765
No 23
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.86 E-value=5.2e-21 Score=150.51 Aligned_cols=157 Identities=17% Similarity=0.169 Sum_probs=126.4
Q ss_pred C-CCCceeEEEEEec--CHHHHHHHHHhhc-ccCCChHHHHHHHHhcCChH--------HHHHHHHHHHHHHHHHHHHHH
Q 042816 2 L-SLPGFRISVIYSY--NNSVLAAAKKLAR-FSSVSAPSQNLLVSMLSDTK--------FVQKFININRERLRRLYVKFV 69 (163)
Q Consensus 2 ~-~~~G~RiG~~i~~--~~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~--------~~~~~~~~~~~~~~~~~~~l~ 69 (163)
| |+||+|+||+++. ++++++.+.+... .++++.+.|.++..++++++ + .+++++.++.++++++++.
T Consensus 319 ~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~l~ 397 (500)
T 3tcm_A 319 YYGECGKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNPPKASDESYASY-KAEKDGILASLARRAKALE 397 (500)
T ss_dssp TTCCGGGCCEEEEEESCCTTHHHHHHHHHHTTCCCCHHHHHHHHHHHSCCCSSSTHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCccceEEEEEeCCCHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccccchhHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 5 8899999999973 6789898887766 47889999999999997532 3 5777889999999999999
Q ss_pred HHhhhc-CCccccCCceeEEEeec--CCcc----cCCChhhHHHHHHHHHHhcCeEEcCCCCCCC-CCCceEEEEEecCC
Q 042816 70 AGLRQL-GIECAKSNGGFYCWADM--SGLI----SSYSEKGELELWDKLLNVAKVNVTPGSSCHC-IEPGWFSFSFTLLT 141 (163)
Q Consensus 70 ~~l~~~-g~~~~~~~~g~~~~~~~--~~~~----~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~-~~~~~iRi~~~~~~ 141 (163)
+.|+++ |+++.+|++|+|+|+++ |... ...+..++..++..+++++||.+.||+.|+. .+++++|++++ ++
T Consensus 398 ~~L~~~~g~~~~~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~-~~ 476 (500)
T 3tcm_A 398 HAFNKLEGITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL-PQ 476 (500)
T ss_dssp HHHHTSTTEECCCCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC-SC
T ss_pred HHHhcCCCcEEecCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC-CC
Confidence 999999 99999999999999655 3211 0001113455566777778999999999985 45789999999 49
Q ss_pred hhHHHHHHHHHHHHHHHhh
Q 042816 142 EKDIHVVMERIRRISQTCK 160 (163)
Q Consensus 142 ~~~l~~~~~~l~~~~~~~~ 160 (163)
.+++++++++|.++++++.
T Consensus 477 ~e~i~~~i~~l~~~~~~~~ 495 (500)
T 3tcm_A 477 EDKIPAVISRFTVFHEAFM 495 (500)
T ss_dssp TTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999987764
No 24
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.86 E-value=4e-21 Score=145.59 Aligned_cols=142 Identities=16% Similarity=0.267 Sum_probs=123.5
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIEC 79 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~ 79 (163)
||+||+|+||+++ ++++++.+...... .+++.+.|.++..+|++. ++++++.++.++++++.+.+.|+++ +++
T Consensus 232 ~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~-~~~ 306 (376)
T 2dou_A 232 YNLAGFRLGFALG-SEEALARLERVKGVIDFNQYAGVLRMGVEALKTP---KEVVRGYARVYRERALGMAEALKGV-LSL 306 (376)
T ss_dssp HTCGGGCCEEEEE-CHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHTSC---HHHHHHHHHHHHHHHHHHHHHHTTT-SEE
T ss_pred cCChhheeEEEec-CHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHh-cCc
Confidence 5789999999999 99999999877663 468899999999999885 5778999999999999999999988 888
Q ss_pred ccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHH
Q 042816 80 AKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRIS 156 (163)
Q Consensus 80 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~ 156 (163)
.+|++|+|+|++++... ++.++++.|++ +||.+.||+.|+...++++||+++. +++++++++++|.+++
T Consensus 307 ~~~~~~~~~~~~~~~~~------~~~~~~~~l~~-~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 307 LPPRATMYLWGRLPEGV------DDLEFGLRLVE-RGVALAPGRGFGPGGKGFVRIALVR-PLEELLEAAKRIREAL 375 (376)
T ss_dssp CCCCBSSEEEEECCTTC------CHHHHHHHHHH-TTEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHTC
T ss_pred cCCCeeEEEEEECCCCC------CHHHHHHHHHH-CCEEEcCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHh
Confidence 88899999999998543 56789999987 6999999998875457899999997 8899999999998754
No 25
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.86 E-value=9e-21 Score=143.56 Aligned_cols=146 Identities=16% Similarity=0.185 Sum_probs=127.0
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhcc---cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc--C
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLARF---SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL--G 76 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--g 76 (163)
||++|+|+||++++++++++.+...... .+++.+.|.++..++++. ++++++.++.++++++.+.+.|++. |
T Consensus 232 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 308 (383)
T 3kax_A 232 FNIAGLQASIIIIPNEKLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTEC---NDWLNEIRFYIEDNAKFACEYIKDHIPT 308 (383)
T ss_dssp HTCGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTTC---HHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred ccCcchhheEEEeCCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 6789999999998568899988877653 478999999999999885 5778999999999999999999984 8
Q ss_pred CccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHH
Q 042816 77 IECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRIS 156 (163)
Q Consensus 77 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~ 156 (163)
+++.+|++++++|++++... .+..++++.|++++||.+.||+.|+..+++++||+++. +++++++++++|.+++
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 309 LSVMKPEGSFLLWIDCSALN-----LSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIGC-PRSVLEEILNRLRHTF 382 (383)
T ss_dssp CEECCCSBSSEEEEECGGGC-----CCHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECSS-CHHHHHHHHHHHHHHH
T ss_pred ceEecCCceEEEEEEccccC-----CCHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEcC-CHHHHHHHHHHHHHHh
Confidence 99999999999999998521 16789999998668999999999987668999999997 8999999999998875
No 26
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.86 E-value=1.4e-21 Score=150.53 Aligned_cols=153 Identities=16% Similarity=0.245 Sum_probs=125.6
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc--ccCCChHHHHHHHHhcCC-----hHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR--FSSVSAPSQNLLVSMLSD-----TKFVQKFININRERLRRLYVKFVAGLRQ 74 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 74 (163)
||+||+|+||+++ ++++++.+..... .++++++.|.++..+|++ ..+ ++++++.++.++++++++.+.|++
T Consensus 257 ~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~ 334 (429)
T 1yiz_A 257 FSLTGWKIGWAYG-PEALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSP-ECYFNSISGELMAKRDYMASFLAE 334 (429)
T ss_dssp HTCGGGCCEEEES-CHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTST-TSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcceEEEEe-CHHHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccch-HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6789999999999 8999999887654 367899999999888876 432 467889999999999999999998
Q ss_pred cCCccccCCceeEEEeecCCccc------CCChhhHHHHHHHHHHhcCeEEcCCCCCCCC-----CCceEEEEEecCChh
Q 042816 75 LGIECAKSNGGFYCWADMSGLIS------SYSEKGELELWDKLLNVAKVNVTPGSSCHCI-----EPGWFSFSFTLLTEK 143 (163)
Q Consensus 75 ~g~~~~~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~-----~~~~iRi~~~~~~~~ 143 (163)
+|+.+..|++|+|+|++++.... ..+..++.++++.|++++||.+.||+.|+.. +++++||+++. +++
T Consensus 335 ~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~-~~e 413 (429)
T 1yiz_A 335 VGMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFK-KDE 413 (429)
T ss_dssp HTCEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECCS-CHH
T ss_pred CCCcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEecC-CHH
Confidence 89998889999999999985310 0000256789988886689999999888632 26899999997 999
Q ss_pred HHHHHHHHHHHHHH
Q 042816 144 DIHVVMERIRRISQ 157 (163)
Q Consensus 144 ~l~~~~~~l~~~~~ 157 (163)
++++++++|.++++
T Consensus 414 ~i~~~l~~l~~~l~ 427 (429)
T 1yiz_A 414 NLQKAAEILRKWKG 427 (429)
T ss_dssp HHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999998764
No 27
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.86 E-value=3.1e-21 Score=148.61 Aligned_cols=151 Identities=19% Similarity=0.316 Sum_probs=127.7
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc---
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL--- 75 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--- 75 (163)
.|| ||+|+||+++ ++++++.+...... +++|++.|.++..+|++..+ ++++++.++.++++++.+.+.|++.
T Consensus 261 ~~~-~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 337 (425)
T 1vp4_A 261 VLA-PGLRIGMVAG-SKEFIRKIVQAKQSADLCSPAITHRLAARYLERYDL-LEQLKPTIELYRRKRTVMLNALEEYFSD 337 (425)
T ss_dssp TTC-GGGCEEEEEC-CHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCH-HHHTHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred ccc-cccceEEEee-CHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCH-HHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 378 9999999999 89999998876653 57899999999999986543 6788999999999999999999886
Q ss_pred --CCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCC--CCceEEEEEecCChhHHHHHHHH
Q 042816 76 --GIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCI--EPGWFSFSFTLLTEKDIHVVMER 151 (163)
Q Consensus 76 --g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~--~~~~iRi~~~~~~~~~l~~~~~~ 151 (163)
|+++..|.+|+|+|++++... ++.++++.|++ +||.+.||+.|+.. .++++||+++..+++++++++++
T Consensus 338 ~~g~~~~~~~~g~~~~~~~~~~~------~~~~l~~~l~~-~gi~v~~g~~f~~~~~~~~~iRis~~~~~~e~i~~~l~~ 410 (425)
T 1vp4_A 338 IPGVKWVKSEGGLFIWLTLPEGF------DTWEMFEYAKR-KKVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKR 410 (425)
T ss_dssp STTCEECCCSBSSEEEEECCTTC------CTTTTHHHHHH-HTEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHH
T ss_pred CCceEEecCCccEEEEEEcCCCC------CHHHHHHHHHH-CCCEEECchhhcCCCCCCCeEEEEeCCCCHHHHHHHHHH
Confidence 688888899999999998533 45778888887 59999999988642 36899999987568999999999
Q ss_pred HHHHHHHhhh
Q 042816 152 IRRISQTCKS 161 (163)
Q Consensus 152 l~~~~~~~~~ 161 (163)
|.++++++..
T Consensus 411 l~~~l~~~~~ 420 (425)
T 1vp4_A 411 LREVVLEYGK 420 (425)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999877653
No 28
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.86 E-value=7.6e-21 Score=144.76 Aligned_cols=142 Identities=18% Similarity=0.298 Sum_probs=123.6
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIE 78 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 78 (163)
.||+||+|+||+++ ++++++.+...... ++++.+.|.++..++++. +++++.++.++++++.+.+.|++. +.
T Consensus 246 ~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~l~~~l~~~-~~ 319 (396)
T 3jtx_A 246 RSNVPGLRSGFVAG-DAELLKNFLLYRTYHGSAMSIPVQRASIAAWDDE----QHVIDNRRLYQEKFERVIPILQQV-FD 319 (396)
T ss_dssp TSSCGGGCCEEEEE-CHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHTTT-SC
T ss_pred ccCCcccceEEEEe-CHHHHHHHHHHHhhcccCCCHHHHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 37999999999999 99999999887663 678999999999999864 668899999999999999999887 56
Q ss_pred cccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCC------CCCceEEEEEecCChhHHHHHHHHH
Q 042816 79 CAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHC------IEPGWFSFSFTLLTEKDIHVVMERI 152 (163)
Q Consensus 79 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~------~~~~~iRi~~~~~~~~~l~~~~~~l 152 (163)
+..|++|+|+|++++.. ++.++++.|++++||.+.||+.|+. ..++++||+++. +++++++++++|
T Consensus 320 ~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l 391 (396)
T 3jtx_A 320 VKLPDASFYIWLKVPDG-------DDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA-DVATCVKAAEDI 391 (396)
T ss_dssp CCCCSSSSEEEEECTTS-------CHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS-CHHHHHHHHHHH
T ss_pred ccCCCeeEEEEEECCCC-------CHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC-CHHHHHHHHHHH
Confidence 77889999999999862 6788999898768999999998875 246899999998 999999999999
Q ss_pred HHHH
Q 042816 153 RRIS 156 (163)
Q Consensus 153 ~~~~ 156 (163)
.+++
T Consensus 392 ~~~l 395 (396)
T 3jtx_A 392 VSLY 395 (396)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 8764
No 29
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.85 E-value=1.1e-20 Score=143.75 Aligned_cols=149 Identities=21% Similarity=0.308 Sum_probs=126.9
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIE 78 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 78 (163)
.||++|+|+||+++ ++++++.+.+.... .+++.+.|.++..++.. .+++++.++.++++++.+.+.|+++++.
T Consensus 231 ~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 305 (391)
T 3h14_A 231 YFSMTGWRVGWMVV-PEDQVRVVERIAQNMFICAPHASQVAALAALDC----DAELQANLDVYKANRKLMLERLPKAGFT 305 (391)
T ss_dssp TTCCTTSCCEEEEC-CGGGHHHHHHHHHHTTCCCCHHHHHHHHHHTTC----HHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred ccCCccceeEEEEe-CHHHHHHHHHHHhhhccCCCHHHHHHHHHHhCC----hHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 37899999999999 88999998877663 57889999999888883 5778999999999999999999998654
Q ss_pred -cccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCC-CCCceEEEEEecCChhHHHHHHHHHHHHH
Q 042816 79 -CAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHC-IEPGWFSFSFTLLTEKDIHVVMERIRRIS 156 (163)
Q Consensus 79 -~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~-~~~~~iRi~~~~~~~~~l~~~~~~l~~~~ 156 (163)
+.+|++++++|++++... .+..++++.|++++||.+.||+.|+. ..++++||+++. +++++++++++|.+++
T Consensus 306 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~~ 379 (391)
T 3h14_A 306 RIAPPDGAFYVYADVSDLT-----DDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR-ATADIEEGLDRLEAFM 379 (391)
T ss_dssp CBCCCCBTTEEEEECTTTC-----SCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS-CHHHHHHHHHHHHHHH
T ss_pred cccCCCeeEEEEEecCccC-----CCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHH
Confidence 468899999999997521 26789999988867999999999986 347899999998 8899999999999998
Q ss_pred HHhh
Q 042816 157 QTCK 160 (163)
Q Consensus 157 ~~~~ 160 (163)
++..
T Consensus 380 ~~~~ 383 (391)
T 3h14_A 380 QARG 383 (391)
T ss_dssp HHC-
T ss_pred HHhc
Confidence 7654
No 30
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.85 E-value=3e-21 Score=148.03 Aligned_cols=151 Identities=18% Similarity=0.243 Sum_probs=124.4
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc--ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR--FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIEC 79 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~ 79 (163)
||+||+|+||+++ ++++++.+..... .++++++.|.++..+|+.. ++++++.++.++++++++.+.|++.|+++
T Consensus 235 ~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 310 (411)
T 2o0r_A 235 FNCTGWKIGWACG-PAELIAGVRAAKQYLSYVGGAPFQPAVALALDTE---DAWVAALRNSLRARRDRLAAGLTEIGFAV 310 (411)
T ss_dssp TTCTTTCEEEEEC-CHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHTCEE
T ss_pred cCCccceEEEEee-CHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHHHcCCEe
Confidence 6899999999999 8999998887765 3677889999888888754 57788999999999999999999889998
Q ss_pred ccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCC-C----------CCceEEEEEecCChhHHHHH
Q 042816 80 AKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHC-I----------EPGWFSFSFTLLTEKDIHVV 148 (163)
Q Consensus 80 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~-~----------~~~~iRi~~~~~~~~~l~~~ 148 (163)
..|++|+|+|++++... + .++.++++.|++++||.+.||..|.. . +++++||+++. ++++++++
T Consensus 311 ~~~~~g~~~~~~~~~~~---~-~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~-~~e~i~~~ 385 (411)
T 2o0r_A 311 HDSYGTYFLCADPRPLG---Y-DDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCK-RDDTLDEA 385 (411)
T ss_dssp CCCCBSSEEEEECGGGT---C-CCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECCS-CHHHHHHH
T ss_pred cCCCeeEEEEEecCCCC---C-CCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEecC-CHHHHHHH
Confidence 88999999999997520 0 15678998888668999999988842 2 36899999987 88999999
Q ss_pred HHHHHHHHHHhhh
Q 042816 149 MERIRRISQTCKS 161 (163)
Q Consensus 149 ~~~l~~~~~~~~~ 161 (163)
+++|.+++++.+.
T Consensus 386 ~~~l~~~~~~~~~ 398 (411)
T 2o0r_A 386 IRRLSVLAERPAT 398 (411)
T ss_dssp HHHHGGGGC----
T ss_pred HHHHHHHHhccCc
Confidence 9999988766544
No 31
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.85 E-value=2.1e-21 Score=146.90 Aligned_cols=149 Identities=13% Similarity=0.155 Sum_probs=127.8
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc--C
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL--G 76 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--g 76 (163)
.||++|+|+||+++.++++++.+...... .+++++.|.++..++++. ++++++.++.++++++++.+.|++. |
T Consensus 224 ~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 300 (377)
T 3fdb_A 224 AWNIAGLKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRYG---TDFLNQEVAYLKNNHDFLLHEIPKRIPG 300 (377)
T ss_dssp TTTCGGGCCEEEECCSHHHHHHHHHSCHHHHCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred hccCcchhheEEEeCCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 37899999999887678999999887653 678999999988888865 5778999999999999999999995 8
Q ss_pred CccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHH
Q 042816 77 IECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRIS 156 (163)
Q Consensus 77 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~ 156 (163)
+++..|++++++|++++... .+.++++.|++++||.+.||+.|+...++++||+++. +++++++++++|.+++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~-~~e~i~~~l~~l~~~l 373 (377)
T 3fdb_A 301 AKITPMQATYLMWIDFRDTT------IEGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFAT-SREVLEEAIDRMAKAV 373 (377)
T ss_dssp CEECCCSBCSEEEEECTTSC------CCSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHH
T ss_pred ceEecCCeeEEEEEECcccC------CCHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCC-CHHHHHHHHHHHHHHH
Confidence 99999999999999998631 1256778888867999999999986667999999997 9999999999999988
Q ss_pred HHh
Q 042816 157 QTC 159 (163)
Q Consensus 157 ~~~ 159 (163)
+++
T Consensus 374 ~~~ 376 (377)
T 3fdb_A 374 SHH 376 (377)
T ss_dssp TTC
T ss_pred hhc
Confidence 653
No 32
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.85 E-value=3.4e-21 Score=147.89 Aligned_cols=154 Identities=12% Similarity=0.217 Sum_probs=126.6
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc--ccCCChHHHHHHHHhcCC-----hHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR--FSSVSAPSQNLLVSMLSD-----TKFVQKFININRERLRRLYVKFVAGLRQ 74 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 74 (163)
||+||+|+||+++ ++++++.+..... .++++++.|.++..++++ ..+ ++++++.++.++++++.+.+.|++
T Consensus 249 ~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~ 326 (422)
T 3fvs_A 249 FSATGWKVGWVLG-PDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQP-SSYFVQFPQAMQRCRDHMIRSLQS 326 (422)
T ss_dssp HTCGGGCCEEEEC-CHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCT-TCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCccceEEEEEe-CHHHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccch-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6889999999999 9999999887765 467899999999988864 112 567889999999999999999999
Q ss_pred cCCccccCCceeEEEeecCCccc-CC------ChhhHHHHHHHHHHhcCeEEcCCCCCCC-----CCCceEEEEEecCCh
Q 042816 75 LGIECAKSNGGFYCWADMSGLIS-SY------SEKGELELWDKLLNVAKVNVTPGSSCHC-----IEPGWFSFSFTLLTE 142 (163)
Q Consensus 75 ~g~~~~~~~~g~~~~~~~~~~~~-~~------~~~~~~~~~~~l~~~~gi~v~pg~~f~~-----~~~~~iRi~~~~~~~ 142 (163)
+|+.+..|++|+|+|++++.... .. ....+.+++..+++++||.+.||+.|+. .+++++|||++. ++
T Consensus 327 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~-~~ 405 (422)
T 3fvs_A 327 VGLKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVK-DE 405 (422)
T ss_dssp TTCEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCC-CH
T ss_pred cCCeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEecC-CH
Confidence 99998999999999999875210 00 0001568888888878999999998863 347899999998 99
Q ss_pred hHHHHHHHHHHHHHHH
Q 042816 143 KDIHVVMERIRRISQT 158 (163)
Q Consensus 143 ~~l~~~~~~l~~~~~~ 158 (163)
+++++++++|.+++++
T Consensus 406 e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 406 ATLQAMDEKLRKWKVE 421 (422)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998764
No 33
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.85 E-value=7.4e-21 Score=144.41 Aligned_cols=150 Identities=11% Similarity=0.152 Sum_probs=129.5
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc---ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhh-c-C
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR---FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQ-L-G 76 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~---~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~-g 76 (163)
||++|+|+||++++++++++.+..... .++++++.|.++..++.+. ++++++.++.++++++++.+.|++ + |
T Consensus 236 ~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 312 (391)
T 3dzz_A 236 FNLAALHAACAIIPNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEG---HDWLRELKQVLRDNFAYAREFLAKEVPE 312 (391)
T ss_dssp HTCTTTCCEEEECCSHHHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred ccccchhheEEEECCHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 578999999999944999999887754 3578999999888888764 577899999999999999999999 4 8
Q ss_pred CccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHH
Q 042816 77 IECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRIS 156 (163)
Q Consensus 77 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~ 156 (163)
+++..|.+++++|++++... .+..++++.|++++||.+.||+.|+..+++++||+++. +++++++++++|.+++
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~l 386 (391)
T 3dzz_A 313 VKVLDSNASYLAWVDISALG-----MNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLAC-PKELVIDGMQRLKQGV 386 (391)
T ss_dssp SEECCCCBSSEEEEECGGGC-----SCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECCS-CHHHHHHHHHHHHHHH
T ss_pred cEEeccCceEEEEEehhhcC-----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHH
Confidence 99999999999999998521 16789999997558999999999987667999999996 9999999999999999
Q ss_pred HHhh
Q 042816 157 QTCK 160 (163)
Q Consensus 157 ~~~~ 160 (163)
++++
T Consensus 387 ~~~~ 390 (391)
T 3dzz_A 387 LNLN 390 (391)
T ss_dssp HTCC
T ss_pred HHhh
Confidence 8764
No 34
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.85 E-value=6.8e-21 Score=146.94 Aligned_cols=155 Identities=17% Similarity=0.237 Sum_probs=128.2
Q ss_pred CCCCCceeEEEEEecC------HHHHHHHHHhhc-ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042816 1 DLSLPGFRISVIYSYN------NSVLAAAKKLAR-FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLR 73 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~------~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 73 (163)
.|++||+|+||+++++ +++++.+..... .++++++.|.++..+|++.. .+++++.++.++++++.+.+.|+
T Consensus 264 ~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~a~~~~L~~~~--~~~~~~~~~~~~~~~~~l~~~L~ 341 (427)
T 3dyd_A 264 RWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQRILGPCTIVQGALKSILCRTP--GEFYHNTLSFLKSNADLCYGALA 341 (427)
T ss_dssp TSSCGGGCCEEEEEECSTTSSHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHSC--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcCcceEEEEecCcchhhHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHh
Confidence 3799999999999943 578888877654 47899999999999998422 46778899999999999999999
Q ss_pred hc-CCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHH
Q 042816 74 QL-GIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERI 152 (163)
Q Consensus 74 ~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l 152 (163)
++ |+++..|++|+|+|++++...- +...++.++++.|++++||.+.||..|+. ++++||+++. +++++++++++|
T Consensus 342 ~~~g~~~~~p~~g~~~~~~l~~~~~-~~~~~~~~~~~~l~~~~gV~v~~g~~~~~--~~~iRis~~~-~~e~i~~~l~~l 417 (427)
T 3dyd_A 342 AIPGLRPVRPSGAMYLMVGIEMEHF-PEFENDVEFTERLVAEQSVHCLPATCFEY--PNFIRVVITV-PEVMMLEACSRI 417 (427)
T ss_dssp HSTTEEEECCSBTTEEEEEECGGGC-TTCSSHHHHHHHHHHHHCEECEEGGGGTC--TTEEEEESCS-CHHHHHHHHHHH
T ss_pred cCCCceecCCCeeEEEEEecCHhhc-CCCCCHHHHHHHHHHHCCEEEECCcccCC--CCeEEEEECC-CHHHHHHHHHHH
Confidence 98 8998889999999998873200 00125788999888669999999998875 6899999986 999999999999
Q ss_pred HHHHHHhhh
Q 042816 153 RRISQTCKS 161 (163)
Q Consensus 153 ~~~~~~~~~ 161 (163)
.++++++++
T Consensus 418 ~~~l~~~~~ 426 (427)
T 3dyd_A 418 QEFCEQHYH 426 (427)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHhhc
Confidence 999988753
No 35
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.85 E-value=3.2e-20 Score=142.45 Aligned_cols=144 Identities=12% Similarity=0.160 Sum_probs=121.3
Q ss_pred CCCCCceeEEEEEe--cCHHHHHHHHHhhcc------cCCChHHHHHHHHhcCChHHH---HHHHHHHHHHHHHHHHHHH
Q 042816 1 DLSLPGFRISVIYS--YNNSVLAAAKKLARF------SSVSAPSQNLLVSMLSDTKFV---QKFININRERLRRLYVKFV 69 (163)
Q Consensus 1 ~~~~~G~RiG~~i~--~~~~~~~~~~~~~~~------~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~l~ 69 (163)
+||+||+|+||+++ .++++++.+...... .+++.+.|.++..++++..+. .++++++++.++++++++.
T Consensus 263 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 342 (418)
T 3rq1_A 263 GFTMYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFK 342 (418)
T ss_dssp TTTCCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47999999999988 378999988776542 358899999999999987421 4556678899999999999
Q ss_pred HHhhhcCCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHH
Q 042816 70 AGLRQLGIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVM 149 (163)
Q Consensus 70 ~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~ 149 (163)
+.|+++|+++.+|++|||+|++++ ++.++++.|. ++||.+.|| ++++|||++.++++++++++
T Consensus 343 ~~L~~~g~~~~~~~~~~~~~~~~~---------~~~~~~~~l~-~~gi~v~~g-------~~~iRis~~~~~~~~i~~~~ 405 (418)
T 3rq1_A 343 QEAAQVGLPMLPYRGGFFITIPTD---------SANAICEELK-KEHIYVIAL-------ANGIRIAACGIPKCQMTGLA 405 (418)
T ss_dssp HHHHHHTCCCCCCCSSSEEEEECT---------THHHHHHHHH-HTTEECEEC-------SSEEEEEGGGSCHHHHTTHH
T ss_pred HHHHhcCCCCCCCCceEEEEcCCC---------CHHHHHHHHH-hCCEEEecC-------CCCeEEEEecCCHHHHHHHH
Confidence 999998999999999999999875 5678888765 489999997 36899999866999999999
Q ss_pred HHHHHHHHHhhh
Q 042816 150 ERIRRISQTCKS 161 (163)
Q Consensus 150 ~~l~~~~~~~~~ 161 (163)
++|.++++++.+
T Consensus 406 ~~l~~~l~~~~~ 417 (418)
T 3rq1_A 406 EKIYNAMKSLGK 417 (418)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHHhc
Confidence 999999987753
No 36
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.85 E-value=6.3e-21 Score=144.95 Aligned_cols=144 Identities=19% Similarity=0.253 Sum_probs=122.0
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc--ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR--FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIEC 79 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~ 79 (163)
||+||+|+||+++ ++++++.+..... .++++.+.|.++..+|++. ++++++.++.++++++++.+.|+++|+++
T Consensus 238 ~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 313 (386)
T 1u08_A 238 YHMTGWKVGYCVA-PAPISAEIRKVHQYLTFSVNTPAQLALADMLRAE---PEHYLALPDFYRQKRDILVNALNESRLEI 313 (386)
T ss_dssp TTCGGGCCEEEEC-CHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHC---THHHHTHHHHHHHHHHHHHHHTTSSSCEE
T ss_pred cCCcccceEEEEc-CHHHHHHHHHHHHhhccCCChHHHHHHHHHHhCC---cHHHHHHHHHHHHHHHHHHHHHHHCCCee
Confidence 6889999999999 8999999887765 3678899999999888764 46788999999999999999999889998
Q ss_pred ccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCC--CCCceEEEEEecCChhHHHHHHHHHHH
Q 042816 80 AKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHC--IEPGWFSFSFTLLTEKDIHVVMERIRR 154 (163)
Q Consensus 80 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~--~~~~~iRi~~~~~~~~~l~~~~~~l~~ 154 (163)
..|++|+|+|++++... ..++.++++.|++++||.+.||..|.. ..++++||+++. +++++++++++|.+
T Consensus 314 ~~~~~g~~~~~~~~~~~----~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 314 LPCEGTYFLLVDYSAVS----TLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAK-KESTLLAAAERLRQ 385 (386)
T ss_dssp CCCCBSSEEEEECTTTC----CSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCS-CHHHHHHHHHHHTT
T ss_pred cCCCceEEEEEecCCCC----CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcC-CHHHHHHHHHHHhh
Confidence 88999999999998530 015688998888668999999988864 247899999997 88999999998864
No 37
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.85 E-value=2.4e-20 Score=143.73 Aligned_cols=144 Identities=17% Similarity=0.203 Sum_probs=123.5
Q ss_pred CCCCceeEEEEEe--cCHHHHHHHHHhhcc------cCCChHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHHHHHh
Q 042816 2 LSLPGFRISVIYS--YNNSVLAAAKKLARF------SSVSAPSQNLLVSMLS-DTKFVQKFININRERLRRLYVKFVAGL 72 (163)
Q Consensus 2 ~~~~G~RiG~~i~--~~~~~~~~~~~~~~~------~~~s~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~l~~~l 72 (163)
||+||+|+||+++ +++++++.+...... +++|.+.|.++..+|+ ++.+ .+++++.++.++++++.+.+.|
T Consensus 273 ~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~~~l~~~L 351 (430)
T 2x5f_A 273 FFAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQF-DKEIEQNIQTLKERYEVTKEVV 351 (430)
T ss_dssp TTCGGGCCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCeEEEEEecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999998 468888888776543 5789999999999999 8755 5667779999999999999999
Q ss_pred h----hcCCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHH
Q 042816 73 R----QLGIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVV 148 (163)
Q Consensus 73 ~----~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~ 148 (163)
+ +.|+++.+|++|+|+|++++ .. ++.++++.|++++||.+.|| .++++||+++..++++++++
T Consensus 352 ~~~~~~~g~~~~~~~~g~~~~~~~~-~~------~~~~~~~~l~~~~gi~v~~g------~~~~iRis~~~~~~e~i~~~ 418 (430)
T 2x5f_A 352 YADQYHSHWQAYDFNSGYFMAIKVH-DV------DPEALRKHLIDKYSIGVIAL------NATDIRIAFSCVEKDDIPHV 418 (430)
T ss_dssp TCGGGTTTEEECCCCBSSEEEEEES-SS------CHHHHHHHHHHHHCEECEEC------SSSEEEEEGGGSCGGGHHHH
T ss_pred HhhCCCCCceeeCCCceEEEEeCCC-CC------CHHHHHHHHHHhCCEEEecC------CCCeEEEEEecCCHHHHHHH
Confidence 8 56888889999999999998 32 67889998886589999998 36899999994488999999
Q ss_pred HHHHHHHHHHh
Q 042816 149 MERIRRISQTC 159 (163)
Q Consensus 149 ~~~l~~~~~~~ 159 (163)
+++|.++++++
T Consensus 419 ~~~l~~~l~~~ 429 (430)
T 2x5f_A 419 FDSIAKAIDDL 429 (430)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 99999998775
No 38
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.85 E-value=1.4e-20 Score=142.98 Aligned_cols=147 Identities=19% Similarity=0.370 Sum_probs=125.7
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CC
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL-GI 77 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~ 77 (163)
.||+||+|+||+++ ++++++.+...... ++++.+.|.++..+|+.. ++++++.++.++++++++.+.|+++ |+
T Consensus 238 ~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 313 (388)
T 1j32_A 238 TYAMTGWRVGFLAG-PVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENS---QDCVQEMLAAFAERRRYMLDALNAMPGL 313 (388)
T ss_dssp TTTCTTTCCEEEEC-CHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSC---SHHHHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred ccCCcccceEEEEe-CHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCC---cHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 37899999999999 89999988876653 678899999888888754 4678889999999999999999998 89
Q ss_pred ccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHH
Q 042816 78 ECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQ 157 (163)
Q Consensus 78 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~ 157 (163)
++..|.+|+++|++++.. + .++.++++.|++++||.+.||..|+. ++++||+++. +++++++++++|.++++
T Consensus 314 ~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~-~~~~i~~~~~~l~~~l~ 385 (388)
T 1j32_A 314 ECPKPDGAFYMFPSIAKT----G-RSSLDFCSELLDQHQVATVPGAAFGA--DDCIRLSYAT-DLDTIKRGMERLEKFLH 385 (388)
T ss_dssp BCCCCCBTTEECCBCGGG----T-CCHHHHHHHHHHHHCEECEEGGGGTC--TTBEEEECCS-CHHHHHHHHHHHHHHHH
T ss_pred cccCCCeeEEEEEecCCC----C-CCHHHHHHHHHHhCCEEEeChhhhCC--CCcEEEEecC-CHHHHHHHHHHHHHHHH
Confidence 999999999999988741 0 15788999888657999999998875 6899999986 99999999999999887
Q ss_pred Hh
Q 042816 158 TC 159 (163)
Q Consensus 158 ~~ 159 (163)
++
T Consensus 386 ~~ 387 (388)
T 1j32_A 386 GI 387 (388)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 39
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.85 E-value=7e-22 Score=151.11 Aligned_cols=149 Identities=21% Similarity=0.215 Sum_probs=115.5
Q ss_pred CCCCCceeEEEEEecCHHH-------HHHHHHhhc---ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHH
Q 042816 1 DLSLPGFRISVIYSYNNSV-------LAAAKKLAR---FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVA 70 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~-------~~~~~~~~~---~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 70 (163)
.||+||+|+||+++ ++++ ++.+..... +.++|.+.|.++..+|++. ++++.++.++++++++.+
T Consensus 237 ~~g~~GlriG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-----~~~~~~~~~~~~~~~l~~ 310 (400)
T 3asa_A 237 PLGFAGIRLGWTVI-PQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSIL-----PQLEAIHYYRENSDLLRK 310 (400)
T ss_dssp GGTTTTCCCEEEEC-CTTCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT-----TTCHHHHHHHHHHHHHHH
T ss_pred hcCCcchheeEEee-ChhhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHH
Confidence 37899999999999 7777 565543222 2468999999998888653 467888999999999999
Q ss_pred HhhhcCCccccCCceeEEEee-cCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHH
Q 042816 71 GLRQLGIECAKSNGGFYCWAD-MSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVM 149 (163)
Q Consensus 71 ~l~~~g~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~ 149 (163)
.|++.|+++.+|.+|+|+|++ ++... ++.++++.|++++||.+.||+.|+..+++++||++.. +++++++++
T Consensus 311 ~L~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~~-~~e~i~~~l 383 (400)
T 3asa_A 311 ALLATGFEVFGGEHAPYLWVKPTQANI------SDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSLG-KREDILAAC 383 (400)
T ss_dssp HHHHTTCEEEECSSSSEEEEECCCTTC------CTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECCS-CHHHHHHHH
T ss_pred HHHHCCCeeeCCCCceEEEEeccCCCC------CHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEeeC-CHHHHHHHH
Confidence 999889988888899999999 87533 4567888888767999999999875457899999755 889999999
Q ss_pred HHHHHHHHHhhhc
Q 042816 150 ERIRRISQTCKSH 162 (163)
Q Consensus 150 ~~l~~~~~~~~~~ 162 (163)
++|.++++++.||
T Consensus 384 ~~l~~~~~~~~~~ 396 (400)
T 3asa_A 384 ERLQMAPALQSHH 396 (400)
T ss_dssp HHHHC--------
T ss_pred HHHHHHHHhhhhc
Confidence 9999999877664
No 40
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.85 E-value=1.4e-20 Score=142.92 Aligned_cols=145 Identities=14% Similarity=0.165 Sum_probs=124.8
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhcc---cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhh-c-C
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLARF---SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQ-L-G 76 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~-g 76 (163)
||+||+|+||++++++++++.+...... .+++.+.|.++..++.+. ++++++.++.++++++.+.+.|++ + |
T Consensus 240 ~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 316 (391)
T 4dq6_A 240 FNIAGLQSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNG---ESWLESFLEYLESNIDFAIKYINENMPK 316 (391)
T ss_dssp HTCGGGCCEEEECCSHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred ccCcccceEEEEeCCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 5789999999999446899988877542 478889999888888764 577899999999999999999998 4 8
Q ss_pred CccccCCceeEEEeecCC-cccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHH
Q 042816 77 IECAKSNGGFYCWADMSG-LISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRI 155 (163)
Q Consensus 77 ~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~ 155 (163)
+++.+|++++++|++++. .. +..++++.|++++||.+.||+.|+..+++++||+++. +++++++++++|.++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~ 389 (391)
T 4dq6_A 317 LKVRKPEGTYLLWVDFSALGL------SDEELESILVQKGKVALNQGNSFGIGGSGYQRINLAC-PRSMLEEALIRIKNA 389 (391)
T ss_dssp SEECCCSBSSEEEEECGGGCC------CHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECCS-CHHHHHHHHHHHHHH
T ss_pred CEecCCCccEEEEEEhhhcCC------CHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEcC-CHHHHHHHHHHHHHH
Confidence 999999999999999985 22 6789999998845999999999987667999999996 999999999999987
Q ss_pred H
Q 042816 156 S 156 (163)
Q Consensus 156 ~ 156 (163)
+
T Consensus 390 l 390 (391)
T 4dq6_A 390 I 390 (391)
T ss_dssp H
T ss_pred h
Confidence 6
No 41
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.84 E-value=1.4e-20 Score=142.42 Aligned_cols=148 Identities=14% Similarity=0.186 Sum_probs=128.8
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CC
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL-GI 77 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~ 77 (163)
.||+||+|+||+++ ++++++.+...... .+++.+.|.++...+++. ++++++.++.++++++.+.+.|+++ ++
T Consensus 223 ~~~~~G~r~G~v~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 298 (375)
T 3op7_A 223 TYSLPGIRIGWVAA-NHQVTDILRDYRDYTMICAGVFDDLVAQLALAHY---QEILERNRHILEENLAILDQWIEEEPLV 298 (375)
T ss_dssp SSSCGGGCCEEEEC-CHHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHTH---HHHHHHHHHHHHHHHHHHHHHHHHCTTE
T ss_pred hcCCcccceEEEEe-CHHHHHHHHHHHhhhccCCCcHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHhhCCCc
Confidence 37889999999999 99999999887764 467889999888888764 6788999999999999999999997 88
Q ss_pred ccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHH
Q 042816 78 ECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQ 157 (163)
Q Consensus 78 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~ 157 (163)
.+..|.+|+++|+.++... +..++++.|++++||.+.||..|+. ++++||+++. +.+++++++++|.++++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~-~~~~i~~~l~~l~~~l~ 369 (375)
T 3op7_A 299 SYIRPAVVSTSFVKIAVDM------PMEDFCLQLLQEHGVLLVPGNRFER--DGYVRLGFAC-EQETLIKGLEKLSQFLR 369 (375)
T ss_dssp EECCCSSSSCEEEEECCSS------CHHHHHHHHHHHHCEECEEGGGGTC--TTEEEECCCS-CHHHHHHHHHHHHHHHG
T ss_pred eEecCCCeEEEeEEcCCCC------CHHHHHHHHHHhCCEEEeChhhhCC--CCeEEEEecC-CHHHHHHHHHHHHHHHH
Confidence 8889999999999987643 6788999887669999999998875 7899999997 77999999999999998
Q ss_pred Hhhh
Q 042816 158 TCKS 161 (163)
Q Consensus 158 ~~~~ 161 (163)
++.+
T Consensus 370 ~~~~ 373 (375)
T 3op7_A 370 RFDK 373 (375)
T ss_dssp GGC-
T ss_pred HHhh
Confidence 7754
No 42
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.84 E-value=4.2e-20 Score=141.21 Aligned_cols=150 Identities=15% Similarity=0.185 Sum_probs=127.5
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCChHHHH-HHHHHHHHHHHHHHHHHHHHhhhc--
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSDTKFVQ-KFININRERLRRLYVKFVAGLRQL-- 75 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~-- 75 (163)
.|| ||+|+||+++ ++++++.+...... ++++++.|.++..++++..+ + +++++.++.++++++++.+.|++.
T Consensus 248 ~~~-~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 324 (407)
T 2zc0_A 248 VLG-TGFRIGWIIA-EGEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYF-EKYHLEGALLGYKEKRDIMLKALENHLP 324 (407)
T ss_dssp TTC-TTSCCEEEEC-CHHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHH-HHHTTTTHHHHHHHHHHHHHHHHHHHCT
T ss_pred ccC-CCcceEEEec-CHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCc-hHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 367 9999999999 89999999887664 46789999999999987644 5 778899999999999999999885
Q ss_pred CCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCC--CCceEEEEEecCChhHHHHHHHHHH
Q 042816 76 GIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCI--EPGWFSFSFTLLTEKDIHVVMERIR 153 (163)
Q Consensus 76 g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~--~~~~iRi~~~~~~~~~l~~~~~~l~ 153 (163)
++++..|.+|+|+|++++... +..++++.|.+++||.+.||..|... .++++||+++..+++++++++++|.
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~ 398 (407)
T 2zc0_A 325 NAEFTKPIAGMFVMFFLPEGA------DGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKLA 398 (407)
T ss_dssp TSCBCCCSBSSEEEEECSTTC------CHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSSCTTHHHHHHHHHH
T ss_pred CCEEecCCCcEEEEEEcCCCC------CHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCCCHHHHHHHHHHHH
Confidence 688878899999999998643 67889999988459999999988643 3689999998656899999999999
Q ss_pred HHHHHh
Q 042816 154 RISQTC 159 (163)
Q Consensus 154 ~~~~~~ 159 (163)
++++++
T Consensus 399 ~~l~~~ 404 (407)
T 2zc0_A 399 KLYKEK 404 (407)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998765
No 43
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.84 E-value=1.9e-20 Score=148.78 Aligned_cols=154 Identities=13% Similarity=0.237 Sum_probs=114.9
Q ss_pred CCCCCceeEEEEEecCHH-HHHHHHHhh-------------------------------------c-ccCCChHHHHHH-
Q 042816 1 DLSLPGFRISVIYSYNNS-VLAAAKKLA-------------------------------------R-FSSVSAPSQNLL- 40 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~-~~~~~~~~~-------------------------------------~-~~~~s~~~q~~~- 40 (163)
+||+||+|+||+++ +++ +++.+.+.. . ..+++.+.|.++
T Consensus 316 ~~g~~GlRiG~~~~-~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a 394 (546)
T 2zy4_A 316 YFGATGWRLGVVAA-HQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMA 394 (546)
T ss_dssp TTTCGGGCEEEEEE-ESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHH
T ss_pred ccCCCCcceEEEEE-CCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHH
Confidence 47999999999999 554 777763211 1 136788888764
Q ss_pred ----HHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCceeEEEeecCCcccC-CC---------hhhHHH
Q 042816 41 ----VSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIECAKSNGGFYCWADMSGLISS-YS---------EKGELE 106 (163)
Q Consensus 41 ----~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~-~~---------~~~~~~ 106 (163)
..+++++ +.+.+++++.|++|++.+.+.|. .++.+.+|++|||+|++++.+... ++ ..++.+
T Consensus 395 ~~a~~all~~~---~~~~~~~r~~~~~r~~~l~~~L~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~ 470 (546)
T 2zy4_A 395 LFSLFALMDEA---DEYKHTLKQLIRRRETTLYRELG-MPPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGD 470 (546)
T ss_dssp HHHHHHHHCTT---CHHHHHHHHHHHHHHHHHHGGGT-SSCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHH
T ss_pred HHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhcC-CCcccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHH
Confidence 3556655 57789999999999999999996 567777899999999998642100 00 002344
Q ss_pred HHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHHHhh
Q 042816 107 LWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQTCK 160 (163)
Q Consensus 107 ~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~~~ 160 (163)
+...+++++||.|.||+.|+. +++++|||++..+++++++++++|.++++++.
T Consensus 471 ~l~~ll~~~gV~v~pG~~F~~-~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~~ 523 (546)
T 2zy4_A 471 MLFRIADETGIVLLPGRGFGS-NRPSGRASLANLNEYEYAAIGRALRKMADELY 523 (546)
T ss_dssp HHHHHHHHHSCCCEESSCTTC-SSCEEEEESSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCEEEeCccccCC-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHH
Confidence 444555669999999999986 46899999997688899999999999887654
No 44
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.84 E-value=5e-20 Score=141.17 Aligned_cols=149 Identities=19% Similarity=0.199 Sum_probs=127.8
Q ss_pred CCCCCceeEEEEEecCH-HHHHHHHHhhccc-CCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 042816 1 DLSLPGFRISVIYSYNN-SVLAAAKKLARFS-SVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIE 78 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~-~~~~~~~~~~~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 78 (163)
.||+||+|+||+++ ++ ++++.+......+ +++.+.|.++..+|+.. ..++++.++.++++++++.+.|+++|++
T Consensus 245 ~~g~~G~r~G~~~~-~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 320 (409)
T 2gb3_A 245 KFSACGARVGCLIT-RNEELISHAMKLAQGRLAPPLLEQIGSVGLLNLD---DSFFDFVRETYRERVETVLKKLEEHGLK 320 (409)
T ss_dssp TTTCGGGCCEEEEC-SCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHTCC---HHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ccCCccceEEEEEE-CcHHHHHHHHHHHhccCCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHHcCce
Confidence 47889999999999 65 8999888776655 88999999999999765 5778899999999999999999988888
Q ss_pred c-ccCCceeEEEeecCCcccCCChhhHHHHHHHHHHh-----cCeEEcCCCCCCC---CCCceEEEEEecCChhHHHHHH
Q 042816 79 C-AKSNGGFYCWADMSGLISSYSEKGELELWDKLLNV-----AKVNVTPGSSCHC---IEPGWFSFSFTLLTEKDIHVVM 149 (163)
Q Consensus 79 ~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~gi~v~pg~~f~~---~~~~~iRi~~~~~~~~~l~~~~ 149 (163)
+ ..|.+|+++|++++. .+..++++.|+++ +||.+.||..|+. .+++++||+++. +++++++++
T Consensus 321 ~~~~~~~~~~~~~~~~~-------~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~~-~~e~i~~~~ 392 (409)
T 2gb3_A 321 RFTKPSGAFYITAELPV-------EDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVL-EKDLLSRAI 392 (409)
T ss_dssp CBCCCSBSSEEEEECSS-------SCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCS-CHHHHHHHH
T ss_pred eeeCCCeeEEEEEEeCC-------CCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeCC-CHHHHHHHH
Confidence 8 788999999999972 2678899999875 4999999988864 236899999995 999999999
Q ss_pred HHHHHHHHHhhh
Q 042816 150 ERIRRISQTCKS 161 (163)
Q Consensus 150 ~~l~~~~~~~~~ 161 (163)
++|.+++++++.
T Consensus 393 ~~l~~~l~~~~~ 404 (409)
T 2gb3_A 393 DVLMEGLKMFCS 404 (409)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhhh
Confidence 999999988754
No 45
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.84 E-value=6.9e-20 Score=140.81 Aligned_cols=148 Identities=13% Similarity=0.124 Sum_probs=123.6
Q ss_pred CCCceeEEEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCC--hHHHHHHHHHHHHHHHHHHHHHHHHhhh----
Q 042816 3 SLPGFRISVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSD--TKFVQKFININRERLRRLYVKFVAGLRQ---- 74 (163)
Q Consensus 3 ~~~G~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~---- 74 (163)
++||+|+||+++ ++++++.+...... ++++.+.|.++..++++ +.+ .+++++.++.|+++++.+.+.|.+
T Consensus 255 ~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~l~~ 332 (423)
T 3ez1_A 255 TFAGAGLGFVAS-SEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGL-EGLMRDHAAIIAPKFRAVDEVLRAELGE 332 (423)
T ss_dssp SCSSSSCEEEEE-CHHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHH-HHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccCCcceEEEEe-CHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccchH-HHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 689999999999 99999999887763 67899999999999987 544 788999999999999998888866
Q ss_pred cC--CccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcC-CCCCCC---CCCceEEEEEecCChhHHHHH
Q 042816 75 LG--IECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTP-GSSCHC---IEPGWFSFSFTLLTEKDIHVV 148 (163)
Q Consensus 75 ~g--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~p-g~~f~~---~~~~~iRi~~~~~~~~~l~~~ 148 (163)
.| +.+..|++|+|+|++++.. +...+.+.|.+ +||.+.| |..|.. ..++++||+++..++++++++
T Consensus 333 ~~~~~~~~~p~~g~~~~~~~~~~-------~~~~~~~~l~~-~gv~v~~~g~~~~~~~~~~~~~iRis~~~~~~~~i~~~ 404 (423)
T 3ez1_A 333 GGEYATWTLPKGGYFISLDTAEP-------VADRVVKLAEA-AGVSLTPAGATYPAGQDPHNRNLRLAPTRPPVEEVRTA 404 (423)
T ss_dssp TTSSEEECCCSBSSCEEEEESSS-------CHHHHHHHHHH-TTEECCCTTTTSSTTCCSSSCEEEECCSSSCHHHHHHH
T ss_pred CCCceEEeCCCccEEEEEECCCC-------cHHHHHHHHHH-CCcEEecCcccccCCCCCCCCeEEEEcCCCCHHHHHHH
Confidence 34 6777899999999999863 45677776654 8999999 777753 247899999986689999999
Q ss_pred HHHHHHHHHHhh
Q 042816 149 MERIRRISQTCK 160 (163)
Q Consensus 149 ~~~l~~~~~~~~ 160 (163)
+++|.+++++..
T Consensus 405 ~~~l~~~l~~~~ 416 (423)
T 3ez1_A 405 MQVVAACIRLAT 416 (423)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999987654
No 46
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.84 E-value=3.8e-20 Score=140.02 Aligned_cols=140 Identities=12% Similarity=0.110 Sum_probs=121.2
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIE 78 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 78 (163)
.||+||+|+||+++ ++++++.+...... ++++.+.|.++..++++. +++++.++.++++++.+.+.|+ ++.
T Consensus 232 ~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~l~~~l~--~~~ 304 (376)
T 3ezs_A 232 RSSAPGLRSGFIAG-DSRLLEKYKAFRAYLGYTSANAIQKASEAAWLDD----RHAEFFRNIYANNLKLARKIFK--NTL 304 (376)
T ss_dssp TTTCGGGCCEEEEE-CHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHCS----HHHHHHHHHHHHHHHHHHHHST--TCC
T ss_pred ccCCccceeEEEee-CHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCc----HHHHHHHHHHHHHHHHHHHHhc--CCC
Confidence 47899999999999 99999999887763 678999999999999874 5578999999999999999998 555
Q ss_pred cccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCC--CCCCceEEEEEecCChhHHHHHHHHHHHHH
Q 042816 79 CAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCH--CIEPGWFSFSFTLLTEKDIHVVMERIRRIS 156 (163)
Q Consensus 79 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~--~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~ 156 (163)
.|.+|+|+|++++ +..++++.|++++||.+.||+.|+ ...++++||+++. +++++++++++|.+++
T Consensus 305 --~~~~~~~~~~~~~---------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~l 372 (376)
T 3ezs_A 305 --IYPYSFYVYLPVQ---------NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVY-DTPLLEKPLEIIETYR 372 (376)
T ss_dssp --CCSBSSEEEEECS---------CHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCS-CHHHHHHHHHHHHHHH
T ss_pred --CCCcceEEEEECC---------CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcC-CHHHHHHHHHHHHHHH
Confidence 7899999999997 357888888876899999999998 3457899999987 9999999999999988
Q ss_pred HHh
Q 042816 157 QTC 159 (163)
Q Consensus 157 ~~~ 159 (163)
+++
T Consensus 373 ~~~ 375 (376)
T 3ezs_A 373 ENH 375 (376)
T ss_dssp CC-
T ss_pred Hhc
Confidence 654
No 47
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.84 E-value=1.5e-20 Score=143.93 Aligned_cols=151 Identities=21% Similarity=0.279 Sum_probs=125.9
Q ss_pred CCCCCceeEEEEE--ecCH----HHHHHHHHhhcc-cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042816 1 DLSLPGFRISVIY--SYNN----SVLAAAKKLARF-SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLR 73 (163)
Q Consensus 1 ~~~~~G~RiG~~i--~~~~----~~~~~~~~~~~~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 73 (163)
.||+||+|+||++ + ++ ++++.+...... ++++.+.|.++..+|+.. .+++++.++.++++++++.+.|+
T Consensus 246 ~~~~~G~r~G~~~~~~-~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~ 321 (406)
T 1xi9_A 246 VYFATGWRLGYMYFVD-PENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGP---MDYLKEYMKKLKERRDYIYKRLN 321 (406)
T ss_dssp TTCCGGGCCEEEEEEC-TTCTTHHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSC---CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCccEEEEEEEec-CchhHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhCC---cHHHHHHHHHHHHHHHHHHHHHH
Confidence 3788999999999 8 78 999988876654 688999999999999543 24578899999999999999999
Q ss_pred hc-CCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHH
Q 042816 74 QL-GIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERI 152 (163)
Q Consensus 74 ~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l 152 (163)
++ |+++..|++|+++|++++... + .+..++++.|++++||.+.||..|+..+++++||+++. +++++++++++|
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~~-~~~~i~~~~~~l 396 (406)
T 1xi9_A 322 EIPGISTTKPQGAFYIFPKIEVGP---W-KNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLP-PIEILEEAMDRF 396 (406)
T ss_dssp TSTTEECCCCCBSSEECCEECSCS---C-SSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCS-CHHHHHHHHHHH
T ss_pred hCCCCeeecCCeeEEEEEecCccC---C-CCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEecC-CHHHHHHHHHHH
Confidence 98 888888999999999987410 0 16788999888558999999998875446899999994 999999999999
Q ss_pred HHHHHHhh
Q 042816 153 RRISQTCK 160 (163)
Q Consensus 153 ~~~~~~~~ 160 (163)
.++++++.
T Consensus 397 ~~~l~~~~ 404 (406)
T 1xi9_A 397 EKFMKERL 404 (406)
T ss_dssp HHHHHHC-
T ss_pred HHHHHHHh
Confidence 99987753
No 48
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.84 E-value=1.6e-20 Score=144.31 Aligned_cols=135 Identities=14% Similarity=0.257 Sum_probs=108.8
Q ss_pred CCCCCceeEEEEEe--cCHHHHHHHHH----hhc--ccCCChHHHHHHHHhcCChH----HHHHHHHHHHHHHHHHHHHH
Q 042816 1 DLSLPGFRISVIYS--YNNSVLAAAKK----LAR--FSSVSAPSQNLLVSMLSDTK----FVQKFININRERLRRLYVKF 68 (163)
Q Consensus 1 ~~~~~G~RiG~~i~--~~~~~~~~~~~----~~~--~~~~s~~~q~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~l 68 (163)
+||+||+|+||+++ +++++++.+.. ... .++++.+.|.+++.+|+++. | .++++++++.|+++++.+
T Consensus 250 ~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~-~~~l~~~~~~~~~~R~~l 328 (405)
T 3k7y_A 250 NMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNW-IKELSQLSQRITNNRILF 328 (405)
T ss_dssp TSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred cCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 58999999999864 47777665542 222 24567899999999998863 3 567788899999999999
Q ss_pred HHHhh----hcC----CccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecC
Q 042816 69 VAGLR----QLG----IECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLL 140 (163)
Q Consensus 69 ~~~l~----~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~ 140 (163)
.+.|+ ++| +++.+|+||||+|++++. ++++.| +++||.+.||. |||++..
T Consensus 329 ~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l~~-----------~~~~~L-~~~gV~v~p~~----------Ris~a~~ 386 (405)
T 3k7y_A 329 FNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLA-----------KIAEHL-KTHHIYIINNG----------RINVSGI 386 (405)
T ss_dssp HHHHHHHGGGGTCCCCGGGGSSCCSSEEECGGGG-----------GGTTTT-TTTTEECCTTS----------EEEGGGC
T ss_pred HHHHHhhhhhcCCCCCCccccCCceEEEecCCCH-----------HHHHHH-HHCCEeecCCC----------eEEEecc
Confidence 99999 776 688899999999998763 334566 66999999952 9999877
Q ss_pred ChhHHHHHHHHHHHHHHH
Q 042816 141 TEKDIHVVMERIRRISQT 158 (163)
Q Consensus 141 ~~~~l~~~~~~l~~~~~~ 158 (163)
++++++.++++|.+++.+
T Consensus 387 ~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 387 TKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp CTTHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHhh
Confidence 889999999999998864
No 49
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.83 E-value=1.9e-20 Score=143.11 Aligned_cols=150 Identities=17% Similarity=0.228 Sum_probs=123.2
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc--ccCCChHHHHHHHHhcCC-----hHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR--FSSVSAPSQNLLVSMLSD-----TKFVQKFININRERLRRLYVKFVAGLRQ 74 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 74 (163)
||++|+|+||+++ ++++++.+..... .++++++.|.++..++++ ..+ ++++++.++.++++++++.+.|++
T Consensus 242 ~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~ 319 (410)
T 3e2y_A 242 FSVTGWKLGWSIG-PAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDP-ECYFNSLPKELEVKRDRMVRLLNS 319 (410)
T ss_dssp SSCGGGCCEEEEC-CHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTST-TSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCceEEEEEE-CHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccch-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999 9999999987766 467899999999888863 111 467889999999999999999999
Q ss_pred cCCccccCCceeEEEeecCCcccC-----CChhhHHHHHHHHHHhcCeEEcCCCCCCCC-----CCceEEEEEecCChhH
Q 042816 75 LGIECAKSNGGFYCWADMSGLISS-----YSEKGELELWDKLLNVAKVNVTPGSSCHCI-----EPGWFSFSFTLLTEKD 144 (163)
Q Consensus 75 ~g~~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~-----~~~~iRi~~~~~~~~~ 144 (163)
+|+.+..|++|+|+|++++..... .+..++.+++..+++++||.+.||+.|+.. +++++|||++. ++++
T Consensus 320 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~-~~e~ 398 (410)
T 3e2y_A 320 VGLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIK-KDST 398 (410)
T ss_dssp TTCEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCC-CHHH
T ss_pred CCCeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcC-CHHH
Confidence 999999999999999998753210 011135688888887789999999988642 26899999998 9999
Q ss_pred HHHHHHHHHH
Q 042816 145 IHVVMERIRR 154 (163)
Q Consensus 145 l~~~~~~l~~ 154 (163)
+++++++|.+
T Consensus 399 l~~~l~~l~~ 408 (410)
T 3e2y_A 399 LDAAEEIFRA 408 (410)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999999875
No 50
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.83 E-value=2.7e-20 Score=143.24 Aligned_cols=147 Identities=14% Similarity=0.152 Sum_probs=125.7
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc---ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CC
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR---FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL-GI 77 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~---~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~ 77 (163)
||++|+|+||++++++++++.+..... ..++|++.|.++..+++.. ++++++.++.++++++++.+.|+++ ++
T Consensus 270 ~g~~G~~~G~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~i 346 (421)
T 3l8a_A 270 FNIAGTKNSFAIIQNESLRRKFQYRQLANNQHEVPTVGMIATQAAFQYG---KPWLEELKTVIEGNIKLVIKELEAKTKI 346 (421)
T ss_dssp HTCGGGCCEEEECCSHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred ccCchhheEeEEcCCHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 678999999999934999998887764 2478999999988888754 5778999999999999999999997 89
Q ss_pred ccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHH
Q 042816 78 ECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQ 157 (163)
Q Consensus 78 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~ 157 (163)
++.+|++++++|++++... .+..++.+.|++++||.+.||..|+..+++++||+++. +++++++++++|.++++
T Consensus 347 ~~~~~~~~~~~~v~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 347 KVMEPEGTYLVWLDFSAYA-----IAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVAT-PKNTVQEALSRIISVFG 420 (421)
T ss_dssp EEECCSBSSEEEEECGGGT-----CCTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHC-
T ss_pred eEeCCCeeEEEEEeccccC-----CCHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 9999999999999998521 15678899888767999999999986668999999996 99999999999998764
No 51
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.83 E-value=1.3e-19 Score=138.02 Aligned_cols=139 Identities=21% Similarity=0.391 Sum_probs=120.7
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIE 78 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 78 (163)
.||+||+|+||+++ ++++++.+...... ++++.+.|.++..+|+++ +++.++.++++++++.+.|+++|++
T Consensus 247 ~~~~~G~r~G~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~l~~~L~~~g~~ 319 (389)
T 1o4s_A 247 SHSMTGWRVGYLIS-SEKVATAVSKIQSHTTSCINTVAQYAALKALEVD------NSYMVQTFKERKNFVVERLKKMGVK 319 (389)
T ss_dssp TTTCGGGCCEEEEC-CHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC------CHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hcCCcccceEEEEe-CHHHHHHHHHHhhhcccCCCHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHhcCCe
Confidence 37899999999999 89999998877653 678899999999999875 4677888999999999999988888
Q ss_pred cccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHH
Q 042816 79 CAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQ 157 (163)
Q Consensus 79 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~ 157 (163)
+..|++|+++|++++ . +..++++.|++++||.+.||..|+. ++++||+++. +++++++++++|.++++
T Consensus 320 ~~~~~~~~~~~~~~~--~------~~~~l~~~l~~~~gi~v~~g~~f~~--~~~~Ris~~~-~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 320 FVEPEGAFYLFFKVR--G------DDVKFCERLLEEKKVALVPGSAFLK--PGFVRLSFAT-SIERLTEALDRIEDFLN 387 (389)
T ss_dssp CCCCSBSSEEEEECS--S------CHHHHHHHHHHHHCEECEEGGGGTC--TTEEEEECCS-CHHHHHHHHHHHHHHHT
T ss_pred eecCCcceEEEEeCC--C------CHHHHHHHHHHHCCEEEeCchhcCC--CCeEEEEEeC-CHHHHHHHHHHHHHHHh
Confidence 888999999999987 2 5688999888558999999998875 5799999997 99999999999998875
No 52
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.83 E-value=2.7e-20 Score=147.49 Aligned_cols=157 Identities=17% Similarity=0.284 Sum_probs=119.0
Q ss_pred CCCCceeEEEEEecCHHHHHHH------------------------------------HHhhc--ccCCChHHHHH----
Q 042816 2 LSLPGFRISVIYSYNNSVLAAA------------------------------------KKLAR--FSSVSAPSQNL---- 39 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~------------------------------------~~~~~--~~~~s~~~q~~---- 39 (163)
||+||+|+||++++++.+++.+ .+... ..+++.+.|.+
T Consensus 315 ~g~~G~RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~ 394 (533)
T 3f6t_A 315 FGCTGWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALF 394 (533)
T ss_dssp HTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHH
T ss_pred CCCcccceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHH
Confidence 6899999999999433232222 22222 24678888887
Q ss_pred HHHhcC-C---hHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCceeEEEeecCCcccC-CC---------hhhHH
Q 042816 40 LVSMLS-D---TKFVQKFININRERLRRLYVKFVAGLRQLGIECAKSNGGFYCWADMSGLISS-YS---------EKGEL 105 (163)
Q Consensus 40 ~~~~l~-~---~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~-~~---------~~~~~ 105 (163)
+...|. + +.+ +++++++++.|+++++++.+.|. .++.+..|++|+|+|++++..... .+ ..++.
T Consensus 395 a~~~L~~~~g~~~~-~~~~~~~~~~~~~r~~~l~~~L~-~~~~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~ 472 (533)
T 3f6t_A 395 SMTHLLTSTNGGSD-DPYIDIARKLVSERYDQLHDAMQ-APKDETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQV 472 (533)
T ss_dssp HHHHHTTCBGGGTB-CHHHHHHHHHHHHHHHHHHHHHT-CCCCCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHH
T ss_pred HHHHHhhhccccch-HHHHHHHHHHHHHHHHHHHHhcC-CCccccCCCceEEEEEehHhhhhhccchHHHHHhhccCCHH
Confidence 445564 1 222 68899999999999999999998 888889999999999999752200 00 01456
Q ss_pred HHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHHHhhh
Q 042816 106 ELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQTCKS 161 (163)
Q Consensus 106 ~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~~~~ 161 (163)
+++..+++++||.+.||+.|+. +++++|||++.++++++++++++|.++++++..
T Consensus 473 ~~~~~ll~~~GV~v~pg~~f~~-~~~~iRls~a~~~~e~i~~~i~~L~~~l~~~~~ 527 (533)
T 3f6t_A 473 DFLLKLAEKNGVVLVDGVGFGA-KPGELRVSQANLPTEDYALIGKQVLELLKEYYE 527 (533)
T ss_dssp HHHHHHHHHTTSSSCTTEEECS-STTEEEEESSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEeCCcccCC-CCCEEEEEEeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 7888888778999999999986 368999999877899999999999999887653
No 53
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.82 E-value=4.4e-19 Score=133.78 Aligned_cols=137 Identities=17% Similarity=0.112 Sum_probs=120.5
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIECA 80 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 80 (163)
.||++|+|+||+++ ++++++.+......+++|.+.|.++..++++. +++++.++.++++++++.+.|+++|+++.
T Consensus 228 ~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 302 (365)
T 3get_A 228 LYGLGGLRIGYGIA-NANIISAFYKLRAPFNVSNLALKAAVAAMDDD----EFTEKTLENNFSQMELYKEFAKKHNIKII 302 (365)
T ss_dssp TTSCTTTCCEEEEE-CHHHHHHHHHHSCTTCSCHHHHHHHHHHHTCH----HHHHHHHHHHHHHHHHHHHHHHHTTCEEC
T ss_pred HhcCcchheEEEEc-CHHHHHHHHHhcCCCCcCHHHHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHHHHHhCCCEEC
Confidence 47899999999999 99999999998888889999999999999974 67889999999999999999999998887
Q ss_pred cCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHH
Q 042816 81 KSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRIS 156 (163)
Q Consensus 81 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~ 156 (163)
++.++ |+|++++.. +..++.+.|.+ +||.+.||..|+ ++++||+++ +.++++++++.|.+++
T Consensus 303 ~~~~~-~~~~~~~~~-------~~~~~~~~l~~-~gi~v~~g~~~~---~~~iRis~~--~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 303 DSYTN-FITYFFDEK-------NSTDLSEKLLK-KGIIIRNLKSYG---LNAIRITIG--TSYENEKFFTEFDKIL 364 (365)
T ss_dssp CCSSS-EEEEECSSS-------CHHHHHHHHHT-TTEECEECGGGT---CSEEEEECC--CHHHHHHHHHHHHHHH
T ss_pred CCCCe-EEEEECCCC-------CHHHHHHHHHH-CCEEEEECccCC---CCEEEEEcC--CHHHHHHHHHHHHHHh
Confidence 76665 589999852 56889998876 799999999887 689999998 6789999999998765
No 54
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.82 E-value=3.1e-19 Score=134.61 Aligned_cols=137 Identities=15% Similarity=0.225 Sum_probs=114.3
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-Ccc
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLG-IEC 79 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~ 79 (163)
.||+||+|+||+++ ++++++.+......+++|++.|.++..+|++..+ +++++.++.++++++++.+.|++++ +..
T Consensus 215 ~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 291 (356)
T 1fg7_A 215 AFALAGLRCGFTLA-NEEVINLLMKVIAPYPLSTPVADIAAQALSPQGI--VAMRERVAQIIAEREYLIAALKEIPCVEQ 291 (356)
T ss_dssp TTCCGGGCCEEEEE-CHHHHHHHHHHSCSSCSCHHHHHHHHHHTSHHHH--HHHHHHHHHHHHHHHHHHHHHHHSTTEEE
T ss_pred hhcCchhhhEEEEe-CHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCccH--HHHHHHHHHHHHHHHHHHHHHHhCCCceE
Confidence 47899999999999 9999999998887778999999999999987543 3588999999999999999999885 323
Q ss_pred ccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcC-CCCCCCCCCceEEEEEecCChhHHHHHHHHHHH
Q 042816 80 AKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTP-GSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRR 154 (163)
Q Consensus 80 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~p-g~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~ 154 (163)
..|.+|+|+|++++ ++.++++.|.+ +||.+.| |..|+. ++++||+++ +.++++++++.|.+
T Consensus 292 ~~~~~~~~~~~~~~---------~~~~l~~~L~~-~gI~v~~~g~~~~~--~~~iRis~~--~~~e~~~~~~~l~~ 353 (356)
T 1fg7_A 292 VFDSETNYILARFK---------ASSAVFKSLWD-QGIILRDQNKQPSL--SGCLRITVG--TREESQRVIDALRA 353 (356)
T ss_dssp ECCCSSSEEEEEET---------THHHHHHHHHH-TTEECEECTTSTTC--TTEEEEECC--CHHHHHHHHHHHHT
T ss_pred ECCCCCeEEEEECC---------CHHHHHHHHHH-CCEEEEECCCCCCC--CCeEEEEeC--CHHHHHHHHHHHHh
Confidence 34567889999987 35788888865 8999999 888874 569999998 56788888888764
No 55
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.82 E-value=1.2e-19 Score=139.04 Aligned_cols=154 Identities=21% Similarity=0.314 Sum_probs=121.2
Q ss_pred CCCCceeEEEEEecCH-----HHHHHHHHhh-cccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 042816 2 LSLPGFRISVIYSYNN-----SVLAAAKKLA-RFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL 75 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~-----~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 75 (163)
|++||+|+||++++++ .+...+.... ..+++|++.|.++..+|+... +.++++.++.++++++++.+.|+++
T Consensus 255 ~~~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (416)
T 1bw0_A 255 LVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTP--QEHLDQIVAKIEESAMYLYNHIGEC 332 (416)
T ss_dssp TSCGGGCCEEEEEECTTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSC--HHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CCCCCceEEEEEeeCchhhHHHHHHHHHHHhccccCCCcHHHHHHHHHHhccc--HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6899999999999444 3443333332 246789999999999987532 4677889999999999999999988
Q ss_pred -CCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHH
Q 042816 76 -GIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRR 154 (163)
Q Consensus 76 -g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~ 154 (163)
|+++..|.+|+|+|++++...- .+..++.++++.|++++||.+.||..|+. ++++||+++. +++++++++++|.+
T Consensus 333 ~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~gi~v~~g~~f~~--~~~iRis~~~-~~e~l~~~l~~l~~ 408 (416)
T 1bw0_A 333 IGLAPTMPRGAMYLMSRIDLEKY-RDIKTDVEFFEKLLEEENVQVLPGTIFHA--PGFTRLTTTR-PVEVYREAVERIKA 408 (416)
T ss_dssp TTEEECCCCBTTEEEEEECGGGB-SSCCSHHHHHHHHHHHHCEECEEGGGGTC--TTEEEEECCS-CHHHHHHHHHHHHH
T ss_pred CCCcccCCCeeEEEEEeCCHHHc-CCCCCHHHHHHHHHHHCCEEEecccccCC--CCeEEEEecC-CHHHHHHHHHHHHH
Confidence 8888888999999998864100 00015678888887568999999998874 6799999986 88999999999999
Q ss_pred HHHHhhh
Q 042816 155 ISQTCKS 161 (163)
Q Consensus 155 ~~~~~~~ 161 (163)
+++++++
T Consensus 409 ~l~~~~~ 415 (416)
T 1bw0_A 409 FCQRHAA 415 (416)
T ss_dssp HHHHHBC
T ss_pred HHHHhhc
Confidence 9987653
No 56
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.71 E-value=5.5e-22 Score=151.24 Aligned_cols=148 Identities=16% Similarity=0.113 Sum_probs=124.3
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhccc---CCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhh-c-
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARFS---SVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQ-L- 75 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~- 75 (163)
.||+||+|+||++++++++++.+......+ +++++.|.++..+|++. ++++++.++.++++++.+.+.|++ +
T Consensus 239 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~ 315 (392)
T 3b1d_A 239 TFNIAGTKNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRYG---KPWLVALKAVLEENIQFAVEYFAQEAP 315 (392)
Confidence 378899999999993456999888776643 56889999898888865 577899999999999999999988 5
Q ss_pred CCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHH
Q 042816 76 GIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRI 155 (163)
Q Consensus 76 g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~ 155 (163)
++++.+|+++|++|++++... .+..++++.|++++||.+.||..|+..+++++||+++. +++++++++++|.++
T Consensus 316 ~~~~~~~~~~~~~~i~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~e~i~~~l~~l~~~ 389 (392)
T 3b1d_A 316 RLKVMKPQGTYLIWLDFSDYG-----LTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAA-PKSLVEEICKRIVCC 389 (392)
Confidence 899999999999999997520 15678888887558999999999975557899999998 789999999999887
Q ss_pred HH
Q 042816 156 SQ 157 (163)
Q Consensus 156 ~~ 157 (163)
++
T Consensus 390 l~ 391 (392)
T 3b1d_A 390 LP 391 (392)
Confidence 64
No 57
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.82 E-value=2.4e-19 Score=137.39 Aligned_cols=139 Identities=13% Similarity=0.200 Sum_probs=117.4
Q ss_pred CCCCceeEEEEEec--CHHHHHHHHHhhcc------cCCChHHHHHHHHhcCChH---HHHHHHHHHHHHHHHHHHHHHH
Q 042816 2 LSLPGFRISVIYSY--NNSVLAAAKKLARF------SSVSAPSQNLLVSMLSDTK---FVQKFININRERLRRLYVKFVA 70 (163)
Q Consensus 2 ~~~~G~RiG~~i~~--~~~~~~~~~~~~~~------~~~s~~~q~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~l~~ 70 (163)
||+||+|+||++++ ++++++.+...... .+++.+.|.++..+++++. | .++.++.++.++++++++.+
T Consensus 263 ~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~ 341 (413)
T 3t18_A 263 HTAYGLRSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIY-EQELVDLRNMLKSRADVFVT 341 (413)
T ss_dssp TTCGGGCCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCcCcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 78999999999984 78999988876542 3588999999999999875 3 56778899999999999999
Q ss_pred HhhhcCCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHH
Q 042816 71 GLRQLGIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVME 150 (163)
Q Consensus 71 ~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~ 150 (163)
.|+++|+++.+|++|||+|+++. ++.++++.|.+ +||.+.|| ++++||+++..+.+++ ++
T Consensus 342 ~l~~~g~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~-~gv~v~~g-------~~~iRis~~~~~~~~~---l~ 401 (413)
T 3t18_A 342 AAKENKLTMIPYFGGFFTFIPTD---------KAFDIVKDLEK-ENIFTIPS-------AKGIRVAICGVGEEKI---PK 401 (413)
T ss_dssp HHHHTTCCCBCCCSSSCEEEECS---------CHHHHHHHHHH-TTEECEEC-------SSEEEECTTTSCGGGH---HH
T ss_pred HHHHcCCCccCCCceEEEEeCCC---------CHHHHHHHHHh-CCEEEecC-------CCceEEEEeeCCHHHH---HH
Confidence 99999999999999999999874 56888887754 89999997 4789999986576776 99
Q ss_pred HHHHHHHHhhh
Q 042816 151 RIRRISQTCKS 161 (163)
Q Consensus 151 ~l~~~~~~~~~ 161 (163)
+|.++++++++
T Consensus 402 ~l~~~l~~~~~ 412 (413)
T 3t18_A 402 LVQRLAFYTNK 412 (413)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhc
Confidence 99998887754
No 58
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.82 E-value=2.5e-19 Score=138.46 Aligned_cols=150 Identities=14% Similarity=0.235 Sum_probs=125.8
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCChHHHHHHHHH-HHHHHHHHHHHHHHHhhhc---
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSDTKFVQKFINI-NRERLRRLYVKFVAGLRQL--- 75 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~--- 75 (163)
+++||+|+||+++ ++++++.+...... ++++++.|.++..++++..+ .++..+ .++.|+++++.+.+.|.+.
T Consensus 277 ~~~~G~r~G~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 354 (444)
T 3if2_A 277 IGLPGMRTGIIVA-DAKVIEAVSAMNAVVNLAPTRFGAAIATPLVANDRI-KQLSDNEIKPFYQKQATLAVKLLKQALGD 354 (444)
T ss_dssp TTCGGGCCEEEEC-CHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHTSHH-HHHHHHTHHHHHHHHHHHHHHHHHHHSSS
T ss_pred ccCCCCceEEEEE-CHHHHHHHHHHHHhccCCCChHHHHHHHHHHHcCch-hHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3789999999999 99999999887763 67899999999999998776 555555 8889999999999888764
Q ss_pred -CCccccCCceeEEEeecCC-cccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCC--------CceEEEEEecCChhHH
Q 042816 76 -GIECAKSNGGFYCWADMSG-LISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIE--------PGWFSFSFTLLTEKDI 145 (163)
Q Consensus 76 -g~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~--------~~~iRi~~~~~~~~~l 145 (163)
++.+..|.+|+|+|++++. .+ +..++++.|.+ +||.+.||+.|.... ++++||+++. +++++
T Consensus 355 ~~~~~~~~~~g~~~~~~~~~~~~------~~~~l~~~l~~-~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~-~~e~i 426 (444)
T 3if2_A 355 YPLMIHKPEGAIFLWLWFKDLPI------STLDLYERLKA-KGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA-DEQTL 426 (444)
T ss_dssp SSEEEECCCBSSEEEEEETTCSS------CHHHHHHHHHH-TTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS-CHHHH
T ss_pred CCceEecCCccEEEEEEcCCCCC------CHHHHHHHHHH-CCeEEecchhhcCCCCCcccccCCCeEEEEEeC-CHHHH
Confidence 4677788999999999985 33 67889988865 899999999885421 3799999998 99999
Q ss_pred HHHHHHHHHHHHHhhh
Q 042816 146 HVVMERIRRISQTCKS 161 (163)
Q Consensus 146 ~~~~~~l~~~~~~~~~ 161 (163)
++++++|.++++++..
T Consensus 427 ~~~l~~l~~~~~~~~~ 442 (444)
T 3if2_A 427 IDGIKVIGEVVRELYD 442 (444)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHc
Confidence 9999999999987653
No 59
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.82 E-value=1e-19 Score=138.65 Aligned_cols=140 Identities=22% Similarity=0.396 Sum_probs=115.5
Q ss_pred CCCCCceeEEEEEecCHH------HHHHHHHhhc---ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 042816 1 DLSLPGFRISVIYSYNNS------VLAAAKKLAR---FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAG 71 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~------~~~~~~~~~~---~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 71 (163)
.||+||+|+||+++ +++ +.+.+..... ..+++.+.|.++..++++.. .++.++++++++.+.
T Consensus 249 ~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--------~~~~~~~~~~~l~~~ 319 (398)
T 3ele_A 249 SLSLPGERIGYVLV-PDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG--------DINAYKENRDLLYEG 319 (398)
T ss_dssp TSSCTTTCCEEEEC-CTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC--------CHHHHHHHHHHHHHH
T ss_pred cCCCccceeEEEEE-cchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH--------HHHHHHHHHHHHHHH
Confidence 47899999999999 554 4444444333 35678899999999888752 356788889999999
Q ss_pred hhhcCCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHH
Q 042816 72 LRQLGIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMER 151 (163)
Q Consensus 72 l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~ 151 (163)
|+++|+++..|++|+|+|++++.. ++.++++.|.+ +||.+.||+.|+. ++++||+++. +++++++++++
T Consensus 320 L~~~g~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~-~gi~v~~g~~~~~--~~~iRis~~~-~~e~i~~~l~~ 388 (398)
T 3ele_A 320 LTRIGYHCFKPDGAFYMFVKALED-------DSNAFCEKAKE-EDVLIVAADGFGC--PGWVRISYCV-DREMIKHSMPA 388 (398)
T ss_dssp HHHHTCCEECCSBSSEEEEECSSS-------CHHHHHHHHHT-TTEECEESGGGTC--TTEEEEECCS-CHHHHHHHHHH
T ss_pred HHHcCCeecCCCeeEEEEEEcCCC-------CHHHHHHHHHH-CCEEEeCccccCC--CCeEEEEecC-CHHHHHHHHHH
Confidence 998899999999999999999852 57788887765 8999999999975 6899999985 99999999999
Q ss_pred HHHHHHHhh
Q 042816 152 IRRISQTCK 160 (163)
Q Consensus 152 l~~~~~~~~ 160 (163)
|.+++++++
T Consensus 389 l~~~l~~~~ 397 (398)
T 3ele_A 389 FEKIYKKYN 397 (398)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhh
Confidence 999998875
No 60
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.81 E-value=1.5e-19 Score=139.24 Aligned_cols=149 Identities=14% Similarity=0.121 Sum_probs=124.4
Q ss_pred CCCCCceeEEEEEecCHHHHH-H-----------------HHHhhc--ccCCChHHHHHHHHhcCChHHHHHHHHHHHHH
Q 042816 1 DLSLPGFRISVIYSYNNSVLA-A-----------------AKKLAR--FSSVSAPSQNLLVSMLSDTKFVQKFININRER 60 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~-~-----------------~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~ 60 (163)
.||+||+|+||+++ ++++++ . +.+... .++++.+.|.++..+|++....+.++++.++.
T Consensus 261 ~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 339 (437)
T 3g0t_A 261 AFSYAGQRIGVLMI-SGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIE 339 (437)
T ss_dssp TTSCGGGCCEEEEE-CHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHH
T ss_pred CCCCccceeEEEEE-CHHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHH
Confidence 37899999999999 899988 7 665554 36899999999999998752112227899999
Q ss_pred HHHHHHHHHHHhhhcCCccc-------cCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceE
Q 042816 61 LRRLYVKFVAGLRQLGIECA-------KSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWF 133 (163)
Q Consensus 61 ~~~~~~~l~~~l~~~g~~~~-------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~i 133 (163)
++++++.+.+.|+++|+++. ++.+|+|+|++++. . +..++++.|.+ +||.+.||..|+...++++
T Consensus 340 ~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~l~~~L~~-~gi~v~~~~~~~~~~~~~i 411 (437)
T 3g0t_A 340 YGRKARIMKKMFLDNGFNIVYDKDGNEPLADGFYFTVGYKG-M------DSSKLIEKFVR-YGMCAITLKTTGSKRNEAM 411 (437)
T ss_dssp HHHHHHHHHHHHHTTTEEESSCEETTEECCSSSEEEEEETT-C------CHHHHHHHHHH-TTEECEESTTTTCCCTTCE
T ss_pred HHHHHHHHHHHHHHcCCEEeccccCCCCCceeEEEEEecCC-C------CHHHHHHHHHH-cCeEEeeccccCCCCCCEE
Confidence 99999999999999888887 44899999999983 2 67899999887 7999999999886545899
Q ss_pred EEEEecCChhHHHHHHHHHHHHHHH
Q 042816 134 SFSFTLLTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 134 Ri~~~~~~~~~l~~~~~~l~~~~~~ 158 (163)
|||++..+.+++++++++|.+++++
T Consensus 412 Ris~~~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 412 RICTSLLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp EEECSSSCGGGHHHHHHHHHHHHHH
T ss_pred EEEEecCCHHHHHHHHHHHHHHHhc
Confidence 9999976889999999999988753
No 61
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.81 E-value=1.2e-19 Score=137.74 Aligned_cols=146 Identities=23% Similarity=0.407 Sum_probs=119.2
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc--ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR--FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIEC 79 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~ 79 (163)
||+||+|+||+++ ++++++.+..... .++++++.|.++..+|+...+ ++++++.++.++++++++.+.|++.|+++
T Consensus 224 ~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 301 (381)
T 1v2d_A 224 LEATGYRVGWIVG-PKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARR-EGFYEALREGYRRRRDLLAGGLRAMGLRV 301 (381)
T ss_dssp TTCGGGCCEEEEC-CTTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred cCCcccceEEEEe-CHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCccc-HHHHHHHHHHHHHHHHHHHHHHHHCCCEe
Confidence 7889999999999 8889888877665 367889999998888875432 46788999999999999999999989999
Q ss_pred ccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCC--CCCceEEEEEecCChhHHHHHHHHHHHHHH
Q 042816 80 AKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHC--IEPGWFSFSFTLLTEKDIHVVMERIRRISQ 157 (163)
Q Consensus 80 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~--~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~ 157 (163)
..|.+|+|+|++++.. + +.+ +++++||.+.||..|.. ..++++||+++. +.+++++++++|.++++
T Consensus 302 ~~~~~~~~~~~~~~~~-------~---~~~-~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~-~~~~i~~~~~~l~~~l~ 369 (381)
T 1v2d_A 302 YVPEGTYFLMAELPGW-------D---AFR-LVEEARVALIPASAFYLEDPPKDLFRFAFCK-TEEELHLALERLGRVVN 369 (381)
T ss_dssp ECCSBSSEEEEECTTC-------C---HHH-HHHHTCEECEEGGGGCSSSCCTTEEEEECCS-CHHHHHHHHHHHHHHC-
T ss_pred cCCCcceEEEEecChH-------h---HHH-HHHhCCEEEecchHhCCCCCCCCEEEEEeCC-CHHHHHHHHHHHHHHHh
Confidence 9999999999999752 2 444 45559999999998874 246899999998 99999999999999987
Q ss_pred Hhhh
Q 042816 158 TCKS 161 (163)
Q Consensus 158 ~~~~ 161 (163)
+.+.
T Consensus 370 ~~r~ 373 (381)
T 1v2d_A 370 SPRE 373 (381)
T ss_dssp ----
T ss_pred hccc
Confidence 7654
No 62
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.81 E-value=1.6e-18 Score=130.70 Aligned_cols=144 Identities=23% Similarity=0.302 Sum_probs=119.0
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIECA 80 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 80 (163)
.||++|+|+||+++ ++++++.+......+++|.+.|.++..+|++. +++++.++.++++++.+.+.|+++|+.+.
T Consensus 215 ~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 289 (360)
T 3hdo_A 215 SYSLAGMRIGLAIA-RPEVIAALDKIRDHYNLDRLAQAACVAALRDQ----AYLSECCRRIRETREWFTTELRSIGYDVI 289 (360)
T ss_dssp TTSCTTSCCEEEEC-CHHHHHHHHHHSCSCCSCHHHHHHHHHHHHCH----HHHHHHHHHHHHHHHHHHHHHHHTTCEEC
T ss_pred hhcCCccceeeEee-CHHHHHHHHHhCCCCCCCHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHHHHHHHCCCEEc
Confidence 37899999999999 99999999998888899999999999999874 56788999999999999999999888887
Q ss_pred cCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHHHhh
Q 042816 81 KSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQTCK 160 (163)
Q Consensus 81 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~~~ 160 (163)
++. |.|+|++++.. +..++.+.|.+ +||.+.||..+. .++++||+++ +.++++..++.|+++.+.+.
T Consensus 290 ~~~-~~~~~~~~~~~-------~~~~l~~~l~~-~gi~v~~~~~~~--~~~~iRis~~--~~~e~~~l~~al~~~~~~~~ 356 (360)
T 3hdo_A 290 PSQ-GNYLFATPPDR-------DGKRVYDGLYA-RKVLVRHFSDPL--LAHGMRISIG--TREEMEQTLAALKEIGEGHH 356 (360)
T ss_dssp CCS-SSEEEEECTTC-------CHHHHHHHHHH-TTEECBCCCSTT--TTTSEEEECC--CHHHHHHHHHHHHHHHC---
T ss_pred CCC-ccEEEEECCCC-------CHHHHHHHHHH-CCEEEEECCCCC--CCCEEEEEcC--CHHHHHHHHHHHHHHhcccc
Confidence 655 55678887742 67888988876 899999987632 3689999998 67899999999999887665
Q ss_pred hc
Q 042816 161 SH 162 (163)
Q Consensus 161 ~~ 162 (163)
+|
T Consensus 357 ~~ 358 (360)
T 3hdo_A 357 HH 358 (360)
T ss_dssp --
T ss_pred cc
Confidence 54
No 63
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.80 E-value=1.9e-18 Score=130.24 Aligned_cols=136 Identities=13% Similarity=0.166 Sum_probs=119.0
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcc
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL-GIEC 79 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~ 79 (163)
.||++|+|+||+++ ++++++.+......++++.+.|.++..++++. +++++.++.++++++.+.+.|+++ |+++
T Consensus 226 ~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~ 300 (363)
T 3ffh_A 226 IYGLASARVGYGIA-DKEIIRQLNIVRPPFNTTSIGQKLAIEAIKDQ----AFIGECRTSNANGIKQYEAFAKRFEKVKL 300 (363)
T ss_dssp TTCCSSCCCEEEEE-CHHHHHHHHHTCCSCCCBHHHHHHHHHHHHCH----HHHHHHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred hhcCchhceeeeec-CHHHHHHHHHhCCCCCCCHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHHHHHhhCCCceE
Confidence 37899999999999 99999999998888899999999999999864 667889999999999999999994 9888
Q ss_pred ccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHH
Q 042816 80 AKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRI 155 (163)
Q Consensus 80 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~ 155 (163)
.++.+ .|+|++++. +..++.+.|.+ +||.+.||..|+. ++++||+++ ++++++.+++.|.++
T Consensus 301 ~~~~~-~~~~~~~~~--------~~~~~~~~l~~-~gi~v~~g~~~~~--~~~iRis~~--~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 301 YPANG-NFVLIDLGI--------EAGTIFSYLEK-NGYITRSGAALGF--PTAVRITIG--KEEDNSAVIALLEKL 362 (363)
T ss_dssp CCCCS-SEEEEECSS--------CHHHHHHHHHH-TTEECEETTTTTC--TTEEEEECC--CHHHHHHHHHHHHHH
T ss_pred CCCCC-eEEEEECCC--------CHHHHHHHHHH-CCeEEEeCccCCC--CCeEEEECC--CHHHHHHHHHHHHHh
Confidence 76655 568999985 56889998886 8999999999975 789999998 778999999988875
No 64
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.80 E-value=3.3e-18 Score=128.42 Aligned_cols=138 Identities=13% Similarity=0.225 Sum_probs=119.4
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIECA 80 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 80 (163)
.||++|+|+||+++ ++++++.+......+++|.+.|.++..+|++. +++++.++.++++++.+.+.|+++|+.+.
T Consensus 214 ~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 288 (354)
T 3ly1_A 214 IHAMAGMRVGYAVA-HPTVIALMGRYVAGEKINFSGVDAALASMNDS----AFITYSKKSNDVSRQILLKALEDLKLPYL 288 (354)
T ss_dssp TTCCGGGCCEEEEC-CHHHHHHHGGGTTCSCCCHHHHHHHHHHTTCH----HHHHHHHHHHHHHHHHHHHHHHHHTCCBC
T ss_pred hccChhhhheeeec-CHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHHHHHHHCCCeEC
Confidence 37899999999999 99999999988888899999999999999975 66789999999999999999999888887
Q ss_pred cCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHHH
Q 042816 81 KSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 81 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~ 158 (163)
++. |.|+|++++. +..++.+.|.+ +||.+. |..++ .++++||+++ ++++++++++.|.+++++
T Consensus 289 ~~~-~~~~~~~~~~--------~~~~~~~~l~~-~gi~v~-g~~~~--~~~~iRis~~--~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 289 PSE-GNFVFHQLVV--------PLKDYQTHMAD-AGVLIG-RAFPP--ADNWCRISLG--TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp CCC-SSEEEEECSS--------CHHHHHHHHHH-TTEECC-CCCTT--CTTEEEEECC--CHHHHHHHHHHHHHHHHT
T ss_pred CCC-ceEEEEECCC--------CHHHHHHHHHH-CCEEEe-ecCCC--CCCEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence 654 5568999985 56888988876 899999 77554 4789999988 678999999999998764
No 65
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.80 E-value=7.6e-19 Score=132.57 Aligned_cols=143 Identities=15% Similarity=0.227 Sum_probs=116.6
Q ss_pred CCCCCceeEEEEE-ecCHHHHHHHHHhhcccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCc
Q 042816 1 DLSLPGFRISVIY-SYNNSVLAAAKKLARFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL-GIE 78 (163)
Q Consensus 1 ~~~~~G~RiG~~i-~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~ 78 (163)
.||+||+|+||++ + ++++++.+......+++|.+.|.++..+|++. +++++.++.++++++.+.+.|+++ |++
T Consensus 217 ~~~~~G~r~G~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 291 (364)
T 1lc5_A 217 FYAIPGLRLGYLVNS-DDAAMARMRRQQMPWSVNALAALAGEVALQDS----AWQQATWHWLREEGARFYQALCQLPLLT 291 (364)
T ss_dssp TTTCTTTCCEEEECC-CHHHHHHHHHHSCTTCSCHHHHHHHHHGGGCH----HHHHHHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred hhcCCccceEEEEEC-CHHHHHHHHHhCCCCCCCHHHHHHHHHHHhCc----HHHHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 3788999999999 8 99999999888777889999999999999884 578899999999999999999988 888
Q ss_pred cccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHHH
Q 042816 79 CAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 79 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~ 158 (163)
+.++. |.|+|++++. +..++++.|.+ +||.+.||..|...+++++||+++ ..+++++.++.|.+++++
T Consensus 292 ~~~~~-g~~~~~~~~~--------~~~~l~~~l~~-~gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l~~~l~~~~~~ 359 (364)
T 1lc5_A 292 VYPGR-ANYLLLRCER--------EDIDLQRRLLT-QRILIRSCANYPGLDSRYYRVAIR--SAAQNERLLAALRNVLTG 359 (364)
T ss_dssp ECCCS-SSEEEEEESC--------TTCCHHHHHHT-TTEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHC--
T ss_pred ECCCC-CeEEEEECCC--------cHHHHHHHHHH-CCcEEeeCcccCCCCCCEEEEEeC--CHHHHHHHHHHHHHHhhc
Confidence 77654 5567888874 34568888876 799999999987555789999998 567778888888877766
Q ss_pred hh
Q 042816 159 CK 160 (163)
Q Consensus 159 ~~ 160 (163)
++
T Consensus 360 ~~ 361 (364)
T 1lc5_A 360 IA 361 (364)
T ss_dssp --
T ss_pred cc
Confidence 53
No 66
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.80 E-value=2.7e-18 Score=129.06 Aligned_cols=141 Identities=15% Similarity=0.283 Sum_probs=117.0
Q ss_pred CCCCCceeEEEEE-ecCHHHHHHHHHhhcccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCc
Q 042816 1 DLSLPGFRISVIY-SYNNSVLAAAKKLARFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL-GIE 78 (163)
Q Consensus 1 ~~~~~G~RiG~~i-~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~ 78 (163)
.||++|+|+||++ . ++++++.+......+++|++.|.++..++++. +++++.++.++++++.+.+.|+++ ++.
T Consensus 216 ~~~~~G~r~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 290 (361)
T 3ftb_A 216 FFAMPGIRFGYGITN-NKEIAAKIKAKQNPWNINCFAEMAAINCLKDT----NYIEESLLWIKKERKRFIEELNKIGFIK 290 (361)
T ss_dssp TTSCGGGCCEEEEES-CHHHHHHHHTTSCTTCSCHHHHHHHHHTSSCH----HHHHHHHHHHHHHHHHHHHHHHHSSSEE
T ss_pred hcCCCCcceeEEEeC-CHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 3789999999999 6 99999999988877899999999999999974 678899999999999999999998 788
Q ss_pred -cccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHH
Q 042816 79 -CAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQ 157 (163)
Q Consensus 79 -~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~ 157 (163)
+.++.|+ |+|++++. . +..++++.|.+ +||.+.||+.|+..+++++||+++ ..++++..++.|.++.+
T Consensus 291 ~~~~~~~~-~~~~~~~~-~------~~~~l~~~l~~-~gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 291 RVFSPHAN-FVLCRLEN-I------SGEKLYDSLLK-EDIVIRRCCNFIGLDDSFVRFAIK--DEKKNTKFLRALKGVEN 359 (361)
T ss_dssp EEECCSSS-EEEEEESS-S------CHHHHHHHHHT-TTEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHHH
T ss_pred eecCCCCe-EEEEEcCC-C------CHHHHHHHHHH-CCeEEeeCccCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHHh
Confidence 6666655 67888876 2 67899998887 699999999998666899999998 44555555555555443
No 67
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.79 E-value=3e-19 Score=134.10 Aligned_cols=142 Identities=16% Similarity=0.232 Sum_probs=114.4
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhcccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCccc
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLARFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL-GIECA 80 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~ 80 (163)
||+||+|+||+++ ++++++.+......++++.+.|.++..+|++.. .+.++.++.+ ++++.+.+.|+++ |+++.
T Consensus 199 ~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~-~~~~~l~~~L~~~~~~~~~ 273 (350)
T 3fkd_A 199 YGIPGLRIGYIVA-NKDFMKRVAAFSTPWAVNALAIEAAKFILIHPA---QFTLPIRKWQ-RNTVDFITALNRLDGVEVH 273 (350)
T ss_dssp HSCGGGCCEEEEC-CHHHHHHHHTTCCTTCSCHHHHHHHHHHHHCTT---TTCCCHHHHH-HHHHHHHHHHHHSTTEEEC
T ss_pred ccCcchheEeEEe-CHHHHHHHHHhCCCCCCCHHHHHHHHHHHhCHH---HHHHHHHHHH-HHHHHHHHHHhcCCCcEEC
Confidence 6789999999999 999999999988888999999999999998763 2344455555 8889999999998 88887
Q ss_pred cCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHHH
Q 042816 81 KSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 81 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~ 158 (163)
++. |.|+|++++.. +..++++.|.+++||.+.||+.|+..+++++||+++ ..++++..++.|.++.++
T Consensus 274 ~~~-~~~~~~~~~~~-------~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~~~ 341 (350)
T 3fkd_A 274 PSG-TTFFLLRLKKG-------TAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ--RPAQNQLFIKALETFLEK 341 (350)
T ss_dssp CCS-SSEEEEEESSS-------CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHHTC
T ss_pred CCC-CcEEEEECCCC-------CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHHHH
Confidence 655 55678888752 568899988876899999999998666899999998 556666677766666543
No 68
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.78 E-value=5.7e-18 Score=126.23 Aligned_cols=136 Identities=17% Similarity=0.228 Sum_probs=108.4
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIECA 80 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 80 (163)
.||+||+|+||+++ ++++++.+.+....++++.+.|.++..++++.. +.++.++.+.++++.+.+.|+++|+++.
T Consensus 199 ~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 273 (337)
T 3p1t_A 199 SYGLAGLRLGALFG-PSELIAAMKRKQWFCNVGTLDLHALEAALDNDR----AREAHIAKTLAQRRRVADALRGLGYRVA 273 (337)
T ss_dssp TTCCTTTCCEEEEC-CHHHHHHHHTTSCTTCSCHHHHHHHHHHHTCHH----HHHHHHHHHHHHHHHHHHHHHHTTCCBC
T ss_pred hccCcchheEEEEe-CHHHHHHHHhhcCCCCCCHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHHHHHHHCcCEEC
Confidence 47899999999999 999999998887778899999999999999853 2345555566778899999999899988
Q ss_pred cCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHH
Q 042816 81 KSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRIS 156 (163)
Q Consensus 81 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~ 156 (163)
+++++| +|+..+. ..++.+.|. ++||.+.||..|+. ++++|||++ +.++++..++.|.++.
T Consensus 274 ~~~~~~-~~~~~~~---------~~~~~~~l~-~~gi~v~~g~~~~~--~~~iRis~~--~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 274 SSEANF-VLVENAA---------GERTLRFLR-ERGIQVKDAGQFGL--HHHIRISIG--REEDNDRLLAALAEYS 334 (337)
T ss_dssp CCSSSE-EEEECTT---------THHHHHHHH-HTTEECEEGGGGTC--CSEEEEECC--CHHHHHHHHHHHHHHT
T ss_pred CCCCeE-EEEEcCC---------HHHHHHHHH-HCCeEEEECccCCC--CCeEEEecC--CHHHHHHHHHHHHHHh
Confidence 888775 4555553 345666665 48999999999875 689999998 5678788777777654
No 69
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.78 E-value=2.9e-18 Score=128.12 Aligned_cols=132 Identities=14% Similarity=0.172 Sum_probs=110.8
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIECA 80 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 80 (163)
.||+||+|+||+++ ++++++.+......+++|.+.|.++..+|++. +++++.++.++++++++.+.|+++|+++.
T Consensus 203 ~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 277 (335)
T 1uu1_A 203 AFSLAAQRVGYVVA-SEKFIDAYNRVRLPFNVSYVSQMFAKVALDHR----EIFEERTKFIVEERERMKSALREMGYRIT 277 (335)
T ss_dssp TTTCGGGCCEEEEE-CHHHHHHHHHHSCTTCSCHHHHHHHHHHHHTH----HHHHHHHHHHHHHHHHHHHHHHHHTCCBC
T ss_pred hcCCcccCeEEEEe-CHHHHHHHHHhcCCCCcCHHHHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHHHHHHCCcEEc
Confidence 37899999999999 99999999887777789999999999999874 46778888999999999999998888765
Q ss_pred cCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHH
Q 042816 81 KSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRI 155 (163)
Q Consensus 81 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~ 155 (163)
|.+|+|+|++++. . +..++.+.|.+ +||.+.| .++++|||++. .+++++++++|.++
T Consensus 278 -~~~~~~~~~~~~~-~------~~~~~~~~l~~-~gi~v~~-------~~~~iRis~~~--~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 278 -DSRGNFVFVFMEK-E------EKERLLEHLRT-KNVAVRS-------FREGVRITIGK--REENDMILRELEVF 334 (335)
T ss_dssp -CCCSSEEEEECCT-H------HHHHHHHHHHH-HTEEEEE-------ETTEEEEECCC--HHHHHHHHHHHHCC
T ss_pred -CCCCeEEEEECCC-C------CHHHHHHHHHH-CCEEEEE-------CCCeEEEEeCC--HHHHHHHHHHHHhh
Confidence 4567789999975 2 67889998886 8999998 25799999974 56788888888653
No 70
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.77 E-value=6.9e-18 Score=127.28 Aligned_cols=137 Identities=16% Similarity=0.217 Sum_probs=118.2
Q ss_pred CCCceeEEEEEecCHHHHHHHHHhhcccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcccc
Q 042816 3 SLPGFRISVIYSYNNSVLAAAKKLARFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL-GIECAK 81 (163)
Q Consensus 3 ~~~G~RiG~~i~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~ 81 (163)
+++|+|+||+++ ++++++.+......+++|.+.|.++..+|++ .+++++.++.++++++.+.+.|+++ |+++.
T Consensus 229 ~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~- 302 (367)
T 3euc_A 229 GLAGIRLGYVAG-DPQWLEQLDKVRPPYNVNVLTEATALFALEH----VAVLDEQAAQLRAERSRVAEGMAAHGGVTVF- 302 (367)
T ss_dssp TSCSCCEEEEEE-CHHHHHHHGGGCCSSCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHHHHHTSTTCEEC-
T ss_pred cccccCceeeee-CHHHHHHHHHhCCCCCCCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-
Confidence 789999999999 9999999988887788999999999999998 3667889999999999999999998 88865
Q ss_pred CCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHH
Q 042816 82 SNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQ 157 (163)
Q Consensus 82 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~ 157 (163)
+.+|+|+|++++ +..++.+.|.+ +||.+.||..|+...++++||+++ +.++++++++.|.++++
T Consensus 303 ~~~~~~~~~~~~---------~~~~l~~~l~~-~gi~v~~~~~~~~~~~~~iRis~~--~~~~i~~~~~~l~~~l~ 366 (367)
T 3euc_A 303 PSAANFLLARVP---------DAAQTFDRLLA-RKVLIKNVSKMHPLLANCLRVTVS--TPEENAQFLEAFAASLQ 366 (367)
T ss_dssp CCSSSEEEEECS---------CHHHHHHHHHT-TTEECEECGGGCGGGTTEEEEECC--CHHHHHHHHHHHHHHTC
T ss_pred CCCCeEEEEECC---------CHHHHHHHHHH-CCeEEEECCccCCCCCCEEEEecC--CHHHHHHHHHHHHHHhc
Confidence 556778899987 35778887765 899999999887555789999988 77899999999988753
No 71
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.76 E-value=6.4e-18 Score=129.41 Aligned_cols=135 Identities=15% Similarity=0.236 Sum_probs=109.5
Q ss_pred CCCCCceeEEEE--EecCHH----HHHHHHHhhc--ccCCChHHHHHHHHhcCChHHH---HHHHHHHHHHHHHHHHHHH
Q 042816 1 DLSLPGFRISVI--YSYNNS----VLAAAKKLAR--FSSVSAPSQNLLVSMLSDTKFV---QKFININRERLRRLYVKFV 69 (163)
Q Consensus 1 ~~~~~G~RiG~~--i~~~~~----~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~l~ 69 (163)
+||+||+|+||+ ++++++ +++.+..... ..+++.+.|.++..+|+++.+. .+++++.++.++++++++.
T Consensus 259 ~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 338 (409)
T 4eu1_A 259 NFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLV 338 (409)
T ss_dssp TSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 478999999997 554777 6666666544 3567899999999999986421 4557899999999999999
Q ss_pred HHhhhcC----CccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHH
Q 042816 70 AGLRQLG----IECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDI 145 (163)
Q Consensus 70 ~~l~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l 145 (163)
+.|+++| +++..|++|+|+|++++ .+++..+++++||.+.|| .||+++..+.+++
T Consensus 339 ~~L~~~g~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ll~~~gv~v~p~----------~Ri~~~~~~~~~i 397 (409)
T 4eu1_A 339 SELKACGSVHDWSHIERQVGMMAYTGLT-----------REQVELLRSEYHIYMTLN----------GRAAVSGLNSTNV 397 (409)
T ss_dssp HHHHHTTCCSCCHHHHHSCSSEEECCCC-----------HHHHHHHHHHHCEECCTT----------CEEEGGGCCTTTH
T ss_pred HHHHhcCCCCCcceecCCceEEEEeCCC-----------HHHHHHHHHcCCEEEcCC----------CEEEEEecCHhhH
Confidence 9999986 88889999999997665 245667777689999986 3899987788889
Q ss_pred HHHHHHHHHHH
Q 042816 146 HVVMERIRRIS 156 (163)
Q Consensus 146 ~~~~~~l~~~~ 156 (163)
+.+++.|.+++
T Consensus 398 ~~~~~~l~~~l 408 (409)
T 4eu1_A 398 EYVSQAIHNVT 408 (409)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998775
No 72
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.75 E-value=3.1e-17 Score=124.04 Aligned_cols=135 Identities=16% Similarity=0.172 Sum_probs=113.6
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIECA 80 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 80 (163)
.||+||+|+||+++ ++++++.+......+++|.+.|.++..++++. +++++.++.++++++.+.+.|++.|+++.
T Consensus 232 ~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 306 (369)
T 3cq5_A 232 AFDFAGGRLGYFVA-NPAFIDAVMLVRLPYHLSALSQAAAIVALRHS----ADTLGTVEKLSVERVRVAARLEELGYAVV 306 (369)
T ss_dssp TTSCGGGCCEEEEE-CTHHHHHHHTTSCTTCSCHHHHHHHHHHHHTH----HHHHTHHHHHHHHHHHHHHHHHHHTCEEE
T ss_pred hcCCcccceEEEEe-CHHHHHHHHHcCCCCCCCHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHHHHHHhCCCEEC
Confidence 37889999999999 88999999887777789999999999999874 56788899999999999999988888887
Q ss_pred cCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHH
Q 042816 81 KSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQ 157 (163)
Q Consensus 81 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~ 157 (163)
++ +|.|+|++++. +..++.+.|.+ +||.+.|| + .++++||+++ ++++++++++.|.++++
T Consensus 307 ~~-~~~~~~~~~~~--------~~~~l~~~l~~-~gi~v~~~---~--~~~~iRis~~--~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 307 PS-ESNFVFFGDFS--------DQHAAWQAFLD-RGVLIRDV---G--IAGHLRTTIG--VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp CC-SSSEEEEECCS--------SHHHHHHHHHH-TTEECBCC---S--CTTEEEEECC--CHHHHHHHHHHHHHHHT
T ss_pred CC-CCeEEEEECCC--------CHHHHHHHHHH-CCEEEEEC---C--CCCeEEEEeC--CHHHHHHHHHHHHHHHh
Confidence 55 45678888872 56888888865 89999998 2 2689999998 67889999999988764
No 73
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.75 E-value=1.6e-17 Score=128.88 Aligned_cols=140 Identities=17% Similarity=0.218 Sum_probs=113.1
Q ss_pred CCCCCceeEEEE--Ee--------cCH----HHHHHHHHhhc--ccCCChHHHHHHHHhcCChHHH---HHHHHHHHHHH
Q 042816 1 DLSLPGFRISVI--YS--------YNN----SVLAAAKKLAR--FSSVSAPSQNLLVSMLSDTKFV---QKFININRERL 61 (163)
Q Consensus 1 ~~~~~G~RiG~~--i~--------~~~----~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~~ 61 (163)
.||++|+|+||+ ++ +++ ++++.+..... ..+++.+.|.++..+|.++.+. .++++++++.+
T Consensus 278 ~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~ 357 (448)
T 3meb_A 278 NFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARI 357 (448)
T ss_dssp TSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 478999999998 65 456 66666666544 3468889999999999987431 35689999999
Q ss_pred HHHHHHHHHHhhhc---C------CccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCce
Q 042816 62 RRLYVKFVAGLRQL---G------IECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGW 132 (163)
Q Consensus 62 ~~~~~~l~~~l~~~---g------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~ 132 (163)
+++++++.+.|+++ + +++..|++|+|+|+.++ .+++..|++++||.+.||+
T Consensus 358 ~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----------~~~~~~ll~~~gV~v~~G~--------- 417 (448)
T 3meb_A 358 HRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGLT-----------PEHVDYLKEKWSIYLVKAG--------- 417 (448)
T ss_dssp HHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCCC-----------HHHHHHHHHHHCEEECSGG---------
T ss_pred HHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecCCC-----------HHHHHHHHHhCCEEEeCCC---------
Confidence 99999999999987 4 66778999999998875 3566677777899999986
Q ss_pred EEEEEecCChhHHHHHHHHHHHHHHHhh
Q 042816 133 FSFSFTLLTEKDIHVVMERIRRISQTCK 160 (163)
Q Consensus 133 iRi~~~~~~~~~l~~~~~~l~~~~~~~~ 160 (163)
.|||++..+.+++++++++|.++++++.
T Consensus 418 gRis~a~~~~~~i~~~~~~l~~~l~~~~ 445 (448)
T 3meb_A 418 GRMSMCGLTESNCDYVAEAIHDAVTKLP 445 (448)
T ss_dssp GEEEGGGCCTTTHHHHHHHHHHHHHHSC
T ss_pred cEEEEecCCHHHHHHHHHHHHHHHHhcc
Confidence 2999987678889999999999988653
No 74
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.75 E-value=1.2e-17 Score=128.82 Aligned_cols=139 Identities=15% Similarity=0.184 Sum_probs=104.6
Q ss_pred CCCCCceeEEEEEecC--HH----HHHHHHHhhc--ccCCChHHHHHHHHhcCChHHH---HHHHHHHHHHHHHHHHHHH
Q 042816 1 DLSLPGFRISVIYSYN--NS----VLAAAKKLAR--FSSVSAPSQNLLVSMLSDTKFV---QKFININRERLRRLYVKFV 69 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~--~~----~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~l~ 69 (163)
+|+++|+|+||+++++ .+ +...+..... .++++...|.++..++.++... .++++.+++.|+++++.+.
T Consensus 266 ~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~ 345 (420)
T 4h51_A 266 NMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVY 345 (420)
T ss_dssp TSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999999999832 12 2222222222 3578889999999999986421 5678899999999999999
Q ss_pred HHhhhcC----CccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHH
Q 042816 70 AGLRQLG----IECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDI 145 (163)
Q Consensus 70 ~~l~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l 145 (163)
+.|++.| +.+..+++|||.|+.+.+ +.++.| +++||+++||. |||++.++.+++
T Consensus 346 ~~L~~~g~~~~~~~i~~q~GmF~~~gls~-----------e~v~~L-~e~~Vy~~~~g----------Ris~Agl~~~ni 403 (420)
T 4h51_A 346 DELLRLQTPGSWEHVINQIGMFSFLGLSK-----------AQCEYC-QNHNIFITVSG----------RANMAGLTHETA 403 (420)
T ss_dssp HHHHHTTCSSCCTHHHHCCSSEEECCCCH-----------HHHHHH-HHTTEECCTTC----------EEEGGGCCHHHH
T ss_pred HHHHHhCCCCCCCeecCCCceEEecCcCH-----------HHHHHH-HhCCEEEcCCC----------EEEeccCCHHHH
Confidence 9999984 556778999999976652 234545 55999998852 999998899999
Q ss_pred HHHHHHHHHHHHHhhh
Q 042816 146 HVVMERIRRISQTCKS 161 (163)
Q Consensus 146 ~~~~~~l~~~~~~~~~ 161 (163)
+.+.++|.+++++..+
T Consensus 404 ~~~a~aI~~vvr~i~r 419 (420)
T 4h51_A 404 LMLAQTINDAVRNVNR 419 (420)
T ss_dssp HHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHhhc
Confidence 9999999999987654
No 75
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.73 E-value=5e-17 Score=123.97 Aligned_cols=135 Identities=15% Similarity=0.220 Sum_probs=106.5
Q ss_pred CCCCCceeEEEEEe--cCHH----HHHHHHHhhcc--cCCChHHHHHHHHhcCChHHH---HHHHHHHHHHHHHHHHHHH
Q 042816 1 DLSLPGFRISVIYS--YNNS----VLAAAKKLARF--SSVSAPSQNLLVSMLSDTKFV---QKFININRERLRRLYVKFV 69 (163)
Q Consensus 1 ~~~~~G~RiG~~i~--~~~~----~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~l~ 69 (163)
+||+||+|+||+++ .+++ +.+.+...... .+++.+.|.+++.+++++.+. .++++++++.++++++++.
T Consensus 251 ~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~ 330 (401)
T 7aat_A 251 NMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLV 330 (401)
T ss_dssp TSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47999999999886 2555 55555555442 567788899898889886431 4668899999999999999
Q ss_pred HHhhhcC----CccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHH
Q 042816 70 AGLRQLG----IECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDI 145 (163)
Q Consensus 70 ~~l~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l 145 (163)
+.|+++| +++..|++|+|+|++++ .++...+++++||.+.|+ +|||++..+.+++
T Consensus 331 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ll~~~gi~v~~~----------~Ris~~~~~~~~i 389 (401)
T 7aat_A 331 SNLKKEGSSHNWQHITDQIGMFCFTGLK-----------PEQVERLTKEFSIYMTKD----------GRISVAGVASSNV 389 (401)
T ss_dssp HHHHHTTCCSCCHHHHHCCSSEEECCCC-----------HHHHHHHHHHHCEECCTT----------CEEEGGGCCTTTH
T ss_pred HHHHhcCCCCCCceecCCcceEEecCCC-----------HHHHHHHHHhCCEeccCC----------CeEEeccCChhhH
Confidence 9999875 77888999999998765 233456767689999864 6999987677889
Q ss_pred HHHHHHHHHHH
Q 042816 146 HVVMERIRRIS 156 (163)
Q Consensus 146 ~~~~~~l~~~~ 156 (163)
+.+++.|.+++
T Consensus 390 ~~~~~~l~~~~ 400 (401)
T 7aat_A 390 GYLAHAIHQVT 400 (401)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998875
No 76
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.72 E-value=9.3e-17 Score=123.43 Aligned_cols=135 Identities=16% Similarity=0.288 Sum_probs=106.2
Q ss_pred CCCCCceeEEEEEe--cCHHHHHHH----HHhhc--ccCCChHHHHHHHHhcCChHH---HHHHHHHHHHHHHHHHHHHH
Q 042816 1 DLSLPGFRISVIYS--YNNSVLAAA----KKLAR--FSSVSAPSQNLLVSMLSDTKF---VQKFININRERLRRLYVKFV 69 (163)
Q Consensus 1 ~~~~~G~RiG~~i~--~~~~~~~~~----~~~~~--~~~~s~~~q~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~l~ 69 (163)
.||+||+|+||+++ +++++++.+ ..... ..+++.+.|.++..++.++.+ .+++++++++.|+++++++.
T Consensus 270 ~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 349 (420)
T 4f4e_A 270 SFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLV 349 (420)
T ss_dssp TTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999864 356766543 22222 346788999999999988642 15778999999999999999
Q ss_pred HHhhhc----CCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHH
Q 042816 70 AGLRQL----GIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDI 145 (163)
Q Consensus 70 ~~l~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l 145 (163)
+.|+++ |+++..|++|+|+|++++. ..+ ..+++++||.+.|+ .|||++..+++++
T Consensus 350 ~~L~~~~~~~~~~~~~~~~g~~~~~~~~~----------~~~-~~~l~~~gI~v~~~----------~Ris~~~~~~~~i 408 (420)
T 4f4e_A 350 ERLKAAGIERDFSFINAQRGMFSYSGLTS----------AQV-DRLREEFGIYAVST----------GRICVAALNTRNL 408 (420)
T ss_dssp HHHHHTTCSSCCTHHHHSCSSEEECCCCH----------HHH-HHHHHHHCEECCTT----------SEEEGGGCCTTTH
T ss_pred HHHHhcCCCCCceeECCCccEEEEeCCCH----------HHH-HHHHHhCCEEecCC----------CeEEEecCCHHHH
Confidence 999987 6889999999999988752 334 44555689999985 2999987678889
Q ss_pred HHHHHHHHHHH
Q 042816 146 HVVMERIRRIS 156 (163)
Q Consensus 146 ~~~~~~l~~~~ 156 (163)
++++++|.+++
T Consensus 409 ~~~~~~l~~~l 419 (420)
T 4f4e_A 409 DVVANAIAAVL 419 (420)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998875
No 77
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.72 E-value=1.1e-16 Score=122.38 Aligned_cols=138 Identities=17% Similarity=0.235 Sum_probs=109.6
Q ss_pred CCCCCceeEEEEEe--cCHH----HHHHHHHhhc-cc-CCChHHHHHHHHhcCChHHH---HHHHHHHHHHHHHHHHHHH
Q 042816 1 DLSLPGFRISVIYS--YNNS----VLAAAKKLAR-FS-SVSAPSQNLLVSMLSDTKFV---QKFININRERLRRLYVKFV 69 (163)
Q Consensus 1 ~~~~~G~RiG~~i~--~~~~----~~~~~~~~~~-~~-~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~l~ 69 (163)
.||++|+|+||+++ .+++ +++.+..... .+ +++.+.|.++..+|++..+. ++++++.++.++++++++.
T Consensus 259 ~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 338 (412)
T 1ajs_A 259 NFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELR 338 (412)
T ss_dssp TSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCcceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 47889999999998 3566 5555555332 33 46999999999999887411 4678999999999999999
Q ss_pred HHhhhcC----CccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHH
Q 042816 70 AGLRQLG----IECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDI 145 (163)
Q Consensus 70 ~~l~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l 145 (163)
+.|++++ +++..|++|+|+|++++ .++...+++++||.+.|+ +||+++..+++++
T Consensus 339 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~gv~v~~~----------~Ris~~~~~~~~i 397 (412)
T 1ajs_A 339 ARLEALKTPGTWNHITDQIGMFSFTGLN-----------PKQVEYLINQKHIYLLPS----------GRINMCGLTTKNL 397 (412)
T ss_dssp HHHHHTTCSSCCHHHHHCCSSEEECCCC-----------HHHHHHHHHTTCEECCTT----------SEEEGGGCCTTTH
T ss_pred HHHHhhCCCCCeeEEcCCCceEEEeCCC-----------HHHHHHHHHhCCEEecCC----------cEEEeeeCCHHHH
Confidence 9999886 88888999999998764 234555666689999974 5999995588999
Q ss_pred HHHHHHHHHHHHHh
Q 042816 146 HVVMERIRRISQTC 159 (163)
Q Consensus 146 ~~~~~~l~~~~~~~ 159 (163)
++++++|.++++++
T Consensus 398 ~~~~~~l~~~l~~~ 411 (412)
T 1ajs_A 398 DYVATSIHEAVTKI 411 (412)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999988764
No 78
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.71 E-value=1.5e-16 Score=120.97 Aligned_cols=134 Identities=15% Similarity=0.185 Sum_probs=105.7
Q ss_pred CCCCCceeEEEEEe--cCHHHHHHHHHhh-----c-ccCCChHHHHHHHHhcCChHH---HHHHHHHHHHHHHHHHHHHH
Q 042816 1 DLSLPGFRISVIYS--YNNSVLAAAKKLA-----R-FSSVSAPSQNLLVSMLSDTKF---VQKFININRERLRRLYVKFV 69 (163)
Q Consensus 1 ~~~~~G~RiG~~i~--~~~~~~~~~~~~~-----~-~~~~s~~~q~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~l~ 69 (163)
.||+||+|+||+++ .++++++.+.... . ..+++.+.|.++..++.++.+ ..+++++.++.++++++++.
T Consensus 248 ~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 327 (397)
T 3fsl_A 248 IFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELV 327 (397)
T ss_dssp TTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999975 3667666543221 1 245688999999999998642 15778999999999999999
Q ss_pred HHhhhc----CCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHH
Q 042816 70 AGLRQL----GIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDI 145 (163)
Q Consensus 70 ~~l~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l 145 (163)
+.|+++ |+++..|++|+|+|++++. ..+. .+++++||.+.||. ||+++..+++++
T Consensus 328 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~l~~~gi~v~~g~----------Ris~~~~~~~~i 386 (397)
T 3fsl_A 328 KVLSTEMPERNFDYLLNQRGMFSYTGLSA----------AQVD-RLREEFGVYLIASG----------RMCVAGLNTANV 386 (397)
T ss_dssp HHHHHHCTTSCCTHHHHCCSSEEECCCCH----------HHHH-HHHHTTCEECCTTC----------EEEGGGCCTTTH
T ss_pred HHHHhcCCCCCceeecCCceEEEecCCCH----------HHHH-HHHHhCCEEECCCC----------eEEEEecCHhhH
Confidence 999987 6899999999999988752 3344 45556999999973 999987677889
Q ss_pred HHHHHHHHHH
Q 042816 146 HVVMERIRRI 155 (163)
Q Consensus 146 ~~~~~~l~~~ 155 (163)
++++++|.++
T Consensus 387 ~~~~~~l~~~ 396 (397)
T 3fsl_A 387 QRVAKAFAAV 396 (397)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999999875
No 79
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.71 E-value=8.2e-17 Score=123.27 Aligned_cols=138 Identities=15% Similarity=0.212 Sum_probs=110.9
Q ss_pred CCCCCceeEEEEE--e----cCHH----HHHHHHHhhc-c-cCCChHHHHHHHHhcCChHHH---HHHHHHHHHHHHHHH
Q 042816 1 DLSLPGFRISVIY--S----YNNS----VLAAAKKLAR-F-SSVSAPSQNLLVSMLSDTKFV---QKFININRERLRRLY 65 (163)
Q Consensus 1 ~~~~~G~RiG~~i--~----~~~~----~~~~~~~~~~-~-~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~~~~~~ 65 (163)
.||++|+|+||++ + .+++ +++.+..... . .+++.+.|.++..+|++..+. ++++++.++.+++++
T Consensus 255 ~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 334 (412)
T 1yaa_A 255 NAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMR 334 (412)
T ss_dssp TSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788899999998 5 2555 7887777433 2 456899999999999987421 468899999999999
Q ss_pred HHHHHHhhhcC----CccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCC
Q 042816 66 VKFVAGLRQLG----IECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLT 141 (163)
Q Consensus 66 ~~l~~~l~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~ 141 (163)
+++.+.|++++ +++..|++|+|+|++++ ...+ ..+++++||.+.| ++|||++..+
T Consensus 335 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~~l~~~gi~v~~----------~~Ris~~~~~ 393 (412)
T 1yaa_A 335 HALRDHLVKLGTPGNWDHIVNQCGMFSFTGLT----------PQMV-KRLEETHAVYLVA----------SGRASIAGLN 393 (412)
T ss_dssp HHHHHHHHHHTCSSCCTHHHHCCSSEEECCCC----------HHHH-HHHHHHHCEECCT----------TSEEEGGGCC
T ss_pred HHHHHHHHhhCCCCCeeeeccCceEEEeeCCC----------HHHH-HHHHHhCCEEecc----------CcEEEEccCC
Confidence 99999999886 88889999999998664 2345 5566668999987 4799998668
Q ss_pred hhHHHHHHHHHHHHHHHh
Q 042816 142 EKDIHVVMERIRRISQTC 159 (163)
Q Consensus 142 ~~~l~~~~~~l~~~~~~~ 159 (163)
+++++++++.|.++++.+
T Consensus 394 ~~~i~~~~~~l~~~~~~~ 411 (412)
T 1yaa_A 394 QGNVEYVAKAIDEVVRFY 411 (412)
T ss_dssp TTTHHHHHHHHHHHHHHC
T ss_pred HhHHHHHHHHHHHHHHhh
Confidence 899999999999987653
No 80
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.71 E-value=8.9e-17 Score=122.25 Aligned_cols=133 Identities=16% Similarity=0.233 Sum_probs=104.5
Q ss_pred CCCCCceeEEEEEe--cCH----HHHHHHHHhhc-c-cCCChHHHHHHHHhcCCh----HHHHHHHHHHHHHHHHHHHHH
Q 042816 1 DLSLPGFRISVIYS--YNN----SVLAAAKKLAR-F-SSVSAPSQNLLVSMLSDT----KFVQKFININRERLRRLYVKF 68 (163)
Q Consensus 1 ~~~~~G~RiG~~i~--~~~----~~~~~~~~~~~-~-~~~s~~~q~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~l 68 (163)
.||+||+|+||+++ +++ ++++.+..... . .+++.+.|.++..+|++. .+ ++++++.++.++++++++
T Consensus 247 ~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~-~~~~~~~~~~~~~~~~~l 325 (396)
T 2q7w_A 247 NFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIW-EQELTDMRQRIQRMRQLF 325 (396)
T ss_dssp TTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHH-HHHHHHC-CHHHHHHHHH
T ss_pred cccccccccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHH-HHHHHHHHHHHHHHHHHH
Confidence 47899999999996 355 45555554332 2 356999999999999986 33 578899999999999999
Q ss_pred HHHhhhcC----CccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhH
Q 042816 69 VAGLRQLG----IECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKD 144 (163)
Q Consensus 69 ~~~l~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~ 144 (163)
.+.|++++ +++.+|++|+|+|++++ ... ...+++++||.+.|| +||+++..++++
T Consensus 326 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~-~~~~l~~~gv~v~~~----------~Ris~~~~~~e~ 384 (396)
T 2q7w_A 326 VNTLQEKGANRDFSFIIKQNGMFSFSGLT----------KEQ-VLRLREEFGVYAVAS----------GRVNVAGMTPDN 384 (396)
T ss_dssp HHHHHHTTCCSCCTHHHHCCSSEEECCCC----------HHH-HHHHHHHHCEECCTT----------CEEEGGGCCTTT
T ss_pred HHHHHhcCCCCCcceecCCCceEEEecCC----------HHH-HHHHHHhcCeeecCC----------ceEEEeecCHHH
Confidence 99999986 88888999999998765 133 444555589999984 699998658899
Q ss_pred HHHHHHHHHHH
Q 042816 145 IHVVMERIRRI 155 (163)
Q Consensus 145 l~~~~~~l~~~ 155 (163)
+++++++|.++
T Consensus 385 i~~~~~~l~~~ 395 (396)
T 2q7w_A 385 MAPLCEAIVAV 395 (396)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 99999999875
No 81
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.67 E-value=6.3e-16 Score=117.54 Aligned_cols=134 Identities=12% Similarity=0.164 Sum_probs=103.6
Q ss_pred CCCCCceeEEEEEe--cCHHHHHHH----HHhhc--ccCCChHHHHHHHHhcCChH---HHHHHHHHHHHHHHHHHHHHH
Q 042816 1 DLSLPGFRISVIYS--YNNSVLAAA----KKLAR--FSSVSAPSQNLLVSMLSDTK---FVQKFININRERLRRLYVKFV 69 (163)
Q Consensus 1 ~~~~~G~RiG~~i~--~~~~~~~~~----~~~~~--~~~~s~~~q~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~l~ 69 (163)
.||+||+|+||+++ +++++++.+ ..... ..+++++.|.++..+|++.. .+++++++.++.++++++++.
T Consensus 244 ~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 323 (394)
T 2ay1_A 244 NFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLA 323 (394)
T ss_dssp TTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47889999999997 466654443 32222 23568999999999998762 125688999999999999999
Q ss_pred HHhhhcC----CccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHH
Q 042816 70 AGLRQLG----IECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDI 145 (163)
Q Consensus 70 ~~l~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l 145 (163)
+.|++++ +++..|++|+|+|++++. ..+. .+++++||.+.|| +||+++..+++++
T Consensus 324 ~~L~~~~~~~~~~~~~~~~g~~~~~~~~~----------~~~~-~~l~~~gi~v~~~----------~Ris~~~~~~~~i 382 (394)
T 2ay1_A 324 GELRDLSGSDRFGFVAEHRGMFSRLGATP----------EQVK-RIKEEFGIYMVGD----------SRINIAGLNDNTI 382 (394)
T ss_dssp HHHHHHHTSSTTTHHHHCCSSEEECCCCH----------HHHH-HHHHHHCEECCTT----------CEEEGGGCCTTTH
T ss_pred HHHHhcCCCCCeeEEcCCceEEEeeCCCH----------HHHH-HHHHhCCEEecCC----------CeEEeecCCHhhH
Confidence 9999874 888888999999988752 3444 4555589999884 5999986688999
Q ss_pred HHHHHHHHHH
Q 042816 146 HVVMERIRRI 155 (163)
Q Consensus 146 ~~~~~~l~~~ 155 (163)
++++++|.++
T Consensus 383 ~~~~~~l~~~ 392 (394)
T 2ay1_A 383 PILARAIIEV 392 (394)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 9999998875
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.66 E-value=2.1e-15 Score=114.90 Aligned_cols=144 Identities=17% Similarity=0.104 Sum_probs=115.1
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhh-c--ccCCChHHHH-HHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLA-R--FSSVSAPSQN-LLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLG 76 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~-~--~~~~s~~~q~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 76 (163)
.||++| ||+++ ++++++.+.... . ..+++.+.|. ++..+|++. +++++.++.++++++++.+.|+++|
T Consensus 244 ~~~~~G---G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~~g 315 (398)
T 3a2b_A 244 SLASLG---GFVAG-DADVIDFLKHNARSVMFSASMTPASVASTLKALEII----QNEPEHIEKLWKNTDYAKAQLLDHG 315 (398)
T ss_dssp TTCSSC---EEEEE-CHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHH----HHCTHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccCCC---cEEEe-CHHHHHHHHHhcccceecCCCCHHHHHHHHHHHHHH----hhCHHHHHHHHHHHHHHHHHHHhcC
Confidence 367778 99999 899999988753 2 2456677776 455777542 3567889999999999999999988
Q ss_pred CccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCC-CCceEEEEEec-CChhHHHHHHHHHHH
Q 042816 77 IECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCI-EPGWFSFSFTL-LTEKDIHVVMERIRR 154 (163)
Q Consensus 77 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~-~~~~iRi~~~~-~~~~~l~~~~~~l~~ 154 (163)
+++.+|. |+++|++++... +..++++.|++ +||.+.||..|..+ +++++||+++. .+++++++++++|.+
T Consensus 316 ~~~~~~~-g~~~~~~~~~~~------~~~~l~~~l~~-~gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~ 387 (398)
T 3a2b_A 316 FDLGATE-SPILPIFIRSNE------KTFWVTKMLQD-DGVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVK 387 (398)
T ss_dssp CCBCSCC-SSEEEEECCCHH------HHHHHHHHHHH-TTEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred CCcCCCC-CCEEEEEcCCHH------HHHHHHHHHHH-CCcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHH
Confidence 8887776 578999997532 67889999987 69999999888643 36899999985 488999999999999
Q ss_pred HHHHhh
Q 042816 155 ISQTCK 160 (163)
Q Consensus 155 ~~~~~~ 160 (163)
+++++.
T Consensus 388 ~l~~~~ 393 (398)
T 3a2b_A 388 VFKQAE 393 (398)
T ss_dssp HHHHCC
T ss_pred HHHHhC
Confidence 988754
No 83
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.61 E-value=1.5e-14 Score=109.84 Aligned_cols=143 Identities=13% Similarity=0.088 Sum_probs=111.9
Q ss_pred ceeEEEEEecCHHHHHHHHHhhcc----cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcccc
Q 042816 6 GFRISVIYSYNNSVLAAAKKLARF----SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIECAK 81 (163)
Q Consensus 6 G~RiG~~i~~~~~~~~~~~~~~~~----~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~ 81 (163)
|++.||+++ ++++++.+...... .+.+.+.+.++...++.. .++.++.++.++++++++.+.|+++|+++.+
T Consensus 249 g~~gG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 324 (399)
T 3tqx_A 249 GASGGYTSG-HKEIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELL---KTEGPQLRKQLQENSRYFRAGMEKLGFQLVP 324 (399)
T ss_dssp SSCCEEEEE-CHHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHH---HHTHHHHHHHHHHHHHHHHHHHHHHTCCBCC
T ss_pred cCceEEEEc-CHHHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHH---hhccHHHHHHHHHHHHHHHHHHHHcCCCcCC
Confidence 455599999 99999999876442 246666666666666543 3667899999999999999999999988886
Q ss_pred CCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCC-CCCCceEEEEEe-cCChhHHHHHHHHHHHHHHHh
Q 042816 82 SNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCH-CIEPGWFSFSFT-LLTEKDIHVVMERIRRISQTC 159 (163)
Q Consensus 82 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~-~~~~~~iRi~~~-~~~~~~l~~~~~~l~~~~~~~ 159 (163)
+.++ ++|+.++... +..++++.|++ +||.+.|+..+. ..+++++||+++ ..+++++++++++|.++++++
T Consensus 325 ~~~~-~~~~~~~~~~------~~~~~~~~l~~-~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 325 GNHP-IIPVMLGDAQ------LATNMADHLLQ-EGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp CSSS-EEEEEEECHH------HHHHHHHHHHH-TTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred CCCC-EEEEEeCCHH------HHHHHHHHHHH-CCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHh
Confidence 6655 5777887542 67899999987 899999876554 234689999997 348899999999999999876
Q ss_pred h
Q 042816 160 K 160 (163)
Q Consensus 160 ~ 160 (163)
.
T Consensus 397 ~ 397 (399)
T 3tqx_A 397 G 397 (399)
T ss_dssp T
T ss_pred c
Confidence 4
No 84
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.61 E-value=1.6e-14 Score=109.99 Aligned_cols=144 Identities=13% Similarity=0.051 Sum_probs=114.2
Q ss_pred CCCceeEEEEEecCHHHHHHHHHhhc----ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 042816 3 SLPGFRISVIYSYNNSVLAAAKKLAR----FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIE 78 (163)
Q Consensus 3 ~~~G~RiG~~i~~~~~~~~~~~~~~~----~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 78 (163)
|.+| ||+++ ++++++.+..... ..+++.+.|.++...++.. +. .++.++.++++++++.+.|+++|++
T Consensus 251 ~~~g---G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~-~~~~~~~~~~~~~~l~~~L~~~g~~ 322 (401)
T 1fc4_A 251 GASG---GYTAA-RKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMV---EA-GSELRDRLWANARQFREQMSAAGFT 322 (401)
T ss_dssp SSSC---EEEEE-CHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHH---HT-CHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCC---EEEEc-CHHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHH---hc-CHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 4454 99999 9999999887653 2367888898888777643 22 4677888999999999999988888
Q ss_pred cccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCC-CCceEEEEEec-CChhHHHHHHHHHHHHH
Q 042816 79 CAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCI-EPGWFSFSFTL-LTEKDIHVVMERIRRIS 156 (163)
Q Consensus 79 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~-~~~~iRi~~~~-~~~~~l~~~~~~l~~~~ 156 (163)
+. +..|.++|++++... +..++.+.|.+ +||.+.||..|+.+ .++++||+++. .+++++++++++|.+++
T Consensus 323 ~~-~~~~~~~~~~~~~~~------~~~~l~~~l~~-~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 394 (401)
T 1fc4_A 323 LA-GADHAIIPVMLGDAV------VAQKFARELQK-EGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIG 394 (401)
T ss_dssp BC-CSSSSEEEEEEECHH------HHHHHHHHHHH-TTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred cc-CCCCCEEEEEcCChH------HHHHHHHHHHH-CCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 77 566778899987532 67889998887 79999999877643 35799999983 38899999999999999
Q ss_pred HHhhhc
Q 042816 157 QTCKSH 162 (163)
Q Consensus 157 ~~~~~~ 162 (163)
++++.+
T Consensus 395 ~~~~~~ 400 (401)
T 1fc4_A 395 KQLGVI 400 (401)
T ss_dssp HHTTSC
T ss_pred HHhCCC
Confidence 887654
No 85
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.61 E-value=1.4e-14 Score=109.95 Aligned_cols=143 Identities=10% Similarity=0.074 Sum_probs=111.1
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhh--------------------c-cc-CCChHHHHHHHHhcCChHHHHHHHHHHHH
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLA--------------------R-FS-SVSAPSQNLLVSMLSDTKFVQKFININRE 59 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~--------------------~-~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~ 59 (163)
++.|| |+||+++ ++++++.+.... . .. +++.+.|.++..+++... +.++++.++
T Consensus 223 l~~~~-~~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~--~~~~~~~~~ 298 (393)
T 1vjo_A 223 LGCSP-GASPFTM-SSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIA--QEGLANCWQ 298 (393)
T ss_dssp TCSCS-SCEEEEE-CHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHH--HHCHHHHHH
T ss_pred ccCCC-ceEEEEE-CHHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHH--HccHHHHHH
Confidence 67788 9999999 899988875420 1 23 678888998888887531 345788999
Q ss_pred HHHHHHHHHHHHhhhcCCccccCCc---eeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEE
Q 042816 60 RLRRLYVKFVAGLRQLGIECAKSNG---GFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFS 136 (163)
Q Consensus 60 ~~~~~~~~l~~~l~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~ 136 (163)
.++++++++.+.|++.|+++..|++ +.++|+.+|... +..++++.|.+++||.+.||+.|.. ++++||+
T Consensus 299 ~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis 370 (393)
T 1vjo_A 299 RHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCIPDGV------DGKAVARRLLNEHNIEVGGGLGELA--GKVWRVG 370 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCTTC------CHHHHHHHHHHHHCEECEECCGGGT--TTEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCcccCCccccCCcEEEEEcCCCC------CHHHHHHHHHhhCCEEEecCccccC--CCEEEEe
Confidence 9999999999999988888887765 346777876432 6788999888745999999997753 6899999
Q ss_pred E-ec-CChhHHHHHHHHHHHHH
Q 042816 137 F-TL-LTEKDIHVVMERIRRIS 156 (163)
Q Consensus 137 ~-~~-~~~~~l~~~~~~l~~~~ 156 (163)
+ +. .+++++++++++|.+++
T Consensus 371 ~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 371 LMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp CCGGGCSHHHHHHHHHHHHHHH
T ss_pred CCccCChHHHHHHHHHHHHHHh
Confidence 4 32 26667999999998875
No 86
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.59 E-value=4.9e-14 Score=106.49 Aligned_cols=146 Identities=14% Similarity=0.130 Sum_probs=114.3
Q ss_pred CCCCceeEEEEEecCHHHHHHHH----------------Hh----hcccCCChHHHHHHHHhcCChHHHHHH--HHHHHH
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAK----------------KL----ARFSSVSAPSQNLLVSMLSDTKFVQKF--ININRE 59 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~----------------~~----~~~~~~s~~~q~~~~~~l~~~~~~~~~--~~~~~~ 59 (163)
|+.|+ ++||+++ ++++++.+. .. ....+++.+.|.++..+++.- .++ +++.++
T Consensus 210 ~~~~~-g~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~g~~~~~~~ 284 (386)
T 2dr1_A 210 FGVPP-GLAIGAF-SERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRII---EKMGGKEKWLE 284 (386)
T ss_dssp TCCCS-SCEEEEE-CHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHH---HHTTCHHHHHH
T ss_pred ccCCC-ceEEEEE-CHHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH---HHhcCHHHHHH
Confidence 55552 4999999 888887762 22 113567888898888887653 333 678899
Q ss_pred HHHHHHHHHHHHhhhcCCccccCC---ceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEE
Q 042816 60 RLRRLYVKFVAGLRQLGIECAKSN---GGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFS 136 (163)
Q Consensus 60 ~~~~~~~~l~~~l~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~ 136 (163)
.++++++++.+.|+++|+++..|+ .+.++|++++... +..++++.|.+ +||.+.||..+. .++++||+
T Consensus 285 ~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~-~gi~v~~~~~~~--~~~~iRi~ 355 (386)
T 2dr1_A 285 MYEKRAKMVREGVREIGLDILAEPGHESPTITAVLTPPGI------KGDEVYEAMRK-RGFELAKGYGSV--KEKTFRIG 355 (386)
T ss_dssp HHHHHHHHHHHHHHHTTCCBSSCTTCBCSSEEEEECCTTC------CHHHHHHHHHH-TTEECEECCGGG--TTTEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCeeCcCccccCCceEEEEcCCCC------CHHHHHHHHHH-CCeEEecCcccc--CCCEEEEE
Confidence 999999999999998888887775 3778899987532 67889999987 699999998654 26799999
Q ss_pred Eec-CChhHHHHHHHHHHHHHHHhhh
Q 042816 137 FTL-LTEKDIHVVMERIRRISQTCKS 161 (163)
Q Consensus 137 ~~~-~~~~~l~~~~~~l~~~~~~~~~ 161 (163)
++. .+++++++++++|.++++++..
T Consensus 356 ~~~~~~~~~i~~~~~~l~~~~~~~~~ 381 (386)
T 2dr1_A 356 HMGYMKFEDIQEMLDNLREVINELKK 381 (386)
T ss_dssp CCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 984 4889999999999999887653
No 87
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.57 E-value=1e-13 Score=105.66 Aligned_cols=143 Identities=8% Similarity=0.022 Sum_probs=108.3
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhh----------------------c-ccCCChHHHHHHHHhcCChHHHHHH--HHH
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLA----------------------R-FSSVSAPSQNLLVSMLSDTKFVQKF--INI 56 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~----------------------~-~~~~s~~~q~~~~~~l~~~~~~~~~--~~~ 56 (163)
||++| ++||+++ ++++++.+.+.. . +.+++...+.++..+++.- .+. +++
T Consensus 224 ~~~~g-g~g~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~---~~~g~~~~ 298 (398)
T 2fyf_A 224 FASDG-GLWLAIM-SPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWL---VGNGGLDW 298 (398)
T ss_dssp TCSCS-SEEEEEE-CHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHH---HHHTSHHH
T ss_pred cCCCC-ceEEEEE-CHHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHH---HHccCHHH
Confidence 67776 6999999 899888775321 1 2346666777777777532 333 788
Q ss_pred HHHHHHHHHHHHHHHhhhc-CCcccc--C--CceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCc
Q 042816 57 NRERLRRLYVKFVAGLRQL-GIECAK--S--NGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPG 131 (163)
Q Consensus 57 ~~~~~~~~~~~l~~~l~~~-g~~~~~--~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~ 131 (163)
.++.++++++++.+.|+++ |+++.. | .+++++|+++|..+ +..++.+.|.+ +||.+.||. ...+++
T Consensus 299 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~L~~-~gI~v~~g~--~~~~~~ 369 (398)
T 2fyf_A 299 AVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVDDV------DAGTVAKILRA-NGIVDTEPY--RKLGRN 369 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECTTS------CHHHHHHHHHH-TTCBCCSCC--TTTCSS
T ss_pred HHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEECCCCC------CHHHHHHHHHH-CCcEEecCc--ccCCCC
Confidence 8999999999999999998 887763 4 45668999997543 67889998887 699999873 222368
Q ss_pred eEEEEEec-CChhHHHHHHHHHHHHHHH
Q 042816 132 WFSFSFTL-LTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 132 ~iRi~~~~-~~~~~l~~~~~~l~~~~~~ 158 (163)
++||+++. .++++++.+++.|.+++++
T Consensus 370 ~iRis~~~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 370 QLRVAMFPAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 99999983 3789999999999988764
No 88
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.56 E-value=1e-13 Score=105.56 Aligned_cols=147 Identities=14% Similarity=0.008 Sum_probs=109.5
Q ss_pred CCCceeEEEEEecC-HHHHHHHHHhhccc--CCChHHHH-HHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 042816 3 SLPGFRISVIYSYN-NSVLAAAKKLARFS--SVSAPSQN-LLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIE 78 (163)
Q Consensus 3 ~~~G~RiG~~i~~~-~~~~~~~~~~~~~~--~~s~~~q~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 78 (163)
+++|.|+||+++ + +++++.+......+ +...+.+. ++..+++... +.++++.++.++++++++.+.|++.|++
T Consensus 227 ~l~g~~~G~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 303 (407)
T 2dkj_A 227 TLRGPRGGLILS-NDPELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEAL--QPEFKEYSRLVVENAKRLAEELARRGYR 303 (407)
T ss_dssp GGCCCSCEEEEE-SCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHH--SHHHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred cCCCCCceEEEE-CCHHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHhCCce
Confidence 467999999999 7 89999988776532 23333333 5555554421 3567888999999999999999988887
Q ss_pred ccc-CCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCC----CCCCCceEEEEEec-----CChhHHHHH
Q 042816 79 CAK-SNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSC----HCIEPGWFSFSFTL-----LTEKDIHVV 148 (163)
Q Consensus 79 ~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f----~~~~~~~iRi~~~~-----~~~~~l~~~ 148 (163)
+.. +.++.++|++++... .+..++.+.|.+ +||.+.||..| ....++++|++++. .++++++.+
T Consensus 304 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~-~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~ 377 (407)
T 2dkj_A 304 IVTGGTDNHLFLVDLRPKG-----LTGKEAEERLDA-VGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLV 377 (407)
T ss_dssp EGGGSCSSSEEEEECGGGT-----CCHHHHHHHHHH-TTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHH
T ss_pred eecCCCCceEEEEECcccC-----CCHHHHHHHHHH-cCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHH
Confidence 765 467888999997410 156788887765 89999999765 22236799999963 488999999
Q ss_pred HHHHHHHHHH
Q 042816 149 MERIRRISQT 158 (163)
Q Consensus 149 ~~~l~~~~~~ 158 (163)
+++|.+++++
T Consensus 378 ~~~l~~~~~~ 387 (407)
T 2dkj_A 378 AELIDRALLE 387 (407)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999998876
No 89
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.56 E-value=1.4e-13 Score=104.06 Aligned_cols=145 Identities=13% Similarity=0.085 Sum_probs=110.7
Q ss_pred eeEEEEEecCHHHHHHHHHhhc-------------------------ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 042816 7 FRISVIYSYNNSVLAAAKKLAR-------------------------FSSVSAPSQNLLVSMLSDTKFVQKFININRERL 61 (163)
Q Consensus 7 ~RiG~~i~~~~~~~~~~~~~~~-------------------------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 61 (163)
.++||+++ ++++++.+..... ..+++...+.++...+.... +..+++.++.+
T Consensus 216 ~g~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~ 292 (393)
T 3kgw_A 216 PGISLISF-NDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIA--EQGLENCWRRH 292 (393)
T ss_dssp SSCEEEEE-CHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHH--HHCHHHHHHHH
T ss_pred CceeEEEE-CHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHH--HhhHHHHHHHH
Confidence 34899999 9999998875432 12456666666666665321 33478889999
Q ss_pred HHHHHHHHHHhhhcCCccccCC----ceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEE
Q 042816 62 RRLYVKFVAGLRQLGIECAKSN----GGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSF 137 (163)
Q Consensus 62 ~~~~~~l~~~l~~~g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~ 137 (163)
+++++++.+.|+++|+++..+. +++++|+.++... +..++.+.|++++||.+.||..+.. ++++||++
T Consensus 293 ~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~ 364 (393)
T 3kgw_A 293 REATAHLHKHLQEMGLKFFVKDPEIRLPTITTVTVPAGY------NWRDIVSYVLDHFSIEISGGLGPTE--ERVLRIGL 364 (393)
T ss_dssp HHHHHHHHHHHHHTTCCBSSSSGGGBCSSEEEEECCTTB------CHHHHHHHHHHHHCEECBCCCGGGT--TTEEEEEC
T ss_pred HHHHHHHHHHHHHcCCeeccCChhhcCCeEEEEeCCCCC------CHHHHHHHHHHhCCEEEeCCcccCC--CCEEEEEe
Confidence 9999999999999888876443 3677788887543 6789999998855999999985443 68999998
Q ss_pred -ecC-ChhHHHHHHHHHHHHHHHhhhc
Q 042816 138 -TLL-TEKDIHVVMERIRRISQTCKSH 162 (163)
Q Consensus 138 -~~~-~~~~l~~~~~~l~~~~~~~~~~ 162 (163)
+.. +++++++++++|.++++++++.
T Consensus 365 ~~~~~~~~~i~~~~~~l~~~l~~~~~~ 391 (393)
T 3kgw_A 365 LGYNATTENVDRVAEALREALQHCPKN 391 (393)
T ss_dssp CGGGCCHHHHHHHHHHHHHHHHHSCBC
T ss_pred cccCCCHHHHHHHHHHHHHHHHhhhhc
Confidence 542 8899999999999999887654
No 90
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.56 E-value=3.1e-14 Score=109.63 Aligned_cols=153 Identities=11% Similarity=0.038 Sum_probs=98.7
Q ss_pred CCCCc-eeEEEEEecCHHHHHHHHHh----h--cccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 042816 2 LSLPG-FRISVIYSYNNSVLAAAKKL----A--RFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQ 74 (163)
Q Consensus 2 ~~~~G-~RiG~~i~~~~~~~~~~~~~----~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 74 (163)
|+ +| +|+||+++ ++++++.+... . ..++.++++|.++..+|+.... +++.++.++..+..++.+.+.+.+
T Consensus 263 l~-~G~~r~G~~~~-~~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~ 339 (430)
T 3i4j_A 263 LA-AGYAPLAGLLA-APQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVER-EDLTGAAKERGAQLLAGLQALQAR 339 (430)
T ss_dssp GT-TTSSCCEEEEE-CHHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc-CCccccEEEEE-CHHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHHHHHHHHHh
Confidence 45 38 99999999 99999999874 2 2367899999988888874321 344455555555555556565555
Q ss_pred c-CCccccCCceeEEEeecCCcccCCC---hhhHHHHHHHHHHhcCeEEcCCCCC-CCCCCceEEEEEe-cCChhHHHHH
Q 042816 75 L-GIECAKSNGGFYCWADMSGLISSYS---EKGELELWDKLLNVAKVNVTPGSSC-HCIEPGWFSFSFT-LLTEKDIHVV 148 (163)
Q Consensus 75 ~-g~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~gi~v~pg~~f-~~~~~~~iRi~~~-~~~~~~l~~~ 148 (163)
+ ++...++.|. |+|++++....... .....++++.|++ +||.+.|+..+ ...+++++||+++ ..++++++++
T Consensus 340 ~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~ 417 (430)
T 3i4j_A 340 FPQMMQVRGTGL-LLGVVLGDLATGQAFETPGIASRIGAAALK-RGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGL 417 (430)
T ss_dssp CTTEEEEEEETT-EEEEEEC------------CHHHHHHHHHH-TTEECC-----------CEEEECCCTTCCHHHHHHH
T ss_pred CCCeEEEEEEEE-EEEEEeccccccCCCccHHHHHHHHHHHHh-CCCEEEecccccCCCCCCEEEEECCCCCCHHHHHHH
Confidence 5 4556666655 56667653110000 0123678888886 89999998433 2233689999987 3488999999
Q ss_pred HHHHHHHHHHh
Q 042816 149 MERIRRISQTC 159 (163)
Q Consensus 149 ~~~l~~~~~~~ 159 (163)
+++|.++++++
T Consensus 418 l~~l~~~l~~~ 428 (430)
T 3i4j_A 418 LALLAGALEDV 428 (430)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 91
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.55 E-value=7.2e-14 Score=106.47 Aligned_cols=146 Identities=14% Similarity=0.056 Sum_probs=108.0
Q ss_pred CCCCCceeEEEEEecCHHHHHHHHHhhcc----cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 042816 1 DLSLPGFRISVIYSYNNSVLAAAKKLARF----SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLG 76 (163)
Q Consensus 1 ~~~~~G~RiG~~i~~~~~~~~~~~~~~~~----~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 76 (163)
.||++| ||+++ ++++++.+...... .+++++.|.++..+++.-. +..+++.++.++++++++.+.|++.|
T Consensus 249 ~~~~~G---G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g 322 (401)
T 2bwn_A 249 AYGVFG---GYIAA-SARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLK--TAEGQKLRDAQQMHAKVLKMRLKALG 322 (401)
T ss_dssp TTCSCC---EEEEE-CHHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hccCCC---CEEec-CHHHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHH--hcccHHHHHHHHHHHHHHHHHHHHCC
Confidence 367778 99999 89999888765431 2345567766666654321 11246778889999999999998888
Q ss_pred CccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCC-CCceEEEEEec-CChhHHHHHHHHHHH
Q 042816 77 IECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCI-EPGWFSFSFTL-LTEKDIHVVMERIRR 154 (163)
Q Consensus 77 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~-~~~~iRi~~~~-~~~~~l~~~~~~l~~ 154 (163)
+++.++.++ ++|++++... +..++++.|++++||.+.|+..|+.+ +.+++|++++. .++++++.+++.|.+
T Consensus 323 ~~~~~~~~~-~~~~~~~~~~------~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~ 395 (401)
T 2bwn_A 323 MPIIDHGSH-IVPVVIGDPV------HTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDL 395 (401)
T ss_dssp CCBCCCSSS-CEEEECCCHH------HHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHH
T ss_pred CcccCCCCC-eEEEEeCChH------HHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHH
Confidence 888888877 6888887532 67889998875589999999877643 34699999983 388999999999998
Q ss_pred HHHHh
Q 042816 155 ISQTC 159 (163)
Q Consensus 155 ~~~~~ 159 (163)
+++++
T Consensus 396 ~~~~~ 400 (401)
T 2bwn_A 396 LWARC 400 (401)
T ss_dssp HC---
T ss_pred HHHhc
Confidence 87654
No 92
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.54 E-value=3e-13 Score=102.57 Aligned_cols=147 Identities=12% Similarity=0.078 Sum_probs=110.1
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhh----cc---------------------cCCChHHHHHHHHhcCChHHHHHHHHH
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLA----RF---------------------SSVSAPSQNLLVSMLSDTKFVQKFINI 56 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~----~~---------------------~~~s~~~q~~~~~~l~~~~~~~~~~~~ 56 (163)
+|.+|+ ||+++ ++++++.+.... .+ .+++...+.++..+++... +..+++
T Consensus 209 ~g~~G~--G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~ 283 (393)
T 2huf_A 209 GAPPGI--TPVSF-SHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMAC--EEGLPA 283 (393)
T ss_dssp CCCSSC--EEEEE-CHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHH--HHCHHH
T ss_pred ccCCCe--EEEEE-CHHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHH--HhCHHH
Confidence 356787 99999 899999887651 10 1345556666666665421 123678
Q ss_pred HHHHHHHHHHHHHHHhhhcCCccccCC---ceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceE
Q 042816 57 NRERLRRLYVKFVAGLRQLGIECAKSN---GGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWF 133 (163)
Q Consensus 57 ~~~~~~~~~~~l~~~l~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~i 133 (163)
.++.++++++++.+.|+++|+++..|. +++++|++++... +..++.+.|++++||.+.||..|.. ++++
T Consensus 284 ~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~L~~~~gi~v~~g~~~~~--~~~~ 355 (393)
T 2huf_A 284 LIARHEDCAKRLYRGLQDAGFELYADPKDRLSTVTTIKVPQGV------DWLKAAQYAMKTYLVEISGGLGPTA--GQVF 355 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCTTEEEEECCTTC------CHHHHHHHHHHHHCEECBCCCGGGT--TTEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCeeccCccccCCcEEEEEcCCCC------CHHHHHHHHHHhCCEEEecCccccc--CCEE
Confidence 888999999999999998888877663 4568888887432 6788999888756999999987643 6899
Q ss_pred EEEE-ec-CChhHHHHHHHHHHHHHHHhhh
Q 042816 134 SFSF-TL-LTEKDIHVVMERIRRISQTCKS 161 (163)
Q Consensus 134 Ri~~-~~-~~~~~l~~~~~~l~~~~~~~~~ 161 (163)
||++ +. .+++++++++++|.+++++++.
T Consensus 356 Ri~~~~~~~~~e~i~~~~~~l~~~~~~~~~ 385 (393)
T 2huf_A 356 RIGLMGQNATTERVDRVLQVFQEAVAAVKP 385 (393)
T ss_dssp EEECCGGGCSHHHHHHHHHHHHHHHHHHCC
T ss_pred EEEcccCcCCHHHHHHHHHHHHHHHHHcCC
Confidence 9999 52 2678899999999999987754
No 93
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.54 E-value=8.5e-14 Score=103.83 Aligned_cols=140 Identities=12% Similarity=0.057 Sum_probs=105.0
Q ss_pred CCCceeEEEEEecCHHHHHHHHH-------------h--hc--ccCCChHHHHHHHHhcCChHHHHHH-HHHHHHHHHHH
Q 042816 3 SLPGFRISVIYSYNNSVLAAAKK-------------L--AR--FSSVSAPSQNLLVSMLSDTKFVQKF-ININRERLRRL 64 (163)
Q Consensus 3 ~~~G~RiG~~i~~~~~~~~~~~~-------------~--~~--~~~~s~~~q~~~~~~l~~~~~~~~~-~~~~~~~~~~~ 64 (163)
|.+| +||+++ ++++++.+.. . .. ..+++.+.+.++..+++.- .+. +++.++.++++
T Consensus 190 ~~~g--~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~~~~~~~~~~~~~ 263 (353)
T 2yrr_A 190 APPG--LAPIAA-SLEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLV---LEEGVAARERRAREV 263 (353)
T ss_dssp CCSS--CEEEEE-CHHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHH---HHHCHHHHHHHHHHH
T ss_pred CCCc--eEEEEE-CHHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHH---HHhhHHHHHHHHHHH
Confidence 4466 699999 8888876641 0 11 2456777777666666542 233 67889999999
Q ss_pred HHHHHHHhhhcCCccccCC--ceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEE-ecCC
Q 042816 65 YVKFVAGLRQLGIECAKSN--GGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSF-TLLT 141 (163)
Q Consensus 65 ~~~l~~~l~~~g~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~-~~~~ 141 (163)
++++.+.|++.|+++..+. +++++|++++... +..++.+.|.+ +||.+.||..|.. ++++|+++ ...+
T Consensus 264 ~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~-~gi~v~~g~~~~~--~~~iRi~~~~~~~ 334 (353)
T 2yrr_A 264 YAWVLEELKARGFRPYPKASPLPTVLVVRPPEGV------DADRLVRALYA-EGVAVAGGIGPTR--GQVLRLGLMGEGA 334 (353)
T ss_dssp HHHHHHHHHHTTCEESCSSSBCTTEEEEECCTTC------CHHHHHHHHHH-TTEECEECCGGGT--TTCEEEECSGGGS
T ss_pred HHHHHHHHHHCCCccccCccCCCeEEEEECCCCC------CHHHHHHHHHH-CCEEEeCCccccC--CCeEEEecCccCC
Confidence 9999999988888777654 6778888887433 67889998887 7999999987653 67999999 3347
Q ss_pred hhHHH-HHHHHHHHHHH
Q 042816 142 EKDIH-VVMERIRRISQ 157 (163)
Q Consensus 142 ~~~l~-~~~~~l~~~~~ 157 (163)
.++++ +++++|.++++
T Consensus 335 ~~~~~~~~~~~l~~~l~ 351 (353)
T 2yrr_A 335 RREAYQAFLKALDRALA 351 (353)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 78888 99999998765
No 94
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.54 E-value=1.4e-14 Score=111.13 Aligned_cols=146 Identities=12% Similarity=0.036 Sum_probs=97.2
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc--ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc----
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR--FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL---- 75 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---- 75 (163)
||. |+|+||+++ ++++++.+..... .++++++.|.++..+|+.-. + +...+.++++++.+.+.|++.
T Consensus 270 ~~~-GlriG~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~---~--~~~~~~~~~~~~~l~~~l~~~~~~~ 342 (426)
T 1sff_A 270 IAG-GFPLAGVTG-RAEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFE---Q--ENLLQKANDLGQKLKDGLLAIAEKH 342 (426)
T ss_dssp GGT-SSCCEEEEE-EHHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHH---H--TTHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccC-CCceEEEEE-cHHHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHH---h--cCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 565 999999999 8888887764322 35678899988886664321 1 122333344444444444432
Q ss_pred -CCccccCCceeEEEeecCCccc--CCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEe-cCChhHHHHHHHH
Q 042816 76 -GIECAKSNGGFYCWADMSGLIS--SYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFT-LLTEKDIHVVMER 151 (163)
Q Consensus 76 -g~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~-~~~~~~l~~~~~~ 151 (163)
.+...++. |+++|++++.... .+...++.++++.|++ +||.+.||..| ++++||+++ ..+++++++++++
T Consensus 343 ~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~gi~v~~~~~~----~~~iRi~~~~~~~~~~i~~~~~~ 416 (426)
T 1sff_A 343 PEIGDVRGL-GAMIAIELFEDGDHNKPDAKLTAEIVARARD-KGLILLSCGPY----YNVLRILVPLTIEDAQIRQGLEI 416 (426)
T ss_dssp TTEEEEEEE-TTEEEEEEBGGGCTTSBCHHHHHHHHHHHHH-TTEECEEESTT----SCEEEECCCTTCCHHHHHHHHHH
T ss_pred CCeEEEEEE-EEEEEEEEecCccccCCChHHHHHHHHHHHH-CCcEEecCCCC----CCEEEEECCccCCHHHHHHHHHH
Confidence 12334455 6789999853110 0111256789998886 89999998764 579999986 4589999999999
Q ss_pred HHHHHHHhh
Q 042816 152 IRRISQTCK 160 (163)
Q Consensus 152 l~~~~~~~~ 160 (163)
|.+++++++
T Consensus 417 l~~~l~~~~ 425 (426)
T 1sff_A 417 ISQCFDEAK 425 (426)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 999988764
No 95
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.52 E-value=7.5e-14 Score=105.73 Aligned_cols=139 Identities=19% Similarity=0.188 Sum_probs=108.2
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc-c---cCCChHHHHHHHHhcCChHHHHH-HHHHHHHHHHHHHHHHHHHhhhcC
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR-F---SSVSAPSQNLLVSMLSDTKFVQK-FININRERLRRLYVKFVAGLRQLG 76 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~-~---~~~s~~~q~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~g 76 (163)
||.+| ||+++ ++++++.+..... + .+++.+.|.++...++.. .+ +.++.++.++++++++.+.|+++|
T Consensus 238 ~~~~G---G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~---~~~~~~~~~~~~~~~~~~l~~~L~~~g 310 (384)
T 1bs0_A 238 FGVSG---AAVLC-SSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVI---RSDEGDARREKLAALITRFRAGVQDLP 310 (384)
T ss_dssp TSSCC---EEEEE-CHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHH---HSHHHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred hhccC---cEEEe-CHHHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHH---hccccHHHHHHHHHHHHHHHHHHHhcC
Confidence 56667 99999 8999998877543 2 257888888777777543 22 567888999999999999999988
Q ss_pred CccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCC-CCceEEEEEec-CChhHHHHHHHHHHH
Q 042816 77 IECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCI-EPGWFSFSFTL-LTEKDIHVVMERIRR 154 (163)
Q Consensus 77 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~-~~~~iRi~~~~-~~~~~l~~~~~~l~~ 154 (163)
+++.+ .+|.++|++++... +..++.+.|.+ +||.+.||..|+.+ +++++||+++. ++++++++++++|.+
T Consensus 311 ~~~~~-~~~~~~~~~~~~~~------~~~~l~~~l~~-~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~ 382 (384)
T 1bs0_A 311 FTLAD-SCSAIQPLIVGDNS------RALQLAEKLRQ-QGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHG 382 (384)
T ss_dssp CEECS-CCSSBCCEEEESHH------HHHHHHHHHHH-TTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHH
T ss_pred CcccC-CCCCEEEEEeCCHH------HHHHHHHHHHH-CCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHh
Confidence 88764 45667788887432 67889998887 79999999887632 35899999985 378899999999876
Q ss_pred H
Q 042816 155 I 155 (163)
Q Consensus 155 ~ 155 (163)
+
T Consensus 383 ~ 383 (384)
T 1bs0_A 383 N 383 (384)
T ss_dssp H
T ss_pred h
Confidence 4
No 96
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.52 E-value=6.6e-13 Score=100.62 Aligned_cols=144 Identities=11% Similarity=-0.019 Sum_probs=107.3
Q ss_pred CCCceeEEEEEecCHHHHHHHHHhh--------------------c--ccCCChHHHHHHHHhcCChHHHHHH-HHHHHH
Q 042816 3 SLPGFRISVIYSYNNSVLAAAKKLA--------------------R--FSSVSAPSQNLLVSMLSDTKFVQKF-ININRE 59 (163)
Q Consensus 3 ~~~G~RiG~~i~~~~~~~~~~~~~~--------------------~--~~~~s~~~q~~~~~~l~~~~~~~~~-~~~~~~ 59 (163)
|.+|+ ||+++ ++++++.+.... . ..+++...+.++..+++.- .++ +++.++
T Consensus 200 ~~~g~--G~l~~-~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~g~~~~~~ 273 (392)
T 2z9v_A 200 APPGL--TMMGV-SERAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLY---LNEGPEAVWA 273 (392)
T ss_dssp CCSCC--EEEEE-CHHHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHH---HHHCHHHHHH
T ss_pred CCCce--eEEEE-CHHHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHH---HhccHHHHHH
Confidence 44555 99999 899988886421 1 1245555566665666432 344 678899
Q ss_pred HHHHHHHHHHHHhhhcCCccccCC----ceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEE
Q 042816 60 RLRRLYVKFVAGLRQLGIECAKSN----GGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSF 135 (163)
Q Consensus 60 ~~~~~~~~l~~~l~~~g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi 135 (163)
.++++++++.+.|+++|+++..|. .+.++|+.++... +..++.+.|.+++||.+.||..+.. ++++||
T Consensus 274 ~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~L~~~~gi~v~~g~~~~~--~~~lRi 345 (392)
T 2z9v_A 274 RHALTAKAMRAGVTAMGLSVWAASDSIASPTTTAVRTPDGV------DEKALRQAARARYGVVFSSGRGETL--GKLTRI 345 (392)
T ss_dssp HHHHHHHHHHHHHHHTTCCBSSSSGGGBCTTEEEEECCTTC------CHHHHHHHHHHHHCEECEECCGGGT--TTEEEE
T ss_pred HHHHHHHHHHHHHHHcCCeeccCCccccCCceEEEECCCCC------CHHHHHHHHHhcCCEEEecCCCCCC--CCeEEE
Confidence 999999999999988888777633 4677888887432 6788999888745999999986543 689999
Q ss_pred EE-e-cCChhHHHHHHHHHHHHHHHhh
Q 042816 136 SF-T-LLTEKDIHVVMERIRRISQTCK 160 (163)
Q Consensus 136 ~~-~-~~~~~~l~~~~~~l~~~~~~~~ 160 (163)
++ + ..+++++++++++|.+++++++
T Consensus 346 ~~~~~~~~~~~i~~~~~~l~~~~~~~~ 372 (392)
T 2z9v_A 346 GHMGPTAQPIYAIAALTALGGAMNAAG 372 (392)
T ss_dssp ECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred eCcccccCHHHHHHHHHHHHHHHHHcC
Confidence 95 5 4589999999999999998765
No 97
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.51 E-value=9.4e-13 Score=100.29 Aligned_cols=143 Identities=8% Similarity=-0.031 Sum_probs=109.9
Q ss_pred ceeEEEEEecCHHHHHHHHHhh--------------------------------------cccCCChHHHHHHHHhcCCh
Q 042816 6 GFRISVIYSYNNSVLAAAKKLA--------------------------------------RFSSVSAPSQNLLVSMLSDT 47 (163)
Q Consensus 6 G~RiG~~i~~~~~~~~~~~~~~--------------------------------------~~~~~s~~~q~~~~~~l~~~ 47 (163)
+.++||+++ ++++++.+.... ...+++...+.++..+++..
T Consensus 205 ~~g~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~ 283 (411)
T 3nnk_A 205 PSGTSPITL-SARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLI 283 (411)
T ss_dssp CSSEEEEEE-CHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHH
T ss_pred CCceEEEEE-CHHHHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHH
Confidence 346899999 999999887654 01345666666666666543
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHhhhcCCccccCCc---eeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCC
Q 042816 48 KFVQKF-ININRERLRRLYVKFVAGLRQLGIECAKSNG---GFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGS 123 (163)
Q Consensus 48 ~~~~~~-~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~ 123 (163)
.++ +++.++.++++++++.+.|++.|+++..+.+ +.++|+.+|... +..++.+.|++++||.+.||.
T Consensus 284 ---~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~l~~~~gi~v~~g~ 354 (411)
T 3nnk_A 284 ---LQEGLDYGIARHKLHGDALVKGIQAMGLETFGDLKHKMNNVLGVVIPQGI------NGDQARKLMLEDFGIEIGTSF 354 (411)
T ss_dssp ---HHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCSSEEEEECCTTC------CHHHHHHHHHHHHSEEEEECC
T ss_pred ---HHhhHHHHHHHHHHHHHHHHHHHHHcCCEeCCCcccccccEEEEECCCCC------CHHHHHHHHHHhcCeEEeCcc
Confidence 344 7889999999999999999998888876654 678888887543 678999988885699999984
Q ss_pred CCCCCCCceEEEEE-ecC-ChhHHHHHHHHHHHHHHHhh
Q 042816 124 SCHCIEPGWFSFSF-TLL-TEKDIHVVMERIRRISQTCK 160 (163)
Q Consensus 124 ~f~~~~~~~iRi~~-~~~-~~~~l~~~~~~l~~~~~~~~ 160 (163)
.. ..++++||++ +.. +++++++++++|.++++++.
T Consensus 355 ~~--~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~ 391 (411)
T 3nnk_A 355 GP--LHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLK 391 (411)
T ss_dssp GG--GTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred CC--CCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHcC
Confidence 32 2367999998 532 68999999999999998764
No 98
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.50 E-value=2.7e-13 Score=101.19 Aligned_cols=140 Identities=6% Similarity=-0.059 Sum_probs=106.0
Q ss_pred eEEEEEecCHHHHHH---------HH----Hh--hc-ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 042816 8 RISVIYSYNNSVLAA---------AK----KL--AR-FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAG 71 (163)
Q Consensus 8 RiG~~i~~~~~~~~~---------~~----~~--~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 71 (163)
++||+++ ++++++. +. .. .. ..+++.+.+.++..+++.- .+++++.++.++++++++.+.
T Consensus 192 g~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~~~~~~~~~~~~~~~l~~~ 267 (352)
T 1iug_A 192 GLGFVAL-SPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEV---LPRLEEHLALKAWQNALLYGV 267 (352)
T ss_dssp CEEEEEE-CHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHH---GGGHHHHHHHHHHHHHHHHHH
T ss_pred ceeEEEE-CHHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
Confidence 4799999 8887654 22 11 11 2456777777777676542 233678899999999999999
Q ss_pred hhhcCCccccCC-ceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecC-ChhHHHHHH
Q 042816 72 LRQLGIECAKSN-GGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLL-TEKDIHVVM 149 (163)
Q Consensus 72 l~~~g~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~-~~~~l~~~~ 149 (163)
|++.|+++..|. .+.++|++++... +..++.+.|.+ +||.+.||... ..++++||+++.. +++++++++
T Consensus 268 L~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~-~gi~v~~~~~~--~~~~~iRi~~~~~~~~~~i~~~~ 338 (352)
T 1iug_A 268 GEEGGLRPVPKRFSPAVAAFYLPEGV------PYARVKEAFAQ-RGAVIAGGQGP--LKGKVFRLSLMGAYDRYEALGVA 338 (352)
T ss_dssp HHHTTCEESCSSBCTTCEEEECCTTC------CHHHHHHHHHT-TTEECEECCGG--GTTTEEEECCCSSCCHHHHHHHH
T ss_pred HHHCCCcccccccCCeEEEEEcCCCC------CHHHHHHHHHH-CCEEEEeCCCc--cCCCEEEEEccccCCHHHHHHHH
Confidence 998888887775 6778999987432 67889998876 79999998843 2368999999853 689999999
Q ss_pred HHHHHHHHHhh
Q 042816 150 ERIRRISQTCK 160 (163)
Q Consensus 150 ~~l~~~~~~~~ 160 (163)
++|.++++++.
T Consensus 339 ~~l~~~~~~~~ 349 (352)
T 1iug_A 339 GMFREVLEEIL 349 (352)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhc
Confidence 99999988763
No 99
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.48 E-value=1.2e-12 Score=99.27 Aligned_cols=143 Identities=10% Similarity=0.027 Sum_probs=110.0
Q ss_pred eeEEEEEecCHHHHHHHHHhh-----------------------c--ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 042816 7 FRISVIYSYNNSVLAAAKKLA-----------------------R--FSSVSAPSQNLLVSMLSDTKFVQKFININRERL 61 (163)
Q Consensus 7 ~RiG~~i~~~~~~~~~~~~~~-----------------------~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 61 (163)
.++||+++ ++++++.+...+ . ..+++.+.|.++..+++.-. ++++++.++.+
T Consensus 211 ~g~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~ 287 (396)
T 2ch1_A 211 PGITPISI-SPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIA--EEGLENQIKRR 287 (396)
T ss_dssp SSCEEEEE-CHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHH--HHCHHHHHHHH
T ss_pred CCeEEEEE-CHHHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHH--HhhHHHHHHHH
Confidence 35599999 888888775421 1 13467778888777776521 35578889999
Q ss_pred HHHHHHHHHHhhhcCCccccCCce----eEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEE
Q 042816 62 RRLYVKFVAGLRQLGIECAKSNGG----FYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSF 137 (163)
Q Consensus 62 ~~~~~~l~~~l~~~g~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~ 137 (163)
+++++++.+.|+++|+++..+.++ .++|+.++... +..++.+.|++++||.+.||..+. .++++||++
T Consensus 288 ~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~L~~~~gi~v~~g~~~~--~~~~iRi~~ 359 (396)
T 2ch1_A 288 IECAQILYEGLGKMGLDIFVKDPRHRLPTVTGIMIPKGV------DWWKVSQYAMNNFSLEVQGGLGPT--FGKAWRVGI 359 (396)
T ss_dssp HHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEECCTTC------CHHHHHHHHHHHHCBCCBCCCGGG--TTTEEEEEC
T ss_pred HHHHHHHHHHHHHCCCeeccCCccccCCceEEEEcCCCC------CHHHHHHHHHHhCCEEEecCcccc--CCCEEEEEC
Confidence 999999999999889888877764 37888887433 678899999875699999987543 368999999
Q ss_pred -e-cCChhHHHHHHHHHHHHHHHhh
Q 042816 138 -T-LLTEKDIHVVMERIRRISQTCK 160 (163)
Q Consensus 138 -~-~~~~~~l~~~~~~l~~~~~~~~ 160 (163)
+ ..+++++++++++|.+++++++
T Consensus 360 ~~~~~~~e~i~~~~~~l~~~l~~~~ 384 (396)
T 2ch1_A 360 MGECSTVQKIQFYLYGFKESLKATH 384 (396)
T ss_dssp CGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHhC
Confidence 4 2378899999999999998765
No 100
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.48 E-value=5e-13 Score=100.07 Aligned_cols=139 Identities=16% Similarity=0.141 Sum_probs=106.1
Q ss_pred eeEEEEEecCHHHHHHHHHhh------------------c--ccCCChHHHHHHHHhcCChHHHHHH--HHHHHHHHHHH
Q 042816 7 FRISVIYSYNNSVLAAAKKLA------------------R--FSSVSAPSQNLLVSMLSDTKFVQKF--ININRERLRRL 64 (163)
Q Consensus 7 ~RiG~~i~~~~~~~~~~~~~~------------------~--~~~~s~~~q~~~~~~l~~~~~~~~~--~~~~~~~~~~~ 64 (163)
.++||+++ ++++++.+.... . .++++.+.+.++..+++.- .++ +++.++.++++
T Consensus 199 ~g~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~g~~~~~~~~~~~~ 274 (366)
T 1m32_A 199 PGFAFVIA-REQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKEL---AKEGGVAARHQRYQQN 274 (366)
T ss_dssp SSEEEEEE-EHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHH---HHHTHHHHHHHHHHHH
T ss_pred CceEEEEE-CHHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHH---HHccCHhHHHHHHHHH
Confidence 35699999 888876654321 0 1356777777777776543 344 67889999999
Q ss_pred HHHHHHHhhhcCCccccC---CceeEEEeecCC--cccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec
Q 042816 65 YVKFVAGLRQLGIECAKS---NGGFYCWADMSG--LISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL 139 (163)
Q Consensus 65 ~~~l~~~l~~~g~~~~~~---~~g~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~ 139 (163)
++++.+.|+++|+++..+ .+++++|++++. .. +..++.+.|.+ +||.+.||..|. ++++|++++.
T Consensus 275 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~-~gi~v~~~~~~~---~~~iRi~~~~ 344 (366)
T 1m32_A 275 QRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDPQY------RFSEFYRRLKE-QGFVIYPGKVSQ---SDCFRIGNIG 344 (366)
T ss_dssp HHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCCCTTC------CHHHHHHHHHH-TTEECEECCCSS---SCEEEEECCS
T ss_pred HHHHHHHHHHCCCeeccCchhcCceEEEEEcCccCCC------CHHHHHHHHHH-CCEEEECCcCCC---CCEEEEecCC
Confidence 999999999888777654 478899999874 22 67889998887 799999998874 6899999985
Q ss_pred C-ChhHHHHHHHHHHHHHHHh
Q 042816 140 L-TEKDIHVVMERIRRISQTC 159 (163)
Q Consensus 140 ~-~~~~l~~~~~~l~~~~~~~ 159 (163)
. ++++++++++.|.++++++
T Consensus 345 ~~~~~~i~~~~~~l~~~~~~~ 365 (366)
T 1m32_A 345 EVYAADITALLTAIRTAMYWT 365 (366)
T ss_dssp SCCHHHHHHHHHHHHHHCTTC
T ss_pred CCCHHHHHHHHHHHHHHHHhc
Confidence 3 6899999999999887654
No 101
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.48 E-value=1.4e-13 Score=106.07 Aligned_cols=146 Identities=14% Similarity=0.173 Sum_probs=109.6
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc-c---cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR-F---SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGI 77 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~-~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 77 (163)
||++| ||+++ ++++++.+..... + .+.+++.+.++...++.- ++++..++.++++++++.+.|++.|+
T Consensus 266 ~g~~g---G~v~~-~~~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~----~~~~~~~~~~~~~~~~l~~~L~~~g~ 337 (427)
T 2w8t_A 266 VGTVG---GFVVS-NHPKFEAVRLACRPYIFTASLPPSVVATATTSIRKL----MTAHEKRERLWSNARALHGGLKAMGF 337 (427)
T ss_dssp TCSCC---EEEEE-CCTTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHH----TSCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hccCC---CEEEe-CHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 56666 99999 8888888776532 2 245665555555666542 22467888899999999999998888
Q ss_pred ccc-cCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCC-CCceEEEEEec-CChhHHHHHHHHHHH
Q 042816 78 ECA-KSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCI-EPGWFSFSFTL-LTEKDIHVVMERIRR 154 (163)
Q Consensus 78 ~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~-~~~~iRi~~~~-~~~~~l~~~~~~l~~ 154 (163)
.+. ++..|.++|+.++.. .+..++++.|++ +||.+.||..|..+ +.+++||+++. +++++++.++++|.+
T Consensus 338 ~~~~~~~~~~~~~~~~~~~------~~~~~l~~~L~~-~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~ 410 (427)
T 2w8t_A 338 RLGTETCDSAIVAVMLEDQ------EQAAMMWQALLD-GGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQA 410 (427)
T ss_dssp EESCSSCCSSEEEEEESSH------HHHHHHHHHHHH-TTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred cccCCCCCCCEEEEEECCH------HHHHHHHHHHHH-CCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 877 442456788888753 267889998887 69999999877643 35799999985 488999999999999
Q ss_pred HHHHhhhc
Q 042816 155 ISQTCKSH 162 (163)
Q Consensus 155 ~~~~~~~~ 162 (163)
+++++.+.
T Consensus 411 ~l~~~~~~ 418 (427)
T 2w8t_A 411 AGRAVGVI 418 (427)
T ss_dssp HHHHHTCC
T ss_pred HHHHhCcc
Confidence 99876543
No 102
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.47 E-value=1.2e-12 Score=99.57 Aligned_cols=145 Identities=8% Similarity=-0.006 Sum_probs=106.3
Q ss_pred CCceeEEEEEecCHHHHHHHHHhhcc--cCCChHHH-HHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc
Q 042816 4 LPGFRISVIYSYNNSVLAAAKKLARF--SSVSAPSQ-NLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIECA 80 (163)
Q Consensus 4 ~~G~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 80 (163)
.+| ||+++ ++++++.+...... .+.+.+.| .++..+++... +.++++.++.++++++++.+.|+++|+++.
T Consensus 231 ~~g---G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 304 (405)
T 2vi8_A 231 PRG---GMILC-QEQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEAL--QDDFKAYAKRVVDNAKRLASALQNEGFTLV 304 (405)
T ss_dssp CSC---EEEEE-CHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHH--SHHHHHHHHHHHHHHHHHHHHHHHTTCEEG
T ss_pred CCC---eEEEE-cHHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHHHHHHhCCCeEe
Confidence 556 99999 89999988776543 23333444 44445554321 246788899999999999999998888887
Q ss_pred cC-CceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCC----CCCCCCceEEEEEec-----CChhHHHHHHH
Q 042816 81 KS-NGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSS----CHCIEPGWFSFSFTL-----LTEKDIHVVME 150 (163)
Q Consensus 81 ~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~----f~~~~~~~iRi~~~~-----~~~~~l~~~~~ 150 (163)
.| .+++++|++++... .+..++.+.|.+ +||.+.||.. ++...++++||+++. +++++++.+++
T Consensus 305 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~-~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~ 378 (405)
T 2vi8_A 305 SGGTDNHLLLVDLRPQQ-----LTGKTAEKVLDE-VGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAA 378 (405)
T ss_dssp GGSCSSSEEEEECGGGT-----CCHHHHHHHHHH-HTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHH
T ss_pred cCCCCceEEEEEccCCC-----CCHHHHHHHHHH-cCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHH
Confidence 65 46889999987410 156778887755 8999999863 332235789999984 57899999999
Q ss_pred HHHHHHHHhh
Q 042816 151 RIRRISQTCK 160 (163)
Q Consensus 151 ~l~~~~~~~~ 160 (163)
+|.+++++.+
T Consensus 379 ~l~~~~~~~~ 388 (405)
T 2vi8_A 379 IIGLVLKNVG 388 (405)
T ss_dssp HHHHHHTCTT
T ss_pred HHHHHHhccc
Confidence 9999887653
No 103
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.47 E-value=1.2e-13 Score=104.23 Aligned_cols=147 Identities=16% Similarity=0.159 Sum_probs=103.4
Q ss_pred CCCCceeEEEEEecCHHH--HHHHHHh-----hcccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 042816 2 LSLPGFRISVIYSYNNSV--LAAAKKL-----ARFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQ 74 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~--~~~~~~~-----~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 74 (163)
||++| +||+++ ++++ ...+... ...++++.+.|.++..+|+.. .+++++.++.++++++++.+.|++
T Consensus 205 ~g~~G--~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~~~~~~~~~~~~~~~l~~~L~~ 278 (384)
T 1eg5_A 205 HGPKG--VGITYI-RKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIA---VEELSEAAKHMEKLRSKLVSGLMN 278 (384)
T ss_dssp TSCTT--CEEEEE-CTTSCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHH---HHTHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCc--eEEEEE-cCCCccccccccCcccccccCCCCChHHHHHHHHHHHHH---HHhHHHHHHHHHHHHHHHHHHhCC
Confidence 67888 799999 6664 2222111 112467888998888888763 456788999999999999999988
Q ss_pred cCCccccCC-c--eeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCC-----------------CCceEE
Q 042816 75 LGIECAKSN-G--GFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCI-----------------EPGWFS 134 (163)
Q Consensus 75 ~g~~~~~~~-~--g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~-----------------~~~~iR 134 (163)
.|+++..+. + +.++++.++.. +..++.+.|.+ +||.+.||..|... .++++|
T Consensus 279 ~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iR 350 (384)
T 1eg5_A 279 LGAHIITPLEISLPNTLSVSFPNI-------RGSTLQNLLSG-YGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIR 350 (384)
T ss_dssp TTCEECSCTTSBCTTEEEEECTTC-------CHHHHHHHHHH-TTEECBC------------CHHHHTTCCHHHHHHEEE
T ss_pred CCeEEeCCcccCCCCEEEEEeCCC-------CHHHHHHHHhh-CCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEE
Confidence 787776553 2 33566666631 56788888865 89999999877532 147999
Q ss_pred EEEec-CChhHHHHHHHHHHHHHHHhhhc
Q 042816 135 FSFTL-LTEKDIHVVMERIRRISQTCKSH 162 (163)
Q Consensus 135 i~~~~-~~~~~l~~~~~~l~~~~~~~~~~ 162 (163)
|+++. .+++++++++++|.+++++++.+
T Consensus 351 i~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 379 (384)
T 1eg5_A 351 ISLCKYNTEEEVDYFLKKIEEILSFLDLT 379 (384)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHHHHC---
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 99983 48899999999999999887653
No 104
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.46 E-value=3.7e-12 Score=97.12 Aligned_cols=143 Identities=12% Similarity=0.100 Sum_probs=108.3
Q ss_pred ceeEEEEEecCHHHHHHHHHhh------------------------------------c----ccCCChHHHHHHHHhcC
Q 042816 6 GFRISVIYSYNNSVLAAAKKLA------------------------------------R----FSSVSAPSQNLLVSMLS 45 (163)
Q Consensus 6 G~RiG~~i~~~~~~~~~~~~~~------------------------------------~----~~~~s~~~q~~~~~~l~ 45 (163)
+.++||+++ ++++++.+...+ . ..+++...+.++...++
T Consensus 203 ~~g~g~~~~-~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~ 281 (416)
T 3isl_A 203 PSGMAPITY-NERVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVR 281 (416)
T ss_dssp CSSEEEEEE-CHHHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHH
T ss_pred CCCeEEEEE-CHHHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHH
Confidence 346899999 899988887432 1 12456677777666665
Q ss_pred ChHHHHHH-HHHHHHHHHHHHHHHHHHhhhcCCccccCCc---eeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcC
Q 042816 46 DTKFVQKF-ININRERLRRLYVKFVAGLRQLGIECAKSNG---GFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTP 121 (163)
Q Consensus 46 ~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~p 121 (163)
.. .++ +++.++.+.++++++.+.|++.|+++..+.+ +.++++.++... +..++.+.|++++||.+.|
T Consensus 282 ~~---~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~L~~~~gi~v~~ 352 (416)
T 3isl_A 282 LV---LEEGLETRFERHRHHEAALAAGIKAMGLRLFGDDSCKMPVVTCVEIPGGI------DGESVRDMLLAQFGIEIAS 352 (416)
T ss_dssp HH---HHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCTTEEEEECCTTC------CHHHHHHHHHHHHCEECBC
T ss_pred HH---HHhhHHHHHHHHHHHHHHHHHHHHHcCCEeccCccccCCcEEEEeCCCCC------CHHHHHHHHHHhCCEEEec
Confidence 43 444 7899999999999999999998888887764 567888887543 6789999998756999999
Q ss_pred CCCCCCCCCceEEEEEe-cCChhH-HHHHHHHHHHHHHHhh
Q 042816 122 GSSCHCIEPGWFSFSFT-LLTEKD-IHVVMERIRRISQTCK 160 (163)
Q Consensus 122 g~~f~~~~~~~iRi~~~-~~~~~~-l~~~~~~l~~~~~~~~ 160 (163)
|.... .++++||++. ..+.++ +++++++|.++++++.
T Consensus 353 g~~~~--~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~~ 391 (416)
T 3isl_A 353 SFGPL--AGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRHN 391 (416)
T ss_dssp CCSTT--TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCC--CCCEEEEecccCCCcHHHHHHHHHHHHHHHHHcC
Confidence 87432 3689999993 224455 9999999999988764
No 105
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.46 E-value=5e-13 Score=102.89 Aligned_cols=147 Identities=12% Similarity=0.115 Sum_probs=97.6
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhh----cccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc--
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLA----RFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL-- 75 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~----~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-- 75 (163)
||. |+|+||+++ ++++++.+.... ..++.++++|.++..+++.-. + +...+.++++++++.+.|++.
T Consensus 274 ~~~-G~~ig~~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~---~--~~~~~~~~~~~~~l~~~l~~l~~ 346 (433)
T 1zod_A 274 LGA-GLPLAAIVT-SAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQ---R--DGLVARANVMGDRLRRGLLDLME 346 (433)
T ss_dssp HHT-TSSCEEEEE-CHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHH---H--TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccC-CCCeeEEEE-hHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHH---h--CCHHHHHHHHHHHHHHHHHHHHH
Confidence 454 899999999 899999887732 235678899988777775321 1 122334444455555555442
Q ss_pred --C-CccccCCceeEEEeecCCcc--cCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEe-cCChhHHHHHH
Q 042816 76 --G-IECAKSNGGFYCWADMSGLI--SSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFT-LLTEKDIHVVM 149 (163)
Q Consensus 76 --g-~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~-~~~~~~l~~~~ 149 (163)
. +...++. |.|+|++++... +.....+..++++.|++ +||.+.||..|+ .++++||+++ ..+++++++++
T Consensus 347 ~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~--~~~~lRi~~~~~~t~~~i~~~l 422 (433)
T 1zod_A 347 RFDCIGDVRGR-GLLLGVEIVKDRRTKEPADGLGAKITRECMN-LGLSMNIVQLPG--MGGVFRIAPPLTVSEDEIDLGL 422 (433)
T ss_dssp HCTTEEEEEEE-TTEEEEEEEEETTTTEECTTHHHHHHHHHHH-TTEECCEECCTT--SCCEEEECCCTTCCHHHHHHHH
T ss_pred hCCCeEEEEEE-EEEEEEEEecCccccCCChHHHHHHHHHHHH-CCCeEeccCCCC--CCCEEEEECCcCCCHHHHHHHH
Confidence 2 2334444 556788886421 00001246789988886 899999998775 2589999865 34899999999
Q ss_pred HHHHHHHHHh
Q 042816 150 ERIRRISQTC 159 (163)
Q Consensus 150 ~~l~~~~~~~ 159 (163)
++|.++++++
T Consensus 423 ~~l~~~l~~~ 432 (433)
T 1zod_A 423 SLLGQAIERA 432 (433)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999988754
No 106
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.46 E-value=9.4e-13 Score=99.93 Aligned_cols=153 Identities=11% Similarity=0.019 Sum_probs=95.5
Q ss_pred CCceeEEEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCChH--HHHHHHHHHHHHHHHHHHHHHHHhhhc----
Q 042816 4 LPGFRISVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSDTK--FVQKFININRERLRRLYVKFVAGLRQL---- 75 (163)
Q Consensus 4 ~~G~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~l~~~l~~~---- 75 (163)
++|+|+||+++ ++++++.+...... .+++++.|.++...++... .++++.+..+..++++++.+.+.|...
T Consensus 210 l~g~~~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 288 (374)
T 2aeu_A 210 MEGPRGGLLAG-KKELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNI 288 (374)
T ss_dssp SSSCSCEEEEE-EHHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTE
T ss_pred ccCcceEEEEE-CHHHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Confidence 67899999999 89999998877653 3578888888777776421 111222222221122245556655552
Q ss_pred CCccc-cCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChh--HHHHHHHHH
Q 042816 76 GIECA-KSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEK--DIHVVMERI 152 (163)
Q Consensus 76 g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~--~l~~~~~~l 152 (163)
|+.+. .|.|.++.|.+++... ...++.+++..+++++||.+.||..|.. .++++||+++..+.+ +++...+.|
T Consensus 289 g~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~ll~~~gV~v~~g~~~~~-~~~~lRi~~~~~~~~~~~l~~l~~~l 364 (374)
T 2aeu_A 289 NIVYERTPTGFVIKRVYKDDTI---NIKKLIEIGFNLLKNYGIITITVAGMPG-ASKSLRIDLTSRDAERIDDNYIIKAI 364 (374)
T ss_dssp EEEEEECSSEEEEEEEESSHHH---HHHHHHHHHHHHHHHHCEECSTTSSSCS-SCCSEEEETTSGGGGGSCHHHHHHHH
T ss_pred CcceeeCCceEEEEeecccccc---cccchHHHHHHHHHhCCEEEecCCCCCC-CCCeEEEEcCCchHHHHHHHHHHHHH
Confidence 55654 4666666676654311 0012344777777778999999988743 367999999742222 377777777
Q ss_pred HHHHHHhhh
Q 042816 153 RRISQTCKS 161 (163)
Q Consensus 153 ~~~~~~~~~ 161 (163)
.++++++..
T Consensus 365 ~~~l~~~~~ 373 (374)
T 2aeu_A 365 VESIKMAFK 373 (374)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhc
Confidence 777776643
No 107
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.45 E-value=2.1e-13 Score=106.00 Aligned_cols=152 Identities=10% Similarity=0.005 Sum_probs=100.7
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc--ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCc
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR--FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL-GIE 78 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~ 78 (163)
++. |+|+||+++ ++++++.+..... .++.|+++|.++..+|+.... +++.++.++.....++.+.+.+..+ ++.
T Consensus 296 ~~~-G~~~G~~~~-~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 372 (453)
T 4ffc_A 296 IAG-GMPLSAVTG-RAELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRE-LDLPARARAIEASVTSRLSALAEEVDIIG 372 (453)
T ss_dssp GGT-TSSCEEEEE-EHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHHCSSEE
T ss_pred hcC-CcCeEEEEE-CHHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence 455 899999999 8999888775544 367899999988888864311 2333444444444444455544555 333
Q ss_pred cccCCceeEEEeecCCc-ccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CChhHHHHHHHHHHHHH
Q 042816 79 CAKSNGGFYCWADMSGL-ISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LTEKDIHVVMERIRRIS 156 (163)
Q Consensus 79 ~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~~l~~~~~~l~~~~ 156 (163)
..++. |.++|+++... ...+......++++.|++ +||.+.|+..| .+++||+++. ++++++++++++|.+++
T Consensus 373 ~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~~~l 446 (453)
T 4ffc_A 373 EVRGR-GAMLAIEIVKPGTLEPDAALTKSIAAEALS-QGVLILTCGTF----GNVIRLLPPLVIGDDLLDEGITALSDII 446 (453)
T ss_dssp EEEEE-TTEEEEEEBCTTSCCBCHHHHHHHHHHHHH-TTEECCEECTT----SCEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEEee-ceEEEEEEecCcccCCCHHHHHHHHHHHHh-CCCEEecCCCC----CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 33333 55777777431 011122356788888886 89999997554 3689998764 48899999999999999
Q ss_pred HHhhhc
Q 042816 157 QTCKSH 162 (163)
Q Consensus 157 ~~~~~~ 162 (163)
+++..+
T Consensus 447 ~~~~~~ 452 (453)
T 4ffc_A 447 RAKASH 452 (453)
T ss_dssp HHHC--
T ss_pred HHHHhc
Confidence 876543
No 108
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.45 E-value=4.8e-13 Score=100.58 Aligned_cols=142 Identities=11% Similarity=0.072 Sum_probs=106.3
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHh--------------hcccCCChHHHHHHHHhcCChHHHHH-HHHHHHHHHHHHHH
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKL--------------ARFSSVSAPSQNLLVSMLSDTKFVQK-FININRERLRRLYV 66 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~--------------~~~~~~s~~~q~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~ 66 (163)
||++| +||+++ ++++++.+... ....+++.+.|.++..+++.-. +. .+++.++.++++++
T Consensus 199 ~g~~G--~G~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~ 273 (362)
T 2c0r_A 199 LGPSG--VTVVIV-REDLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIE--ERGGLEGVQQANRKKAS 273 (362)
T ss_dssp TCCSS--CEEEEE-EGGGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHH--HTTHHHHHHHHHHHHHH
T ss_pred ccCcC--cEEEEE-cHHHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHH--HhCCHHHHHHHHHHHHH
Confidence 68888 999999 77776555331 1124678888888888886431 22 57889999999999
Q ss_pred HHHHHhhhcC-C-cccc---CCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-C
Q 042816 67 KFVAGLRQLG-I-ECAK---SNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-L 140 (163)
Q Consensus 67 ~l~~~l~~~g-~-~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~ 140 (163)
++.+.|+++| + ++.. ..++.++|+.++... ++.++++.|.+ +||.+.||..| .+++|||++. .
T Consensus 274 ~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~L~~-~gi~~~~g~~~----~~~iRis~~~~~ 342 (362)
T 2c0r_A 274 LIYDAIDQSGGFYRGCVDVDSRSDMNITFRLASEE------LEKEFVKASEQ-EGFVGLKGHRS----VGGLRASIYNAV 342 (362)
T ss_dssp HHHHHHHTSTTSSEESSCGGGBCSSEEEEECSCHH------HHHHHHHHHHH-TTEESCBCCTT----TCSEEEECCTTS
T ss_pred HHHHHHHHcCCccccCCChHHcCCcEEEEEcCCcc------hHHHHHHHHHH-CCCeeccCCCC----CCEEEEECCCCC
Confidence 9999999886 6 6532 234566888887532 67889988765 89999998766 3579999974 3
Q ss_pred ChhHHHHHHHHHHHHHHHh
Q 042816 141 TEKDIHVVMERIRRISQTC 159 (163)
Q Consensus 141 ~~~~l~~~~~~l~~~~~~~ 159 (163)
+.++++.+++.|+++++++
T Consensus 343 ~~e~i~~l~~~l~~~~~~~ 361 (362)
T 2c0r_A 343 PYESCEALVQFMEHFKRSR 361 (362)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhc
Confidence 6789999999999887754
No 109
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.43 E-value=8.8e-12 Score=93.93 Aligned_cols=140 Identities=14% Similarity=0.129 Sum_probs=106.5
Q ss_pred eeEEEEEecCHHHHHHH-------------HHhhc-----------cc-CCChHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 042816 7 FRISVIYSYNNSVLAAA-------------KKLAR-----------FS-SVSAPSQNLLVSMLSDTKFVQKFININRERL 61 (163)
Q Consensus 7 ~RiG~~i~~~~~~~~~~-------------~~~~~-----------~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 61 (163)
.++||+++ ++++++.+ ..... .+ +++...+.++...++.-. +..+++.++.+
T Consensus 195 ~g~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~--~~~~~~~~~~~ 271 (384)
T 3zrp_A 195 AGLGLLLL-SPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIE--KEGIENRIKRH 271 (384)
T ss_dssp SSEEEEEE-CHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHH--HHCHHHHHHHH
T ss_pred CceEEEEE-CHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHH--hcCHHHHHHHH
Confidence 44999999 88888777 22221 12 456666666656665321 23378899999
Q ss_pred HHHHHHHHHHhhhcCCccccCC----ceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEE
Q 042816 62 RRLYVKFVAGLRQLGIECAKSN----GGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSF 137 (163)
Q Consensus 62 ~~~~~~l~~~l~~~g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~ 137 (163)
+++++++.+.|+++|+++..+. ++.++|+.++. . +..++.+.|.+ +||.+.||..+.. +++||++
T Consensus 272 ~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~l~~-~gi~v~~g~~~~~---~~iRi~~ 340 (384)
T 3zrp_A 272 TMVASAIRAGLEALGLEIVARRPESYSNTVTGVILKV-A------DPQKVLAGTVN-EGVEFAPGVHPAF---KYFRIGH 340 (384)
T ss_dssp HHHHHHHHHHHHHTTCCBSCSSGGGBCSSEEEEECSS-S------CHHHHHHHHHT-TTCCCEECCCTTC---CEEEEEC
T ss_pred HHHHHHHHHHHHHCCCeEccCcccccCccEEEEECCC-C------CHHHHHHHHHH-CCEEEecCCCCCc---CEEEEec
Confidence 9999999999999888888777 67788888886 2 67899998887 6999999875432 8999998
Q ss_pred ec-CChhHHHHHHHHHHHHHHHhh
Q 042816 138 TL-LTEKDIHVVMERIRRISQTCK 160 (163)
Q Consensus 138 ~~-~~~~~l~~~~~~l~~~~~~~~ 160 (163)
.. .++++++++++.|.+++++++
T Consensus 341 ~~~~~~e~i~~~~~~l~~~l~~~~ 364 (384)
T 3zrp_A 341 MGWVTPNDAIIAISVIERTLRKLG 364 (384)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred cccCCHHHHHHHHHHHHHHHHHcC
Confidence 63 378999999999999998765
No 110
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.43 E-value=1.8e-13 Score=103.29 Aligned_cols=129 Identities=14% Similarity=0.111 Sum_probs=98.6
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHh--hcccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKL--ARFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIEC 79 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~ 79 (163)
|+ +|+|+||+++ ++++++.+... ...++++++.|.++..+|+.. + +..+.++++++++.+.|++++...
T Consensus 243 ~~-~g~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~----~~~~~~~~~~~~l~~~L~~~~~~~ 313 (375)
T 2eh6_A 243 LG-GGVPIGAILA-REEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEV---E----KLLPHVREVGNYFKEKLKELGKGK 313 (375)
T ss_dssp GG-TTSCCEEEEE-EHHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHH---H----HHHHHHHHHHHHHHHHHHHTTSSE
T ss_pred cc-CCCCeEEEEE-cHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHH---H----HHHHHHHHHHHHHHHHHHHHhcCC
Confidence 45 6899999999 78888777652 223567888888877776543 2 667788888999999998875444
Q ss_pred ccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEe-cCChhHHHHHHHHHHHH
Q 042816 80 AKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFT-LLTEKDIHVVMERIRRI 155 (163)
Q Consensus 80 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~-~~~~~~l~~~~~~l~~~ 155 (163)
.+ ..|+++|++++. +..++++.|.+ +||.+.|+ +++++||+++ ..+++++++++++|.++
T Consensus 314 ~~-~~g~~~~~~~~~--------~~~~~~~~l~~-~gi~~~~~------~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 314 VK-GRGLMLGLELER--------ECKDYVLKALE-KGLLINCT------AGKVLRFLPPLIIQKEHIDRAISVLREI 374 (375)
T ss_dssp EE-EETTEEEEECSS--------CCHHHHHHHHH-TTEECEEE------TTTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred ce-EEEEEEEEEEcC--------cHHHHHHHHHH-CCCEEecC------CCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 43 456788999874 35778888876 89999986 2689999986 35889999999999875
No 111
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.41 E-value=4.5e-13 Score=103.82 Aligned_cols=152 Identities=7% Similarity=0.035 Sum_probs=99.4
Q ss_pred CCCCc-eeEEEEEecCHHHHHHHHH---hh-----cccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHh
Q 042816 2 LSLPG-FRISVIYSYNNSVLAAAKK---LA-----RFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGL 72 (163)
Q Consensus 2 ~~~~G-~RiG~~i~~~~~~~~~~~~---~~-----~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l 72 (163)
++. | +|+||+++ ++++++.+.. .. ..++.++++|.++...|+..+. ++..++.++..+..++.+.+.+
T Consensus 286 l~~-G~~~ig~~~~-~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~ 362 (452)
T 3n5m_A 286 ITS-AYLPLSATAV-KREIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIEN-ENLIERSAQMGSLLLEQLKEEI 362 (452)
T ss_dssp GGT-TSSCCEEEEE-EHHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccC-CCcceEEEEE-CHHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHH
Confidence 455 8 99999999 9999988854 11 1357889999988888764321 2334444444444444444444
Q ss_pred hhc-CCccccCCceeEEEeecCCcccCC---ChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CChhHHHH
Q 042816 73 RQL-GIECAKSNGGFYCWADMSGLISSY---SEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LTEKDIHV 147 (163)
Q Consensus 73 ~~~-g~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~~l~~ 147 (163)
.++ ++...++.|. ++++++....... ......++++.|++ +||.+.|+..|....++++||+++. ++++++++
T Consensus 363 ~~~~~~~~~~~~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~ 440 (452)
T 3n5m_A 363 GEHPLVGDIRGKGL-LVGIELVNDKETKEPIDNDKIASVVNACKE-KGLIIGRNGMTTAGYNNILTLAPPLVISSEEIAF 440 (452)
T ss_dssp TTCTTEEEEEESSS-CEEEEEEEETTTTEECCHHHHHHHHHHHHH-TTEECEECTTSSTTCCCEEEECCCTTCCHHHHHH
T ss_pred hcCCCeEEEEEEEE-EEEEEEecCCcccCCCCHHHHHHHHHHHHH-CCcEEeecCcccCCCCCEEEEECCCCCCHHHHHH
Confidence 444 3444555555 5566664211000 01123578888876 8999999988765557899997543 38899999
Q ss_pred HHHHHHHHHHH
Q 042816 148 VMERIRRISQT 158 (163)
Q Consensus 148 ~~~~l~~~~~~ 158 (163)
++++|.+++++
T Consensus 441 ~l~~l~~~l~~ 451 (452)
T 3n5m_A 441 VIGTLKTAMER 451 (452)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 112
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.41 E-value=1.2e-12 Score=99.52 Aligned_cols=140 Identities=12% Similarity=0.057 Sum_probs=97.8
Q ss_pred CCCCceeEEEEEecCHHH-HHHHHHhhc--ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CC
Q 042816 2 LSLPGFRISVIYSYNNSV-LAAAKKLAR--FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL-GI 77 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~-~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~ 77 (163)
|+. |+|+||+++ ++++ ++.+..... .++.++++|.++..+++.... +++.++.++..+..++.+.+.+..+ .+
T Consensus 250 ~~~-G~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 326 (395)
T 3nx3_A 250 LGC-GLSVGAFVI-NQKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKE-EKILENVNKLTPYLEQSLDELINEFDFC 326 (395)
T ss_dssp GTT-TSCCEEEEE-CHHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHHCTTE
T ss_pred ccC-CCceEEEEE-chhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 454 899999999 8888 888765533 367899999988888764211 2334445554444555555555444 23
Q ss_pred ccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CChhHHHHHHHHHHHHH
Q 042816 78 ECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LTEKDIHVVMERIRRIS 156 (163)
Q Consensus 78 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~~l~~~~~~l~~~~ 156 (163)
...++ .|.++|++++... +..++.+.|++ +||.+.|+. ++++||+++. .+++++++++++|.+++
T Consensus 327 ~~~~~-~g~~~~~~~~~~~------~~~~~~~~l~~-~Gi~v~~~~------~~~iRi~~~~~~t~e~i~~~l~~l~~~l 392 (395)
T 3nx3_A 327 KKRKG-LGFMQGLSLDKSV------KVAKVIQKCQE-NALLLISCG------ENDLRFLPPLILQKEHIDEMSEKLRKAL 392 (395)
T ss_dssp EEEEE-ETTEEEEEECTTS------CHHHHHHHHHH-TTEECEEET------TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEe-EEEEEEEEeCCcc------hHHHHHHHHHH-CCCEEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 33333 3567888887532 56788888876 899999863 6899998654 38899999999999987
Q ss_pred HH
Q 042816 157 QT 158 (163)
Q Consensus 157 ~~ 158 (163)
++
T Consensus 393 ~~ 394 (395)
T 3nx3_A 393 KS 394 (395)
T ss_dssp HT
T ss_pred Hh
Confidence 64
No 113
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.41 E-value=3.4e-12 Score=96.86 Aligned_cols=144 Identities=15% Similarity=0.206 Sum_probs=106.2
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc----------------------c-cCCChHHHHHHH-HhcCChHHHHHHHHHH
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR----------------------F-SSVSAPSQNLLV-SMLSDTKFVQKFININ 57 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~----------------------~-~~~s~~~q~~~~-~~l~~~~~~~~~~~~~ 57 (163)
||.+| +||+++ ++++++.+..... + .+++.+.|.++. ..++.-. +.++++.
T Consensus 228 ~g~~G--~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~ 302 (406)
T 1kmj_A 228 YGPTG--IGILYV-KEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVS--ALGLNNI 302 (406)
T ss_dssp TSCTT--CEEEEE-CHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHH--HHCHHHH
T ss_pred cCCCC--cEEEEE-eHHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHH--HcCHHHH
Confidence 67788 899999 8999888764431 1 235666666444 4443221 2356788
Q ss_pred HHHHHHHHHHHHHHhhhc-CCccccC--CceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCC------C
Q 042816 58 RERLRRLYVKFVAGLRQL-GIECAKS--NGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHC------I 128 (163)
Q Consensus 58 ~~~~~~~~~~l~~~l~~~-g~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~------~ 128 (163)
++.++++++++.+.|+++ |+++..| .++++.| .++.. +..++.+.|.+ +||.+.||..|.. .
T Consensus 303 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~l~~-~gi~v~~g~~~~~~~~~~~g 373 (406)
T 1kmj_A 303 AEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAF-NLGKH-------HAYDVGSFLDN-YGIAVRTGHHCAMPLMAYYN 373 (406)
T ss_dssp HHHHHHHHHHHHHHHTTSTTEEEESCTTCCSEEEE-EETTC-------CHHHHHHHHHH-TTEECEEECTTCHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEecCCCcCCEEEE-EECCC-------CHHHHHHHHhh-CCcEEEeccccchHHHHhcC
Confidence 899999999999999998 8888887 7887776 56531 56778877765 8999999986532 1
Q ss_pred CCceEEEEEecC-ChhHHHHHHHHHHHHHHHh
Q 042816 129 EPGWFSFSFTLL-TEKDIHVVMERIRRISQTC 159 (163)
Q Consensus 129 ~~~~iRi~~~~~-~~~~l~~~~~~l~~~~~~~ 159 (163)
.++++||+++.. ++++++.+++.|.++++.+
T Consensus 374 ~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 374 VPAMCRASLAMYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp CSCEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeecCCCHHHHHHHHHHHHHHHHhh
Confidence 268999999863 7889999999999988765
No 114
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.40 E-value=4.3e-13 Score=103.47 Aligned_cols=150 Identities=15% Similarity=0.137 Sum_probs=96.7
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc--ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCc
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR--FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL-GIE 78 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~ 78 (163)
|| +|+|+||+++ ++++++.+..... .+ .++++|.++..+++.... +++.++.++..+..++.+.+.+..+ .+.
T Consensus 272 ~~-~G~riG~~~~-~~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 347 (439)
T 3dxv_A 272 LG-GGLPLSAVIA-PAEILDCASAFAMQTLH-GNPISAAAGLAVLETIDR-DDLPAMAERKGRLLRDGLSELAKRHPLIG 347 (439)
T ss_dssp GG-TTSCCEEEEE-EHHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHHCTTEE
T ss_pred hc-CCcceEEEEE-CHHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 56 5999999999 8999888776533 35 888888888887764321 2233333333333334444433334 234
Q ss_pred cccCCceeEEEeecCCcc--cCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CChhHHHHHHHHHHHH
Q 042816 79 CAKSNGGFYCWADMSGLI--SSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LTEKDIHVVMERIRRI 155 (163)
Q Consensus 79 ~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~~l~~~~~~l~~~ 155 (163)
..++. |.++|+++.... ..+...+..++++.|++ +||.+.|+..+ ++++||+++. .+++++++++++|.++
T Consensus 348 ~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~~~ 421 (439)
T 3dxv_A 348 DIRGR-GLACGMELVCDRQSREPARAETAKLIYRAYQ-LGLVVYYVGMN----GNVLEFTPPLTITETDIHKALDLLDRA 421 (439)
T ss_dssp EEEEE-TTEEEEEEEEETTTTEECHHHHHHHHHHHHH-HTEECEEESTT----SCEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEE-EEEEEEEEecCccccCCCHHHHHHHHHHHHH-CCcEEeecCCC----CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 44444 556777762100 00111256788998887 79999997432 4799998654 3889999999999999
Q ss_pred HHHhhh
Q 042816 156 SQTCKS 161 (163)
Q Consensus 156 ~~~~~~ 161 (163)
++++.+
T Consensus 422 l~~~~~ 427 (439)
T 3dxv_A 422 FSELSA 427 (439)
T ss_dssp HHTGGG
T ss_pred HHHHhc
Confidence 987643
No 115
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.40 E-value=4.2e-12 Score=97.32 Aligned_cols=136 Identities=17% Similarity=0.146 Sum_probs=90.3
Q ss_pred CCCCCceeE-EEEEecCHHHHH-HHHHhhccc---CCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 042816 1 DLSLPGFRI-SVIYSYNNSVLA-AAKKLARFS---SVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL 75 (163)
Q Consensus 1 ~~~~~G~Ri-G~~i~~~~~~~~-~~~~~~~~~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 75 (163)
.||+||+|+ ||+++ ++++++ .+......+ +++++.|.++...+++. +..+++.. ++.+.+.+.+++.
T Consensus 210 ~~~~~g~ri~G~~~~-~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~~~---~~~~~~~~----~~~~~l~~~l~~~ 281 (404)
T 1e5e_A 210 YINGHTDVVAGLICG-KADLLQQIRMVGIKDITGSVISPHDAWLITRGLSTL---NIRMKAES----ENAMKVAEYLKSH 281 (404)
T ss_dssp TTTCSSCCCCEEEEE-CHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTTH---HHHHHHHH----HHHHHHHHHHHTC
T ss_pred ccCCCCCCeEEEEEE-CHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHhHH---HHHHHHHH----HHHHHHHHHHHhC
Confidence 489999998 99999 888888 887776644 47888898888888864 22333322 3333333333332
Q ss_pred ---------------CCccccCC----ceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCC---------
Q 042816 76 ---------------GIECAKSN----GGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHC--------- 127 (163)
Q Consensus 76 ---------------g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~--------- 127 (163)
|+++.+|+ |+|+.| +++. . .+....++++.|| +.+|..|+.
T Consensus 282 ~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~-~~~~--------~-~~~~~~~l~~~~i-~~~~~s~G~~~sl~~~~~ 350 (404)
T 1e5e_A 282 PAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITF-ILKS--------G-FEGAKKLLDNLKL-ITLAVSLGGCESLIQHPA 350 (404)
T ss_dssp TTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEE-EETT--------H-HHHHHHHHHTCSS-SEESSCCCSSSCEEECGG
T ss_pred CCeeEEECCCCCCCccHHHHHhhCCCCceEEEE-EeCC--------C-HHHHHHHHHhCCC-ceeccCCCCcceeeeccc
Confidence 33444444 888888 7763 2 2334446666899 666766652
Q ss_pred --------------CC--CceEEEEEecCChhHHHHHHHHHHHHHHH
Q 042816 128 --------------IE--PGWFSFSFTLLTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 128 --------------~~--~~~iRi~~~~~~~~~l~~~~~~l~~~~~~ 158 (163)
.+ ++++|||++. |+++++++.|.++++.
T Consensus 351 ~~~~~~~~~~~~~~~g~~~~~iRis~g~---e~~~~li~~l~~al~~ 394 (404)
T 1e5e_A 351 SMTHAVVPKEEREAAGITDGMIRLSVGI---EDADELIADFKQGLDA 394 (404)
T ss_dssp GTTTTTSCHHHHHHTTCCTTEEEEECCS---SCHHHHHHHHHHHHHH
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEeCC---CCHHHHHHHHHHHHHH
Confidence 12 6899999996 7788888888777654
No 116
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.39 E-value=4.2e-12 Score=95.17 Aligned_cols=141 Identities=9% Similarity=0.012 Sum_probs=101.6
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhh-------------c-ccCCChHHHHHHHHhcCChHHHHH-HHHHHHHHHHHHHH
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLA-------------R-FSSVSAPSQNLLVSMLSDTKFVQK-FININRERLRRLYV 66 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~-------------~-~~~~s~~~q~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~ 66 (163)
||++| +||+++ ++++++.+.... . ..+++...+.++..+++.-. +. .+++.++.++++++
T Consensus 198 ~~~~G--~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~--~~~~~~~~~~~~~~~~~ 272 (360)
T 1w23_A 198 LGPSG--VTVVIV-KKDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIK--DLGGAEAIAKQNEEKAK 272 (360)
T ss_dssp TSCTT--CEEEEE-EHHHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHH--HTTHHHHHHHHHHHHHH
T ss_pred cCCCC--cEEEEE-cHHHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHH
Confidence 67677 999999 888876554432 1 12445666666666664321 12 57888999999999
Q ss_pred HHHHHhhhcC-C-ccc-cC--CceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-C
Q 042816 67 KFVAGLRQLG-I-ECA-KS--NGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-L 140 (163)
Q Consensus 67 ~l~~~l~~~g-~-~~~-~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~ 140 (163)
++.+.|++++ + ... .| .+++++|++++.. .+..++.+.|.+ +||.+.||..+ ++++||+++. .
T Consensus 273 ~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~-~gi~~~~~~~~----~~~iRis~~~~~ 341 (360)
T 1w23_A 273 IIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNE------ELNQQFLAKAKE-QGFVGLNGHRS----VGGCRASIYNAV 341 (360)
T ss_dssp HHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSH------HHHHHHHHHHHH-TTEESCBCCTT----TCSEEEECCTTS
T ss_pred HHHHHHHHccCcccccCCchhccCcEEEEEcCCC------ccHHHHHHHHHH-CCeeeecCCCC----CCeEEEEecCCC
Confidence 9999999884 5 432 23 4577899998753 256788888765 89999998754 5789999984 3
Q ss_pred ChhHHHHHHHHHHHHHHH
Q 042816 141 TEKDIHVVMERIRRISQT 158 (163)
Q Consensus 141 ~~~~l~~~~~~l~~~~~~ 158 (163)
++++++.+++.|.+++++
T Consensus 342 ~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 342 PIDACIALRELMIQFKEN 359 (360)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhh
Confidence 788999999999887653
No 117
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.39 E-value=2.6e-12 Score=99.92 Aligned_cols=146 Identities=10% Similarity=0.012 Sum_probs=103.0
Q ss_pred eeEEEEEecCHHHHHHHHHh-------hc--ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-C
Q 042816 7 FRISVIYSYNNSVLAAAKKL-------AR--FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL-G 76 (163)
Q Consensus 7 ~RiG~~i~~~~~~~~~~~~~-------~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g 76 (163)
+|+||+++ ++++++.+... .. .++.++++|.++..+|+.... +++.++.++..+..++.+.+.++++ +
T Consensus 297 ~~lg~v~~-~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~ 374 (460)
T 3gju_A 297 APLSGVIV-ADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDE-MDLVTNAGETGAYFRAELAKAVGGHKN 374 (460)
T ss_dssp SCCEEEEE-EHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHTTSTT
T ss_pred CCeEEEEE-CHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 89999999 99999998642 11 357899999988888874321 3456677777777777777777776 3
Q ss_pred CccccCCceeEEEeecCCccc-CC----ChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEe-cCChhHHHHHHH
Q 042816 77 IECAKSNGGFYCWADMSGLIS-SY----SEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFT-LLTEKDIHVVME 150 (163)
Q Consensus 77 ~~~~~~~~g~~~~~~~~~~~~-~~----~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~-~~~~~~l~~~~~ 150 (163)
+...++.|. ++++++..... .. ......++++.|++ +||.+.|+. .++++||+.. .+++++++++++
T Consensus 375 ~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~-----~~~~iRi~~~~~~t~e~i~~~l~ 447 (460)
T 3gju_A 375 VGEVRGDGM-LAAVEFVADKDDRVFFDASQKIGPQVATALAA-SGVIGRAMP-----QGDILGFAPPLCLTREQADIVVS 447 (460)
T ss_dssp EEEEEEETT-EEEEEECSBTTTTBCCCGGGCHHHHHHHHHHH-TTEECEECS-----SSCEEEECCCTTCCHHHHHHHHH
T ss_pred eEEEeeeeE-EEEEEEccCccccccccchHHHHHHHHHHHHH-CCeEEecCC-----CCCEEEEECCCCCCHHHHHHHHH
Confidence 555555554 56666653210 00 00125678888887 899999865 2589999954 248899999999
Q ss_pred HHHHHHHHhhh
Q 042816 151 RIRRISQTCKS 161 (163)
Q Consensus 151 ~l~~~~~~~~~ 161 (163)
+|.+++++...
T Consensus 448 ~l~~~l~~~~~ 458 (460)
T 3gju_A 448 KTADAVKSVFA 458 (460)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHHh
Confidence 99999987653
No 118
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.39 E-value=7.3e-13 Score=102.84 Aligned_cols=148 Identities=7% Similarity=0.014 Sum_probs=97.0
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc--ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCc
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR--FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL-GIE 78 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~ 78 (163)
++. |+|+||+++ ++++++.+..... .++.++++|.++..+|+.... +++.++.++..+..++.+.+.+..+ .+.
T Consensus 298 l~~-G~~iG~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 374 (451)
T 3oks_A 298 IAG-GLPLSAVTG-RAEIMDSPHVSGLGGTYGGNPIACAAALATIETIES-EGLVARAQQIEKIMKDRLGRLQAEDDRIG 374 (451)
T ss_dssp GGT-TSSCEEEEE-EHHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHHCTTEE
T ss_pred hhC-CcceEEEEE-CHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence 444 899999999 8999888765444 367899999988888864311 2233444444444444444444444 233
Q ss_pred cccCCceeEEEeecCCc-ccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CChhHHHHHHHHHHHHH
Q 042816 79 CAKSNGGFYCWADMSGL-ISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LTEKDIHVVMERIRRIS 156 (163)
Q Consensus 79 ~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~~l~~~~~~l~~~~ 156 (163)
..++. |.++|+++... ...+...+..++++.|++ +||.+.|+..|+ +++||+++. ++++++++++++|.+++
T Consensus 375 ~~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~----~~iRi~~~~~~t~e~i~~~l~~l~~~l 448 (451)
T 3oks_A 375 DVRGR-GAMIAMELVKAGTTEPDADLTKALCAGAHA-AGVIVLSCGTYG----NVVRFLPPLSIGDDLLNEGLDVLEEVL 448 (451)
T ss_dssp EEEEE-TTEEEEEEBSTTSCCBCHHHHHHHHHHHHH-TTEECEEECTTS----CEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEe-eEEEEEEEecCccCCCCHHHHHHHHHHHHh-CCcEEecCCCCC----CEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 33333 55777776321 001122356788888886 899999975543 689998764 38899999999999987
Q ss_pred HH
Q 042816 157 QT 158 (163)
Q Consensus 157 ~~ 158 (163)
++
T Consensus 449 ~~ 450 (451)
T 3oks_A 449 RG 450 (451)
T ss_dssp HC
T ss_pred hh
Confidence 64
No 119
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.38 E-value=5.2e-13 Score=102.60 Aligned_cols=133 Identities=8% Similarity=0.064 Sum_probs=97.2
Q ss_pred CCCCc-eeEEEEEecCHHHHHHHH-HhhcccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc
Q 042816 2 LSLPG-FRISVIYSYNNSVLAAAK-KLARFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIEC 79 (163)
Q Consensus 2 ~~~~G-~RiG~~i~~~~~~~~~~~-~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~ 79 (163)
|| +| +|+||+++ +++++ .+. .....++.|+++|.++..+|+.. ++ .++.++++++++.+.|+++ +..
T Consensus 283 ~~-~G~~riG~~~~-~~~~~-~~~~~~~~t~~~n~~~~~aa~aal~~~---~~----~~~~~~~~~~~l~~~L~~~-~~~ 351 (419)
T 2eo5_A 283 LG-GGIMPIGATIF-RKDLD-FKPGMHSNTFGGNALACAIGSKVIDIV---KD----LLPHVNEIGKIFAEELQGL-ADD 351 (419)
T ss_dssp GG-TTTSCCEEEEE-EGGGC-CC------CCCCCHHHHHHHHHHHHHH---HH----HHHHHHHHHHHHHHHHTTS-SSE
T ss_pred cc-CCccceEEEEE-chHhh-cCCcccCCCCCCCHHHHHHHHHHHHHH---HH----HHHHHHHHHHHHHHHHHHh-hhh
Confidence 56 48 99999999 77777 662 11223678999999998888643 22 7788888999999999876 444
Q ss_pred ccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CChhHHHHHHHHHHHHHHH
Q 042816 80 AKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 80 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~~l~~~~~~l~~~~~~ 158 (163)
.++.| .++|+++.... ..+. +++.|++ +||.+.|+. ++++||+++. .+++++++++++|.+++++
T Consensus 352 ~~~~g-~~~~i~~~~~~-----~~~~-~~~~l~~-~Gv~v~~~~------~~~lRis~~~~~t~e~i~~~l~~l~~~l~~ 417 (419)
T 2eo5_A 352 VRGIG-LAWGLEYNEKK-----VRDR-IIGESFK-RGLLLLPAG------RSAIRVIPPLVISEEEAKQGLDILKKVIKV 417 (419)
T ss_dssp EEEET-TEEEEECSCHH-----HHHH-HHHHHHH-TTEECEEET------TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred eEeee-EEEEEEEecCc-----cHHH-HHHHHHH-CCCEEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 45554 56677884210 1345 8888875 899999863 5799998752 4889999999999998876
Q ss_pred h
Q 042816 159 C 159 (163)
Q Consensus 159 ~ 159 (163)
+
T Consensus 418 ~ 418 (419)
T 2eo5_A 418 V 418 (419)
T ss_dssp C
T ss_pred c
Confidence 4
No 120
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.38 E-value=1.1e-12 Score=100.96 Aligned_cols=150 Identities=11% Similarity=0.044 Sum_probs=94.5
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhh-----cccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLA-----RFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLG 76 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~-----~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 76 (163)
|| +|+|+||+++ ++++++.+.... ..++.++++|.++...++.... +++.++.++..+..++.+.+.+..++
T Consensus 272 ~~-~G~~iG~~~~-~~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~ 348 (434)
T 3l44_A 272 IG-GGLPIGAYGG-KKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQ-EGLYEKLDELGATLEKGILEQAAKHN 348 (434)
T ss_dssp GG-TTSSCEEEEE-CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS-TTHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hc-CCcCeeeEEE-cHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 55 7999999999 999998887632 1367888999887777652110 12233333333333334444444444
Q ss_pred CccccCCceeEEEeecCCcc-c------CCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHH
Q 042816 77 IECAKSNGGFYCWADMSGLI-S------SYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVM 149 (163)
Q Consensus 77 ~~~~~~~~g~~~~~~~~~~~-~------~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~ 149 (163)
+....+..|.++++++.... . .+......++++.|++ +||.+.|+. .+++|+++.. +++++++++
T Consensus 349 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~------~~~~rl~~~~-t~e~i~~~l 420 (434)
T 3l44_A 349 IDITLNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQ-EGVNLAPSK------YEAWFLTTEH-TKEDIEYTI 420 (434)
T ss_dssp CCEEEEEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHH-TTEECCSST------TCCEECCTTC-CHHHHHHHH
T ss_pred CCEEEEeeccEEEEEEecCcccchhhccccCHHHHHHHHHHHHH-CCeEEeecC------CCcEEEeccc-CHHHHHHHH
Confidence 33223334455666663210 0 0111234678888876 899999863 3568998665 999999999
Q ss_pred HHHHHHHHHhhhc
Q 042816 150 ERIRRISQTCKSH 162 (163)
Q Consensus 150 ~~l~~~~~~~~~~ 162 (163)
++|.+++++++.+
T Consensus 421 ~~l~~~l~~~~~~ 433 (434)
T 3l44_A 421 EAVGRAFAALADN 433 (434)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhc
Confidence 9999999887653
No 121
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.38 E-value=1.4e-13 Score=104.83 Aligned_cols=135 Identities=13% Similarity=0.133 Sum_probs=98.5
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc--ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CC
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR--FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL--GI 77 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--g~ 77 (163)
|+ +|+|+||+++ +++++ .+..... .++.+++.|.++..+|+.. ++ ++.++.++++++++.+.|++. ++
T Consensus 254 ~~-~G~r~G~~~~-~~~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~--~~~~~~~~~~~~~l~~~L~~~~~~~ 325 (397)
T 2ord_A 254 LG-GGVPIGAVIV-NERAN-VLEPGDHGTTFGGNPLACRAGVTVIKEL---TK--EGFLEEVEEKGNYLMKKLQEMKEEY 325 (397)
T ss_dssp GG-TTSCCEEEEE-CSTTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHH---TS--TTHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cC-CCcCeEEEEE-chHhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHH---Hh--CCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 56 7999999999 66665 5543222 3567889998888877542 22 456778888888888888775 34
Q ss_pred cc---ccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEe-cCChhHHHHHHHHHH
Q 042816 78 EC---AKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFT-LLTEKDIHVVMERIR 153 (163)
Q Consensus 78 ~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~-~~~~~~l~~~~~~l~ 153 (163)
.. .++ .|.++|++++... +..++++.|.+ +||.+.||. ++++||+++ ..+++++++++++|.
T Consensus 326 ~~~~~~~~-~g~~~~~~~~~~~------~~~~l~~~l~~-~gi~v~~~~------~~~iRis~~~~~~~e~i~~~~~~l~ 391 (397)
T 2ord_A 326 DVVADVRG-MGLMIGIQFREEV------SNREVATKCFE-NKLLVVPAG------NNTIRFLPPLTVEYGEIDLAVETLK 391 (397)
T ss_dssp TTEEEEEE-ETTEEEEEECTTS------CHHHHHHHHHH-TTEECEEET------TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred CceEEEEE-EeEEEEEEECChH------HHHHHHHHHHH-CCCEEccCC------CCEEEEECCcCCCHHHHHHHHHHHH
Confidence 43 233 3567788887532 57889998887 899999872 579999965 248899999999999
Q ss_pred HHHHH
Q 042816 154 RISQT 158 (163)
Q Consensus 154 ~~~~~ 158 (163)
+++++
T Consensus 392 ~~l~~ 396 (397)
T 2ord_A 392 KVLQG 396 (397)
T ss_dssp HHHHT
T ss_pred HHHhh
Confidence 88764
No 122
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.37 E-value=2.2e-12 Score=99.22 Aligned_cols=136 Identities=9% Similarity=0.016 Sum_probs=97.3
Q ss_pred Cc-eeEEEEEecCHHHHHHHHHh------h-cccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-
Q 042816 5 PG-FRISVIYSYNNSVLAAAKKL------A-RFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL- 75 (163)
Q Consensus 5 ~G-~RiG~~i~~~~~~~~~~~~~------~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~- 75 (163)
+| +|+||+++ ++++++.+... . ..++.|+++|.++..+++.- .+ +...+.++++++++.+.|+++
T Consensus 278 ~G~~~iG~~~~-~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~---~~--~~~~~~~~~~~~~l~~~L~~l~ 351 (429)
T 1s0a_A 278 GGTMTLSATLT-TREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAIL---ES--GDWQQQVADIEVQLREQLAPAR 351 (429)
T ss_dssp TSSSCCEEEEE-CHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHH---HT--CHHHHHHHHHHHHHHHHHGGGG
T ss_pred CCCccceEEEe-CHHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHH---Hh--CCHHHHHHHHHHHHHHHHHHHh
Confidence 47 99999999 89999988763 1 13567899998887777532 11 123455556677777777664
Q ss_pred ---CCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEe-cCChhHHHHHHHH
Q 042816 76 ---GIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFT-LLTEKDIHVVMER 151 (163)
Q Consensus 76 ---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~-~~~~~~l~~~~~~ 151 (163)
++...++.| .++|++++... +..++.+.|++ +||.+.|+ .+++||+++ ..+++++++++++
T Consensus 352 ~~~~~~~~~~~g-~~~~~~~~~~~------~~~~l~~~l~~-~Gi~v~~~-------~~~iRis~~~~~t~e~i~~~~~~ 416 (429)
T 1s0a_A 352 DAEMVADVRVLG-AIGVVETTHPV------NMAALQKFFVE-QGVWIRPF-------GKLIYLMPPYIILPQQLQRLTAA 416 (429)
T ss_dssp GCTTEEEEEEET-TEEEEEESSCB------CHHHHHHHHHH-TTEECCCB-------TTEEEECCCTTCCHHHHHHHHHH
T ss_pred cCCCEEEEEEee-EEEEEEECCcc------cHHHHHHHHHH-CCCEEecc-------CCEEEEECCCCCCHHHHHHHHHH
Confidence 333344554 57888987532 56788888886 89999883 268999965 2488999999999
Q ss_pred HHHHHHHhhh
Q 042816 152 IRRISQTCKS 161 (163)
Q Consensus 152 l~~~~~~~~~ 161 (163)
|.+++++++.
T Consensus 417 l~~~~~~~~~ 426 (429)
T 1s0a_A 417 VNRAVQDETF 426 (429)
T ss_dssp HHHHTSSGGG
T ss_pred HHHHHHhhhc
Confidence 9998876654
No 123
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.37 E-value=8.1e-13 Score=100.45 Aligned_cols=134 Identities=16% Similarity=0.120 Sum_probs=99.2
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc--ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR--FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIEC 79 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~ 79 (163)
|+. |+|+||+++ ++++++.+..... .++++++.|.++..+++.. ++ +...+.++++++++.+.|++.+..+
T Consensus 256 ~~~-g~~~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~---~~--~~~~~~~~~~~~~l~~~l~~~~~~~ 328 (395)
T 1vef_A 256 LGG-GVPLGVAVM-REEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYL---ER--TRLWERAAELGPWFMEKLRAIPSPK 328 (395)
T ss_dssp GGT-TSSCEEEEE-EHHHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHH---HH--HTTHHHHHHHHHHHHHHHHTSCCTT
T ss_pred ccC-CCceEEEEe-hHHHHhhhccCCcCCCcCCCHHHHHHHHHHHHHH---Hh--CCHHHHHHHHHHHHHHHHHHhhcCc
Confidence 555 899999999 7888777655222 3567888888887777643 22 4567788888899999998875432
Q ss_pred --ccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEe-cCChhHHHHHHHHHHHHH
Q 042816 80 --AKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFT-LLTEKDIHVVMERIRRIS 156 (163)
Q Consensus 80 --~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~-~~~~~~l~~~~~~l~~~~ 156 (163)
..+..|.++|++++. +..++++.|++++||.+.|+ +++++||+++ ..+++++++++++|.+++
T Consensus 329 ~~~~~~~g~~~~~~~~~--------~~~~l~~~l~~~~gi~v~~~------~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 329 IREVRGMGLMVGLELKE--------KAAPYIARLEKEHRVLALQA------GPTVIRFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp EEEEEEETTEEEEEESS--------CSHHHHHHHHHHHCEECEES------STTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEEEEEEEEcC--------hHHHHHHHHHHHCCeEEecC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 123456788988874 34778888883489999986 2689999876 248899999999998875
No 124
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.36 E-value=2.5e-12 Score=97.90 Aligned_cols=142 Identities=11% Similarity=0.081 Sum_probs=103.5
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc--ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcC---
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR--FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLG--- 76 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g--- 76 (163)
|+ +|+|+||+++ ++++++.+..... .++.+++.|.++...++... . ++.++.++++++++.+.|++.+
T Consensus 254 ~~-~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---~--~~~~~~~~~~~~~l~~~l~~~~~~~ 326 (406)
T 4adb_A 254 LG-GGFPVGALLA-TEECARVMTVGTHGTTYGGNPLASAVAGKVLELIN---T--PEMLNGVKQRHDWFVERLNTINHRY 326 (406)
T ss_dssp GG-TTSCCEEEEE-CHHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHS---S--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hc-CCCCeEEEEE-cHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHH---h--cCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 56 8999999999 9999888876544 36788999998887775421 1 4566667777777777776652
Q ss_pred -CccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CChhHHHHHHHHHHH
Q 042816 77 -IECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LTEKDIHVVMERIRR 154 (163)
Q Consensus 77 -~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~~l~~~~~~l~~ 154 (163)
.....+..|.++|+.++... ..+..++++.|.+ +||.+.|+. ++++|++++. .+++++++++++|.+
T Consensus 327 ~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~l~~-~gi~v~~~~------~~~iRi~~~~~~~~e~i~~~~~~l~~ 395 (406)
T 4adb_A 327 GLFSEVRGLGLLIGCVLNADY----AGQAKQISQEAAK-AGVMVLIAG------GNVVRFAPALNVSEEEVTTGLDRFAA 395 (406)
T ss_dssp CCEEEEEEETTEEEEEECTTT----TTCHHHHHHHHHH-TTEECEESS------TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred CCceEEEEEEEEEEEEEeCCc----HHHHHHHHHHHHH-CCcEEeecC------CCeEEEECCCCCCHHHHHHHHHHHHH
Confidence 11122334778888887521 0146889998887 799999853 6899996443 388999999999999
Q ss_pred HHHHhhh
Q 042816 155 ISQTCKS 161 (163)
Q Consensus 155 ~~~~~~~ 161 (163)
+++++..
T Consensus 396 ~l~~~~~ 402 (406)
T 4adb_A 396 ACEHFVS 402 (406)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9987754
No 125
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.36 E-value=8.8e-13 Score=99.71 Aligned_cols=137 Identities=15% Similarity=0.219 Sum_probs=99.8
Q ss_pred CCCceeEEEEEecCHHHHHHHHHhh----------------------c--ccCCChHHHHHHHHhcCChHHHHHHHHHHH
Q 042816 3 SLPGFRISVIYSYNNSVLAAAKKLA----------------------R--FSSVSAPSQNLLVSMLSDTKFVQKFININR 58 (163)
Q Consensus 3 ~~~G~RiG~~i~~~~~~~~~~~~~~----------------------~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~ 58 (163)
..+|.++||+++ ++++++.+.... . ..+++.+.|.++..+++.-.. ..++++.+
T Consensus 222 ~~~~~g~G~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~-~~~~~~~~ 299 (390)
T 1elu_A 222 FAGPAGVGGLYI-HGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQR-QGTAEERY 299 (390)
T ss_dssp TCCCTTCEEEEE-CTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHH-HCCHHHHH
T ss_pred ccCCCceEEEEE-CHHhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHH-cCCHHHHH
Confidence 455677999999 788877665421 1 234566777766665543211 23478889
Q ss_pred HHHHHHHHHHHHHhhhc-CCccc---cCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEE
Q 042816 59 ERLRRLYVKFVAGLRQL-GIECA---KSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFS 134 (163)
Q Consensus 59 ~~~~~~~~~l~~~l~~~-g~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iR 134 (163)
+.++++++++.+.|+++ |+++. ++.++++.| +++... +..++.+.|.+ +||.+.||. .++++|
T Consensus 300 ~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~l~~-~gi~v~~~~-----~~~~iR 366 (390)
T 1elu_A 300 QAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSF-TVDSPL------GHRAIVQKLEE-QRIYLRTIA-----DPDCIR 366 (390)
T ss_dssp HHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEE-EECSSS------CHHHHHHHHHH-TTEECEEET-----TTTEEE
T ss_pred HHHHHHHHHHHHHHHhcCCcEEecCccccccEEEE-EcCCCC------CHHHHHHHHHH-CCEEEEecC-----CCCeEE
Confidence 99999999999999998 88777 346787766 876432 57889998865 899999986 268999
Q ss_pred EEEe-cCChhHHHHHHHHHHH
Q 042816 135 FSFT-LLTEKDIHVVMERIRR 154 (163)
Q Consensus 135 i~~~-~~~~~~l~~~~~~l~~ 154 (163)
|++. ..+++++++++++|.+
T Consensus 367 is~~~~~~~~~i~~~~~~l~~ 387 (390)
T 1elu_A 367 ACCHYITDEEEINHLLARLAD 387 (390)
T ss_dssp EECCTTCCHHHHHHHHHHHTT
T ss_pred EecccCCCHHHHHHHHHHHHh
Confidence 9984 2488999999888864
No 126
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.36 E-value=8.6e-12 Score=95.13 Aligned_cols=146 Identities=13% Similarity=0.189 Sum_probs=105.3
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhcc----------------------cCCChHHHHHHHH-hcCChHHHHHHHHHHH
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLARF----------------------SSVSAPSQNLLVS-MLSDTKFVQKFININR 58 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~~----------------------~~~s~~~q~~~~~-~l~~~~~~~~~~~~~~ 58 (163)
+|.+| +||+++ ++++++.+...... .+++.+.|.++.. .++.-. +..+++.+
T Consensus 233 ~~~~g--~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~ 307 (420)
T 1t3i_A 233 CAPTG--IGFLYG-KEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLT--DLGMENIH 307 (420)
T ss_dssp TSCTT--CEEEEE-CHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHH--HHCHHHHH
T ss_pred cCCCc--eEEEEE-chHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHH--HhHHHHHH
Confidence 67778 999999 89998887654321 2456666665433 343211 12467888
Q ss_pred HHHHHHHHHHHHHhhhc-CCccccCC------ceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCC---
Q 042816 59 ERLRRLYVKFVAGLRQL-GIECAKSN------GGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCI--- 128 (163)
Q Consensus 59 ~~~~~~~~~l~~~l~~~-g~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~--- 128 (163)
+.++++++++.+.|+++ |+++..|. ++++.| .++.. +..++.+.|.+ +||.+.||..|..+
T Consensus 308 ~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~l~~-~gi~v~~~~~~~~~~~~ 378 (420)
T 1t3i_A 308 NYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASF-NVAGL-------HASDVATMVDQ-DGIAIRSGHHCTQPLHR 378 (420)
T ss_dssp HHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEE-EETTB-------CHHHHHHHHHT-TTEECBCSCTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCeEEeCCCccccccCCEEEE-EECCC-------CHHHHHHHHHH-CCeEEeeccccchHHHH
Confidence 99999999999999998 88887664 666655 67641 56778877755 89999999765321
Q ss_pred --C-CceEEEEEec-CChhHHHHHHHHHHHHHHHhhh
Q 042816 129 --E-PGWFSFSFTL-LTEKDIHVVMERIRRISQTCKS 161 (163)
Q Consensus 129 --~-~~~iRi~~~~-~~~~~l~~~~~~l~~~~~~~~~ 161 (163)
+ ++++||+++. .++++++.+++.|.++++.+++
T Consensus 379 ~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~~~~ 415 (420)
T 1t3i_A 379 LFDASGSARASLYFYNTKEEIDLFLQSLQATIRFFSD 415 (420)
T ss_dssp HTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHHHTC-
T ss_pred hcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 2 6799999985 3888999999999999887654
No 127
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.35 E-value=1.9e-11 Score=92.16 Aligned_cols=140 Identities=12% Similarity=0.089 Sum_probs=101.4
Q ss_pred CCCceeEEEEEecCHHHHH-HHH----------------------Hhhc-----ccCCChHHHHHHHHhcCChHHHHHH-
Q 042816 3 SLPGFRISVIYSYNNSVLA-AAK----------------------KLAR-----FSSVSAPSQNLLVSMLSDTKFVQKF- 53 (163)
Q Consensus 3 ~~~G~RiG~~i~~~~~~~~-~~~----------------------~~~~-----~~~~s~~~q~~~~~~l~~~~~~~~~- 53 (163)
|.+|+ ||+++ ++++++ .+. .... ..+++.+.+.++..+++.- .+.
T Consensus 205 ~~~G~--G~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~~ 278 (385)
T 2bkw_A 205 APAGL--SISLC-SSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEI---LEEG 278 (385)
T ss_dssp CCSCE--EEEEE-CHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHH---HHHC
T ss_pred cCCcc--eEEEE-cHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHH---HHcc
Confidence 35665 99999 887766 431 1111 1246666777666666542 233
Q ss_pred HHHHHHHHHHHHHHHHHHh-hhcCCccccC-----CceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCC
Q 042816 54 ININRERLRRLYVKFVAGL-RQLGIECAKS-----NGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHC 127 (163)
Q Consensus 54 ~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~ 127 (163)
+++.++.++++++++.+.| +++|+++..+ ..+.++|++++. ..++.+.|.+ +||.+.||..+..
T Consensus 279 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~-~gi~v~~g~~~~~ 348 (385)
T 2bkw_A 279 LHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMSAHGLTAVYVAD---------PPDVIAFLKS-HGVVIAGGIHKDI 348 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSSTTBCSSCEEEECSC---------HHHHHHHHHH-TTEECBCCCCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCceecccCcccccCCceEEEecCC---------HHHHHHHHHH-CCeEEeCCCCccc
Confidence 6788889999999999999 8778777653 257788988873 4678888875 8999999987542
Q ss_pred CCCceEEEE-Ee----cCChhHHHHHHHHHHHHHHHh
Q 042816 128 IEPGWFSFS-FT----LLTEKDIHVVMERIRRISQTC 159 (163)
Q Consensus 128 ~~~~~iRi~-~~----~~~~~~l~~~~~~l~~~~~~~ 159 (163)
.++++||+ ++ ..+++++++++++|.++++++
T Consensus 349 -~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~~ 384 (385)
T 2bkw_A 349 -GPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQRK 384 (385)
T ss_dssp -GGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC-
T ss_pred -CCCEEEEEccccccccCCHHHHHHHHHHHHHHHHhc
Confidence 36899999 76 247899999999999887654
No 128
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.35 E-value=1.4e-11 Score=92.31 Aligned_cols=133 Identities=8% Similarity=-0.074 Sum_probs=93.6
Q ss_pred EEEEecCHHHHHHHHHhhccc----CCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcc-ccCC
Q 042816 10 SVIYSYNNSVLAAAKKLARFS----SVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL-GIEC-AKSN 83 (163)
Q Consensus 10 G~~i~~~~~~~~~~~~~~~~~----~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~-~~~~ 83 (163)
||+++ ++++++.+....... ....+.+.++...|+ .+.++.+ .+.++++++.+.|+++ |+++ ..|.
T Consensus 214 g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------~~~~~~~-~~~~~~~~l~~~L~~~~g~~~~~~~~ 285 (357)
T 3lws_A 214 AILAG-PAAFCQTARIWKRRYGGDLISLYPYIVSADYYYE------LRKDRMG-QYYEQAKQLAEQFNALPGVHTTPEVP 285 (357)
T ss_dssp EEEEE-CHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHH------HHTTCHH-HHHHHHHHHHHHHHTSTTEEEESSSC
T ss_pred EEEEc-CHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHH------HHHHHHH-HHHHHHHHHHHHHHhCCCCeeccCCC
Confidence 99999 999999988765432 223333433333332 2333433 3577888999999998 8888 4577
Q ss_pred ceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec----CChhHHHHHHHHHHHHH
Q 042816 84 GGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL----LTEKDIHVVMERIRRIS 156 (163)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~----~~~~~l~~~~~~l~~~~ 156 (163)
+++|+|++++... ..+..++.+.|.+ +||.+.||..|. ++..++|++++. .+.+++++++++|.+++
T Consensus 286 ~~~~~~~~~~~~~----~~~~~~~~~~l~~-~Gi~v~~g~~~~-~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 286 VSNMFHLHFDGQA----ADISPKLEQVQEE-TGLGFVGYLVDK-DGYCSTEISVGDAYGELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp SSSEEEEEEESCH----HHHHHHHHHHHHH-HCEESCSCCEEC-SSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred cceEEEEEecCCh----HHHHHHHHHHHHh-cCeEEecccccC-CCceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence 8889999997531 0135677777765 899999997665 345699999873 37789999999998764
No 129
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.34 E-value=3.9e-12 Score=95.90 Aligned_cols=146 Identities=17% Similarity=0.135 Sum_probs=102.5
Q ss_pred CCCCceeEEEEEecCHHH-HHHHHH------hhcccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 042816 2 LSLPGFRISVIYSYNNSV-LAAAKK------LARFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQ 74 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~-~~~~~~------~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 74 (163)
+|.+| +||+++ +++. +..... .....+++.+.+.++..+++.. .+.+++.++.++++++++.+.|++
T Consensus 201 ~g~~g--~G~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~---~~~~~~~~~~~~~~~~~l~~~L~~ 274 (382)
T 4eb5_A 201 YGPKG--VGALWI-RKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAAEIT---AMEWREEAERLRRLRDRIIDNVLK 274 (382)
T ss_dssp TCCSS--CEEEEE-ETTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCCCc--eEEEEE-ccccccCceecCCCccccccCCCccHHHHHHHHHHHHHH---HHhHHHHHHHHHHHHHHHHHHHhh
Confidence 45556 699999 4442 111100 0112345666666666666532 345788999999999999999998
Q ss_pred c-CCccccCCc---eeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCC-----------------CCceE
Q 042816 75 L-GIECAKSNG---GFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCI-----------------EPGWF 133 (163)
Q Consensus 75 ~-g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~-----------------~~~~i 133 (163)
+ |+++..+.+ +.++|+.++. . +..++.+.|.+ +||.+.||..|... .++++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~l~~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~i 346 (382)
T 4eb5_A 275 IEESYLNGHPEKRLPNNVNVRFSY-I------EGESIVLSLDM-AGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTL 346 (382)
T ss_dssp STTEEECSCSSSBCTTEEEEEETT-S------CHHHHHHHHHH-HTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEE
T ss_pred CCCeEEeCCcccCCCCEEEEEeCC-c------CHHHHHHHHHH-CCEEEeccccccCCCCcccHHHHHcCCChhccCCeE
Confidence 8 877776642 4457777763 2 56789988875 89999999865431 25799
Q ss_pred EEEEec-CChhHHHHHHHHHHHHHHHhhh
Q 042816 134 SFSFTL-LTEKDIHVVMERIRRISQTCKS 161 (163)
Q Consensus 134 Ri~~~~-~~~~~l~~~~~~l~~~~~~~~~ 161 (163)
||+++. .+++++++++++|.++++++++
T Consensus 347 Ri~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (382)
T 4eb5_A 347 LLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999983 3789999999999999988775
No 130
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.34 E-value=2.6e-12 Score=98.85 Aligned_cols=139 Identities=14% Similarity=0.127 Sum_probs=96.7
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHh--hcccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc--C-
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKL--ARFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL--G- 76 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--g- 76 (163)
+| +|+|+||+++ ++++++.+... ...++.|++.|.++...|+.-. + +...+.++++.+++.+.|++. +
T Consensus 272 l~-~G~~iG~~~~-~~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~---~--~~~~~~~~~~~~~l~~~L~~~~~~~ 344 (420)
T 2pb2_A 272 LG-GGFPVSAMLT-TQEIASAFHVGSHGSTYGGNPLACAVAGAAFDIIN---T--PEVLQGIHTKRQQFVQHLQAIDEQF 344 (420)
T ss_dssp GG-TTSCCEEEEE-CHHHHTTCC----CCEECCCHHHHHHHHHHHHHHS---S--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc-CCCceEEEEE-hHHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHH---h--ccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 56 7999999999 88887766542 2235788999988877765321 1 244556666677777766654 2
Q ss_pred --CccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEe-cCChhHHHHHHHHHH
Q 042816 77 --IECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFT-LLTEKDIHVVMERIR 153 (163)
Q Consensus 77 --~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~-~~~~~~l~~~~~~l~ 153 (163)
+...++. |.++|++++.... .+..++++.|++ +||.+.|+. ++++||+++ ..+++++++++++|.
T Consensus 345 ~~~~~~~~~-g~~~~v~~~~~~~----~~~~~l~~~l~~-~Gi~v~~~~------~~~iRl~~~~~~t~eei~~~~~~l~ 412 (420)
T 2pb2_A 345 DIFSDIRGM-GLLIGAELKPKYK----GRARDFLYAGAE-AGVMVLNAG------ADVMRFAPSLVVEEADIHEGMQRFA 412 (420)
T ss_dssp CCEEEEEEE-TTEEEEEECGGGT----TCHHHHHHHHHH-TTEECEESS------TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred CCeEEEEec-ceEEEEEECCCch----HHHHHHHHHHHH-CCCEEEeCC------CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 2223444 5667888864210 146789998887 899999863 579999965 248899999999999
Q ss_pred HHHHHh
Q 042816 154 RISQTC 159 (163)
Q Consensus 154 ~~~~~~ 159 (163)
++++++
T Consensus 413 ~~l~~~ 418 (420)
T 2pb2_A 413 QAVGKV 418 (420)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988765
No 131
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.34 E-value=1.3e-12 Score=99.18 Aligned_cols=128 Identities=16% Similarity=0.196 Sum_probs=100.0
Q ss_pred eeEEEEEecCHHHHHHHHHhhc--ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcC---Ccccc
Q 042816 7 FRISVIYSYNNSVLAAAKKLAR--FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLG---IECAK 81 (163)
Q Consensus 7 ~RiG~~i~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g---~~~~~ 81 (163)
+|+||+++ ++++++.+..... .++.+++.|.++..+++.. +. ++.++.++++++++.+.|++++ +...+
T Consensus 258 ~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 331 (392)
T 3ruy_A 258 FPISCAAA-NRDILGVFEPGSHGSTFGGNPLACAVSIAALEVL---EE--EKLTERSLQLGEKLVGQLKEIDNPMITEVR 331 (392)
T ss_dssp SCCEEEEE-CHHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHH---HH--TTHHHHHHHHHHHHHHHHTTCCCTTEEEEE
T ss_pred hhhEEEEE-CHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHH---Hh--hhHHHHHHHHHHHHHHHHHHhcCCCceEEE
Confidence 99999999 8998887766554 3678999999998888753 22 6788889999999999998874 44455
Q ss_pred CCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CChhHHHHHHHHHHHHH
Q 042816 82 SNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LTEKDIHVVMERIRRIS 156 (163)
Q Consensus 82 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~~l~~~~~~l~~~~ 156 (163)
+.|+++.| .++. +..++.+.|.+ +||.+.||. ++++|+++.. .+++++++++++|.+++
T Consensus 332 ~~g~~~~~-~~~~--------~~~~l~~~l~~-~gi~v~~~~------~~~iRi~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 332 GKGLFIGI-ELNE--------PARPYCEQLKA-AGLLCKETH------ENVIRIAPPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp EETTEEEE-EESS--------CSHHHHHHHHT-TTEECCCBT------TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred eeeeEEEE-EEcc--------hHHHHHHHHHH-CCcEEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 66665555 5764 35788888875 899999864 6899999543 38899999999998875
No 132
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.34 E-value=1e-11 Score=94.85 Aligned_cols=141 Identities=16% Similarity=0.115 Sum_probs=104.3
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhcc----cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLARF----SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGI 77 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~~----~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 77 (163)
||++ .||+++ ++++++.+...... .+.+.+.+.++...++.. +. .++.++.++++++++.+.|++.|+
T Consensus 258 ~~~~---gg~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~---~~-~~~~~~~~~~~~~~l~~~L~~~g~ 329 (409)
T 3kki_A 258 FAYR---AGAIWC-NNEVNRCVPFISYPAIFSSTLLPYEAAGLETTLEII---ES-ADNRRQHLDRMARKLRIGLSQLGL 329 (409)
T ss_dssp TCSS---CEEEEE-SSSGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHH---HH-CHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred hCCC---ceEEEE-CHHHHHHHHHhCcCccccCCCcHHHHHHHHHHHHHH---hc-CHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5555 499999 88888877765442 234555555555555532 22 267888999999999999999887
Q ss_pred ccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCC-CCCCceEEEEEec-CChhHHHHHHHHHHHH
Q 042816 78 ECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCH-CIEPGWFSFSFTL-LTEKDIHVVMERIRRI 155 (163)
Q Consensus 78 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~-~~~~~~iRi~~~~-~~~~~l~~~~~~l~~~ 155 (163)
++. ..+.++|+.++.. .++.++++.|++ +||.+.|+..+. ..+++++||+++. .+++++++++++|.++
T Consensus 330 ~~~--~~~~~~~~~~~~~------~~~~~~~~~L~~-~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~ 400 (409)
T 3kki_A 330 TIR--SESQIIGLETGDE------RNTEKVRDYLES-NGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDA 400 (409)
T ss_dssp CCC--CSSSEEEEEEESH------HHHHHHHHHHHH-TTEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred ccC--CCCCEEEEEeCCH------HHHHHHHHHHHH-CCceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHH
Confidence 766 3677888888753 256789998887 699998865442 2347899999973 4889999999999999
Q ss_pred HHHh
Q 042816 156 SQTC 159 (163)
Q Consensus 156 ~~~~ 159 (163)
+++.
T Consensus 401 l~~~ 404 (409)
T 3kki_A 401 VNYG 404 (409)
T ss_dssp HHHS
T ss_pred HhcC
Confidence 8764
No 133
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.33 E-value=2.5e-11 Score=90.80 Aligned_cols=139 Identities=13% Similarity=0.023 Sum_probs=102.7
Q ss_pred CC-CCceeEEEEEecCHHHHHHHHHhhc-----------------------ccCCChHHHHHHHHhcCChHHHHHHHHHH
Q 042816 2 LS-LPGFRISVIYSYNNSVLAAAKKLAR-----------------------FSSVSAPSQNLLVSMLSDTKFVQKFININ 57 (163)
Q Consensus 2 ~~-~~G~RiG~~i~~~~~~~~~~~~~~~-----------------------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~ 57 (163)
|+ .+|+ |++++ ++++++.+..... ..+++...+.++..+++.-. +..+++.
T Consensus 193 ~~~~~G~--g~~~~-~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~--~~~~~~~ 267 (362)
T 3ffr_A 193 FGLPAGL--GVWIL-NDRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDML--QISADGI 267 (362)
T ss_dssp TCCCSCC--EEEEE-EHHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHH--HHCHHHH
T ss_pred cCCCCce--EEEEE-CHHHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHH--HccHHHH
Confidence 45 6774 77888 8888888776543 34567777777766665321 1226788
Q ss_pred HHHHHHHHHHHHHHhhhc-CCccccC----CceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCce
Q 042816 58 RERLRRLYVKFVAGLRQL-GIECAKS----NGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGW 132 (163)
Q Consensus 58 ~~~~~~~~~~l~~~l~~~-g~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~ 132 (163)
++.++++++++.+.|+++ |+++..+ .++.++|+.++. +..++.+.|.+ +||.+.||..+. .+++
T Consensus 268 ~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~-~gi~~~~g~~~~--~~~~ 336 (362)
T 3ffr_A 268 RKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTTM--------LPGEINKILEP-FDMAVGAGYGSK--KETQ 336 (362)
T ss_dssp HHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEESS--------CHHHHHHHHGG-GTEEEEECSGGG--TTTE
T ss_pred HHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecCC--------CHHHHHHHHHH-CCeEEecCcccc--CCCE
Confidence 889999999999999998 8877652 356778888874 46889998887 699999985543 3689
Q ss_pred EEEEEec-CChhHHHHHHHHHHHHH
Q 042816 133 FSFSFTL-LTEKDIHVVMERIRRIS 156 (163)
Q Consensus 133 iRi~~~~-~~~~~l~~~~~~l~~~~ 156 (163)
+||++.. .++++++.+++.|.+++
T Consensus 337 iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 337 IRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHh
Confidence 9999974 37788888888887653
No 134
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.32 E-value=2.9e-11 Score=90.61 Aligned_cols=139 Identities=10% Similarity=0.010 Sum_probs=95.7
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhccc--CC--ChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-C
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLARFS--SV--SAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL-G 76 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~~~--~~--s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g 76 (163)
++.|+ . ||++. ++++++.+....... ++ ..+.+.++...+ +.+.++. +.+.++++.+.+.|+++ |
T Consensus 210 ~~~~~-g-g~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~l------~~~~~~~-~~~~~~~~~l~~~L~~~~g 279 (359)
T 3pj0_A 210 IGGIA-G-AILAG-NDDFVQEAKIWKRRYGGDLISLYPYILSADYYF------EKRIGKM-AEYFEAAKGLAERFNSCSG 279 (359)
T ss_dssp TCCSS-C-EEEEE-CHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHH------HHHGGGH-HHHHHHHHHHHHHHHTSTT
T ss_pred CCCcc-e-EEEEC-CHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHH------HHHHHHh-HHHHHHHHHHHHHHhhCCC
Confidence 45552 2 88888 999999998765421 22 233333333332 2333333 34678888999999998 8
Q ss_pred Cccc-cCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec----CChhHHHHHHHH
Q 042816 77 IECA-KSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL----LTEKDIHVVMER 151 (163)
Q Consensus 77 ~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~----~~~~~l~~~~~~ 151 (163)
+++. .|.++.++|++++... ..+..++.+.|.+ +||.+.||..|+..+.+++|++++. .+.+++++++++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~l~~-~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~ 354 (359)
T 3pj0_A 280 VKTVPEVPVSNMFHVYFENSA----DEIGAILTKIQDE-TGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRC 354 (359)
T ss_dssp EEEESSSCSSSEEEEEESSCH----HHHHHHHHHHHHH-HCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHH
T ss_pred ceeeccCCcceEEEEEecCcc----chhHHHHHHHHHh-cCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHH
Confidence 8885 5677778888876421 0146678877765 8999999988876567899999973 378889999999
Q ss_pred HHHH
Q 042816 152 IRRI 155 (163)
Q Consensus 152 l~~~ 155 (163)
|.+.
T Consensus 355 l~~~ 358 (359)
T 3pj0_A 355 LEKE 358 (359)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 8765
No 135
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.32 E-value=3.3e-11 Score=92.08 Aligned_cols=148 Identities=8% Similarity=-0.017 Sum_probs=100.2
Q ss_pred CCceeEEEEEecCHHHHHHHHHhhccc---CCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc
Q 042816 4 LPGFRISVIYSYNNSVLAAAKKLARFS---SVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIECA 80 (163)
Q Consensus 4 ~~G~RiG~~i~~~~~~~~~~~~~~~~~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 80 (163)
++|.|+||++++++++.+.+....... +++...+.++...+... ..++++..++.+.++.+++.+.|++.|+++.
T Consensus 237 l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 314 (425)
T 3ecd_A 237 LRGPRGGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEA--LTDDFKTYIDRVLANAQALGDVLKAGGVDLV 314 (425)
T ss_dssp GCCCSCEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHH--TSHHHHHHHHHHHHHHHHHHHHHHHTTCEEG
T ss_pred cCCCCcEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHHH--HHHhHHHHHHHHHHHHHHHHHHHHhCCCeec
Confidence 478999999994477888777655432 33444444333333221 1245678888899999999999998888877
Q ss_pred cC-CceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEc----CCCCCCCCCCceEEEEEec-----CChhHHHHHHH
Q 042816 81 KS-NGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVT----PGSSCHCIEPGWFSFSFTL-----LTEKDIHVVME 150 (163)
Q Consensus 81 ~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~----pg~~f~~~~~~~iRi~~~~-----~~~~~l~~~~~ 150 (163)
.+ .+++++|++++... .+...+.+.|. ++||.+. ||..+....++++|+++.. .++++++++++
T Consensus 315 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~-~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~ 388 (425)
T 3ecd_A 315 TGGTDNHLLLVDLRPKG-----LKGAQVEQALE-RAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGR 388 (425)
T ss_dssp GGSCSSSEEEEECGGGT-----CCHHHHHHHHH-HTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHH
T ss_pred cCCCCceEEEEEeCCCC-----CCHHHHHHHHH-HcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHH
Confidence 54 46788898886421 14566666664 4899999 5543333335789998543 23688999999
Q ss_pred HHHHHHHHh
Q 042816 151 RIRRISQTC 159 (163)
Q Consensus 151 ~l~~~~~~~ 159 (163)
.|.+++++.
T Consensus 389 ~l~~~l~~~ 397 (425)
T 3ecd_A 389 LILEVFEAL 397 (425)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhcc
Confidence 998888764
No 136
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.32 E-value=1.3e-11 Score=93.25 Aligned_cols=136 Identities=8% Similarity=-0.051 Sum_probs=96.7
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhccc-------------CCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHH
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLARFS-------------SVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKF 68 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~~~-------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 68 (163)
+..+|+|+||+++.++.+.+.+.....++ +.+.+.|.++...+. ...+++..+.+.++++++
T Consensus 247 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~~~~~~~l 321 (397)
T 3f9t_A 247 MGHCPIPSGGILFKDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLG-----REGQRKIVNECMENTLYL 321 (397)
T ss_dssp TTCCCSSCEEEEESSGGGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCceEEEEeCHHHHHhhccCCccccCCCccccccccccchHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHH
Confidence 45678899999995555655543322221 123455666655553 244567777788899999
Q ss_pred HHHhhhcCCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CChhHHHH
Q 042816 69 VAGLRQLGIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LTEKDIHV 147 (163)
Q Consensus 69 ~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~~l~~ 147 (163)
.+.|+++|+++..+..+.++|++++ +..++.+.|.+ +||.+.||.. ++++||+++. .+++++++
T Consensus 322 ~~~L~~~g~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~-~gi~v~~~~~-----~~~~Ri~~~~~~~~e~i~~ 386 (397)
T 3f9t_A 322 YKKLKENNFKPVIEPILNIVAIEDE---------DYKEVCKKLRD-RGIYVSVCNC-----VKALRIVVMPHIKREHIDN 386 (397)
T ss_dssp HHHHHHTTCCBSSCCSSSEEEEECT---------THHHHHHHHHH-TTCBCEECSS-----SSEEEEECCTTCCHHHHHH
T ss_pred HHHHHHCCCEEEcCCCccEEEEEeC---------CHHHHHHHHHh-CCeEEeccCC-----CCEEEEEEcCCCCHHHHHH
Confidence 9999998887555555566777776 35788888877 7999999753 5899999983 48899999
Q ss_pred HHHHHHHHHH
Q 042816 148 VMERIRRISQ 157 (163)
Q Consensus 148 ~~~~l~~~~~ 157 (163)
+++.|.++++
T Consensus 387 ~~~~l~~~l~ 396 (397)
T 3f9t_A 387 FIEILNSIKR 396 (397)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHhhC
Confidence 9999988764
No 137
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.32 E-value=4.1e-12 Score=97.85 Aligned_cols=142 Identities=12% Similarity=0.050 Sum_probs=96.3
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc-----ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR-----FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL- 75 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~-----~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~- 75 (163)
|| +|+|+||+++ ++++++.+..... .++.++++|.++...++..+ ++..+.++++.+++.+.|++.
T Consensus 270 ~~-~G~~iG~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~------~~~~~~~~~~~~~l~~~L~~~~ 341 (429)
T 3k28_A 270 IG-GGLPVGAYGG-KAEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT------PESYVEFERKAEMLEAGLRKAA 341 (429)
T ss_dssp GG-TTSCCEEEEE-CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hc-CCCCeEEEEE-cHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 45 4899999999 9999888865322 35788999998888887542 344555555666666655543
Q ss_pred ---C-CccccCCceeEEEeecCCcc-------cCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhH
Q 042816 76 ---G-IECAKSNGGFYCWADMSGLI-------SSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKD 144 (163)
Q Consensus 76 ---g-~~~~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~ 144 (163)
+ +...++.|. ++++.+...- ..+......++++.|++ +||.+.|+. .+++|+++.. ++++
T Consensus 342 ~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~------~~~~r~~~~~-t~e~ 412 (429)
T 3k28_A 342 EKHGIPHHINRAGS-MIGIFFTDEPVINYDAAKSSNLQFFAAYYREMVE-QGVFLPPSQ------FEGLFLSTVH-SDAD 412 (429)
T ss_dssp HHTTCCCEEEEETT-EEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHH-TTEECCSST------TSCBCCCTTC-CHHH
T ss_pred hhCCCCEEEEeecc-EEEEEEecCCcccccccccccHHHHHHHHHHHHH-CCeEEecCC------CCCEEEECCC-CHHH
Confidence 3 333444444 5555653210 00111245788888876 899999862 4578888765 9999
Q ss_pred HHHHHHHHHHHHHHhh
Q 042816 145 IHVVMERIRRISQTCK 160 (163)
Q Consensus 145 l~~~~~~l~~~~~~~~ 160 (163)
+++++++|.+++++++
T Consensus 413 i~~~l~~l~~~l~~~~ 428 (429)
T 3k28_A 413 IEATIAAAEIAMSKLK 428 (429)
T ss_dssp HHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999988754
No 138
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.31 E-value=9.7e-12 Score=96.64 Aligned_cols=146 Identities=5% Similarity=-0.015 Sum_probs=98.0
Q ss_pred CCceeEEEEEecCHHHHHHHHH---hh--cccCCChHHHHHHHHhcCChHHHHHHHHHHH-HHHHHHHHHHHHHhhhc-C
Q 042816 4 LPGFRISVIYSYNNSVLAAAKK---LA--RFSSVSAPSQNLLVSMLSDTKFVQKFININR-ERLRRLYVKFVAGLRQL-G 76 (163)
Q Consensus 4 ~~G~RiG~~i~~~~~~~~~~~~---~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~-g 76 (163)
.+|+|+||+++ ++++++.+.. .. ..++.++++|.++...|+.... +++.++.+ +.....++.+.+.|+++ +
T Consensus 292 gg~~~lg~v~~-~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 369 (459)
T 4a6r_A 292 SGYLPIGAVFV-GKRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRD-EGIVQRVKDDIGPYMQKRWRETFSRFEH 369 (459)
T ss_dssp TTSSCCEEEEE-CHHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHH-TCHHHHHHHTHHHHHHHHHHHHHTTCTT
T ss_pred CCCCCccceee-CHHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 34499999999 9999999873 22 2468899999998888874321 23445555 44455555555555555 3
Q ss_pred CccccCCceeEEEeecCCccc-C----CChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CChhHHHHHHH
Q 042816 77 IECAKSNGGFYCWADMSGLIS-S----YSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LTEKDIHVVME 150 (163)
Q Consensus 77 ~~~~~~~~g~~~~~~~~~~~~-~----~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~~l~~~~~ 150 (163)
+...++.|. ++++++..... . +......++++.|++ +||.+.|+. +++||+... .++++++++++
T Consensus 370 ~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~g-------~~iRi~~~~~~t~e~i~~~l~ 440 (459)
T 4a6r_A 370 VDDVRGVGM-VQAFTLVKNKAKRELFPDFGEIGTLCRDIFFR-NNLIMRACG-------DHIVSAPPLVMTRAEVDEMLA 440 (459)
T ss_dssp EEEEEEETT-EEEEEECSBTTTTBCCSSTTHHHHHHHHHHHH-TTEECEEET-------TEEEECCCTTCCHHHHHHHHH
T ss_pred eEEEEEEEE-EEEEEEecCccccccccchHHHHHHHHHHHHH-CCeEEecCC-------CEEEEECCCCCCHHHHHHHHH
Confidence 555566655 55556653210 0 001126788888887 799999862 799999542 38899999999
Q ss_pred HHHHHHHHhh
Q 042816 151 RIRRISQTCK 160 (163)
Q Consensus 151 ~l~~~~~~~~ 160 (163)
+|.+++.+..
T Consensus 441 ~l~~~l~~~~ 450 (459)
T 4a6r_A 441 VAERCLEEFE 450 (459)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999887653
No 139
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.31 E-value=5.1e-12 Score=97.88 Aligned_cols=145 Identities=12% Similarity=0.134 Sum_probs=96.3
Q ss_pred Cc-eeEEEEEecCHHHHHHHHH-------hhc--ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 042816 5 PG-FRISVIYSYNNSVLAAAKK-------LAR--FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQ 74 (163)
Q Consensus 5 ~G-~RiG~~i~~~~~~~~~~~~-------~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 74 (163)
+| +|+||+++ ++++++.+.. ... .++.++++|.++...|+..+. +++.++.++..+..++.+.+ +..
T Consensus 284 ~G~~~ig~v~~-~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~~~~~l~~-l~~ 360 (448)
T 3dod_A 284 GGYLPIAVTFA-TEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFES-ENIVEQVAEKSKKLHFLLQD-LHA 360 (448)
T ss_dssp TTSSCCEEEEE-EHHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHH-HTT
T ss_pred CCcCceEEEEE-CHHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHH-Hhc
Confidence 38 59999999 8999998876 222 357789999988888864321 23344555555555555555 544
Q ss_pred cC-CccccCCceeEEEeecCCcccC-C--Ch--hhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEe-cCChhHHHH
Q 042816 75 LG-IECAKSNGGFYCWADMSGLISS-Y--SE--KGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFT-LLTEKDIHV 147 (163)
Q Consensus 75 ~g-~~~~~~~~g~~~~~~~~~~~~~-~--~~--~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~-~~~~~~l~~ 147 (163)
+. +...++ .|.++|++++..... . .. ....++++.|++ +||.+.|+ .+++||+.+ .++++++++
T Consensus 361 ~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~-------~~~iRi~~~~~~t~e~i~~ 431 (448)
T 3dod_A 361 LPHVGDIRQ-LGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRE-LGMLTRPL-------GDVIAFLPPLASTAEELSE 431 (448)
T ss_dssp STTEEEEEE-ETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHH-TTEECCEE-------TTEEEECCCTTCCHHHHHH
T ss_pred CCCeEEEEe-eeEEEEEEEccCcccccccchhhHHHHHHHHHHHH-CCcEEecc-------CCEEEEECCCCCCHHHHHH
Confidence 43 223333 355778888653200 0 00 014678888887 79999986 278999654 248899999
Q ss_pred HHHHHHHHHHHhhh
Q 042816 148 VMERIRRISQTCKS 161 (163)
Q Consensus 148 ~~~~l~~~~~~~~~ 161 (163)
++++|.++++++..
T Consensus 432 ~l~~l~~~l~~~~~ 445 (448)
T 3dod_A 432 MVAIMKQAIHEVTS 445 (448)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999987654
No 140
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.31 E-value=5.5e-12 Score=96.95 Aligned_cols=146 Identities=10% Similarity=0.017 Sum_probs=93.3
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc-----ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR-----FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLG 76 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~-----~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 76 (163)
|+ +|+|+||+++ ++++++.+..... .++.+++++.++...++.... +++.++.++..+..++.+.+.+...+
T Consensus 269 ~~-~G~~~G~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~ 345 (427)
T 3fq8_A 269 IG-GGLPVGAYGG-KREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQ-PGTYEYLDQITKRLSDGLLAIAQETG 345 (427)
T ss_dssp GG-TTSSCEEEEE-CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS-TTHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hh-CCcceEEEEE-cHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 55 6999999999 9999988875322 246688888887777642110 12233333333333333444444444
Q ss_pred CccccCCceeEEEeecCCc-cc------CCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHH
Q 042816 77 IECAKSNGGFYCWADMSGL-IS------SYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVM 149 (163)
Q Consensus 77 ~~~~~~~~g~~~~~~~~~~-~~------~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~ 149 (163)
+....+..|+++|++++.. .. ........++++.|++ +||.+.|+.. .++|+++.. +++++++++
T Consensus 346 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~Gi~v~~~~~------~r~~~~~~~-t~e~i~~~l 417 (427)
T 3fq8_A 346 HAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLE-QGIYLAPSQF------EAGFTSLAH-TEEDIDATL 417 (427)
T ss_dssp CCCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHH-TTEECCSSTT------SCEECCTTC-CHHHHHHHH
T ss_pred CCeEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHHHH-CCcEEecCCC------CCEEeeCcC-CHHHHHHHH
Confidence 4444455677888888642 10 0111235678888876 8999998642 356666554 899999999
Q ss_pred HHHHHHHHH
Q 042816 150 ERIRRISQT 158 (163)
Q Consensus 150 ~~l~~~~~~ 158 (163)
++|.+++++
T Consensus 418 ~~l~~~l~~ 426 (427)
T 3fq8_A 418 AAARTVMSA 426 (427)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998865
No 141
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.30 E-value=4.5e-12 Score=97.57 Aligned_cols=146 Identities=12% Similarity=0.040 Sum_probs=95.8
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhh-----cccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLA-----RFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLG 76 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~-----~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 76 (163)
|| +|+|+||+++ ++++++.+.... ..++.+++.+.++...|+.... +++.++.++.....++.+.+.+..++
T Consensus 270 ~~-~G~~~G~~~~-~~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~ 346 (429)
T 4e77_A 270 IG-GGMPVGAFGG-RREVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQ-VGVYETLTELTDSLATGLRHAAKEEN 346 (429)
T ss_dssp GG-TTSCCEEEEE-CHHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTS-TTHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cc-CCCCeEEEEE-CHHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 45 6999999999 999998887532 1357888998877777652110 22333444433334444445445555
Q ss_pred CccccCCceeEEEeecCCccc--------CCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHH
Q 042816 77 IECAKSNGGFYCWADMSGLIS--------SYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVV 148 (163)
Q Consensus 77 ~~~~~~~~g~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~ 148 (163)
+....+..|.++|++++..-. ..+.....++++.|++ +||.+.|+. ...+|+++.. ++++++++
T Consensus 347 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~------~~~~~~~~~~-t~e~i~~~ 418 (429)
T 4e77_A 347 IPLVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLE-EGVYLAPSA------FEAGFMSLAH-SNEDIQKT 418 (429)
T ss_dssp CCCEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHH-TTEECCSST------TSCEECCTTC-CHHHHHHH
T ss_pred CceEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHHHH-CCeEEeecC------CCCEEEeccC-CHHHHHHH
Confidence 555555667888988875310 0011234788888887 799999874 2356777554 99999999
Q ss_pred HHHHHHHHHH
Q 042816 149 MERIRRISQT 158 (163)
Q Consensus 149 ~~~l~~~~~~ 158 (163)
+++|.+++++
T Consensus 419 l~~l~~~l~~ 428 (429)
T 4e77_A 419 VNAARRCFAK 428 (429)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 142
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.30 E-value=9.8e-12 Score=93.45 Aligned_cols=121 Identities=17% Similarity=0.126 Sum_probs=87.9
Q ss_pred CCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCccccCCc---eeEEEeecCCcccCCChhhHHH
Q 042816 31 SVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL-GIECAKSNG---GFYCWADMSGLISSYSEKGELE 106 (163)
Q Consensus 31 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~ 106 (163)
+++.+.+.++...+... .+++++.++.++++++++.+.|+++ |+++..+.+ +.++++.++.. +..+
T Consensus 234 ~~~~~~~~~~~~al~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 303 (382)
T 4hvk_A 234 SENVPSIVGFGKAAEIT---AMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYI-------EGES 303 (382)
T ss_dssp CCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTC-------CHHH
T ss_pred CcCHHHHHHHHHHHHHH---HhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEECCC-------CHHH
Confidence 34666666666666532 5678899999999999999999988 777776553 23555666542 6788
Q ss_pred HHHHHHHhcCeEEcCCCCCCCCC-----------------CceEEEEEec-CChhHHHHHHHHHHHHHHHhhhc
Q 042816 107 LWDKLLNVAKVNVTPGSSCHCIE-----------------PGWFSFSFTL-LTEKDIHVVMERIRRISQTCKSH 162 (163)
Q Consensus 107 ~~~~l~~~~gi~v~pg~~f~~~~-----------------~~~iRi~~~~-~~~~~l~~~~~~l~~~~~~~~~~ 162 (163)
+.+.|.+ +||.+.||..|.... ++++||+++. .+.++++.+++.|.++++++++.
T Consensus 304 ~~~~l~~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~~~ 376 (382)
T 4hvk_A 304 IVLSLDM-AGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRSM 376 (382)
T ss_dssp HHHHHHH-TTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHH-CCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 8888866 899999998776432 5899999984 36789999999999999887653
No 143
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.30 E-value=2.7e-11 Score=90.48 Aligned_cols=134 Identities=16% Similarity=0.214 Sum_probs=94.7
Q ss_pred ceeEE--EEEecCHHHHHHHHHhhccc----CCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCc
Q 042816 6 GFRIS--VIYSYNNSVLAAAKKLARFS----SVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL-GIE 78 (163)
Q Consensus 6 G~RiG--~~i~~~~~~~~~~~~~~~~~----~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~ 78 (163)
|.++| |+++ ++++++.+....... ..+...+..+...++++.+ ....+.+.++++++.+.|+++ |++
T Consensus 214 g~~~G~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~l~~~L~~~~g~~ 287 (356)
T 1v72_A 214 GVLAAEAIVLF-NTSLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTDDLW-----LRNARKANAAAQRLAQGLEGLGGVE 287 (356)
T ss_dssp TCSSCEEEEES-SGGGHHHHHHHHHHTTCCCSSTHHHHHHHHHHTSTTHH-----HHHHHHHHHHHHHHHHHHTTCTTEE
T ss_pred CCcCccEEEEE-CHHHHhhHHHHhhccCchhhhHHHHHHHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHHhhCCCcE
Confidence 44666 8888 888888776554321 1233344445566665432 234566778889999999887 888
Q ss_pred cccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CChhHHHHHHHHHHHHHH
Q 042816 79 CAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LTEKDIHVVMERIRRISQ 157 (163)
Q Consensus 79 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~~l~~~~~~l~~~~~ 157 (163)
+..|.+++++|++++ .++.+.|.+ +||.+.||. |+ ++++|++++. .+++++++++++|.++++
T Consensus 288 ~~~~~~~~~~~~~~~-----------~~~~~~l~~-~gi~v~~g~-~~---~~~iRi~~~~~~~~~~i~~~~~~l~~~l~ 351 (356)
T 1v72_A 288 VLGGTEANILFCRLD-----------SAMIDALLK-AGFGFYHDR-WG---PNVVRFVTSFATTAEDVDHLLNQVRLAAD 351 (356)
T ss_dssp EESCCCSSEEEEEEC-----------HHHHHHHHH-TTCBCBCSS-SS---TTEEEEECCTTCCHHHHHHHHHHHHHTC-
T ss_pred EccCCCccEEEEEcC-----------HHHHHHHHh-cCeEEeccc-cC---CCeEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 877888999999876 267887865 899999987 54 6899999863 378999999999998877
Q ss_pred Hhhh
Q 042816 158 TCKS 161 (163)
Q Consensus 158 ~~~~ 161 (163)
+..+
T Consensus 352 ~~~~ 355 (356)
T 1v72_A 352 RTQE 355 (356)
T ss_dssp ----
T ss_pred hhcc
Confidence 6543
No 144
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.28 E-value=6.3e-11 Score=89.21 Aligned_cols=141 Identities=15% Similarity=0.125 Sum_probs=95.6
Q ss_pred CCceeEEEEEecCHHHHHHHHHhhc-------------------ccCCChHHHHHHHHhcCChHHHHH--HHHHHHHHHH
Q 042816 4 LPGFRISVIYSYNNSVLAAAKKLAR-------------------FSSVSAPSQNLLVSMLSDTKFVQK--FININRERLR 62 (163)
Q Consensus 4 ~~G~RiG~~i~~~~~~~~~~~~~~~-------------------~~~~s~~~q~~~~~~l~~~~~~~~--~~~~~~~~~~ 62 (163)
.+| +|++++ ++++++.+..... ..+++...+.++...+..- .+ .+++.++.++
T Consensus 211 ~~G--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~~~~~~~~~~~~ 284 (376)
T 3f0h_A 211 PPG--ISVIVL-APRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEI---KKHGGADAEVARIA 284 (376)
T ss_dssp CSS--CEEEEE-CHHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHH---HHTTHHHHHHHHHH
T ss_pred CCc--eEEEEE-CHHHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHH---HHhcCHHHHHHHHH
Confidence 566 577889 8999888875321 1233333334444444321 22 3678889999
Q ss_pred HHHHHHHHHhhhcCCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CC
Q 042816 63 RLYVKFVAGLRQLGIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LT 141 (163)
Q Consensus 63 ~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~ 141 (163)
++++++.+.|+++|+++..+..+..++.-.+... +..++.+.|.+++||.+.||.. ...++++||++.. .+
T Consensus 285 ~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~l~~~~gi~v~~g~~--~~~~~~lRis~~~~~t 356 (376)
T 3f0h_A 285 SQAADFRAKIKDLPFELVSESPANGVTSVHPTTA------NAYDIFLKLKDEYGIWICPNGG--EMKDTIFRVGHIGALT 356 (376)
T ss_dssp HHHHHHHHHTTTSSEEECCSSBBTTEEEEEESSS------CHHHHHHHHHHHSSEECEECCG--GGTTTCEEEECCSSCC
T ss_pred HHHHHHHHHHHHcCCccCccccCceEEEEeCCCC------CHHHHHHHHHHhCCEEEecCcc--ccCCCEEEEecCCCCC
Confidence 9999999999988876665443333332223322 6788999998855999999843 2336899999963 48
Q ss_pred hhHHHHHHHHHHHHHHH
Q 042816 142 EKDIHVVMERIRRISQT 158 (163)
Q Consensus 142 ~~~l~~~~~~l~~~~~~ 158 (163)
++++++++++|.+++++
T Consensus 357 ~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 357 HEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 89999999999998764
No 145
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.27 E-value=7.8e-12 Score=96.35 Aligned_cols=144 Identities=10% Similarity=0.082 Sum_probs=95.7
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc-----ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR-----FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL- 75 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~-----~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~- 75 (163)
+|. |+|+||+++ ++++++.+..... .++.|++.+.++...|+.- ++ +...+.++++.+++.+.|++.
T Consensus 273 l~~-G~~~G~v~~-~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~---~~--~~~~~~~~~~~~~l~~~L~~~~ 345 (434)
T 2epj_A 273 IGG-GFPVGAVAG-SREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKAL---EE--EPVYSVSREAAKALEEAASEVL 345 (434)
T ss_dssp GGT-TSSCEEEEE-CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHH---HH--SCHHHHHHHHHHHHHHHHHHHH
T ss_pred hcC-Ccceeeeee-cHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHH---Hh--cCHHHHHHHHHHHHHHHHHHHH
Confidence 454 899999999 8999887765221 2467888888877776532 11 234455555666666666543
Q ss_pred ---CCccccCCceeEEEeecCCc-cc------CCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHH
Q 042816 76 ---GIECAKSNGGFYCWADMSGL-IS------SYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDI 145 (163)
Q Consensus 76 ---g~~~~~~~~g~~~~~~~~~~-~~------~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l 145 (163)
++....+..|.++|++++.. .. .....+..++++.|++ +||.+.||.. .++|+++.. +++++
T Consensus 346 ~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~------~~~~~~~~~-t~e~i 417 (434)
T 2epj_A 346 DRTGLPYTINRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLR-RGVFIAPSNL------EAVFTGLPH-QGEAL 417 (434)
T ss_dssp HHHTCCEEEEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHH-TTEECCSSTT------SCEECCTTC-SHHHH
T ss_pred hhCCCcEEEEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHHH-CCeEEeccCC------CcEEEeccC-CHHHH
Confidence 55332233456788888641 10 0011246788888886 8999999742 357877654 99999
Q ss_pred HHHHHHHHHHHHHhh
Q 042816 146 HVVMERIRRISQTCK 160 (163)
Q Consensus 146 ~~~~~~l~~~~~~~~ 160 (163)
++++++|.++++++.
T Consensus 418 ~~~l~~l~~~l~~~~ 432 (434)
T 2epj_A 418 EIAVEGLRSSLKTVL 432 (434)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988764
No 146
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.26 E-value=6.3e-12 Score=96.60 Aligned_cols=139 Identities=14% Similarity=0.122 Sum_probs=92.5
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc-----ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR-----FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL- 75 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~-----~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~- 75 (163)
|| +|+|+||+++ ++++++.+..... .++.|+++|.++...|+.- ++ .+...+.++++.+++.+.|++.
T Consensus 268 l~-~G~~~G~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~---~~-~~~~~~~~~~~~~~l~~~L~~~~ 341 (424)
T 2e7u_A 268 LG-GGLPAAAYAG-RREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELL---EE-NPGYYAYLEDLGARLEAGLKEVL 341 (424)
T ss_dssp GG-TTSSCEEEEE-CHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHH---HH-CTHHHHHHHHHHHHHHHHHHHHH
T ss_pred hh-CCcceEEEEE-cHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHH---Hh-ccHHHHHHHHHHHHHHHHHHHHH
Confidence 56 4899999999 8999888766221 2467888888887777532 11 1344555566666666666553
Q ss_pred ---CCcc-ccCCceeEEEeecCCc-cc------CCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhH
Q 042816 76 ---GIEC-AKSNGGFYCWADMSGL-IS------SYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKD 144 (163)
Q Consensus 76 ---g~~~-~~~~~g~~~~~~~~~~-~~------~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~ 144 (163)
++.. .++ .|.++|++++.. .. .....+..++++.|++ +||.+.||.. .++|+++.. ++++
T Consensus 342 ~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~------~~~~~~~~~-t~~~ 412 (424)
T 2e7u_A 342 KEKGLPHTVNR-VGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLD-RGIYWPPSNF------EAAFLSVAH-REED 412 (424)
T ss_dssp HHTTCCCEEEE-ETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHT-TTEECCSSSS------SCEECCTTC-CHHH
T ss_pred HhCCCceEEEe-eceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHH-CCeEEeccCC------CceEeeccC-CHHH
Confidence 5432 344 455789998741 00 0011245688888886 8999999742 357887654 9999
Q ss_pred HHHHHHHHHHH
Q 042816 145 IHVVMERIRRI 155 (163)
Q Consensus 145 l~~~~~~l~~~ 155 (163)
+++++++|.++
T Consensus 413 i~~~l~~l~~~ 423 (424)
T 2e7u_A 413 VEKTLEALRKA 423 (424)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 147
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.25 E-value=2.1e-11 Score=94.23 Aligned_cols=141 Identities=16% Similarity=0.172 Sum_probs=98.3
Q ss_pred CCCCc-eeEEEEEecCHHHHHHHHHhhc--ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc--C
Q 042816 2 LSLPG-FRISVIYSYNNSVLAAAKKLAR--FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL--G 76 (163)
Q Consensus 2 ~~~~G-~RiG~~i~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--g 76 (163)
+| +| +|+||+++ ++++++.+..... .++.+++++.++...|+.- ++ +...+.++++.+++.+.|++. +
T Consensus 283 l~-~G~~~~G~v~~-~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~---~~--~~~~~~~~~~~~~l~~~L~~l~~~ 355 (433)
T 1z7d_A 283 LS-GGHYPISAVLA-NDDIMLVIKPGEHGSTYGGNPLAASICVEALNVL---IN--EKLCENAEKLGGPFLENLKRELKD 355 (433)
T ss_dssp GG-TTSSCCEEEEE-CHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHH---HH--TTHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cc-CCCCCeEEEEE-CHHHHhhhccccccccCCCCHHHHHHHHHHHHHH---Hh--ccHHHHHHHHHHHHHHHHHHHHHh
Confidence 45 68 99999999 8888877755322 3567888888877777542 11 234555666666777666654 4
Q ss_pred Ccc--ccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CChhHHHHHHHHHH
Q 042816 77 IEC--AKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LTEKDIHVVMERIR 153 (163)
Q Consensus 77 ~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~~l~~~~~~l~ 153 (163)
+.. ..+..|.++|++++... .+..++++.|++ +||.+.|+ +++++|++++. ++++++++++++|.
T Consensus 356 ~~~~~~~~~~g~~~~i~~~~~~-----~~~~~~~~~l~~-~Gv~v~~~------~~~~iRi~~~~~~t~e~i~~~l~~l~ 423 (433)
T 1z7d_A 356 SKIVRDVRGKGLLCAIEFKNEL-----VNVLDICLKLKE-NGLITRDV------HDKTIRLTPPLCITKEQLDECTEIIV 423 (433)
T ss_dssp CTTEEEEEEETTEEEEEECTTT-----CCHHHHHHHHHH-TTEECCEE------TTTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred CCCeEEEEeeeeEEEEEEccCh-----hHHHHHHHHHHH-CCeEEecC------CCCEEEEECCcCCCHHHHHHHHHHHH
Confidence 322 12234567888887520 146789998887 89999985 25799998763 48999999999999
Q ss_pred HHHHHhhh
Q 042816 154 RISQTCKS 161 (163)
Q Consensus 154 ~~~~~~~~ 161 (163)
++++++..
T Consensus 424 ~~l~~~~~ 431 (433)
T 1z7d_A 424 KTVKFFDE 431 (433)
T ss_dssp HHHHHHC-
T ss_pred HHHHHHHh
Confidence 99887643
No 148
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.25 E-value=2.7e-11 Score=93.77 Aligned_cols=137 Identities=12% Similarity=0.136 Sum_probs=99.2
Q ss_pred Cc-eeEEEEEecCHHHHHHHHHhhc--ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc-
Q 042816 5 PG-FRISVIYSYNNSVLAAAKKLAR--FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIECA- 80 (163)
Q Consensus 5 ~G-~RiG~~i~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~- 80 (163)
+| +|+||+++ ++++++.+..... .++.+++.+.++...|+.- ++ +...+.++++.+++.+.|++.++.+.
T Consensus 296 ~G~~~~G~v~~-~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~---~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~ 369 (439)
T 2oat_A 296 GGLYPVSAVLC-DDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVL---EE--ENLAENADKLGIILRNELMKLPSDVVT 369 (439)
T ss_dssp TTSSCCEEEEE-CHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHH---HH--TTHHHHHHHHHHHHHHHHTTSCTTTEE
T ss_pred CCCCCeEEEEE-CHHHHhccCCCCcccCCCcCHHHHHHHHHHHHHH---hh--hhHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 47 99999999 8888877755322 3567888888887777643 22 24566777888888888887654431
Q ss_pred -cCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CChhHHHHHHHHHHHHHHH
Q 042816 81 -KSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 81 -~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~~l~~~~~~l~~~~~~ 158 (163)
.+..|.++|++++... + .+..++++.|++ +||.+.|+ +++++|++++. ++++++++++++|.+++++
T Consensus 370 ~~~~~g~~~~v~l~~~~---~-~~~~~l~~~l~~-~Gv~v~~~------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 370 AVRGKGLLNAIVIKETK---D-WDAWKVCLRLRD-NGLLAKPT------HGDIIRFAPPLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp EEEEETTEEEEEECCCS---S-CCHHHHHHHHHH-TTEECCBS------SSSEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEeeeeEEEEEEecCc---c-HHHHHHHHHHHH-CCeEEecC------CCCEEEEECccCCCHHHHHHHHHHHHHHHHh
Confidence 2234567888887520 0 146789998887 89999984 25799998753 4889999999999998764
No 149
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.21 E-value=6.9e-10 Score=84.61 Aligned_cols=148 Identities=9% Similarity=-0.019 Sum_probs=101.1
Q ss_pred CCCceeEEEEEecCHHHHHHHHHhhccc---CCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc
Q 042816 3 SLPGFRISVIYSYNNSVLAAAKKLARFS---SVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIEC 79 (163)
Q Consensus 3 ~~~G~RiG~~i~~~~~~~~~~~~~~~~~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~ 79 (163)
+++|.|+||++++++++++.+....... +++...+.++...+... .++.++..++.+.++++++.+.|++.|+++
T Consensus 228 ~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 305 (417)
T 3n0l_A 228 TLRGPRGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFN--LSDEWKVYAKQVRTNAQVLANVLMDRKFKL 305 (417)
T ss_dssp TTCSCSCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHH--TSHHHHHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred ccCCCCeeEEEECCHHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHHHHHHHHhCCcee
Confidence 4689999999993389999888776532 33444444444443321 024457788888889999999998888776
Q ss_pred cc-CCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCC----CCceEEEEEec-----CChhHHHHHH
Q 042816 80 AK-SNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCI----EPGWFSFSFTL-----LTEKDIHVVM 149 (163)
Q Consensus 80 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~----~~~~iRi~~~~-----~~~~~l~~~~ 149 (163)
.. +..+.++|++++... .+...+.+.|. ++||.+.++..+... .++.+|+++.. .+++++++++
T Consensus 306 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~-~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~ 379 (417)
T 3n0l_A 306 VSDGTDNHLVLMSFLDRE-----FSGKDADLALG-NAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVS 379 (417)
T ss_dssp GGGSCSSSEEEEECTTSS-----SCHHHHHHHHH-HTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHH
T ss_pred ccCCCCceEEEEEcccCC-----CCHHHHHHHHH-HcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHH
Confidence 64 345667888885321 15567776665 589999876543321 24679999863 3568999999
Q ss_pred HHHHHHHHH
Q 042816 150 ERIRRISQT 158 (163)
Q Consensus 150 ~~l~~~~~~ 158 (163)
+.|.+++.+
T Consensus 380 ~~l~~~l~~ 388 (417)
T 3n0l_A 380 NYIADILDD 388 (417)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 999988864
No 150
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.21 E-value=2.9e-12 Score=96.33 Aligned_cols=139 Identities=14% Similarity=0.179 Sum_probs=97.5
Q ss_pred CCCCceeEEEEEecCHHHHHH-HHHhhc---------ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHH--HHHHHHHH
Q 042816 2 LSLPGFRISVIYSYNNSVLAA-AKKLAR---------FSSVSAPSQNLLVSMLSDTKFVQKFININRERL--RRLYVKFV 69 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~-~~~~~~---------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~l~ 69 (163)
++.++ |+||+++ ++++++. +..... ..+++...+.++...++.- .. +..+.+ +++++++.
T Consensus 211 ~~~~~-~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~---~~~~~~~~~~~~~~l~ 282 (371)
T 2e7j_A 211 MAASG-PIGVMGM-KEEWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHV---RE---RIKRWDEEVEKARRFA 282 (371)
T ss_dssp SSCCS-SCEEEEE-CTTTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHH---HH---HGGGHHHHHHHHHHHH
T ss_pred CCCCC-CcEEEEE-echhhhhhccccccCcccccccccCCcCHHHHHHHHHHHHHH---HH---HHHHHHHHHHHHHHHH
Confidence 45554 9999999 7777776 654433 2234444444444444321 22 566667 78888999
Q ss_pred HHhhhcCCccccCC--ceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCC----CCCceEE-EEEec--C
Q 042816 70 AGLRQLGIECAKSN--GGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHC----IEPGWFS-FSFTL--L 140 (163)
Q Consensus 70 ~~l~~~g~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~----~~~~~iR-i~~~~--~ 140 (163)
+.|+++|+++..|. .+.++|++++ +..++.+.|.+ +||.+.| ..|.. ..++++| ++++. .
T Consensus 283 ~~L~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~-~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~ 351 (371)
T 2e7j_A 283 AEMEKLGIKQLGDNPHNHDLMFFHAE---------VLYEISKKAKG-GRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGL 351 (371)
T ss_dssp HHHHHTTCEEESSSSCCSSEEEEECH---------HHHHHHHHSSS-GGGHHHH-HHHHTTEECSCTTCCSEEEEECTTC
T ss_pred HHHHHcCcEEecCCCccCceEEEECC---------CHHHHHHHHHH-CCEEEEe-ccccccccCCCCCceEEEEeeccCC
Confidence 99988888887664 3557898886 35788888875 8999998 43422 1268999 99985 4
Q ss_pred ChhHHHHHHHHHHHHHHHh
Q 042816 141 TEKDIHVVMERIRRISQTC 159 (163)
Q Consensus 141 ~~~~l~~~~~~l~~~~~~~ 159 (163)
++++++.++++|.++++++
T Consensus 352 ~~~~i~~~~~~l~~~~~~~ 370 (371)
T 2e7j_A 352 SDEEVDYVLNAFKEIIEKY 370 (371)
T ss_dssp CHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHhc
Confidence 8999999999999988764
No 151
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.19 E-value=3.9e-11 Score=93.71 Aligned_cols=142 Identities=10% Similarity=-0.065 Sum_probs=100.9
Q ss_pred ceeEEEEEecCHHHHHHHHH-hh--------------------cccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Q 042816 6 GFRISVIYSYNNSVLAAAKK-LA--------------------RFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRL 64 (163)
Q Consensus 6 G~RiG~~i~~~~~~~~~~~~-~~--------------------~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 64 (163)
|+|+||+++ ++++++.+.. .. ...+.+.+.+.++..++.... .+.+++..+.+.++
T Consensus 276 G~~~G~~~~-~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g--~~~l~~~~~~~~~~ 352 (474)
T 1wyu_B 276 GPGSGPVGV-KAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLG--LEGLKKAAALAVLN 352 (474)
T ss_dssp CCCCCCEEE-CGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH
T ss_pred CCCeEEEEE-cHHHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH
Confidence 579999999 7777765541 00 012356677777777776422 45678889999999
Q ss_pred HHHHHHHhhhcCCccccCCceeE-EEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CCh
Q 042816 65 YVKFVAGLRQLGIECAKSNGGFY-CWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LTE 142 (163)
Q Consensus 65 ~~~l~~~l~~~g~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~ 142 (163)
++++.+.|++.|+++..+...++ +|++++... +..++++.|++ +||.+ |+..|....++++||+++. .+.
T Consensus 353 ~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~L~~-~Gi~~-~~~~~~~~~~~~lRis~~~~~t~ 424 (474)
T 1wyu_B 353 ARYLKELLKEKGYRVPYDGPSMHEFVAQPPEGF------RALDLAKGLLE-LGFHP-PTVYFPLIVKEALMVEPTETEAK 424 (474)
T ss_dssp HHHHHHHHHHTTCBCSSCSSCCSCEEEBCSTTC------CHHHHHHHHHH-TTCCC-CEESCSTTSTTCEEECCCTTSCH
T ss_pred HHHHHHHHhhcCcEecCCCCcceEEEEEcCCCC------CHHHHHHHHHH-CCccc-cccccccccCCEEEEEeecCCCH
Confidence 99999999988877643333332 566774322 67899999987 79985 6666653336899999984 367
Q ss_pred hHHHHHHHHHHHHHHH
Q 042816 143 KDIHVVMERIRRISQT 158 (163)
Q Consensus 143 ~~l~~~~~~l~~~~~~ 158 (163)
+++++++++|.+++++
T Consensus 425 e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 425 ETLEAFAEAMGALLKK 440 (474)
T ss_dssp HHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8999999999987753
No 152
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.19 E-value=1.8e-10 Score=89.25 Aligned_cols=147 Identities=12% Similarity=0.005 Sum_probs=94.6
Q ss_pred CCceeEEEEEecCHHHHHHHHHhhcc--c-CCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-----
Q 042816 4 LPGFRISVIYSYNNSVLAAAKKLARF--S-SVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL----- 75 (163)
Q Consensus 4 ~~G~RiG~~i~~~~~~~~~~~~~~~~--~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----- 75 (163)
++|+|.||+++ ++++++.+...... . +++...+.++...+.... +.+++..++.+.++++++.+.|++.
T Consensus 250 l~G~~gG~i~~-~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 326 (447)
T 3h7f_A 250 LGGGRSGLIVG-KQQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAA--TPEFADRQRRTLSGARIIADRLMAPDVAKA 326 (447)
T ss_dssp GCCCSCEEEEE-CGGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTT--SHHHHHHHHHHHHHHHHHHHHHTSHHHHHT
T ss_pred CCCCCeEEEEE-CHHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhh--CHHHHHHHHHHHHHHHHHHHHHHhccccCC
Confidence 46899999999 88888888776543 2 233333444433332210 2345778888888999999999887
Q ss_pred CCcccc-CCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEc----CCCCCCCCCCceEEEEEec-----CChhHH
Q 042816 76 GIECAK-SNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVT----PGSSCHCIEPGWFSFSFTL-----LTEKDI 145 (163)
Q Consensus 76 g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~----pg~~f~~~~~~~iRi~~~~-----~~~~~l 145 (163)
|+++.. +.+++++|+++.... .+...+.+ +++++||.+. |+..+....++++||+... .+++++
T Consensus 327 g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei 400 (447)
T 3h7f_A 327 GVSVVSGGTDVHLVLVDLRDSP-----LDGQAAED-LLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEF 400 (447)
T ss_dssp TCEEGGGSCSSSEEEEECTTSS-----CCHHHHHH-HHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHH
T ss_pred CeEEecCCCCCCEEEEEcCCCC-----CCHHHHHH-HHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHH
Confidence 887764 456778888885421 13444444 5565899999 6643333336789998753 367899
Q ss_pred HHHHHHHHHHHHHh
Q 042816 146 HVVMERIRRISQTC 159 (163)
Q Consensus 146 ~~~~~~l~~~~~~~ 159 (163)
+++++.|.+++.+.
T Consensus 401 ~~~~~~l~~~l~~~ 414 (447)
T 3h7f_A 401 TEVADIIATALATG 414 (447)
T ss_dssp HHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999887643
No 153
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.19 E-value=6.8e-11 Score=91.60 Aligned_cols=142 Identities=7% Similarity=-0.041 Sum_probs=89.3
Q ss_pred CCCCceeEEEEEecCHHHHHHHHH---h----hcccCCChHHHHHHHHhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKK---L----ARFSSVSAPSQNLLVSMLSD-TKFVQKFININRERLRRLYVKFVAGLR 73 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~---~----~~~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~ 73 (163)
|+ +|+|+||+++ ++++++.+.. . ...++.|+++|.++...|+. . .+...+.++++.+++.+.|+
T Consensus 271 l~-~G~~~G~v~~-~~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~------~~~~~~~~~~~~~~l~~~L~ 342 (453)
T 2cy8_A 271 SA-GGLPGGILGG-REDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL------EDDVCAKINDLGQFAREAMN 342 (453)
T ss_dssp GG-TTSSCEEEEE-CHHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH------HTTHHHHHHHHHHHHHHHHH
T ss_pred hh-CCcceEEEec-hHHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh------hhhHHHHHHHHHHHHHHHHH
Confidence 45 3899999999 8998887755 1 11356788888877766654 1 01223334444444444444
Q ss_pred h----cCCccccCCceeEEEeecCC-----c-----cc---CCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEE
Q 042816 74 Q----LGIECAKSNGGFYCWADMSG-----L-----IS---SYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFS 136 (163)
Q Consensus 74 ~----~g~~~~~~~~g~~~~~~~~~-----~-----~~---~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~ 136 (163)
+ +++....+..|.++|++++. . .. .....+..++++.|++ +||.+.|+ +.+|++
T Consensus 343 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~Gv~v~~~--------~~~~l~ 413 (453)
T 2cy8_A 343 HLFARKGLNWLAYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALIL-EGVDIGGR--------GSVFLS 413 (453)
T ss_dssp HHHHHTTCCEEEECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHH-TTEECBTT--------TEEECC
T ss_pred HHHhhCCCcEEEEEeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHHH-CCeEEeCC--------CCEEee
Confidence 3 34433223445678988874 1 00 0011246788888886 89999653 237887
Q ss_pred EecCChhHHHHHHHHHHHHHHHhhh
Q 042816 137 FTLLTEKDIHVVMERIRRISQTCKS 161 (163)
Q Consensus 137 ~~~~~~~~l~~~~~~l~~~~~~~~~ 161 (163)
+.. +++++++++++|.+++.++++
T Consensus 414 ~~~-t~~~i~~~l~~l~~~l~~~~~ 437 (453)
T 2cy8_A 414 AQH-EREHVEHLVTTFDRVLDRLAD 437 (453)
T ss_dssp TTC-CHHHHHHHHHHHHHHHHHHHH
T ss_pred ccC-CHHHHHHHHHHHHHHHHHHHh
Confidence 554 999999999999999887654
No 154
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.17 E-value=7.8e-11 Score=91.13 Aligned_cols=140 Identities=13% Similarity=0.073 Sum_probs=96.0
Q ss_pred Cc-eeEEEEEecCHHHHHHHHHhh---------c--ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHh
Q 042816 5 PG-FRISVIYSYNNSVLAAAKKLA---------R--FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGL 72 (163)
Q Consensus 5 ~G-~RiG~~i~~~~~~~~~~~~~~---------~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l 72 (163)
+| +|+||+++ ++++++.+.... . .++.++++|.++..+|+.- ++ +...+.++++.+++.+.|
T Consensus 292 ~G~~~~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~---~~--~~~~~~~~~~~~~l~~~L 365 (449)
T 3a8u_X 292 NGAIPMGAVIA-STEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLL---QK--ENLVQSVAEVAPHFEKAL 365 (449)
T ss_dssp TTSSCCEEEEE-EHHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHH---HH--TTHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEE-CHHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHH---Hh--cCHHHHHHHHHHHHHHHH
Confidence 36 99999999 889999887641 1 2467888888887777642 11 234556666777777777
Q ss_pred hhc-CCccc--cCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEe-cCChhHHHHH
Q 042816 73 RQL-GIECA--KSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFT-LLTEKDIHVV 148 (163)
Q Consensus 73 ~~~-g~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~-~~~~~~l~~~ 148 (163)
+++ ++... .+..|.++|++++....... .+..++.+.|++ +||.+.|+ + +++||++. ..++++++++
T Consensus 366 ~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~-~~~~~~~~~l~~-~Gv~v~~~------g-~~iRis~~~~~t~~~i~~~ 436 (449)
T 3a8u_X 366 HGIKGAKNVIDIRNFGLAGAIQIAPRDGDAI-VRPFEAGMALWK-AGFYVRFG------G-DTLQFGPTFNSKPQDLDRL 436 (449)
T ss_dssp HTTTTSTTEEEEEEETTEEEEEECCBTTBSS-HHHHHHHHHHHH-HTEECEEE------T-TEEEECCCTTCCHHHHHHH
T ss_pred HHHhcCCCeEEEeeeEEEEEEEEecCccccc-ccHHHHHHHHHH-CCcEEecC------C-CEEEEECCCcCCHHHHHHH
Confidence 664 23221 13356789999875310000 023468888886 79999986 1 78999964 3489999999
Q ss_pred HHHHHHHHHHh
Q 042816 149 MERIRRISQTC 159 (163)
Q Consensus 149 ~~~l~~~~~~~ 159 (163)
+++|.++++++
T Consensus 437 l~~l~~~l~~~ 447 (449)
T 3a8u_X 437 FDAVGEVLNKL 447 (449)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHHH
Confidence 99999988764
No 155
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.17 E-value=1.1e-10 Score=88.79 Aligned_cols=137 Identities=9% Similarity=0.054 Sum_probs=95.9
Q ss_pred eEE-EEEecCHHHHHHHHHhhc-----------ccCCChHHHHHHHHhcCChH------------HHHHHHHHHHHHHHH
Q 042816 8 RIS-VIYSYNNSVLAAAKKLAR-----------FSSVSAPSQNLLVSMLSDTK------------FVQKFININRERLRR 63 (163)
Q Consensus 8 RiG-~~i~~~~~~~~~~~~~~~-----------~~~~s~~~q~~~~~~l~~~~------------~~~~~~~~~~~~~~~ 63 (163)
++| |+++ ++++++.+..... ..+++.+.+.++..+++.-. .+++++++.++.+++
T Consensus 232 ~~G~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 310 (406)
T 3cai_A 232 PIGAMVFR-DPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNR 310 (406)
T ss_dssp SCEEEEES-CHHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHH
T ss_pred CcCeEEEE-ehHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHH
Confidence 399 9999 8888877654431 13345555544444442210 012367889999999
Q ss_pred HHHHHHHHhhhc-CCccccCC---ceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCC------CCCCC-CCce
Q 042816 64 LYVKFVAGLRQL-GIECAKSN---GGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGS------SCHCI-EPGW 132 (163)
Q Consensus 64 ~~~~l~~~l~~~-g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~------~f~~~-~~~~ 132 (163)
+++++.+.|+++ |+++..|. ++ ++++.++.. +..++.+.|.+ +||.+.+|+ .|+.. .+++
T Consensus 311 ~~~~l~~~L~~~~~~~~~~~~~~~~~-~~~~~~~~~-------~~~~~~~~L~~-~gi~v~~g~~~~~~~~~g~~~~~~~ 381 (406)
T 3cai_A 311 VFDYLMVSLRSLPLVMLIGRPEAQIP-VVSFAVHKV-------PADRVVQRLAD-NGILAIANTGSRVLDVLGVNDVGGA 381 (406)
T ss_dssp HHHHHHHHHHTCTTEEECCCCSSBCS-EEEEEETTB-------CHHHHHHHHHH-TTEECEECCSCHHHHHHTTTTTTCC
T ss_pred HHHHHHHHHhcCCCeEEcCCccccCC-EEEEEECCc-------CHHHHHHHHHH-CCcEEecCChHHHHHHcCCCCCCCe
Confidence 999999999987 77776653 55 678887642 56788888876 899999987 33322 2589
Q ss_pred EEEEEec-CChhHHHHHHHHHHH
Q 042816 133 FSFSFTL-LTEKDIHVVMERIRR 154 (163)
Q Consensus 133 iRi~~~~-~~~~~l~~~~~~l~~ 154 (163)
+||+++. .++++++.+++.|++
T Consensus 382 iRis~~~~~t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 382 VTVGLAHYSTMAEVDQLVRALAS 404 (406)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHT
T ss_pred EEEEeecCCCHHHHHHHHHHHHH
Confidence 9999985 367889988888764
No 156
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.16 E-value=3.2e-10 Score=87.75 Aligned_cols=151 Identities=13% Similarity=0.096 Sum_probs=92.8
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhcc-------cCCChHH-HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLARF-------SSVSAPS-QNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLR 73 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~~-------~~~s~~~-q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 73 (163)
++++| |+||+++.++++++.+...... .+.+... |.++...++ .++ +...+...++.+++.+.|+
T Consensus 258 ~~~~~-~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~---~~~---~~~~~~~~~~~~~l~~~L~ 330 (456)
T 2ez2_A 258 DCLVN-IGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLRE---AMQ---YEYIEHRVKQVRYLGDKLK 330 (456)
T ss_dssp TTCCS-SCEEEEESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHH---HTC---HHHHHHHHHHHHHHHHHHH
T ss_pred cCCCC-ceeEEEECCHHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHH---HhH---HHHHHHHHHHHHHHHHHHh
Confidence 45567 8999998568888887665432 1223322 221222221 111 1223333445567777777
Q ss_pred hcCCccccCCceeEEEeecCC---cccCCChhhHHHHHHHHHHhcCeEEcC-CCCCC----------CCCCceEEEEEec
Q 042816 74 QLGIECAKSNGGFYCWADMSG---LISSYSEKGELELWDKLLNVAKVNVTP-GSSCH----------CIEPGWFSFSFTL 139 (163)
Q Consensus 74 ~~g~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~gi~v~p-g~~f~----------~~~~~~iRi~~~~ 139 (163)
+.|+++..|.+++++|++++. ....... ....+++.|++++||.+.| |..|. ..+.+++||+++.
T Consensus 331 ~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~ 409 (456)
T 2ez2_A 331 AAGVPIVEPVGGHAVFLDARRFCEHLTQDEF-PAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPR 409 (456)
T ss_dssp HTTCCBCSSCCSSEEEEEHHHHTTTSCGGGC-HHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCT
T ss_pred cCCCccccCCCceEEEEEhHHhcCCCChhhc-cHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCC
Confidence 778888888999999998742 1100000 1334477775568999766 54331 1124799999984
Q ss_pred --CChhHHHHHHHHHHHHHHHhh
Q 042816 140 --LTEKDIHVVMERIRRISQTCK 160 (163)
Q Consensus 140 --~~~~~l~~~~~~l~~~~~~~~ 160 (163)
.+++++++++++|.+++++..
T Consensus 410 ~~~t~e~i~~~~~~l~~~l~~~~ 432 (456)
T 2ez2_A 410 RVYTYAHMDVVADGIIKLYQHKE 432 (456)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTGG
T ss_pred CCCCHHHHHHHHHHHHHHHhhhh
Confidence 389999999999999987654
No 157
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.15 E-value=3.9e-10 Score=85.98 Aligned_cols=142 Identities=9% Similarity=0.022 Sum_probs=95.4
Q ss_pred CceeEEEEEecCH---HHHHHHHHhhcc--c-CCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 042816 5 PGFRISVIYSYNN---SVLAAAKKLARF--S-SVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIE 78 (163)
Q Consensus 5 ~G~RiG~~i~~~~---~~~~~~~~~~~~--~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 78 (163)
+|.|.||+++ ++ ++.+.+...... . +++...+.++...+... .++++++.++.+.++++++.+.|++.|++
T Consensus 235 ~g~~gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 311 (420)
T 3gbx_A 235 AGPRGGLILA-KGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEA--MEPEFKVYQQQVAKNAKAMVEVFLNRGYK 311 (420)
T ss_dssp CSCSCEEEEE-SSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHT--TSHHHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred CCCCceEEEE-cCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHH--HhHhHHHHHHHHHHHHHHHHHHHHhcCCe
Confidence 3677799999 65 788877765443 2 33344444433333211 02456788889999999999999988888
Q ss_pred cccC-CceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcC-------CCCCCCCCCceEEEEEec-----CChhHH
Q 042816 79 CAKS-NGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTP-------GSSCHCIEPGWFSFSFTL-----LTEKDI 145 (163)
Q Consensus 79 ~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~p-------g~~f~~~~~~~iRi~~~~-----~~~~~l 145 (163)
+..+ ..+.++|++++... .+...+.+.|. ++||.+.| |..|+ ++.+||++.. .+++++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~-~~gi~v~~~~~~~~~~~~~~---~~~iRi~~~~~~~~~~~~~~i 382 (420)
T 3gbx_A 312 VVSGGTENHLFLLDLVDKN-----LTGKEADAALG-RANITVNKNSVPNDPKSPFV---TSGIRIGSPAVTRRGFKEAEV 382 (420)
T ss_dssp EGGGSCSSSEEEEECGGGT-----CCHHHHHHHHH-HTTEECEEECCTTCSSCTTT---CSEEEEECHHHHHTTCCHHHH
T ss_pred eccCCCCCeEEEEEcCCCC-----CCHHHHHHHHH-HCCcEeccccCCCCccccCC---CcceEEecchhcccCCCHHHH
Confidence 7654 56778888886421 14566666664 58999998 44443 4569999864 246888
Q ss_pred HHHHHHHHHHHHH
Q 042816 146 HVVMERIRRISQT 158 (163)
Q Consensus 146 ~~~~~~l~~~~~~ 158 (163)
+.+++.|.+++++
T Consensus 383 ~~~~~~l~~~l~~ 395 (420)
T 3gbx_A 383 KELAGWMCDVLDN 395 (420)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhC
Confidence 9998888887754
No 158
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.14 E-value=1.1e-10 Score=89.36 Aligned_cols=145 Identities=15% Similarity=0.162 Sum_probs=100.9
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc---------ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHh
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR---------FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGL 72 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~---------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l 72 (163)
+|.+| +||+++ ++++.+.+..... ..+++...+.++..++..- .+++++.++.++++++++.+.|
T Consensus 227 ~g~~g--~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~~~~~~~~~~~~~~~l~~~L 300 (423)
T 3lvm_A 227 YGPKG--IGALYV-RRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIA---KEEMATEMERLRGLRNRLWNGI 300 (423)
T ss_dssp TSCSS--CEEEEE-CBTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCC--eEEEEE-eccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH
Confidence 56666 999999 7666555544321 2345666666666666532 4557899999999999999999
Q ss_pred hhc-CCccccCCc---eeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCC-----------------Cc
Q 042816 73 RQL-GIECAKSNG---GFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIE-----------------PG 131 (163)
Q Consensus 73 ~~~-g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~-----------------~~ 131 (163)
+++ |+++..+.+ +.++++.++.. +..++.+.|.+ |.+.+|..|.... ++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~l~~---i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~ 370 (423)
T 3lvm_A 301 KDIEEVYLNGDLEHGAPNILNVSFNYV-------EGESLIMALKD---LAVSSGSACTSASLEPSYVLRALGLNDELAHS 370 (423)
T ss_dssp TTSTTEEEESCSTTBCTTEEEEEETTS-------CHHHHHHHTTT---EECBCCCC-----CCCCHHHHHHTCCHHHHHT
T ss_pred hcCCCEEEeCCccccCCCeEEEEeCCC-------CHHHHHHHHhh---heeccCccccCCCccccHHHHHhCCCccccCc
Confidence 988 888776654 23344444431 56778876643 9999998765311 48
Q ss_pred eEEEEEec-CChhHHHHHHHHHHHHHHHhhhc
Q 042816 132 WFSFSFTL-LTEKDIHVVMERIRRISQTCKSH 162 (163)
Q Consensus 132 ~iRi~~~~-~~~~~l~~~~~~l~~~~~~~~~~ 162 (163)
++||+++. .++++++.+++.|.++++++++.
T Consensus 371 ~iRi~~~~~~t~e~i~~~~~~l~~~~~~~~~~ 402 (423)
T 3lvm_A 371 SIRFSLGRFTTEEEIDYTIELVRKSIGRLRDL 402 (423)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred eEEEECCCCCCHHHHHHHHHHHHHHHHHhhcc
Confidence 99999984 37789999999999999887653
No 159
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.12 E-value=1.2e-09 Score=82.66 Aligned_cols=147 Identities=10% Similarity=0.073 Sum_probs=94.6
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhcc-c-------------------------CCChHHHHHHHHhcCChHHHHHHHH
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLARF-S-------------------------SVSAPSQNLLVSMLSDTKFVQKFIN 55 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~~-~-------------------------~~s~~~q~~~~~~l~~~~~~~~~~~ 55 (163)
.+++|.|+||++++++++++.+...... . ..+.+...++...++ .++
T Consensus 188 K~l~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~-------~~~ 260 (393)
T 1mdo_A 188 KNITCAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQ-------KLD 260 (393)
T ss_dssp SSSCSSSCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHH-------THH
T ss_pred CccccccceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHH-------HHH
Confidence 5677789999999448998888765432 1 123333322222222 133
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCcccc-C-----CceeEEEeecCC---cccCCChhhHHHHHHHHHHhcCeEEcCCCCCC
Q 042816 56 INRERLRRLYVKFVAGLRQLGIECAK-S-----NGGFYCWADMSG---LISSYSEKGELELWDKLLNVAKVNVTPGSSCH 126 (163)
Q Consensus 56 ~~~~~~~~~~~~l~~~l~~~g~~~~~-~-----~~g~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~ 126 (163)
+..+..+++.+++.+.|++.++++.. + .+++++|+.++. .. +..++.+.|.+ +||.+.+|..+.
T Consensus 261 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------~~~~l~~~l~~-~gi~v~~~~~~~ 333 (393)
T 1mdo_A 261 ALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRVDEARCGI------TRDALMASLKT-KGIGTGLHFRAA 333 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEECCHHHHSS------CHHHHHHHHHH-TTBCCBCCCCCG
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccccCCCCCCCceeEEEEEEeccccccc------CHHHHHHHHHh-CCCCcccccCcc
Confidence 44444556777888888887755432 2 456778999873 22 56889988876 899999987441
Q ss_pred --------------CC-----CCceEEEEEec-CChhHHHHHHHHHHHHHHHhhhc
Q 042816 127 --------------CI-----EPGWFSFSFTL-LTEKDIHVVMERIRRISQTCKSH 162 (163)
Q Consensus 127 --------------~~-----~~~~iRi~~~~-~~~~~l~~~~~~l~~~~~~~~~~ 162 (163)
.+ ..+.+|+++.. .++++++.+++.|.++++.+.||
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~~~~ 389 (393)
T 1mdo_A 334 HTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIAGQGSHH 389 (393)
T ss_dssp GGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHHC-----
T ss_pred ccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHhcCCcc
Confidence 00 13489999973 48899999999999999877654
No 160
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.11 E-value=2.6e-10 Score=88.76 Aligned_cols=134 Identities=11% Similarity=0.024 Sum_probs=91.2
Q ss_pred eeEEEEEecCHHHHHHHHHh--h-----cccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc----
Q 042816 7 FRISVIYSYNNSVLAAAKKL--A-----RFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL---- 75 (163)
Q Consensus 7 ~RiG~~i~~~~~~~~~~~~~--~-----~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---- 75 (163)
+|+||+++ ++++++.+... . ..++.++++|.++...|+.-. + +...+.++++.+++.+.|+++
T Consensus 310 ~~lG~v~~-~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~---~--~~~~~~~~~~~~~l~~~L~~l~~~~ 383 (457)
T 3tfu_A 310 LSLAATLC-TADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLL---G--QDWRTRITELAAGLTAGLDTARALP 383 (457)
T ss_dssp SCCEEEEE-EHHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHH---T--SCHHHHHHHHHHHHHHHHGGGGGST
T ss_pred cceEEEEE-cHHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHh---h--hHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 79999999 89999998632 1 125778898888877775211 0 123334444455555555443
Q ss_pred CCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CChhHHHHHHHHHHH
Q 042816 76 GIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LTEKDIHVVMERIRR 154 (163)
Q Consensus 76 g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~~l~~~~~~l~~ 154 (163)
++...++. |.+++++++... +..++++.|++ +||.+.|+ .+++||+... ++++++++++++|.+
T Consensus 384 ~v~~vr~~-G~~~~i~l~~~~------~~~~~~~~l~~-~Gv~v~~~-------~~~lRi~p~~~~t~eei~~~l~~L~~ 448 (457)
T 3tfu_A 384 AVTDVRVC-GAIGVIECDRPV------DLAVATPAALD-RGVWLRPF-------RNLVYAMPPYICTPAEITQITSAMVE 448 (457)
T ss_dssp TEEEEEEC-SSCEEEEESSCC------CHHHHHHHHHH-TTEECCCB-------TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred CeeeeecC-CeEEEEEECCcc------cHHHHHHHHHH-CCeEEEec-------CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 34344444 456777887532 56889998887 79999873 2689998653 388999999999999
Q ss_pred HHHHhhh
Q 042816 155 ISQTCKS 161 (163)
Q Consensus 155 ~~~~~~~ 161 (163)
+++++..
T Consensus 449 ~l~~~~~ 455 (457)
T 3tfu_A 449 VARLVGS 455 (457)
T ss_dssp HHHHC--
T ss_pred HHHHhcc
Confidence 9987654
No 161
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.10 E-value=2.8e-10 Score=88.86 Aligned_cols=142 Identities=13% Similarity=-0.035 Sum_probs=90.0
Q ss_pred CCCceeEEEEEecCHHHHHHHHHh--hc--ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHH-HHHHHHHHHhhh---
Q 042816 3 SLPGFRISVIYSYNNSVLAAAKKL--AR--FSSVSAPSQNLLVSMLSDTKFVQKFININRERLR-RLYVKFVAGLRQ--- 74 (163)
Q Consensus 3 ~~~G~RiG~~i~~~~~~~~~~~~~--~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~--- 74 (163)
+..|+|+||+++ ++++++.+... .. .++.++++|.++...|+.-+ + +...+.++ ++.+++.+.|++
T Consensus 295 ~gg~~plG~v~~-~~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~---~--~~~~~~~~~~~~~~l~~~L~~l~~ 368 (472)
T 3hmu_A 295 SSGYAPIGGSIV-CDEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILE---E--ENILDHVRNVAAPYLKEKWEALTD 368 (472)
T ss_dssp TTTSSCCEEEEE-EHHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHH---H--TTHHHHHHHTHHHHHHHHHHGGGG
T ss_pred hcCCcceEEEEE-CHHHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHH---H--hHHHHHHHHHHHHHHHHHHHHHhc
Confidence 334499999999 99999998321 11 25688999998888886321 1 12333333 444444444443
Q ss_pred c-CCccccCCceeEEEeecCCcc-cCCC-----hhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CChhHHH
Q 042816 75 L-GIECAKSNGGFYCWADMSGLI-SSYS-----EKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LTEKDIH 146 (163)
Q Consensus 75 ~-g~~~~~~~~g~~~~~~~~~~~-~~~~-----~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~~l~ 146 (163)
+ ++...++.|. ++++++.... .... ......+++.|++ +||.+.|+. +++||+... +++++++
T Consensus 369 ~~~v~~vr~~G~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~g-------~~iRi~p~~~~t~e~i~ 439 (472)
T 3hmu_A 369 HPLVGEAKIVGM-MASIALTPNKASRAKFASEPGTIGYICRERCFA-NNLIMRHVG-------DRMIISPPLVITPAEID 439 (472)
T ss_dssp STTEEEEEEETT-EEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHH-TTBCCEEET-------TEEEECCCTTCCHHHHH
T ss_pred CCCeEEEEecCc-eEEEEEecCccccccccchhHHHHHHHHHHHHH-CCcEEEecC-------CEEEEECCCCCCHHHHH
Confidence 3 3444555665 4555654311 0000 0125678888886 899999851 799999432 3889999
Q ss_pred HHHHHHHHHHHHh
Q 042816 147 VVMERIRRISQTC 159 (163)
Q Consensus 147 ~~~~~l~~~~~~~ 159 (163)
+++++|.+++++.
T Consensus 440 ~~l~~l~~~l~~~ 452 (472)
T 3hmu_A 440 EMFVRIRKSLDEA 452 (472)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988764
No 162
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.10 E-value=7.1e-10 Score=82.63 Aligned_cols=130 Identities=10% Similarity=0.092 Sum_probs=86.6
Q ss_pred EE-EEEecCHHHHHHHHHhhccc----CCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc-cC
Q 042816 9 IS-VIYSYNNSVLAAAKKLARFS----SVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIECA-KS 82 (163)
Q Consensus 9 iG-~~i~~~~~~~~~~~~~~~~~----~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~-~~ 82 (163)
+| |+++ ++++++.+...+..+ ..+.+.+.++...++.. .+.+++.+ ++++.+.+.|+++|+++. .+
T Consensus 209 ~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~-~~~~~l~~~L~~~~~~~~~~~ 280 (347)
T 1jg8_A 209 VGSVVVG-DRDFIERARKARKMLGGGMRQAGVLAAAGIIALTKM------VDRLKEDH-ENARFLALKLKEIGYSVNPED 280 (347)
T ss_dssp SCEEEEE-CHHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHS------STTHHHHH-HHHHHHHHHHHHHTCBCCGGG
T ss_pred ceEEEEc-CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHH------HHHHHHHH-HHHHHHHHHHHhcCceeccCC
Confidence 67 4666 899988887665532 23445555444444321 11222222 456778888877776642 34
Q ss_pred CceeEEEeecCC-cccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEe-cCChhHHHHHHHHHHHHHHHh
Q 042816 83 NGGFYCWADMSG-LISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFT-LLTEKDIHVVMERIRRISQTC 159 (163)
Q Consensus 83 ~~g~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~-~~~~~~l~~~~~~l~~~~~~~ 159 (163)
..+.++|++++. .. +..++.+.|.+ +||.+.|+. ++++|+++. ..+++++++++++|.++++++
T Consensus 281 ~~~~~~~~~~~~~~~------~~~~~~~~l~~-~gi~v~~~~------~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~~ 346 (347)
T 1jg8_A 281 VKTNMVILRTDNLKV------NAHGFIEALRN-SGVLANAVS------DTEIRLVTHKDVSRNDIEEALNIFEKLFRKF 346 (347)
T ss_dssp CCSSEEEEECTTSSS------CHHHHHHHHHH-HTEECEEEE------TTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEcccccC------CHHHHHHHHHH-CCCEEecCC------CCeEEEEeCCCCCHHHHHHHHHHHHHHHHhc
Confidence 455579999874 22 57889998876 899998752 478999984 358899999999999988654
No 163
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.08 E-value=1.2e-09 Score=85.50 Aligned_cols=146 Identities=14% Similarity=0.134 Sum_probs=97.1
Q ss_pred CCceeEEEEEecCH--------------HHHHHHHHhhcc--c-CCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Q 042816 4 LPGFRISVIYSYNN--------------SVLAAAKKLARF--S-SVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYV 66 (163)
Q Consensus 4 ~~G~RiG~~i~~~~--------------~~~~~~~~~~~~--~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 66 (163)
++|.|.||++++++ ++.+.+...... . +++...+.++..++.... ...++...+.+.++++
T Consensus 258 l~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~--~~~~~~~~~~~~~~~~ 335 (483)
T 1rv3_A 258 LRGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAM--TPEFKEYQRQVVANCR 335 (483)
T ss_dssp GCCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHH
T ss_pred CCCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHh--ChhHHHHHHHHHHHHH
Confidence 57899999999432 244444433221 2 233443444444443211 1234677888899999
Q ss_pred HHHHHhhhcCCccccCC-ceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEc----CCCCCCCCCCceEEEEEecC-
Q 042816 67 KFVAGLRQLGIECAKSN-GGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVT----PGSSCHCIEPGWFSFSFTLL- 140 (163)
Q Consensus 67 ~l~~~l~~~g~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~----pg~~f~~~~~~~iRi~~~~~- 140 (163)
++.+.|++.|+++..+. +++++|++++... .+..++.+.| ++.||.+. ||.... -+++++||++...
T Consensus 336 ~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~g-----~~~~~~~~~L-~~~gI~v~~~~~pg~~~~-~~~~~iRis~~~~~ 408 (483)
T 1rv3_A 336 ALSAALVELGYKIVTGGSDNHLILVDLRSKG-----TDGGRAEKVL-EACSIACNKNTCPGDKSA-LRPSGLRLGTPALT 408 (483)
T ss_dssp HHHHHHHHTTCEEGGGSCSSSEEEEEGGGGT-----CCHHHHHHHH-HHTTEECEEECCSSCSCT-TSCCEEEEECHHHH
T ss_pred HHHHHHHhcCCEeccCCCCCceEEEeccCCC-----CCHHHHHHHH-HhCCcEEecCCCCCCCcC-CCCceEEeecCCcc
Confidence 99999998898887653 4578899986421 1566777666 45999999 887321 2368999999742
Q ss_pred C----hhHHHHHHHHHHHHHHH
Q 042816 141 T----EKDIHVVMERIRRISQT 158 (163)
Q Consensus 141 ~----~~~l~~~~~~l~~~~~~ 158 (163)
+ +++++++++.|.+++..
T Consensus 409 t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 409 SRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHh
Confidence 3 78999999999988865
No 164
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.08 E-value=1.2e-09 Score=84.68 Aligned_cols=145 Identities=12% Similarity=0.150 Sum_probs=89.2
Q ss_pred EEEEecCH-HHHHHHHHhhcc------c-CCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcccc
Q 042816 10 SVIYSYNN-SVLAAAKKLARF------S-SVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIECAK 81 (163)
Q Consensus 10 G~~i~~~~-~~~~~~~~~~~~------~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~ 81 (163)
||++++++ ++++.+...... . ..+...+.++...++.... ++.+++ ..++.+++.+.|++.|+.+..
T Consensus 274 g~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~----~~~~~~~l~~~L~~~~~~~~~ 348 (467)
T 1ax4_A 274 GLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE-EEYLHY----RIGQVKYLGDRLREAGIPIQY 348 (467)
T ss_dssp EEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC-HHHHHH----HHHHHHHHHHHHHHTTCCBCS
T ss_pred eEEEeCCHHHHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhh-hhHHHH----HHHHHHHHHHHHHhCCCCccc
Confidence 67777336 888877655321 1 2233333322222321100 112222 235667788888777888888
Q ss_pred CCceeEEEeecCCcc---cCCChhhHHHHHHHHHHhcCeEEcC-CCCC-CC----C-----CCceEEEEEec--CChhHH
Q 042816 82 SNGGFYCWADMSGLI---SSYSEKGELELWDKLLNVAKVNVTP-GSSC-HC----I-----EPGWFSFSFTL--LTEKDI 145 (163)
Q Consensus 82 ~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~gi~v~p-g~~f-~~----~-----~~~~iRi~~~~--~~~~~l 145 (163)
|.+|+++|+++.... ...+ .+..++++.|++++||.+.| |+.| +. . ..+++||++.. .+.+++
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i 427 (467)
T 1ax4_A 349 PTGGHAVFVDCKKLVPQIPGDQ-FPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHM 427 (467)
T ss_dssp SCCSSEEEEESTTTCTTSCGGG-CHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHH
T ss_pred CCCceEEEEehhhhccccccCC-CCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHH
Confidence 899999999932211 0001 15678999885558999999 6542 11 0 13799999982 478999
Q ss_pred HHHHHHHHHHHHHhh
Q 042816 146 HVVMERIRRISQTCK 160 (163)
Q Consensus 146 ~~~~~~l~~~~~~~~ 160 (163)
++++++|.+++++.+
T Consensus 428 ~~~~~~l~~~~~~~~ 442 (467)
T 1ax4_A 428 DYIADALIGLKEKFA 442 (467)
T ss_dssp HHHHHHHHTTHHHHT
T ss_pred HHHHHHHHHHHHhhh
Confidence 999999999887653
No 165
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.06 E-value=1.4e-09 Score=81.11 Aligned_cols=133 Identities=14% Similarity=0.103 Sum_probs=90.5
Q ss_pred eeEEEEEecCHHHHHHHHHhhc---c-cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccC
Q 042816 7 FRISVIYSYNNSVLAAAKKLAR---F-SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIECAKS 82 (163)
Q Consensus 7 ~RiG~~i~~~~~~~~~~~~~~~---~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ 82 (163)
..+|++++ ++++++.+..... . .+.+......+..++++.. .++.++.++++++++.+.|+..|+++..|
T Consensus 221 ~~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 294 (359)
T 1svv_A 221 FGEALIIL-NDALKPNARHLIKQRGALMAKGWLLGIQFEVLMKDNL-----FFELGAHSNKMAAILKAGLEACGIRLAWP 294 (359)
T ss_dssp SCEEEEEC-SGGGCTTHHHHHHHTTCCCTTTHHHHHHHHHHTSTTH-----HHHHHHHHHHHHHHHHHHHHHTTCCBSSC
T ss_pred CceEEEEE-cccHHHHHHHHHhcCCcccccchhhHHHHHHHHhhhh-----HHHHHHHHHHHHHHHHHHhccCCeEEccC
Confidence 45789988 8888777765421 1 1223233333445666532 36778888999999999994348988888
Q ss_pred CceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CChhHHHHHHHHHHHHHHHh
Q 042816 83 NGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LTEKDIHVVMERIRRISQTC 159 (163)
Q Consensus 83 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~~l~~~~~~l~~~~~~~ 159 (163)
.+++++|++++ .++++.|++++||.+.+.. ...++++||+++. .+++++++++++|.+++++.
T Consensus 295 ~~~~~~~~~~~-----------~~~~~~l~~~~gi~v~~~~---~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 358 (359)
T 1svv_A 295 SASNQLFPILE-----------NTMIAELNNDFDMYTVEPL---KDGTCIMRLCTSWATEEKECHRFVEVLKRLVAST 358 (359)
T ss_dssp CSSSEECBEEE-----------HHHHHHHTTTEECEEEEEE---TTTEEEEEEECCTTCCHHHHHHHHHHHHHC----
T ss_pred CccceEEEEcC-----------HHHHHHHHHhcCEEEEecc---cCCCceEEEEccCcCCHHHHHHHHHHHHHHHhcc
Confidence 89999998765 3678888874499992210 1236799998763 48899999999999887653
No 166
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.05 E-value=2.3e-09 Score=81.71 Aligned_cols=145 Identities=14% Similarity=0.146 Sum_probs=96.8
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhcc--------------cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLARF--------------SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVK 67 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~~--------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 67 (163)
||.+| |+||++++++++++.+...... +.++.+.+.++...++.- +...+..++..++
T Consensus 215 ~~~~G-~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~-------~~~~~~~~~~~~~ 286 (399)
T 2oga_A 215 LGCFG-DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAHL-------DSWNGRRSALAAE 286 (399)
T ss_dssp SCCSS-CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHTH-------HHHHHHHHHHHHH
T ss_pred CCcCC-ceEEEEeCCHHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHHH-------HHHHHHHHHHHHH
Confidence 67779 9999999448998888765432 234556666555555432 2334445566778
Q ss_pred HHHHhhhc-CCccc-cCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCC-----------C------
Q 042816 68 FVAGLRQL-GIECA-KSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHC-----------I------ 128 (163)
Q Consensus 68 l~~~l~~~-g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~-----------~------ 128 (163)
+.+.|+++ |+++. .|+++.++|+.++... .+..++.+.|.+ +||.+.++..... .
T Consensus 287 l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~-~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~ 360 (399)
T 2oga_A 287 YLSGLAGLPGIGLPVTAPDTDPVWHLFTVRT-----ERRDELRSHLDA-RGIDTLTHYPVPVHLSPAYAGEAPPEGSLPR 360 (399)
T ss_dssp HHHHTTTCTTCBCCCCCTTEECCCSSEEEEC-----SSHHHHHHHHHH-TTBCCBCSCSSCGGGSHHHHTTSCCTTSCHH
T ss_pred HHHHhccCCCccccCCCCCCcceeEEEEEEC-----CCHHHHHHHHHH-CCCceecCCCCccccchhhcccCCCCCCChh
Confidence 88888887 77664 3556666764443211 156788888876 8999988532110 0
Q ss_pred ----CCceEEEEEec-CChhHHHHHHHHHHHHHHHhh
Q 042816 129 ----EPGWFSFSFTL-LTEKDIHVVMERIRRISQTCK 160 (163)
Q Consensus 129 ----~~~~iRi~~~~-~~~~~l~~~~~~l~~~~~~~~ 160 (163)
..+.+||++.. .++++++.+++.|.+++++++
T Consensus 361 ~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~l~ 397 (399)
T 2oga_A 361 AESFARQVLSLPIGPHLERPQALRVIDAVREWAERVD 397 (399)
T ss_dssp HHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 02689999863 488999999999999887654
No 167
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.04 E-value=6.6e-10 Score=86.86 Aligned_cols=140 Identities=14% Similarity=0.077 Sum_probs=93.5
Q ss_pred c-eeEEEEEecCHHHHHHHHHhh---------cccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 042816 6 G-FRISVIYSYNNSVLAAAKKLA---------RFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL 75 (163)
Q Consensus 6 G-~RiG~~i~~~~~~~~~~~~~~---------~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 75 (163)
| +|+||+++ ++++++.+.... ..++.++++|.++...|+.-+ + +...+.++++.+++.+.|+.+
T Consensus 296 G~~plg~v~~-~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~---~--~~~~~~~~~~~~~l~~~L~~l 369 (476)
T 3i5t_A 296 GYVPLGGLAI-SEAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELME---R--EGIVDQAREMADYFAAALASL 369 (476)
T ss_dssp TSSCCEEEEE-CHHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHH---H--TTHHHHHHHHHHHHHHHHHTT
T ss_pred CCcCeEEEEE-CHHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHH---h--HHHHHHHHHHHHHHHHHHHHH
Confidence 7 99999999 999999987642 135788999998888886431 1 234445555556666655543
Q ss_pred ----CCccccCCceeEEEeecCCccc-CCCh----hhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEe-cCChhHH
Q 042816 76 ----GIECAKSNGGFYCWADMSGLIS-SYSE----KGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFT-LLTEKDI 145 (163)
Q Consensus 76 ----g~~~~~~~~g~~~~~~~~~~~~-~~~~----~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~-~~~~~~l 145 (163)
.+...++.|. ++++++..... .... .....+++.|++ +||.+.|. .+++||+.. .++++++
T Consensus 370 ~~~~~v~~v~~~G~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~-------g~~iRi~p~l~~t~e~i 440 (476)
T 3i5t_A 370 RDLPGVAETRSVGL-VGCVQCLLDPTRADGTAEDKAFTLKIDERCFE-LGLIVRPL-------GDLCVISPPLIISRAQI 440 (476)
T ss_dssp TTSTTEEEEEEETT-EEEEEECCC-----CCHHHHHHHHHHHHHHHH-TTEECEEE-------TTEEEECCCTTCCHHHH
T ss_pred hcCCCeEEEEecCc-eeEEEEecCccccccccchhHHHHHHHHHHHH-CCCEEEec-------CCEEEEECCCCCCHHHH
Confidence 2444455555 55667654210 0000 025678888876 89999983 178999943 2399999
Q ss_pred HHHHHHHHHHHHHhh
Q 042816 146 HVVMERIRRISQTCK 160 (163)
Q Consensus 146 ~~~~~~l~~~~~~~~ 160 (163)
++++++|.++++++.
T Consensus 441 ~~~l~~l~~~l~~~~ 455 (476)
T 3i5t_A 441 DEMVAIMRQAITEVS 455 (476)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999987654
No 168
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.04 E-value=3.1e-09 Score=82.86 Aligned_cols=144 Identities=14% Similarity=0.077 Sum_probs=91.5
Q ss_pred CCC-CceeEEEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHH----------
Q 042816 2 LSL-PGFRISVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKF---------- 68 (163)
Q Consensus 2 ~~~-~G~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l---------- 68 (163)
|+. +|+|+||++++++++++.+...... .+++++.|.++...+++.. ..+++..+......+++
T Consensus 280 ~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~~~~~~~~a~~~al~~~~---~r~~~~~~~~~~l~~~l~~~~~v~~~~ 356 (464)
T 1ibj_A 280 IAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTMA---LRIEKQQENARKIAMYLSSHPRVKKVY 356 (464)
T ss_dssp TTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHHHHHHTTHH---HHHHHHHHHHHHHHHHHHTCTTCCEEE
T ss_pred ccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCCCCHHHHHHHHhchhhHH---HHHHHHHHHHHHHHHHHHhCCCceEEE
Confidence 444 4899999999436888888776642 4678888988888887642 22222222222222222
Q ss_pred HHHhhhc-CCccccCC---ceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCC------------CCCC-----
Q 042816 69 VAGLRQL-GIECAKSN---GGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGS------------SCHC----- 127 (163)
Q Consensus 69 ~~~l~~~-g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~------------~f~~----- 127 (163)
++.|+++ ++++.+++ .|.++|++++.. .....+.+.|.. .||.+.+|. .+..
T Consensus 357 ~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~~------~~~~~~~~~L~~-~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~ 429 (464)
T 1ibj_A 357 YAGLPDHPGHHLHFSQAKGAGSVFSFITGSV------ALSKHLVETTKY-FSIAVSFGSVKSLISMPCFMSHASIPAEVR 429 (464)
T ss_dssp CTTSTTSTTHHHHTTTCSCCCSEEEEECSCH------HHHHHHHHHCSS-SEECSCCCSSSCEEECTTTTTTCSCCSSSS
T ss_pred CCCCCCCcchHHHhccCCCCceEEEEEECCH------HHHHHHHHhcCc-ceEeecCCCCceeeecccccccccCCHHHH
Confidence 2334444 55555554 244677777531 123457776654 799998885 2221
Q ss_pred ----CCCceEEEEEecCChhHHHHHHHHHHHHHHH
Q 042816 128 ----IEPGWFSFSFTLLTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 128 ----~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~ 158 (163)
..++++|||++. |+++++++.|.+++++
T Consensus 430 ~~~g~~~~~iRlsvg~---edi~~li~~L~~al~~ 461 (464)
T 1ibj_A 430 EARGLTEDLVRISAGI---EDVDDLISDLDIAFKT 461 (464)
T ss_dssp SSSSCCTTCEEEECCS---SCHHHHHHHHHHHHHS
T ss_pred HhcCCCcCeEEEEeCC---CCHHHHHHHHHHHHhh
Confidence 125799999996 8999999999998865
No 169
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.04 E-value=3.6e-09 Score=80.63 Aligned_cols=140 Identities=14% Similarity=0.096 Sum_probs=83.9
Q ss_pred CCCCCceeE-EEEEecCHHHHH-HHHHhhccc---CCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 042816 1 DLSLPGFRI-SVIYSYNNSVLA-AAKKLARFS---SVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL 75 (163)
Q Consensus 1 ~~~~~G~Ri-G~~i~~~~~~~~-~~~~~~~~~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 75 (163)
.|+.||+|+ ||+++ ++++++ .+......+ +.+++.|.++...++.. ..++++. .++.+.+.+.|+++
T Consensus 211 ~~~~~g~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~----~~~~~~l~~~l~~~ 282 (398)
T 2rfv_A 211 YINGHGDVIGGIIVG-KQEFIDQARFVGLKDITGGCMSPFNAWLTLRGVKTL---GIRMERH----CENALKIARFLEGH 282 (398)
T ss_dssp TTTCSSCCCCEEEEE-CHHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTTH---HHHHHHH----HHHHHHHHHHHHTC
T ss_pred cccCCCCceEEEEEE-CHHHHHHHHHHHHHhCCCCCCCHHHHHHHHhhhhhH---HHHHHHH----HHHHHHHHHHHHcC
Confidence 378899999 99999 888877 565444433 67888898888888764 3434433 33445555555442
Q ss_pred ---------------CCccccC----CceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCC----------
Q 042816 76 ---------------GIECAKS----NGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCH---------- 126 (163)
Q Consensus 76 ---------------g~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~---------- 126 (163)
++++..| .++++ +++++..- .+...+.+.+.. .|+.+.+|..|.
T Consensus 283 ~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~-~~~~~~~~-----~~~~~l~~~~~~-~~i~~~~G~~~~li~~~~~~~~ 355 (398)
T 2rfv_A 283 PSITRVYYPGLSSHPQYELGQRQMSLPGGII-SFEIAGGL-----EAGRRMINSVEL-CLLAVSLGDTETLIQHPASMTH 355 (398)
T ss_dssp TTEEEEECTTSTTSTTHHHHHHHCSSCCSEE-EEEETTHH-----HHHHHHHTTCSS-SEECSCCSSSSCEEECHHHHTS
T ss_pred CCeeEEECCCCCCCccHHHHHhhCCCCceEE-EEEEcCCH-----HHHHHHHHhCCc-ceeccCCCCcceeeeccccccc
Confidence 2333333 35555 44887410 123334333322 488888887652
Q ss_pred -----------CCCCceEEEEEecCChhHHHHHHHHHHHHHHH
Q 042816 127 -----------CIEPGWFSFSFTLLTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 127 -----------~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~ 158 (163)
...++.+|||++. +..++.++.+.+++++
T Consensus 356 ~~~~~~~~~~~g~~~~~iRls~~~---~~~~~~i~~l~~al~~ 395 (398)
T 2rfv_A 356 SPVAPEERLKAGITDGLIRLSVGL---EDPEDIINDLEHAIRK 395 (398)
T ss_dssp SSSCHHHHHHTTCCTTEEEEECCS---SCHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHhcCCCCCeEEEEecC---CCHHHHHHHHHHHHHh
Confidence 0126899999986 3344456666665554
No 170
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.03 E-value=4.2e-10 Score=85.87 Aligned_cols=138 Identities=14% Similarity=0.085 Sum_probs=97.8
Q ss_pred CCceeE-EEEEecCHHHHHHHHHhh-----------------------c--ccCCChHHHHHHHHhcCChHHHHHHHHHH
Q 042816 4 LPGFRI-SVIYSYNNSVLAAAKKLA-----------------------R--FSSVSAPSQNLLVSMLSDTKFVQKFININ 57 (163)
Q Consensus 4 ~~G~Ri-G~~i~~~~~~~~~~~~~~-----------------------~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~ 57 (163)
.+|.|+ ||+++ ++++++.+.... . ..+++.+.+.++..+++.-. +..+++.
T Consensus 230 ~~g~~~~g~l~~-~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~ 306 (416)
T 1qz9_A 230 NGGPGSQAFVWV-SPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFA--QTDMASL 306 (416)
T ss_dssp CCCTTCCCEEEE-CTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHT--TSCHHHH
T ss_pred CCCCCCeEEEEE-CHHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHH--hcCHHHH
Confidence 357777 99999 777766554320 1 12456666665555554211 1345778
Q ss_pred HHHHHHHHHHHHHHhhhc----CCccccCC----ceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCC
Q 042816 58 RERLRRLYVKFVAGLRQL----GIECAKSN----GGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIE 129 (163)
Q Consensus 58 ~~~~~~~~~~l~~~l~~~----g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~ 129 (163)
++.++++++++.+.|++. |+++..+. .+.++|++++ +..++.+.|.+ +||.+.+ . .
T Consensus 307 ~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~~l~~-~gi~~~~----~--~ 370 (416)
T 1qz9_A 307 RRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHP---------EGYAVIQALID-RGVIGDY----R--E 370 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECT---------THHHHHHHHHT-TTEECEE----E--T
T ss_pred HHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecC---------CHHHHHHHHHh-CCcEecc----C--C
Confidence 888899999999999886 78877664 2456888887 35788888876 7998743 1 2
Q ss_pred CceEEEEEe--cCChhHHHHHHHHHHHHHHHhh
Q 042816 130 PGWFSFSFT--LLTEKDIHVVMERIRRISQTCK 160 (163)
Q Consensus 130 ~~~iRi~~~--~~~~~~l~~~~~~l~~~~~~~~ 160 (163)
++++||+++ ..++++++++++.|.+++++..
T Consensus 371 ~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~~~ 403 (416)
T 1qz9_A 371 PRIMRFGFTPLYTTFTEVWDAVQILGEILDRKT 403 (416)
T ss_dssp TTEEEEECCTTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred CCeEEEeCcccCCCHHHHHHHHHHHHHHHhccc
Confidence 689999997 4589999999999999887643
No 171
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.00 E-value=1.1e-08 Score=77.30 Aligned_cols=144 Identities=11% Similarity=0.071 Sum_probs=96.0
Q ss_pred CCCCceeEEEEEecCHH-H--HHHHHHhhcc-------------cC----CChHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 042816 2 LSLPGFRISVIYSYNNS-V--LAAAKKLARF-------------SS----VSAPSQNLLVSMLSDTKFVQKFININRERL 61 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~-~--~~~~~~~~~~-------------~~----~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 61 (163)
.+++|.|+||+++ +++ + ++.+...... .+ .+.+ +.++ ++.. .+++++.++.+
T Consensus 188 K~l~g~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~a~--~~~~----~~~l~~~~~~~ 259 (388)
T 1b9h_A 188 KLMTAGEGGAVVF-PDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEF-SASV--LRAQ----LARLDEQIAVR 259 (388)
T ss_dssp SSSCSSSCEEEEE-CTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHH-HHHH--HHHH----HTTHHHHHHHH
T ss_pred CcccCCCeEEEEE-CCHHHHHHHHHHHHHhCCCCccCccceeecccccCCcCHH-HHHH--HHHH----HHHHHHHHHHH
Confidence 5677889999999 554 6 5666543321 01 2222 2222 2111 23456677888
Q ss_pred HHHHHHHHHHhhhc-CCcccc------CCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCC------
Q 042816 62 RRLYVKFVAGLRQL-GIECAK------SNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCI------ 128 (163)
Q Consensus 62 ~~~~~~l~~~l~~~-g~~~~~------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~------ 128 (163)
+++++++.+.|+++ |+++.. +.+++++|++++... ..+..++.+.|.+ +||.+.++..-...
T Consensus 260 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~L~~-~gI~v~~~~~~~~~~~~~~~ 334 (388)
T 1b9h_A 260 DERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLT----EERRNALVDRLVE-AGLPAFAAFRAIYRTDAFWE 334 (388)
T ss_dssp HHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCC----HHHHHHHHHHHHH-TTCCEEECCCCGGGSHHHHH
T ss_pred HHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcC----cccHHHHHHHHHH-CCCCcccccCccccChHhHh
Confidence 88999999999988 877765 466889999998520 0156789988876 89999887532100
Q ss_pred ---------------------CCceEEEEEec-C-ChhHHHHHHHHHHHHHHH
Q 042816 129 ---------------------EPGWFSFSFTL-L-TEKDIHVVMERIRRISQT 158 (163)
Q Consensus 129 ---------------------~~~~iRi~~~~-~-~~~~l~~~~~~l~~~~~~ 158 (163)
..+.+||++.. . ++++++..++.|.+++++
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 335 LGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVAR 387 (388)
T ss_dssp SSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred cCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 02368999865 5 678999999999887754
No 172
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.00 E-value=1.8e-09 Score=83.38 Aligned_cols=94 Identities=13% Similarity=0.048 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhc-CCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEE--cCCCCCCCC
Q 042816 52 KFININRERLRRLYVKFVAGLRQL-GIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNV--TPGSSCHCI 128 (163)
Q Consensus 52 ~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v--~pg~~f~~~ 128 (163)
+.+++..+.+.++++++.+.|+++ |+++..+. .+|.++.+... .+..++++.|.+ +||.+ .++..|.
T Consensus 340 ~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~~~~~~~~~~~------~~~~~~~~~L~~-~gi~v~~~~~~~~~-- 409 (438)
T 1wyu_A 340 EGLREVALKSVEMAHKLHALLLEVPGVRPFTPK-PFFNEFALALP------KDPEAVRRALAE-RGFHGATPVPREYG-- 409 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCS-SBCSEEEEECS------SCHHHHHHHHHH-TTCCCCEECCTTSC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCC-CeEEEEEEeCC------CCHHHHHHHHHH-CCceeccccccccC--
Confidence 346788888999999999999998 99887654 33332233211 157889999887 79999 7777665
Q ss_pred CCceEEEEEec-CChhHHHHHHHHHHHHH
Q 042816 129 EPGWFSFSFTL-LTEKDIHVVMERIRRIS 156 (163)
Q Consensus 129 ~~~~iRi~~~~-~~~~~l~~~~~~l~~~~ 156 (163)
++++|||+.. .+.++++.+++.|.+++
T Consensus 410 -~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 410 -ENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp -SSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred -CCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 6899999983 27889999999887753
No 173
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=98.93 E-value=6.5e-09 Score=79.76 Aligned_cols=145 Identities=17% Similarity=0.143 Sum_probs=92.6
Q ss_pred CCCCceeEEEEEecC-HHHHHHHHHhhccc-----CC------ChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Q 042816 2 LSLPGFRISVIYSYN-NSVLAAAKKLARFS-----SV------SAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFV 69 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~-~~~~~~~~~~~~~~-----~~------s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 69 (163)
++++|.|+||+++ + +++++.+....... .. ..+.+.+++..+.. .+.++...+...++.+++.
T Consensus 200 K~l~~~~~G~~v~-~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~----~~~~~~~~~~~~~~~~~l~ 274 (424)
T 2po3_A 200 KAVNAFEGGAVVT-DDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTS----LDAFPEVIDRNRRNHAAYR 274 (424)
T ss_dssp SSSCCSSCEEEEE-SCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCeEEEe-CCHHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
Confidence 6788899999999 6 89999887765421 00 01223333333322 2345566777777888888
Q ss_pred HHhhhc-CCcccc-CCce---eEEE-eecCC---cccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCC------------
Q 042816 70 AGLRQL-GIECAK-SNGG---FYCW-ADMSG---LISSYSEKGELELWDKLLNVAKVNVTPGSSCHCI------------ 128 (163)
Q Consensus 70 ~~l~~~-g~~~~~-~~~g---~~~~-~~~~~---~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~------------ 128 (163)
+.|+++ |+++.. |+++ +++| ++++. .. +..++.+.|.+ +||.+.+. |...
T Consensus 275 ~~L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~l~~~L~~-~gI~v~~~--~~~~~~~~~~~~~~g~ 345 (424)
T 2po3_A 275 EHLADLPGVLVADHDRHGLNNHQYVIVEIDEATTGI------HRDLVMEVLKA-EGVHTRAY--FSPGCHELEPYRGQPH 345 (424)
T ss_dssp HHTCSCTTEEECCGGGGSCCCCCCEEEEECHHHHSS------CHHHHHHHHHH-TTEECBCT--TCSCGGGSTTTTTSCC
T ss_pred HHhccCCCccccCCCCCCccccEEEEEEECCccchh------hHHHHHHHHHH-CCCceecc--cCCccccchhhhhcCC
Confidence 999887 777765 4444 3443 67763 22 56788887765 89999872 2200
Q ss_pred --CCce-------EEEEE-ecCChhHHHHHHHHHHHHHHHhh
Q 042816 129 --EPGW-------FSFSF-TLLTEKDIHVVMERIRRISQTCK 160 (163)
Q Consensus 129 --~~~~-------iRi~~-~~~~~~~l~~~~~~l~~~~~~~~ 160 (163)
.++. +|+++ ...++++++.+++.|.+++++..
T Consensus 346 ~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~~~~ 387 (424)
T 2po3_A 346 APLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRLCATRGR 387 (424)
T ss_dssp CCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHHHhhhH
Confidence 1233 55552 23488999999999998886643
No 174
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=98.47 E-value=1e-10 Score=91.25 Aligned_cols=142 Identities=11% Similarity=0.058 Sum_probs=90.6
Q ss_pred CCCCceeEEEEEecCHHHHHHHHH-----hhc--ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKK-----LAR--FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQ 74 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~-----~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 74 (163)
+|. |+|+||+++ ++++++.+.. ... .++.|+++|.++...|+.-. + +...+.+.++.+++.+.|++
T Consensus 302 lg~-G~piG~v~~-~~~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~---~--~~~~~~~~~~~~~l~~~L~~ 374 (465)
T 2yky_A 302 IGG-GMSFGAFGG-RRDLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIY---T--RQAASDLSASGDRFRANLNR 374 (465)
Confidence 454 899999999 8999998876 111 25778888888776665321 1 12333333344444444433
Q ss_pred ----cCCccccCCceeEEEeecCC-cccC------CChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChh
Q 042816 75 ----LGIECAKSNGGFYCWADMSG-LISS------YSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEK 143 (163)
Q Consensus 75 ----~g~~~~~~~~g~~~~~~~~~-~~~~------~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~ 143 (163)
+++....+..|.++|+.++. .... .+......+++.|++ +||++.|+. |.. +++.. +++
T Consensus 375 ~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~-~GV~v~p~~-~~~-------~s~~~-t~e 444 (465)
T 2yky_A 375 IAVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLR-KGIYLAPRG-MYA-------LSLEI-ADA 444 (465)
Confidence 23333345567788888764 1100 001124678888886 899999975 331 66654 889
Q ss_pred HHHHHHHHHHHHHHHhh
Q 042816 144 DIHVVMERIRRISQTCK 160 (163)
Q Consensus 144 ~l~~~~~~l~~~~~~~~ 160 (163)
++++++++|.+++++++
T Consensus 445 did~~l~~l~~~l~~~~ 461 (465)
T 2yky_A 445 GRDAFAEALADFIGEQR 461 (465)
Confidence 99999999999988764
No 175
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=98.90 E-value=4.2e-09 Score=81.63 Aligned_cols=132 Identities=15% Similarity=0.094 Sum_probs=92.3
Q ss_pred eEEEEEecCHHHHHHHH-----Hhhc--ccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-----
Q 042816 8 RISVIYSYNNSVLAAAK-----KLAR--FSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL----- 75 (163)
Q Consensus 8 RiG~~i~~~~~~~~~~~-----~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----- 75 (163)
|+||+++ ++++++.+. .... .++.+++.|.++..+|+.. .+ +...+.++++.+++.+.|++.
T Consensus 303 ~iG~~~~-~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~---~~--~~~~~~~~~~~~~l~~~L~~l~~~~~ 376 (449)
T 2cjg_A 303 QVCGVMA-GRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVI---EA--EGLFERAVQHGKYLRARLDELAADFP 376 (449)
T ss_dssp SSEEEEE-CGGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHH---HH--HTHHHHHHHHHHHHHHHHHHHHHHST
T ss_pred cEEEEEE-CHHHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHH---Hh--ccHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 8999999 888877522 1111 2567889999888888632 11 234556666677777777653
Q ss_pred C-CccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CChhHHHHHHHHHH
Q 042816 76 G-IECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LTEKDIHVVMERIR 153 (163)
Q Consensus 76 g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~~l~~~~~~l~ 153 (163)
+ +...++.|. +++++++.. .+..++++.|++ +||.+.|+. ++++|++++. ++++++++++++|.
T Consensus 377 ~~~~~~~~~g~-~~~~~~~~~------~~~~~~~~~l~~-~Gv~v~~~g------~~~iRi~~~~~~t~e~i~~~l~~l~ 442 (449)
T 2cjg_A 377 AVVLDPRGRGL-MCAFSLPTT------ADRDELIRQLWQ-RAVIVLPAG------ADTVRFRPPLTVSTAEIDAAIAAVR 442 (449)
T ss_dssp TTSEEEEEETT-EEEEECSSH------HHHHHHHHHHHH-TTEECEEET------TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred CceeeEeeccE-EEEEEECCh------HHHHHHHHHHHH-CCeEEecCC------CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 2 444556655 456788752 156789999986 899999862 5899997653 48999999999999
Q ss_pred HHHHHh
Q 042816 154 RISQTC 159 (163)
Q Consensus 154 ~~~~~~ 159 (163)
++++++
T Consensus 443 ~~l~~~ 448 (449)
T 2cjg_A 443 SALPVV 448 (449)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 988764
No 176
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=98.87 E-value=5.8e-08 Score=73.49 Aligned_cols=141 Identities=11% Similarity=0.101 Sum_probs=95.6
Q ss_pred eeEEEEEecCHHHHHHHHHhhc-----------------------c-cCCChHHHHHHHHhcCChHHHHHH-HHHHHHHH
Q 042816 7 FRISVIYSYNNSVLAAAKKLAR-----------------------F-SSVSAPSQNLLVSMLSDTKFVQKF-ININRERL 61 (163)
Q Consensus 7 ~RiG~~i~~~~~~~~~~~~~~~-----------------------~-~~~s~~~q~~~~~~l~~~~~~~~~-~~~~~~~~ 61 (163)
..+|++++ ++++++.+..... + .+++...+.++..+++.- .+. ++...+.+
T Consensus 205 ~g~g~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~---~~~g~~~~~~~~ 280 (379)
T 3ke3_A 205 PCAGLVML-SAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEA---KEIGFDILRDAQ 280 (379)
T ss_dssp CCEEEEEE-CHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHH---HHHCHHHHHHHH
T ss_pred CceEEEEE-CHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHH---HHhcHHHHHHHH
Confidence 35899999 8998887764211 0 145556666666665432 232 57888888
Q ss_pred HHHHHHHHHHhhhcCCccccCC---ceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCC---CCCceEEE
Q 042816 62 RRLYVKFVAGLRQLGIECAKSN---GGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHC---IEPGWFSF 135 (163)
Q Consensus 62 ~~~~~~l~~~l~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~---~~~~~iRi 135 (163)
+++.+++.+.|+++|+++..+. ++....+..+. ....+.+.|.+ +||.+.||..+.. ...+.+||
T Consensus 281 ~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~~--------~~~~~~~~L~~-~Gi~v~~g~~~~~~~~~~~~~lRi 351 (379)
T 3ke3_A 281 WELGNRVRKVLTDKGIESVAAEGFEAPGVVVSYTER--------DDMHKGSAFAE-AGLQIAAGVPLKVGEPDNFKTFRL 351 (379)
T ss_dssp HHHHHHHHHHHHHTTCCBSBCTTCBCSSEEEEECSC--------HHHHSSHHHHH-TTCCCEECCCCSSCCCTTCCEEEE
T ss_pred HHHHHHHHHHHHHcCCEecCCccccCceEEEEccCC--------cchHHHHHHHH-CCeEEeCCccccccccCcCCEEEE
Confidence 9999999999999888776543 22222233332 12233555654 8999999986643 12679999
Q ss_pred EEec-CChhHHHHHHHHHHHHHHHhh
Q 042816 136 SFTL-LTEKDIHVVMERIRRISQTCK 160 (163)
Q Consensus 136 ~~~~-~~~~~l~~~~~~l~~~~~~~~ 160 (163)
++.. ++.++++.+++.|.++++++.
T Consensus 352 s~~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 352 GLFGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp ECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred eCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence 9863 377899999999999988764
No 177
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=98.86 E-value=2.1e-08 Score=78.46 Aligned_cols=141 Identities=15% Similarity=0.089 Sum_probs=94.0
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc-cc------CCC---------hHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR-FS------SVS---------APSQNLLVSMLSDTKFVQKFININRERLRRLY 65 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~-~~------~~s---------~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 65 (163)
++.++.++||+++ +++.......... .+ +.+ ..++.++...+.. ..+++..+...++.
T Consensus 281 ~l~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~-----~~~~~~~~~~~~~~ 354 (497)
T 3mc6_A 281 YGFAPKGSSVIMY-RNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGE-----NGYIESCQEIVGAA 354 (497)
T ss_dssp TTCCCSSCEEEEC-SSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHH
T ss_pred hcCCCCCceeEEe-cCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhH-----HHHHHHHHHHHHHH
Confidence 4568899999999 4443332211111 11 001 2335555555533 33466777778889
Q ss_pred HHHHHHhhh-c-CCccc-cCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCCh
Q 042816 66 VKFVAGLRQ-L-GIECA-KSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTE 142 (163)
Q Consensus 66 ~~l~~~l~~-~-g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~ 142 (163)
+++.+.|++ + |+++. +|.++++.| ..+. .+..++.+.|.+ +||.+.++.. +..+|++++..+.
T Consensus 355 ~~l~~~L~~~~~g~~~~~~~~~~~v~~-~~~~-------~~~~~l~~~L~~-~Gi~v~~~~~-----~~~~ri~~~~~t~ 420 (497)
T 3mc6_A 355 MKFKKYIQENIPDLDIMGNPRYSVISF-SSKT-------LNIHELSDRLSK-KGWHFNALQK-----PVALHMAFTRLSA 420 (497)
T ss_dssp HHHHHHHHHSCTTCEECSCCCSSEEEE-ECTT-------TTHHHHHHHHHT-TTCBCEECCS-----SCCEEEECCTTTT
T ss_pred HHHHHHHHhcCCCEEEecCCCeeEEEE-eCCC-------CCHHHHHHHHHh-CCEEEecCCC-----CCeEEEEEeCCCH
Confidence 999999999 4 88876 456665555 4443 267889998876 7999876532 3468999987688
Q ss_pred hHHHHHHHHHHHHHHHhhhc
Q 042816 143 KDIHVVMERIRRISQTCKSH 162 (163)
Q Consensus 143 ~~l~~~~~~l~~~~~~~~~~ 162 (163)
++++++++.|.+++++++.+
T Consensus 421 e~i~~~~~~L~~~l~~~~~~ 440 (497)
T 3mc6_A 421 HVVDEICDILRTTVQELKSE 440 (497)
T ss_dssp CTHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999877543
No 178
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=98.85 E-value=1.2e-09 Score=84.70 Aligned_cols=100 Identities=16% Similarity=0.234 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHhhhcCCccccCCceeEEEeecCC---cccCCChhhHHHHHHHHHHhcCeEEcCCCCC--CC-C----
Q 042816 59 ERLRRLYVKFVAGLRQLGIECAKSNGGFYCWADMSG---LISSYSEKGELELWDKLLNVAKVNVTPGSSC--HC-I---- 128 (163)
Q Consensus 59 ~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f--~~-~---- 128 (163)
+...++.+++.+.|++.|+.+. |.+++++|++++. ...... .+...+++.|++++||.+.|+..| +. +
T Consensus 328 ~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~ 405 (467)
T 2oqx_A 328 AYRIAQVQYLVDGLEEIGVVCQ-QAGGHAAFVDAGKLLPHIPADQ-FPAQALACELYKVAGIRAVEIGSFLLGRDPKTGK 405 (467)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEE-EECSSCEEEEHHHHSTTSCGGG-CHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCS
T ss_pred HHHHHHHHHHHHHHHHCCCeee-cCCceEEEEechhhcccCCccc-ccHHHHHHHHHHhcCceecccccccccccccccc
Confidence 4456778888899988888888 8899999999853 110000 025567888845589999995432 11 0
Q ss_pred ----CCceEEEEEec--CChhHHHHHHHHHHHHHHHhh
Q 042816 129 ----EPGWFSFSFTL--LTEKDIHVVMERIRRISQTCK 160 (163)
Q Consensus 129 ----~~~~iRi~~~~--~~~~~l~~~~~~l~~~~~~~~ 160 (163)
..+++|++++. .+++++++++++|.+++++.+
T Consensus 406 ~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~~~ 443 (467)
T 2oqx_A 406 QLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAA 443 (467)
T ss_dssp BCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHHSGG
T ss_pred cccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 13799999983 388999999999999987654
No 179
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=98.82 E-value=4.6e-08 Score=76.94 Aligned_cols=142 Identities=13% Similarity=0.080 Sum_probs=93.7
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhh---------cc--c-CCChH---HHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLA---------RF--S-SVSAP---SQNLLVSMLSDTKFVQKFININRERLRRLYV 66 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~---------~~--~-~~s~~---~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 66 (163)
++.+|.++||+++.++.+........ .. . +.+.. .+.++...+. ...+++..+...++++
T Consensus 313 ~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~-----~~~~~~~~~~~~~~~~ 387 (514)
T 3mad_A 313 YGYGAKGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLG-----EEGYLDATRRILQAAD 387 (514)
T ss_dssp TTCCCSSCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHH
T ss_pred ccCCCCCeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHh-----HHHHHHHHHHHHHHHH
Confidence 34678899999994444432211000 00 1 12222 2333333332 3445777888888999
Q ss_pred HHHHHhhhc-CCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec--CChh
Q 042816 67 KFVAGLRQL-GIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL--LTEK 143 (163)
Q Consensus 67 ~l~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~--~~~~ 143 (163)
++.+.|+++ |+++..+..+ ++|+..+.. +..++.+.|.+ +||.+ +|..| ++++|++++. .+++
T Consensus 388 ~l~~~L~~~~g~~~~~~~~~-~~~~~~~~~-------~~~~l~~~L~~-~Gi~v-~g~~~----~~~~Ri~~~~~~~~~e 453 (514)
T 3mad_A 388 RLKAGVRAIPSLKILGDPLW-VIAVASDEL-------NIYQVMEEMAG-RGWRL-NGLHR----PPAFHVALTLRHTEPG 453 (514)
T ss_dssp HHHHHHHTSTTCEESSCCSS-EEEEECSSS-------CHHHHHHHHHT-TTCBC-EEETT----TTEEEEECCGGGGSTT
T ss_pred HHHHHHhhCCCeEEeCCCeE-EEEEeCCCC-------CHHHHHHHHHh-cCCEe-ccCCC----CCeEEEEEecCCCCHH
Confidence 999999998 8888766655 566665432 67889998876 79988 55433 4689999973 2568
Q ss_pred HHHHHHHHHHHHHHHhhhc
Q 042816 144 DIHVVMERIRRISQTCKSH 162 (163)
Q Consensus 144 ~l~~~~~~l~~~~~~~~~~ 162 (163)
+++++++.|.+++++++..
T Consensus 454 ~i~~~l~~L~~~l~~~~~~ 472 (514)
T 3mad_A 454 VVDRFLADLQDAVAQVRAH 472 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 9999999999999877643
No 180
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=98.77 E-value=2.8e-07 Score=69.76 Aligned_cols=138 Identities=17% Similarity=0.064 Sum_probs=86.9
Q ss_pred CCCCceeE-EEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CC
Q 042816 2 LSLPGFRI-SVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL-GI 77 (163)
Q Consensus 2 ~~~~G~Ri-G~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~ 77 (163)
|+.||.|+ ||++++++++++.+...... .+.+++.+.++...++.- ....+.+.++.+.+.+.|+++ .+
T Consensus 200 ~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~l~~~l~~~~~l 272 (386)
T 1cs1_A 200 LNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRTL-------VPRMELAQRNAQAIVKYLQTQPLV 272 (386)
T ss_dssp TTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTTH-------HHHHHHHHHHHHHHHHHHTTCTTE
T ss_pred ccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhcccHH-------HHHHHHHHHHHHHHHHHHhcCCCe
Confidence 68899997 99999445888888776654 346777777666655532 233444556677777776664 22
Q ss_pred c--------------cc----cCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCC-------------
Q 042816 78 E--------------CA----KSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCH------------- 126 (163)
Q Consensus 78 ~--------------~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~------------- 126 (163)
. +. ...++++ .+.++. ...++.+.| ++.||.+.+++ |+
T Consensus 273 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~--------~~~~~~~~l-~~~gi~~~~~~-~g~~~sl~~~~~~~~ 341 (386)
T 1cs1_A 273 KKLYHPSLPENQGHEIAARQQKGFGAML-SFELDG--------DEQTLRRFL-GGLSLFTLAES-LGGVESLISHAATMT 341 (386)
T ss_dssp EEEECTTSTTSTTHHHHHHHCSSCCSEE-EEEESS--------CHHHHHHHH-HTCSSSEEBSC-CCSSSCEEEEGGGTT
T ss_pred EEEECCCCCCCccHHHHHHhcCCCceEE-EEEECC--------CHHHHHHHH-HhCCcceEccc-CCCcceeeecccccc
Confidence 1 11 1125544 445653 235566655 45899887421 11
Q ss_pred ------------CCCCceEEEEEecCChhHHHHHHHHHHHHHHHhh
Q 042816 127 ------------CIEPGWFSFSFTLLTEKDIHVVMERIRRISQTCK 160 (163)
Q Consensus 127 ------------~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~~~ 160 (163)
...++++|||++. ++.++.++.+.+++++..
T Consensus 342 ~~~~~~~~~~~~g~~~~~iRis~~~---~~~~~~i~~l~~al~~~~ 384 (386)
T 1cs1_A 342 HAGMAPEARAAAGISETLLRISTGI---EDGEDLIADLENGFRAAN 384 (386)
T ss_dssp TTTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHHHHT
T ss_pred cccCCHHHHHhcCCCCCeEEEEEcc---CCHHHHHHHHHHHHHHhh
Confidence 1125899999986 677888888888887654
No 181
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=98.76 E-value=2.7e-08 Score=76.31 Aligned_cols=144 Identities=13% Similarity=0.131 Sum_probs=93.7
Q ss_pred ceeEEEEEecCHHH-HHHHHHh---------hcccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 042816 6 GFRISVIYSYNNSV-LAAAKKL---------ARFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL 75 (163)
Q Consensus 6 G~RiG~~i~~~~~~-~~~~~~~---------~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 75 (163)
|.|+||+++ ++++ ...+... ....+++.+.+.++..+++.. .+++++.++.++++++++.+.|+++
T Consensus 250 g~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~---~~~~~~~~~~~~~~~~~l~~~L~~~ 325 (432)
T 3a9z_A 250 GPRIGALYV-RGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLV---SENCETYEAHMRDIRDYLEERLEAE 325 (432)
T ss_dssp CCSCEEEEE-TTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcceEEEE-ccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHH---HhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 567999999 6554 2222211 112456777787776676542 4567889999999999999999886
Q ss_pred -CCccc--cC-----CceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCC------------------C
Q 042816 76 -GIECA--KS-----NGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCI------------------E 129 (163)
Q Consensus 76 -g~~~~--~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~------------------~ 129 (163)
|+++. .| ..+..+++.++..- .+..++.+.+ .++.+.+|..+... .
T Consensus 326 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l---~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~ 397 (432)
T 3a9z_A 326 FGKRIHLNSRFPGVERLPNTCNFSIQGSQ-----LRGYMVLAQC---QTLLASVGASCHSDHEDRPSPVLLSCGIPVDVA 397 (432)
T ss_dssp HGGGEEESSCCTTCCBCTTEEEEEECSTT-----CCHHHHHHHC---SSEECBSSCGGGGGGTTSCCHHHHHTTCCHHHH
T ss_pred cCCcEEEeCCCCcccCCCCEEEEEeCCCC-----CcHHHHHHHh---cCeEEeccccccCCCCCCccHHHHhcCCCcccc
Confidence 65443 22 12334445555310 1345555543 37888877655321 1
Q ss_pred CceEEEEEecC-ChhHHHHHHHHHHHHHHHhhh
Q 042816 130 PGWFSFSFTLL-TEKDIHVVMERIRRISQTCKS 161 (163)
Q Consensus 130 ~~~iRi~~~~~-~~~~l~~~~~~l~~~~~~~~~ 161 (163)
++++||+++.. ++++++.+++.|.+++++++.
T Consensus 398 ~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~~ 430 (432)
T 3a9z_A 398 RNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEG 430 (432)
T ss_dssp TTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHS
T ss_pred CceEEEEcCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 37999999853 689999999999999987754
No 182
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=98.72 E-value=3.4e-07 Score=70.03 Aligned_cols=143 Identities=14% Similarity=0.066 Sum_probs=83.4
Q ss_pred CCCCc-eeEEEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHH--------
Q 042816 2 LSLPG-FRISVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVA-------- 70 (163)
Q Consensus 2 ~~~~G-~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-------- 70 (163)
||.|| +|+||++++++++++.+...... ...+++.|.++...++.. +..+++..+......+++.+
T Consensus 215 ~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~l---~~r~~~~~~n~~~l~~~l~~~~~v~~~~ 291 (403)
T 3cog_A 215 MNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKTL---HVRMEKHFKNGMAVAQFLESNPWVEKVI 291 (403)
T ss_dssp TTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTH---HHHHHHHHHHHHHHHHHHHTCTTEEEEE
T ss_pred ccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhHH---HHHHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 56666 58999999558898888776654 346788888887777764 33333333322222222222
Q ss_pred --Hhhhc-CCccccCC----ceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEc-------------CCCCCC----
Q 042816 71 --GLRQL-GIECAKSN----GGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVT-------------PGSSCH---- 126 (163)
Q Consensus 71 --~l~~~-g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~-------------pg~~f~---- 126 (163)
.|+++ ++++.+++ |+++.| .++. ...+..+ ++++.||.+. |++.+.
T Consensus 292 ~~~L~~~p~~~~~~~~~~~~g~~~~~-~l~~--------~~~~~~~-~l~~~~i~~~~~s~G~~~sl~~~p~~~~~~~~~ 361 (403)
T 3cog_A 292 YPGLPSHPQHELVKRQCTGCTGMVTF-YIKG--------TLQHAEI-FLKNLKLFTLAESLGGFESLAELPAIMTHASVL 361 (403)
T ss_dssp CTTSTTSTTHHHHHHHCSCCCSEEEE-EESS--------CHHHHHH-HHHHCSSSEECSCCSSSSCEEECTTTTTTTTSC
T ss_pred CCCCCCCCcHHHHHhcCCCCceEEEE-EecC--------CHHHHHH-HHHhCCcceEccCCCCcceeeecccccccccCC
Confidence 23333 44444443 787777 5653 1233444 4445777543 222221
Q ss_pred -------CCCCceEEEEEecCChhHHHHHHHHHHHHHHHhh
Q 042816 127 -------CIEPGWFSFSFTLLTEKDIHVVMERIRRISQTCK 160 (163)
Q Consensus 127 -------~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~~~ 160 (163)
...++++|||++. ++.++.++.|.+++++..
T Consensus 362 ~~~~~~~g~~~~~iRlSvg~---e~~~d~i~~l~~al~~~~ 399 (403)
T 3cog_A 362 KNDRDVLGISDTLIRLSVGL---EDEEDLLEDLDQALKAAH 399 (403)
T ss_dssp HHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHHHHC
T ss_pred HHHHHhcCCCcCeEEEEeCC---CCHHHHHHHHHHHHHHhh
Confidence 1126899999996 456677777777776543
No 183
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=98.72 E-value=4.2e-07 Score=69.48 Aligned_cols=149 Identities=9% Similarity=0.102 Sum_probs=91.9
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhcccC------------C-------C--------hHHHHHHH-HhcCChHHHHHH
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLARFSS------------V-------S--------APSQNLLV-SMLSDTKFVQKF 53 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~~~~------------~-------s--------~~~q~~~~-~~l~~~~~~~~~ 53 (163)
||. | |+||++++++++++.+........ . . ...+.++. ..+ +.
T Consensus 194 ~~~-g-~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l-------~~ 264 (418)
T 2c81_A 194 LTA-G-EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQL-------QE 264 (418)
T ss_dssp SCS-S-SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHH-------TT
T ss_pred cCC-C-CeEEEEECCHHHHHHHHHHHHhCccccccccccccchhhccccccccCcCCCcCHHHHHHHHHHH-------HH
Confidence 555 7 999999945888888876543210 0 0 11222221 111 22
Q ss_pred HHHHHHHHHHHHHHHHHHhhhc-CCccc-cCCc-eeEEE----eecCCcccCCChhhHHHHHHHHHHhcCeE---EcCCC
Q 042816 54 ININRERLRRLYVKFVAGLRQL-GIECA-KSNG-GFYCW----ADMSGLISSYSEKGELELWDKLLNVAKVN---VTPGS 123 (163)
Q Consensus 54 ~~~~~~~~~~~~~~l~~~l~~~-g~~~~-~~~~-g~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~gi~---v~pg~ 123 (163)
+++..+..+++.+++.+.|+++ |+++. ++++ +.+.| +.++... ..+ .+..++.+.|.+++||. +.+|.
T Consensus 265 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~l~~~L~~~~gI~~~~v~~~~ 342 (418)
T 2c81_A 265 LDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFDPVK-FGG-LNADQFCEILREKLNMGTFYLHPPY 342 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEECGGG-TTT-CCHHHHHHHHHHHHTCCTTTEECCC
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEEcccc-ccc-cCHHHHHHHHHHcCCCCcccccccc
Confidence 3455566666788888899887 78776 4666 33333 6666300 000 16788999888734999 88875
Q ss_pred CCCC--------------------------CC--------CceEEEEEec-C-ChhHHHHHHHHHHHHHHHhhh
Q 042816 124 SCHC--------------------------IE--------PGWFSFSFTL-L-TEKDIHVVMERIRRISQTCKS 161 (163)
Q Consensus 124 ~f~~--------------------------~~--------~~~iRi~~~~-~-~~~~l~~~~~~l~~~~~~~~~ 161 (163)
.... .. .+.+||++.. . ++++++..++.|.++++++..
T Consensus 343 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~~~ 416 (418)
T 2c81_A 343 LPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAILLAEPSHLSLLVDAVAELARKFCV 416 (418)
T ss_dssp CCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHTTC-
T ss_pred cccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHHHHhhcc
Confidence 2100 00 2589999953 4 789999999999998877654
No 184
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=98.70 E-value=1.3e-08 Score=78.97 Aligned_cols=114 Identities=11% Similarity=0.009 Sum_probs=79.2
Q ss_pred CCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhh-----------cCCccccCC----ceeEEEeecCCc
Q 042816 31 SVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQ-----------LGIECAKSN----GGFYCWADMSGL 95 (163)
Q Consensus 31 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------~g~~~~~~~----~g~~~~~~~~~~ 95 (163)
+++.+...++...++.-. +..+++.++.+.++++++.+.|++ .|+++..|. .|.++|+.++.
T Consensus 333 t~~~~~~~a~~aal~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~- 409 (465)
T 3e9k_A 333 NPPILLVCSLHASLEIFK--QATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSV- 409 (465)
T ss_dssp CCCHHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECC-
T ss_pred CccHHHHHHHHHHHHHHH--HcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecC-
Confidence 344444555555554321 122788899999999999999987 477777665 35667778773
Q ss_pred ccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEE--ecCChhHHHHHHHHHHHHHHHhhh
Q 042816 96 ISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSF--TLLTEKDIHVVMERIRRISQTCKS 161 (163)
Q Consensus 96 ~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~--~~~~~~~l~~~~~~l~~~~~~~~~ 161 (163)
+..++.+.|.+ +||.+. +. .++++|+++ ...+.++++.+++.|.+++++...
T Consensus 410 -------~~~~l~~~L~~-~Gi~v~----~~--~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~~~ 463 (465)
T 3e9k_A 410 -------PNKDVFQELEK-RGVVCD----KR--NPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSAET 463 (465)
T ss_dssp -------TTCCHHHHHHT-TTEECE----EE--TTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC---
T ss_pred -------CHHHHHHHHHH-CCEEEe----cC--CCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhccc
Confidence 45678888876 799986 22 268999998 334889999999999999876543
No 185
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=98.69 E-value=1.6e-08 Score=76.61 Aligned_cols=115 Identities=13% Similarity=0.111 Sum_probs=70.2
Q ss_pred CCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCccccCCc---eeEEEeecCCcccCCChhhHHH
Q 042816 31 SVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL-GIECAKSNG---GFYCWADMSGLISSYSEKGELE 106 (163)
Q Consensus 31 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~ 106 (163)
+++.+.+.++..+++.. .+++++.++.++++++++.+.|+ . |+++..+.+ +.++++.++.. +..+
T Consensus 262 ~~~~~~~~a~~~al~~~---~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 330 (400)
T 3vax_A 262 TLPVPLIMGLAEAAKIF---EAEHAQWQVAAQDLRSRLLAGLA-STSFQVNGDQDHVVPHILNLSFEDV-------DAEA 330 (400)
T ss_dssp CCCHHHHHHHHHHHHHH---HHSHHHHHHHHHHHHHHHHHHHT-TTTCEECSCTTSBCTTEEEEECTTC-------CHHH
T ss_pred CCCHHHHHHHHHHHHHH---HhhHHHHHHHHHHHHHHHHHhhC-CCCEEEeCCcccCCCCEEEEEeCCC-------CHHH
Confidence 45666666666666532 45678999999999999999999 6 888877665 34566666642 6788
Q ss_pred HHHHHHHhcCeEEcCCCCCCCC-------------C----CceEEEEE-ec-CChhHHHHHHHHHHHHHHH
Q 042816 107 LWDKLLNVAKVNVTPGSSCHCI-------------E----PGWFSFSF-TL-LTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 107 ~~~~l~~~~gi~v~pg~~f~~~-------------~----~~~iRi~~-~~-~~~~~l~~~~~~l~~~~~~ 158 (163)
+.+.|. +||.+.||..|... . ++++||++ +. .+.++++.+++.|.+++++
T Consensus 331 l~~~L~--~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 331 FLVTLK--DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp HHHHHH--HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC--------------------
T ss_pred HHHHHh--cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence 888775 89999999766431 1 48999999 53 3678899999999887754
No 186
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=98.66 E-value=2.1e-07 Score=72.24 Aligned_cols=138 Identities=11% Similarity=0.042 Sum_probs=90.5
Q ss_pred CCCceeEEEEEecCHHHHHHHHHhhcccC--CChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc----C
Q 042816 3 SLPGFRISVIYSYNNSVLAAAKKLARFSS--VSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL----G 76 (163)
Q Consensus 3 ~~~G~RiG~~i~~~~~~~~~~~~~~~~~~--~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----g 76 (163)
+.++.++||+++.++++++.+......+. .+.+.+.++...+. .+.+++..+.+.++++++.+.|+++ |
T Consensus 300 ~~~p~g~G~l~~~~~~~~~~l~~~~~g~~~~~~~~~~~aal~~l~-----~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g 374 (456)
T 2z67_A 300 LLTPIGGGLVYSTDAEFIKEISLSYPGRASATPVVNTLVSLLSMG-----SKNYLELVKNQKNSKKLLDELLNDLSKKTG 374 (456)
T ss_dssp HCCCSSCEEEEESCHHHHHHHHTTSCSCBCSHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred cCCCCCeEEEEEcCHHHHhhcCcCCCCCCCCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHhcccccC
Confidence 34568999999956788877733222121 12333444444442 3446788888899999999999887 8
Q ss_pred CccccCCceeEEEeec--CCcccCCChhhHHHHHHHHHHhcCe---EEc------CCCCCCCCCCceEEEEEec-CChhH
Q 042816 77 IECAKSNGGFYCWADM--SGLISSYSEKGELELWDKLLNVAKV---NVT------PGSSCHCIEPGWFSFSFTL-LTEKD 144 (163)
Q Consensus 77 ~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~gi---~v~------pg~~f~~~~~~~iRi~~~~-~~~~~ 144 (163)
+.+.+|+ ++ +++++ +. ...++.+.|.+ .|| .+. +|..+.....+++|+|++. .++++
T Consensus 375 ~~v~~~~-~~-v~~~~~~~~--------~~~~l~~~L~~-~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~t~ee 443 (456)
T 2z67_A 375 GKFLDVE-SP-IASCISVNS--------DPVEIAAKLYN-LRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTED 443 (456)
T ss_dssp CCBCCCC-CS-SEEEEECSS--------CHHHHHHHHHH-TTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHH
T ss_pred CEecCCC-Ce-EEEEEeccc--------HHHHHHHHHHH-cCCCcceEEeecCccccccccccCcchhhhhhhcCCCHHH
Confidence 8887777 43 44455 32 13678888876 664 443 2444433335799999883 48899
Q ss_pred HHHHHHHHHHHH
Q 042816 145 IHVVMERIRRIS 156 (163)
Q Consensus 145 l~~~~~~l~~~~ 156 (163)
++.+++.|++++
T Consensus 444 id~~l~~L~~~~ 455 (456)
T 2z67_A 444 IVNSVSKLEKIL 455 (456)
T ss_dssp HHHHHHHHHTC-
T ss_pred HHHHHHHHHHHh
Confidence 999999987653
No 187
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=98.66 E-value=3.6e-07 Score=71.70 Aligned_cols=147 Identities=11% Similarity=0.050 Sum_probs=94.8
Q ss_pred CCceeEEEEEecCH--------------HHHHHHHHhhcc---cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Q 042816 4 LPGFRISVIYSYNN--------------SVLAAAKKLARF---SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYV 66 (163)
Q Consensus 4 ~~G~RiG~~i~~~~--------------~~~~~~~~~~~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 66 (163)
+.|.|.|+++++++ ++.+.+++...+ .+++.....+++.++.... ....+...+.+.++++
T Consensus 268 l~Gp~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~--~~~~~~~~~~~~~na~ 345 (490)
T 2a7v_A 268 LRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQAC--TPMFREYSLQVLKNAR 345 (490)
T ss_dssp GCSCSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHH--SHHHHHHHHHHHHHHH
T ss_pred CccccchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHH
Confidence 46788999999332 356666655432 1233333333343443221 1233667778888999
Q ss_pred HHHHHhhhcCCcccc-CCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCC---CCCceEEEEEec---
Q 042816 67 KFVAGLRQLGIECAK-SNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHC---IEPGWFSFSFTL--- 139 (163)
Q Consensus 67 ~l~~~l~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~---~~~~~iRi~~~~--- 139 (163)
++.+.|++.|+++.. +.....+|+++.... .+..++.+.|. +.||.+.++..++. ..+..+||+...
T Consensus 346 ~L~~~L~~~G~~v~~~~t~t~lv~vdl~~~g-----~~~~~~~~~L~-~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~ 419 (490)
T 2a7v_A 346 AMADALLERGYSLVSGGTDNHLVLVDLRPKG-----LDGARAERVLE-LVSITANKNTCPGDRSAITPGGLRLGAPALTS 419 (490)
T ss_dssp HHHHHHHHTTCEEGGGSCSSSEEEEECTTTT-----CCHHHHHHHHH-HTTEECEEECCTTCCCSSSCSEEEEESHHHHH
T ss_pred HHHHHHHHcCcEEecCCCCCeEEEEEeCCCC-----CCHHHHHHHHH-hCCeEEecCccCCCCCCCCCCceEeccccccc
Confidence 999999999988864 345678899986421 15566776664 58999986543332 126789997743
Q ss_pred --CChhHHHHHHHHHHHHHHH
Q 042816 140 --LTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 140 --~~~~~l~~~~~~l~~~~~~ 158 (163)
.++++++...+.|.+++..
T Consensus 420 ~g~~~~d~~~~~~~i~~~l~~ 440 (490)
T 2a7v_A 420 RQFREDDFRRVVDFIDEGVNI 440 (490)
T ss_dssp TTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHh
Confidence 3678899888888887753
No 188
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=98.64 E-value=1.7e-07 Score=72.52 Aligned_cols=152 Identities=8% Similarity=-0.065 Sum_probs=94.0
Q ss_pred CCCCceeEEEEEecCHHHH-HHHHHhhccc-----------CC---ChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Q 042816 2 LSLPGFRISVIYSYNNSVL-AAAKKLARFS-----------SV---SAPSQNLLVSMLSDTKFVQKFININRERLRRLYV 66 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~-~~~~~~~~~~-----------~~---s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 66 (163)
|+++|.++||+++.+++++ +.+.....+. +. ..+.|.++...+. .+.+++..+.+.++++
T Consensus 263 ~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg-----~~g~~~~~~~~~~~a~ 337 (452)
T 2dgk_A 263 FGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLG-----REGYTKVQNASYQVAA 337 (452)
T ss_dssp TTCCCSSCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHH
T ss_pred ccCCCCCeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHh-----HHHHHHHHHHHHHHHH
Confidence 6789999999999444432 3331111111 11 2334444444442 3446778888999999
Q ss_pred HHHHHhhhc-CCccccC-----CceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCC-CCCCceEEEEEec
Q 042816 67 KFVAGLRQL-GIECAKS-----NGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCH-CIEPGWFSFSFTL 139 (163)
Q Consensus 67 ~l~~~l~~~-g~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~-~~~~~~iRi~~~~ 139 (163)
++.+.|+++ ++++..| ..+++ .+.++... ....+..++.+.|.+ .||.+....... ..+.+++|++++.
T Consensus 338 ~l~~~L~~~~~~~~~~~~~~~~~~~~v-~f~~~~~~--~~~~~~~~l~~~L~~-~Gi~v~~~~~~~~~~~~~~lRis~~~ 413 (452)
T 2dgk_A 338 YLADEIAKLGPYEFICTGRPDEGIPAV-CFKLKDGE--DPGYTLYDLSERLRL-RGWQVPAFTLGGEATDIVVMRIMCRR 413 (452)
T ss_dssp HHHHHHHTTSSEEEEEECCTTTBSSEE-EEEECTTC--CCSCCHHHHHHHHHH-TTCBCCEEECSTTCTTCEEEEEECCT
T ss_pred HHHHHHHhCCCeEEecCCCCCCCeEEE-EEEecCcc--cccCCHHHHHHHHHh-cCCeeeeeeCCcccCCeEEEEEEecC
Confidence 999999998 6877643 44544 34554310 000134788888876 798654321111 1125699999985
Q ss_pred -CChhHHHHHHHHHHHHHHHhhhc
Q 042816 140 -LTEKDIHVVMERIRRISQTCKSH 162 (163)
Q Consensus 140 -~~~~~l~~~~~~l~~~~~~~~~~ 162 (163)
.+.++++..++.|.+++++++..
T Consensus 414 ~~t~e~id~li~~l~~~~~~~~~~ 437 (452)
T 2dgk_A 414 GFEMDFAELLLEDYKASLKYLSDH 437 (452)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhC
Confidence 25789999999999988876653
No 189
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=98.64 E-value=3.4e-07 Score=67.75 Aligned_cols=44 Identities=7% Similarity=-0.084 Sum_probs=33.2
Q ss_pred CCCCCcee-EEEEEecCH-HHHHHHHHhhcc-c--CCChHHHHHHHHhcC
Q 042816 1 DLSLPGFR-ISVIYSYNN-SVLAAAKKLARF-S--SVSAPSQNLLVSMLS 45 (163)
Q Consensus 1 ~~~~~G~R-iG~~i~~~~-~~~~~~~~~~~~-~--~~s~~~q~~~~~~l~ 45 (163)
.||.||.| +||+++ ++ ++++.+...... + +.+++.|.++...++
T Consensus 146 ~~~~~~~r~~G~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 194 (331)
T 1pff_A 146 YINGHTDVVAGLVCS-RADIIAKVKSQGIKDITGAIISPHDAWLITRGTL 194 (331)
T ss_dssp TTSSSSSCCCEEEEE-CHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHH
T ss_pred ccCCCCCceEEEEEe-CcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcc
Confidence 37899999 899999 77 999988877655 3 467777776655554
No 190
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=98.61 E-value=1.2e-06 Score=65.67 Aligned_cols=139 Identities=6% Similarity=-0.057 Sum_probs=89.6
Q ss_pred EEEEEe-cCHHHHHHHHHhhcc--------------c----CCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Q 042816 9 ISVIYS-YNNSVLAAAKKLARF--------------S----SVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFV 69 (163)
Q Consensus 9 iG~~i~-~~~~~~~~~~~~~~~--------------~----~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 69 (163)
+|++++ +++++++.+...... . ..+.+...++... .+++++..+.++++++++.
T Consensus 189 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~-------~~~~~~~~~~~~~~~~~l~ 261 (375)
T 2fnu_A 189 EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQ-------LKKAPFLMQKREEAALTYD 261 (375)
T ss_dssp SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHH-------HTTHHHHHHHHHHHHHHHH
T ss_pred CceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHH
Confidence 788887 358888888765421 1 1222222222111 1234567777888899999
Q ss_pred HHhhhc-CCccccC----Cc-eeEEEeecCCcccCCChh-hHHHHHHHHHHhcCeEEcCCCC-------CC-------CC
Q 042816 70 AGLRQL-GIECAKS----NG-GFYCWADMSGLISSYSEK-GELELWDKLLNVAKVNVTPGSS-------CH-------CI 128 (163)
Q Consensus 70 ~~l~~~-g~~~~~~----~~-g~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~gi~v~pg~~-------f~-------~~ 128 (163)
+.|+++ |+++..+ .+ ++++|+.++... . +..++.+.|.+ +||.+.++.. |+ .+
T Consensus 262 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~L~~-~gi~v~~~~~p~~~~~~~~~~~~~~~~~ 335 (375)
T 2fnu_A 262 RIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKF-----FTCKKLILESLHK-RGILAQVHYKPIYQYQLYQQLFNTAPLK 335 (375)
T ss_dssp HHHTTCSSEEESGGGCSSCCCCSCEEEEECGGG-----GGGHHHHHHHHHH-TTEECBCCCCCGGGSHHHHHHHCCCCCH
T ss_pred HHhhcCCCccccCCCCCCCcceEEEEEEeCccc-----cchHHHHHHHHHH-CCCCccccccccccchhhhcCCCccCCh
Confidence 999988 7777655 23 345577776420 1 46788888865 8999984211 11 00
Q ss_pred -----CCceEEEEEec-CChhHHHHHHHHHHHHHHHhh
Q 042816 129 -----EPGWFSFSFTL-LTEKDIHVVMERIRRISQTCK 160 (163)
Q Consensus 129 -----~~~~iRi~~~~-~~~~~l~~~~~~l~~~~~~~~ 160 (163)
.++++||++.. .+.++++.+++.|.+++++++
T Consensus 336 ~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~~ 373 (375)
T 2fnu_A 336 SAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESFK 373 (375)
T ss_dssp HHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 12789999974 378999999999999887764
No 191
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=98.58 E-value=1.4e-07 Score=71.50 Aligned_cols=141 Identities=12% Similarity=0.063 Sum_probs=87.7
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhcc----------------cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLARF----------------SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLY 65 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~~----------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 65 (163)
.+++|.+.||++++++++.+.+...... +..+.+...+ ..... +.+++..+..+++.
T Consensus 206 K~l~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~--~~~~~-----~~~~~~~~~~~~~~ 278 (391)
T 3dr4_A 206 AIITTGEGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAI--GLAQL-----ERVDEHLAARERVV 278 (391)
T ss_dssp SSSCCBSCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHH--HHHHH-----HTHHHHHHHHHHHH
T ss_pred CcCCcCCeEEEEECCHHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHH--HHHHH-----HHHHHHHHHHHHHH
Confidence 4567788999999667788877765532 1122222222 22111 22344556666677
Q ss_pred HHHHHHhhhcCCccccC------Ccee-EEEeecCC--cccCCChhhHHHHHHHHHHhcCeEEcCCCCCC---C------
Q 042816 66 VKFVAGLRQLGIECAKS------NGGF-YCWADMSG--LISSYSEKGELELWDKLLNVAKVNVTPGSSCH---C------ 127 (163)
Q Consensus 66 ~~l~~~l~~~g~~~~~~------~~g~-~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~---~------ 127 (163)
+++.+.|++.|+++..+ ..++ .+++.++. .. +..++.+.|.+ +||.+.+|..-. .
T Consensus 279 ~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~l~~~L~~-~GI~v~~~~~p~~~~~~~~~~~ 351 (391)
T 3dr4_A 279 GWYEQKLARLGNRVTKPHVALTGRHVFWMYTVRLGEGLST------TRDQVIKDLDA-LGIESRPVFHPMHIMPPYAHLA 351 (391)
T ss_dssp HHHHHHHGGGTTSEECCCCCTTSCCCCSSEEEEECSSCSS------CHHHHHHHHHH-TTCCCEECCCCGGGSGGGGGGC
T ss_pred HHHHHHhhcCCccccCcCCCCCCcceeEEEEEEECCccch------hHHHHHHHHHH-CCCceeecCCccccChhhhhcC
Confidence 77888887777766544 2333 34666664 22 57889998876 799999875110 0
Q ss_pred ---------CCCceEEEEEec-CChhHHHHHHHHHHHHH
Q 042816 128 ---------IEPGWFSFSFTL-LTEKDIHVVMERIRRIS 156 (163)
Q Consensus 128 ---------~~~~~iRi~~~~-~~~~~l~~~~~~l~~~~ 156 (163)
...+.+|+++.. .++++++..++.|.+++
T Consensus 352 ~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 352 TDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp CTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred cCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 014578998864 48889998888887653
No 192
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=98.55 E-value=2.9e-06 Score=64.53 Aligned_cols=136 Identities=15% Similarity=0.184 Sum_probs=75.7
Q ss_pred CCCCceeE-EEEEecCHHHHH-HHHHhhcc---cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-
Q 042816 2 LSLPGFRI-SVIYSYNNSVLA-AAKKLARF---SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL- 75 (163)
Q Consensus 2 ~~~~G~Ri-G~~i~~~~~~~~-~~~~~~~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~- 75 (163)
||.||.|+ ||+++ ++++++ .+...... .+.+++.+.++...++.- ... .+...++.+.+.+.|+++
T Consensus 213 ~~~~~~~~~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~----~~~~~~~~~~l~~~L~~~~ 284 (398)
T 1gc0_A 213 LSGHGDITAGIVVG-SQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKTL---NLR----MDRHCANAQVLAEFLARQP 284 (398)
T ss_dssp TTCSSSCCCEEEEE-CHHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTTH---HHH----HHHHHHHHHHHHHHHHTCT
T ss_pred cCCCCCCeEEEEEE-ChHHHHHHHHHHhhccCCCCCCHHHHHHHHhccchH---HHH----HHHHHHHHHHHHHHHhcCC
Confidence 78899998 99999 777665 45544433 346777777777777653 233 334444555566666553
Q ss_pred --------------CCcccc----CCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcC---CCCC---------
Q 042816 76 --------------GIECAK----SNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTP---GSSC--------- 125 (163)
Q Consensus 76 --------------g~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~p---g~~f--------- 125 (163)
++++.. ..++++.+ +++. +..+ ...++++.++.+.. |..+
T Consensus 285 ~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~-~l~~--------~~~~-~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~ 354 (398)
T 1gc0_A 285 QVELIHYPGLASFPQYTLARQQMSQPGGMIAF-ELKG--------GIGA-GRRFMNALQLFSRAVSLGDAESLAQHPASM 354 (398)
T ss_dssp TEEEEEEC----------------CCTTEEEE-EETT--------HHHH-HHHHHHHCSSSEECSCCSCSSCEEECGGGT
T ss_pred CeeEEECCCCCCCcCHHHHHhhCCCCceEEEE-EECC--------CHHH-HHHHHHhCCCceeccCCCCcceeeeccccc
Confidence 122222 24555444 6653 2233 33455557887765 3221
Q ss_pred ---C---------CCCCceEEEEEecCChhHHHHHHHHHHHHHHH
Q 042816 126 ---H---------CIEPGWFSFSFTLLTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 126 ---~---------~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~ 158 (163)
. ...++.+|||++. ++.++.++.+.+++++
T Consensus 355 ~~~~~~~~~~~~~g~~~~~iRis~g~---~~~~~~i~~l~~al~~ 396 (398)
T 1gc0_A 355 THSSYTPEERAHYGISEGLVRLSVGL---EDIDDLLADVQQALKA 396 (398)
T ss_dssp TTSSSCHHHHHHTTCCTTEEEEECCS---SCHHHHHHHHHHHHHH
T ss_pred ccccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHHHh
Confidence 0 0125899999986 3445555555555543
No 193
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=98.55 E-value=1.5e-06 Score=66.16 Aligned_cols=139 Identities=10% Similarity=-0.006 Sum_probs=89.4
Q ss_pred CCCCc-eeEEEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CC
Q 042816 2 LSLPG-FRISVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL-GI 77 (163)
Q Consensus 2 ~~~~G-~RiG~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~ 77 (163)
+|.+| +|+||++++++++.+.+...... .+.+++.+.++...++.- .. ..+...++.+.+.+.|+++ ++
T Consensus 214 lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~l---~~----~~~~~~~~~~~l~~~L~~~~~v 286 (392)
T 3qhx_A 214 IGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAYLTMRGLKTL---VL----RMQRHSENAAAVAEFLAEHPAI 286 (392)
T ss_dssp TTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTH---HH----HHHHHHHHHHHHHHHHHTCTTE
T ss_pred cCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhHH---HH----HHHHHHHHHHHHHHHHhcCCCc
Confidence 56666 89999999447888888777653 467777777777777653 22 2344455666777777766 33
Q ss_pred c-cccC----------------CceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCC-------------
Q 042816 78 E-CAKS----------------NGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHC------------- 127 (163)
Q Consensus 78 ~-~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~------------- 127 (163)
. +..| ..|..+++.++... .....+...|. ..++.+..|..+..
T Consensus 287 ~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~-----~~~~~~~~~l~-~~~~~~s~G~~~sl~~~~~~~~~~~~~ 360 (392)
T 3qhx_A 287 STVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGR-----TAAEQLCAKTN-IFILAESLGSVESLIEHPSAMTHASTA 360 (392)
T ss_dssp EEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCH-----HHHHHHHHHCS-SSEECSCCCCSSCEEECGGGTSCGGGB
T ss_pred ceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcH-----HHHHHHHHhCC-CceECCCCCCCCceeeCcccccccccC
Confidence 2 2111 12556788887521 25567776554 36788777765321
Q ss_pred -----CCCceEEEEEecCChhHHHHHHHHHHHHH
Q 042816 128 -----IEPGWFSFSFTLLTEKDIHVVMERIRRIS 156 (163)
Q Consensus 128 -----~~~~~iRi~~~~~~~~~l~~~~~~l~~~~ 156 (163)
..++.+|||++. ++.++.++.+.+++
T Consensus 361 ~~~~g~~~~~iRlSvg~---e~~~~~i~~l~~al 391 (392)
T 3qhx_A 361 GSQLEVPDDLVRLSVGI---EDVADLLDDLKQAL 391 (392)
T ss_dssp TTBCCCCTTEEEEECCS---SCHHHHHHHHHHHH
T ss_pred HHHcCCCCCeEEEEecc---CCHHHHHHHHHHHh
Confidence 136789999986 46666777776654
No 194
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=98.53 E-value=1.5e-06 Score=66.77 Aligned_cols=142 Identities=16% Similarity=0.168 Sum_probs=85.8
Q ss_pred CCCCc-eeEEEEEecCHHHHH-HHHHhhcc--cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-C
Q 042816 2 LSLPG-FRISVIYSYNNSVLA-AAKKLARF--SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL-G 76 (163)
Q Consensus 2 ~~~~G-~RiG~~i~~~~~~~~-~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g 76 (163)
||.+| +|+||+++ +++.+. .+...... .+.++....++...++. +....+...++.+.+.+.|+++ +
T Consensus 229 l~~~G~~~~G~vv~-~~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~~-------l~~r~~~~~~~a~~l~~~L~~~p~ 300 (414)
T 3ndn_A 229 IDGQGRVLGGAILG-DREYIDGPVQKLMRHTGPAMSAFNAWVLLKGLET-------LAIRVQHSNASAQRIAEFLNGHPS 300 (414)
T ss_dssp TTCSSCCCCEEEEE-CHHHHTTHHHHHHHHHCCCCCHHHHHHHHHHGGG-------HHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred ccCCCCceEEEEEE-CHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhcCCC
Confidence 67778 99999999 777766 66654443 23444444444443332 2334445567778888888876 4
Q ss_pred Cc-cccCC----------------ceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCC------------
Q 042816 77 IE-CAKSN----------------GGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHC------------ 127 (163)
Q Consensus 77 ~~-~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~------------ 127 (163)
+. +..|. .|..+|++++.... ....+...|.+.|.. .++.+.+|..+..
T Consensus 301 v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~-~~~~~~~~~~~~l~~-~~~~~s~G~~~sl~~~p~~~~~~~~ 378 (414)
T 3ndn_A 301 VRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPED-VAKQRAFEVLDKMRL-IDISNNLGDAKSLVTHPATTTHRAM 378 (414)
T ss_dssp EEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGG-GHHHHHHHHHHHCSS-SEECSCCSCSSCEEECGGGTTTCTT
T ss_pred EeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCcc-ccHHHHHHHHHhCcc-ceEcCCCCCCCceeeCccccccccC
Confidence 32 22221 57789999974200 001245677776643 6778877765431
Q ss_pred ---------CCCceEEEEEecCChhHHHHHHHHHHHHH
Q 042816 128 ---------IEPGWFSFSFTLLTEKDIHVVMERIRRIS 156 (163)
Q Consensus 128 ---------~~~~~iRi~~~~~~~~~l~~~~~~l~~~~ 156 (163)
..++.+|||++. |+.+..++.|.+++
T Consensus 379 ~~~~~~~~g~~~~~iRlsvG~---e~~~dli~dl~~al 413 (414)
T 3ndn_A 379 GPEGRAAIGLGDGVVRISVGL---EDTDDLIADIDRAL 413 (414)
T ss_dssp HHHHHHHTTCCTTEEEEECCS---SCHHHHHHHHHHHH
T ss_pred CHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHhh
Confidence 236899999997 45566666666554
No 195
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=98.53 E-value=3.2e-07 Score=72.15 Aligned_cols=151 Identities=12% Similarity=-0.007 Sum_probs=93.7
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc-cc-----------CC---ChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR-FS-----------SV---SAPSQNLLVSMLSDTKFVQKFININRERLRRLYV 66 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~-~~-----------~~---s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 66 (163)
|++++.++||+++.+++.+........ +. +. ..+.|.++...+.. +-+....+...++.+
T Consensus 278 ~l~~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~-----~g~~~~~~~~~~~a~ 352 (502)
T 3hbx_A 278 YGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGH-----EGYRNVMENCRENMI 352 (502)
T ss_dssp TTCCCSSCEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHH
T ss_pred ccCCCCCeEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHH
Confidence 567888999988855554322211111 10 11 22334333333332 234666777777888
Q ss_pred HHHHHhhhc-CCccccC-CceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCC-CCCceEEEEEec-CCh
Q 042816 67 KFVAGLRQL-GIECAKS-NGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHC-IEPGWFSFSFTL-LTE 142 (163)
Q Consensus 67 ~l~~~l~~~-g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~-~~~~~iRi~~~~-~~~ 142 (163)
++.+.|+++ ++++..+ ....++.+.++... . .+..++.+.|.+ .||.+........ .+..++||++.. .+.
T Consensus 353 ~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~---~-~~~~~l~~~L~~-~Gi~v~~~~~p~~~~~~~~lRisv~~~~t~ 427 (502)
T 3hbx_A 353 VLREGLEKTERFNIVSKDEGVPLVAFSLKDSS---C-HTEFEISDMLRR-YGWIVPAYTMPPNAQHITVLRVVIREDFSR 427 (502)
T ss_dssp HHHHHHHTTTCEEECSCSSSSSEEEEEESSCS---S-CCHHHHHHHHHT-TTCBCCEEECCTTCTTCEEEEEECCTTCCH
T ss_pred HHHHHHHhCCCEEEEeCCCCceEEEEEecCCC---c-CCHHHHHHHHHh-CCcEEeeccCCcccCCceEEEEEeCCCCCH
Confidence 999999998 4887765 33334555665310 0 155688988876 8998754332221 235799999974 477
Q ss_pred hHHHHHHHHHHHHHHHhhhc
Q 042816 143 KDIHVVMERIRRISQTCKSH 162 (163)
Q Consensus 143 ~~l~~~~~~l~~~~~~~~~~ 162 (163)
++++..++.|.++++.++.+
T Consensus 428 edid~li~~L~~~l~~l~~~ 447 (502)
T 3hbx_A 428 TLAERLVIDIEKVMRELDEL 447 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 89999999999999887664
No 196
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=98.50 E-value=3.2e-06 Score=64.16 Aligned_cols=148 Identities=10% Similarity=0.014 Sum_probs=87.5
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhccc--C--------------CChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLARFS--S--------------VSAPSQNLLVSMLSDTKFVQKFININRERLRRLY 65 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~~~--~--------------~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 65 (163)
.+++|.|+||++++++++++.+....... . ++.+...++...++ ++++..+.+++++
T Consensus 184 K~l~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~-------~l~~~~~~~~~~~ 256 (394)
T 1o69_A 184 KIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQME-------VLEQRVLKKREIY 256 (394)
T ss_dssp SSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHT-------THHHHHHHHHHHH
T ss_pred ccCCCCCceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHHHH-------HHHHHHHHHHHHH
Confidence 35678899999994489998887765432 1 11122222211122 2445667778888
Q ss_pred HHHHHHhhhcCCccccCC----cee-EEEeecCCcc---------------cCCChhhHHHHHHHHHHhcCeEEcCCCCC
Q 042816 66 VKFVAGLRQLGIECAKSN----GGF-YCWADMSGLI---------------SSYSEKGELELWDKLLNVAKVNVTPGSSC 125 (163)
Q Consensus 66 ~~l~~~l~~~g~~~~~~~----~g~-~~~~~~~~~~---------------~~~~~~~~~~~~~~l~~~~gi~v~pg~~f 125 (163)
+++.+.|++. +++.++. +++ .+++.++... +.....+..++.+.|.+ +||.+++|...
T Consensus 257 ~~l~~~L~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~gI~v~~~~~~ 334 (394)
T 1o69_A 257 EWYKEFLGEY-FSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKN-KQIETRPLWKA 334 (394)
T ss_dssp HHHHHHHTTT-EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHH-TTCCCBCCCCC
T ss_pred HHHHHHhccc-ccccCCCCCCcceeEEEEEEecchhhccccccccccccccccccccCHHHHHHHHHH-cCCcccccCCc
Confidence 8888888876 5554442 344 3566666310 00000156788888876 89999998532
Q ss_pred CC--CC-C---------------ceEEEEE-ecCChhHHHHHHHHHHHHHHH
Q 042816 126 HC--IE-P---------------GWFSFSF-TLLTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 126 ~~--~~-~---------------~~iRi~~-~~~~~~~l~~~~~~l~~~~~~ 158 (163)
.. +. . ..+|+.. ...++++++..++.|++++..
T Consensus 335 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l~~~~~~ 386 (394)
T 1o69_A 335 MHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIKA 386 (394)
T ss_dssp GGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC-
T ss_pred cccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHHHHHHhc
Confidence 10 00 0 2333333 225889999999999988764
No 197
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=98.47 E-value=2.5e-06 Score=66.52 Aligned_cols=144 Identities=15% Similarity=0.129 Sum_probs=91.1
Q ss_pred CCCCceeEEEEEecCHHH-HHHHHHhhcc--------------------c--CCChHHHHHHHHhcCChHHHHHHHHHHH
Q 042816 2 LSLPGFRISVIYSYNNSV-LAAAKKLARF--------------------S--SVSAPSQNLLVSMLSDTKFVQKFININR 58 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~-~~~~~~~~~~--------------------~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~ 58 (163)
+++| +++||+++.++.. .+.+.....+ . ....+.+.++...+ + .+.+++..
T Consensus 305 ~~~p-~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~--g---~~g~~~~~ 378 (486)
T 1js3_A 305 LLVN-FDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMY--G---VKGLQAYI 378 (486)
T ss_dssp SSCC-SSCEEEEESCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHH--H---HHHHHHHH
T ss_pred cCCC-cceEEEEEeCHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHH--h---HHHHHHHH
Confidence 3455 8999999966654 3333110000 0 12334454444444 2 34567778
Q ss_pred HHHHHHHHHHHHHhhhc-CCccc-cCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEE
Q 042816 59 ERLRRLYVKFVAGLRQL-GIECA-KSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFS 136 (163)
Q Consensus 59 ~~~~~~~~~l~~~l~~~-g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~ 136 (163)
+.+.++++++.+.|++. |+++. +|..+++.| .++.. .....++.+.|.+ .|+.+.++..|. +.+++|++
T Consensus 379 ~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f-~~~~~-----~~~~~~l~~~L~~-~g~~~~~~~~~~--~~~~lRi~ 449 (486)
T 1js3_A 379 RKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCF-RLKGS-----DGLNEALLERINS-ARKIHLVPCRLR--GQFVLRFA 449 (486)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEECSCCCSSEEEE-EESSC-----HHHHHHHHHHHHH-HTSCBCEEEEET--TEEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCeEEeCCCceeEEEE-EecCh-----HHHHHHHHHHHHh-cCCEEEEEEEEC--CEEEEEEE
Confidence 88888999999999988 88875 467777665 44321 0125788888877 565443333333 36899999
Q ss_pred Eec--CChhHHHHHHHHHHHHHHHhh
Q 042816 137 FTL--LTEKDIHVVMERIRRISQTCK 160 (163)
Q Consensus 137 ~~~--~~~~~l~~~~~~l~~~~~~~~ 160 (163)
+.. .+.++++.+++.|.++++++.
T Consensus 450 ~~~~~~t~~di~~~~~~l~~~~~~~~ 475 (486)
T 1js3_A 450 ICSRKVESGHVRLAWEHIRGLAAELL 475 (486)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 864 267899999999999887664
No 198
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=98.46 E-value=1.5e-06 Score=65.96 Aligned_cols=135 Identities=17% Similarity=0.127 Sum_probs=80.3
Q ss_pred CCCCceeE-EEEEecCH-HHHHHHHHhhcc--cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc--
Q 042816 2 LSLPGFRI-SVIYSYNN-SVLAAAKKLARF--SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL-- 75 (163)
Q Consensus 2 ~~~~G~Ri-G~~i~~~~-~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-- 75 (163)
++.||.|+ ||+++ ++ ++++.+...... .+.+++.+.++...++.- ...+++. .++...+.+.|+++
T Consensus 207 ~~~~~~~~~G~v~~-~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~l---~~r~~~~----~~~~~~l~~~l~~~~~ 278 (389)
T 3acz_A 207 INGHGDVIGGVSSA-KTAEDIATIKFYRKDAGSLMAPMDAFLCARGMKTL---PIRMQIH----MENGLKVAKFLEQHEK 278 (389)
T ss_dssp TTCSSCCCCEEEEE-SSHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTH---HHHHHHH----HHHHHHHHHHHHHCTT
T ss_pred ccCCCCceeEEEEE-CcHHHHHHHHHHHHhcCCCCCHHHHHHHHcCccHH---HHHHHHH----HHHHHHHHHHHHcCCC
Confidence 78899998 99999 66 898888776653 345666777666777653 2223333 33444455555443
Q ss_pred -------------CCcccc----CCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcC---C------CCCCC--
Q 042816 76 -------------GIECAK----SNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTP---G------SSCHC-- 127 (163)
Q Consensus 76 -------------g~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~p---g------~~f~~-- 127 (163)
++.+.. ..|+ ++.+.++. ..+..+ ++++.|+.+.+ | ..+..
T Consensus 279 v~~~~~~~L~~~~~~~~~~~~~~g~g~-~~~~~l~~---------~~~~~~-~l~~~~i~~~~~s~G~~~sl~~~~~~~~ 347 (389)
T 3acz_A 279 IVKVNHPGLESFPGHDIAKKQMTGYGS-TFLFEMKS---------FEAAKK-LMEHLKVCTLAVSLGCVDTLIEHPASMT 347 (389)
T ss_dssp EEEEECTTSTTSTTHHHHHHHCSSCCS-EEEEEESS---------HHHHHH-HHTTCSSSEEBSCCCCSSCEEECTTTTT
T ss_pred eeEEECCCCCCCccHHHHHhhCCCCCe-EEEEEECC---------HHHHHH-HHHhCCCcEECcCCCCcccEeeCCcccc
Confidence 122211 1244 44456652 233444 44558888776 3 22210
Q ss_pred -------------CCCceEEEEEecCChhHHHHHHHHHHHHHHH
Q 042816 128 -------------IEPGWFSFSFTLLTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 128 -------------~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~ 158 (163)
..++.+|+|++. ++.++.++.|.+++++
T Consensus 348 ~~~~~~~~~~~~g~~~~~iRlsvg~---~~~~~li~~l~~al~~ 388 (389)
T 3acz_A 348 HAAVPENIMRKQGITPELVRISVGI---ENVDDIIADLKQALEL 388 (389)
T ss_dssp TSSSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHTC
T ss_pred cccCCHHHHHhcCCCcCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 125899999986 4777888888877653
No 199
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=98.43 E-value=4.9e-06 Score=64.56 Aligned_cols=140 Identities=11% Similarity=0.125 Sum_probs=85.9
Q ss_pred CCCCc-eeEEEEEecCHHHHHHHHHhhcccC--CChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CC
Q 042816 2 LSLPG-FRISVIYSYNNSVLAAAKKLARFSS--VSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL-GI 77 (163)
Q Consensus 2 ~~~~G-~RiG~~i~~~~~~~~~~~~~~~~~~--~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~ 77 (163)
+|..| +++||+++ ++++++.+.......+ .+++...++...++. +....+.+.++.+.+.+.|+++ ++
T Consensus 263 ~gg~gd~~~G~l~~-~~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~~-------l~~r~~~~~~~a~~l~~~L~~~p~v 334 (445)
T 1qgn_A 263 LGGHNDVLAGCISG-PLKLVSEIRNLHHILGGALNPNAAYLIIRGMKT-------LHLRVQQQNSTALRMAEILEAHPKV 334 (445)
T ss_dssp TTCSSSCCCEEEEE-CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHGGG-------HHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred ccccccceEEEEEE-CHHHHHHHHHHHHHhCCCCCHHHHHHHHHhHHH-------HHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 34444 57999999 8999888876655332 344444444444433 2233344556678888888887 54
Q ss_pred -ccccC----------------CceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCC-------------
Q 042816 78 -ECAKS----------------NGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHC------------- 127 (163)
Q Consensus 78 -~~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~------------- 127 (163)
.+..| ..|..+++.++... .+...+.+.|. ..++.+..|..+..
T Consensus 335 ~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~-----~~~~~~l~~l~-~~~i~~s~G~~~sl~~~p~~~~h~~~~ 408 (445)
T 1qgn_A 335 RHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDL-----LTTAKFVDALK-IPYIAPSFGGCESIVDQPAIMSYWDLS 408 (445)
T ss_dssp EEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCH-----HHHHHHHHHCS-SSEECSCCCSSSCEEECHHHHHSTTSC
T ss_pred eEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCH-----HHHHHHHHhCC-CceEeccCCCCceeeecccccccccCC
Confidence 33333 13456777876421 13455555442 24777777765421
Q ss_pred --------CCCceEEEEEecCChhHHHHHHHHHHHHHHH
Q 042816 128 --------IEPGWFSFSFTLLTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 128 --------~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~ 158 (163)
..++.+|+|++. |+++..++.|.+++++
T Consensus 409 ~~~~~~~g~~~~~iRlSvG~---Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 409 QSDRAKYGIMDNLVRFSFGV---EDFDDLKADILQALDS 444 (445)
T ss_dssp HHHHHTTTCCSSEEEEECCS---SCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 125899999995 5788888888888764
No 200
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=98.39 E-value=1.3e-05 Score=61.08 Aligned_cols=141 Identities=11% Similarity=0.031 Sum_probs=79.1
Q ss_pred CCCCceeE-EEEEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcC--
Q 042816 2 LSLPGFRI-SVIYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLG-- 76 (163)
Q Consensus 2 ~~~~G~Ri-G~~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-- 76 (163)
||.+|+|+ ||+++.++++++.+...... .++++..+.++...++.- . ...+...++...+.+.|.++.
T Consensus 205 ~g~~G~rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~~---~----~~~~~~~~~~~~l~~~L~~~~~~ 277 (393)
T 1n8p_A 205 INGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLKTL---H----LRVRQAALSANKIAEFLAADKEN 277 (393)
T ss_dssp TTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTH---H----HHHHHHHHHHHHHHHHHTSCTTT
T ss_pred ccCCCCceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccchH---H----HHHHHHHHHHHHHHHHHHhCCCC
Confidence 78899999 99998448898888776553 345556665555555542 2 233334455666666666552
Q ss_pred Cc-cccC---------------Cc---eeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCC----------CCCC-
Q 042816 77 IE-CAKS---------------NG---GFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPG----------SSCH- 126 (163)
Q Consensus 77 ~~-~~~~---------------~~---g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg----------~~f~- 126 (163)
+. +..| .+ |..+++.++.. ..+...+...| +..++.+..| ..+.
T Consensus 278 l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~-----~~~~~~~l~~l-~~~~~~~s~G~~~s~~~~p~~~~h~ 351 (393)
T 1n8p_A 278 VVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGG-----AEAASKFASST-RLFTLAESLGGIESLLEVPAVMTHG 351 (393)
T ss_dssp EEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSC-----HHHHHHHHHHC-SSSEECSCCCCSSCEEECTTTTTSC
T ss_pred ceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCc-----HHHHHHHHhhC-CcceECCCCCCCcceeecccccccc
Confidence 21 1111 12 55688888742 02445555544 2245554333 2221
Q ss_pred ----------CCCCceEEEEEecCChhHHHHHHHHHHHHHHH
Q 042816 127 ----------CIEPGWFSFSFTLLTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 127 ----------~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~ 158 (163)
...++.+|+|++. ++.++.++.+.+++++
T Consensus 352 ~~~~~~~~~~g~~~~~iRlS~g~---~~~~~~i~~l~~al~~ 390 (393)
T 1n8p_A 352 GIPKEAREASGVFDDLVRISVGI---EDTDDLLEDIKQALKQ 390 (393)
T ss_dssp SSCTTTTTTTSCCTTEEEEECCS---SCHHHHHHHHHHHHHH
T ss_pred ccCHHHHHhcCCCCCeEEEEEcc---CCHHHHHHHHHHHHHH
Confidence 0125899999997 3344445555555544
No 201
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=98.38 E-value=1.1e-06 Score=68.62 Aligned_cols=111 Identities=15% Similarity=0.118 Sum_probs=74.9
Q ss_pred cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc--C----CccccCCceeEEEeecCCcccCCChhh
Q 042816 30 SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL--G----IECAKSNGGFYCWADMSGLISSYSEKG 103 (163)
Q Consensus 30 ~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--g----~~~~~~~~g~~~~~~~~~~~~~~~~~~ 103 (163)
++.++++|.++...|+.- .+ +...+.++++.+++.+.|+++ + +...++.|. +++++++.. .+
T Consensus 354 ~~~~~~~~aaa~aal~~~---~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~g~-~~~~~~~~~------~~ 421 (472)
T 1ohv_A 354 WLGDPSKNLLLAEVINII---KR--EDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGT-FCSFDTPDE------SI 421 (472)
T ss_dssp SSSCHHHHHHHHHHHHHH---HH--TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEETT-EEEEECSSH------HH
T ss_pred cCccHHHHHHHHHHHHHH---Hh--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCCce-EEEEEeCCh------hH
Confidence 356888888777776531 11 234455556666666666553 1 333455544 556677642 25
Q ss_pred HHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CChhHHHHHHHHHHHHHHHh
Q 042816 104 ELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LTEKDIHVVMERIRRISQTC 159 (163)
Q Consensus 104 ~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~~l~~~~~~l~~~~~~~ 159 (163)
...+++.|++ +||.+.|+ +.+++|++++. ++++++++++++|.+++.++
T Consensus 422 ~~~~~~~l~~-~Gv~~~~~------g~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 471 (472)
T 1ohv_A 422 RNKLISIARN-KGVMLGGC------GDKSIRFRPTLVFRDHHAHLFLNIFSDILADF 471 (472)
T ss_dssp HHHHHHHHHH-TTEECEEE------TTTEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHH-CCeEEecC------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 6789998887 89999984 15799997763 48899999999999998765
No 202
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=98.37 E-value=1.5e-06 Score=68.10 Aligned_cols=102 Identities=12% Similarity=0.035 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhc-CCccc-cCCceeEEEeecCCcccCCCh-hhHHHHHHHHHHhcCeEEcCCCCCCCC
Q 042816 52 KFININRERLRRLYVKFVAGLRQL-GIECA-KSNGGFYCWADMSGLISSYSE-KGELELWDKLLNVAKVNVTPGSSCHCI 128 (163)
Q Consensus 52 ~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~-~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~pg~~f~~~ 128 (163)
+.+++..+...++.+++.+.|+++ ++++. +|.++++ ++++...- ... .-..++.+.|.+ .|+.+.++..+.
T Consensus 390 ~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v-~f~~~~~~--~~~~~l~~~l~~~l~~-~G~~~~~~~~~~-- 463 (497)
T 2qma_A 390 KALGDMYDHLLAQTLEVADMIRTNDQFELLAEPSLSTV-LFRATHET--ADLDELNKALRLEALT-RGIAVLGETIVD-- 463 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCCSSSEE-EEEECCSS--SCHHHHHHHHHHHHHH-HTSCBCEEEEET--
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcCCCceEE-EEEEcCCc--cCHHHHHHHHHHHHHh-CCCEEEEeeEEC--
Confidence 345667777888999999999987 88774 5666644 44554310 000 013456677766 798887655443
Q ss_pred CCceEEEEEe--cCChhHHHHHHHHHHHHHHHh
Q 042816 129 EPGWFSFSFT--LLTEKDIHVVMERIRRISQTC 159 (163)
Q Consensus 129 ~~~~iRi~~~--~~~~~~l~~~~~~l~~~~~~~ 159 (163)
+.+++|+++. ..++++++.+++.|.++++++
T Consensus 464 g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 496 (497)
T 2qma_A 464 GKTALKFTILNPCLTTSDFESLLSKINMLAVEL 496 (497)
T ss_dssp TEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 2579999984 248899999999999988764
No 203
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=98.37 E-value=5.4e-06 Score=65.02 Aligned_cols=149 Identities=13% Similarity=0.133 Sum_probs=92.2
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhc-cc-C---------------------CChHHHHHHHHhcCChHHHHHHHHHHH
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLAR-FS-S---------------------VSAPSQNLLVSMLSDTKFVQKFININR 58 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~-~~-~---------------------~s~~~q~~~~~~l~~~~~~~~~~~~~~ 58 (163)
++.| .++|++++.++++.+....... +. + ...+.+.++..++. .+.+++..
T Consensus 315 ~~~p-~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg-----~~g~~~~~ 388 (504)
T 2okj_A 315 MGVL-LQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG-----TVGFENQI 388 (504)
T ss_dssp TCCC-SCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHH-----HHHHHHHH
T ss_pred cCCC-cceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhh-----HHHHHHHH
Confidence 3445 7899999955456554322211 11 0 12444545544443 23356777
Q ss_pred HHHHHHHHHHHHHhhhc-CCcccc---CCceeEEEeecCCcccC--CCh-------hhHHHHHHHHHHhcCe-EEcCCCC
Q 042816 59 ERLRRLYVKFVAGLRQL-GIECAK---SNGGFYCWADMSGLISS--YSE-------KGELELWDKLLNVAKV-NVTPGSS 124 (163)
Q Consensus 59 ~~~~~~~~~l~~~l~~~-g~~~~~---~~~g~~~~~~~~~~~~~--~~~-------~~~~~~~~~l~~~~gi-~v~pg~~ 124 (163)
+...++.+++.+.|+++ |+++.. |..++++|...|..... .+. ....++.+.|.+ .|+ .+.++ .
T Consensus 389 ~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~G~~~~~~~-~ 466 (504)
T 2okj_A 389 NKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMME-SGTTMVGYQ-P 466 (504)
T ss_dssp HHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHH-HTSCEEEEE-E
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHHHh-CCcEEEEee-E
Confidence 78888999999999988 887764 78888777555532100 000 014578888877 675 44433 2
Q ss_pred CCCCCCceEEEEEec--CChhHHHHHHHHHHHHHHHh
Q 042816 125 CHCIEPGWFSFSFTL--LTEKDIHVVMERIRRISQTC 159 (163)
Q Consensus 125 f~~~~~~~iRi~~~~--~~~~~l~~~~~~l~~~~~~~ 159 (163)
+. ..++++|++++. .+.++++.+++.|.++.+++
T Consensus 467 ~~-~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 502 (504)
T 2okj_A 467 QG-DKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 502 (504)
T ss_dssp ET-TEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC-
T ss_pred EC-CceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 32 114699999972 37889999999999887765
No 204
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=98.33 E-value=1.3e-05 Score=59.94 Aligned_cols=144 Identities=11% Similarity=0.118 Sum_probs=86.8
Q ss_pred CCCceeEEEEEecCHHHHHHHHHhhcc--------------cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHH
Q 042816 3 SLPGFRISVIYSYNNSVLAAAKKLARF--------------SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKF 68 (163)
Q Consensus 3 ~~~G~RiG~~i~~~~~~~~~~~~~~~~--------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 68 (163)
+.+|. .||++++++++.+.+...... +..+.+.+.+....+. .+++..+..+++.+.+
T Consensus 190 ~~~g~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~-------~~~~~~~~~~~~~~~l 261 (374)
T 3uwc_A 190 NVWSD-AGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLMN-------QLETITEKRRGIAHLY 261 (374)
T ss_dssp CCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHGG-------GHHHHHHHHHHHHHHH
T ss_pred Cccce-eEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHHH-------HHHHHHHHHHHHHHHH
Confidence 33354 999998667888887766531 1123333332222221 1244555666777888
Q ss_pred HHHhhhc-C-Cccc-cCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCC-------------C----
Q 042816 69 VAGLRQL-G-IECA-KSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHC-------------I---- 128 (163)
Q Consensus 69 ~~~l~~~-g-~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~-------------~---- 128 (163)
.+.|++. + +++. .+.++...|..++... .+..++.+.|.+ +||.+.++..... .
T Consensus 262 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~-~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (374)
T 3uwc_A 262 DQSFVDLSEFIDVPVRREGVYHVFHIYVLRV-----KYRDQLFQYLKD-NGIEVKIHYPIAMHLQPAAKSLGYQQGDFPM 335 (374)
T ss_dssp HHHTGGGTTTEECCCCCTTEECCCSSEEEEE-----TTHHHHHHHHHH-TTBCCBCSCSSCGGGSGGGGGGCCCTTSCHH
T ss_pred HHHhccCCCeEEeccCCCCCceeeEEEEEEc-----CCHHHHHHHHHH-CCCccccCCCCccccChhhhhcCCccCCCcc
Confidence 8888877 4 5543 2333333332222111 156788888876 8999998852110 0
Q ss_pred ----CCceEEEEEec-CChhHHHHHHHHHHHHHHHhh
Q 042816 129 ----EPGWFSFSFTL-LTEKDIHVVMERIRRISQTCK 160 (163)
Q Consensus 129 ----~~~~iRi~~~~-~~~~~l~~~~~~l~~~~~~~~ 160 (163)
..+.+|+++.. .++++++..++.|.+++++.+
T Consensus 336 ~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~~~ 372 (374)
T 3uwc_A 336 AEKHGEAVITLPAHPYLTEEEINYIIKKVREFYLEKH 372 (374)
T ss_dssp HHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHhhc
Confidence 02789998864 488999999999999987653
No 205
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=98.26 E-value=6.4e-07 Score=69.41 Aligned_cols=68 Identities=12% Similarity=0.146 Sum_probs=51.9
Q ss_pred CCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEc-CCCCCCCCCCceEEEEEec-CChhHHHHHHHHHH
Q 042816 76 GIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVT-PGSSCHCIEPGWFSFSFTL-LTEKDIHVVMERIR 153 (163)
Q Consensus 76 g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~-pg~~f~~~~~~~iRi~~~~-~~~~~l~~~~~~l~ 153 (163)
|+++..+..+.++|++++. . +..++.+.|.+ +||.+. +| .+++|++++. .+++++ .+++.|.
T Consensus 284 g~~~~~~~~~~~l~i~~~~-~------~~~~l~~~L~~-~GI~v~~~g-------~~~iRi~~~~~~t~e~i-~l~~aL~ 347 (446)
T 2x3l_A 284 GFEMLQVDDPLKLLIKYEG-F------TGHDIQNWFMN-AHIYLELAD-------DYQALAILPLWHHDDTY-LFDSLLR 347 (446)
T ss_dssp TCEEEECSSTTEEEEECTT-S------CHHHHHHHHHH-TTEEESEEC-------SSCEEEECCCCCTTCCC-CHHHHHH
T ss_pred CCEECcCCCCeEEEEEeCC-c------CHHHHHHHHHH-CCCEEEecC-------CCEEEEEeecCCCHHHH-HHHHHHH
Confidence 7777766656679999873 2 67889988877 699997 43 3689999974 366788 9999998
Q ss_pred HHHHHh
Q 042816 154 RISQTC 159 (163)
Q Consensus 154 ~~~~~~ 159 (163)
++++++
T Consensus 348 ~~~~~~ 353 (446)
T 2x3l_A 348 KIEDMI 353 (446)
T ss_dssp HHHTCC
T ss_pred HHHHhh
Confidence 887654
No 206
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=98.21 E-value=3.9e-05 Score=58.98 Aligned_cols=90 Identities=13% Similarity=0.033 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHhhhc-CCccccCC--------ceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCC---C
Q 042816 61 LRRLYVKFVAGLRQL-GIECAKSN--------GGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHC---I 128 (163)
Q Consensus 61 ~~~~~~~l~~~l~~~-g~~~~~~~--------~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~---~ 128 (163)
.+++.+++.+.|+++ |+...+.. ..|.+.++.+... +..++.+.|.+ +||.+.++..... +
T Consensus 313 ~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~L~~-~GI~v~~~~~~~~~~~p 385 (437)
T 3bb8_A 313 RKANFKYLKDALQSCADFIELPEATENSDPSWFGFPITLKEDSGV------SRIDLVKFLDE-AKVGTRLLFAGNLTRQP 385 (437)
T ss_dssp HHHHHHHHHHHGGGGTTTEECCCCCTTEECCCSSEEEEECGGGSS------CHHHHHHHHHH-TTBCCBCCTTSSGGGSG
T ss_pred HHHHHHHHHHHhhccCCccccCCCCCCCceeeEEEEEEECCcCcC------cHHHHHHHHHH-CCCceeccCCcccccCc
Confidence 356677888888887 65544311 1233335544222 56788888876 8999998754110 0
Q ss_pred ----------C---------CceEEEEEec-CChhHHHHHHHHHHHHHH
Q 042816 129 ----------E---------PGWFSFSFTL-LTEKDIHVVMERIRRISQ 157 (163)
Q Consensus 129 ----------~---------~~~iRi~~~~-~~~~~l~~~~~~l~~~~~ 157 (163)
. .+.+||++.. .+.++++..++.|.++++
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 386 YFHDVKYRVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp GGSSCCCEECSCCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHTT
T ss_pred hhhccCccccCCCcHHHHHhcCEEEecCCCCCCHHHHHHHHHHHHHHHc
Confidence 0 1248988765 478899998888887653
No 207
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=98.20 E-value=9.3e-06 Score=60.96 Aligned_cols=146 Identities=14% Similarity=0.177 Sum_probs=82.2
Q ss_pred CCc-eeEEEEEecCHHHHHHHHHhhcc--------------cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHH
Q 042816 4 LPG-FRISVIYSYNNSVLAAAKKLARF--------------SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKF 68 (163)
Q Consensus 4 ~~G-~RiG~~i~~~~~~~~~~~~~~~~--------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 68 (163)
+++ -+.|+++++++++.+.+...... +..+.+...+....+. .+++..+..++..+++
T Consensus 188 l~~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~~-------~~~~~~~~~~~~~~~~ 260 (373)
T 3frk_A 188 LGSLGDGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKLK-------YLDKWNEERRKIAQKY 260 (373)
T ss_dssp SCCSSSCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHHH-------THHHHHHHHHHHHHHH
T ss_pred cCccceeEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHHH-------HHHHHHHHHHHHHHHH
Confidence 444 45899999567788877765542 1123333333222222 2344555566677777
Q ss_pred HHHhhhcCCccc-cCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCC-------------C-----
Q 042816 69 VAGLRQLGIECA-KSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCI-------------E----- 129 (163)
Q Consensus 69 ~~~l~~~g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~-------------~----- 129 (163)
.+.|++.++.+. .+.++...|..++... .+..++.+.|.+ +||.+.++...... .
T Consensus 261 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~-~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (373)
T 3frk_A 261 IAGINNPNVIIPVEADYAKHVWYTFVIRS-----EKRDELQKYLNN-NGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAE 334 (373)
T ss_dssp HHHCCCTTEECCCCCTTEECCCSSEEEEE-----SSHHHHHHHHHH-TTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHH
T ss_pred HHHhccCceEeccCCCCCceeeEEEEEEe-----CCHHHHHHHHHH-CCCCcccCcCCccccChHHHhcCCCCCCCHHHH
Confidence 788877653332 1222322332222111 156788888876 79999976521100 0
Q ss_pred ---CceEEEEEec-CChhHHHHHHHHHHHHHHHhhhc
Q 042816 130 ---PGWFSFSFTL-LTEKDIHVVMERIRRISQTCKSH 162 (163)
Q Consensus 130 ---~~~iRi~~~~-~~~~~l~~~~~~l~~~~~~~~~~ 162 (163)
.+.+|+++.. .++++++..++.|+++..++.|+
T Consensus 335 ~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~~~~~ 371 (373)
T 3frk_A 335 KIANEILSIPIWYGMKNEEIEYVIDKINAWKLEHHHH 371 (373)
T ss_dssp HHHHHEEEECCCTTCCHHHHHHHHHHHHTCC------
T ss_pred HHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhhhccc
Confidence 2689999864 58899999999999988776654
No 208
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=98.16 E-value=6e-05 Score=56.45 Aligned_cols=142 Identities=14% Similarity=0.170 Sum_probs=81.5
Q ss_pred CCCCceeEEEEEecCHHHHHHHHHhhcc--------------cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Q 042816 2 LSLPGFRISVIYSYNNSVLAAAKKLARF--------------SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVK 67 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~~~~~~~~~~~~~~--------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 67 (163)
+|.+|. .|+++++++++.+.+...... +..+.+.+.++...++. ++...+..++..++
T Consensus 187 l~~~g~-gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~-------~~~~~~~~~~~~~~ 258 (367)
T 3nyt_A 187 LGCYGD-GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLEI-------FEEEIALRQKVAAE 258 (367)
T ss_dssp SCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHHT-------HHHHHHHHHHHHHH
T ss_pred CCCcCc-eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHHH-------HHHHHHHHHHHHHH
Confidence 455576 999999668898888775542 23455555544444432 23334445556677
Q ss_pred HHHHhhhcCCcccc-CCce---eE-EEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCC--------CC-CC-----
Q 042816 68 FVAGLRQLGIECAK-SNGG---FY-CWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSS--------CH-CI----- 128 (163)
Q Consensus 68 l~~~l~~~g~~~~~-~~~g---~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~--------f~-~~----- 128 (163)
+.+.|++.++.+.. +.++ ++ +++.++ +...+.+.|.+ +||.+.++.. |. ..
T Consensus 259 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~~L~~-~GI~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (367)
T 3nyt_A 259 YDLSLKQVGIGTPFIEVNNISVYAQYTVRMD---------NRESVQASLKA-AGVPTAVHYPIPLNKQPAVADEKAKLPV 328 (367)
T ss_dssp HHHHHHHTTCCCCCCCTTEECCCSSEEEECS---------SHHHHHHHHHH-HTCCCBCSCSSCGGGSGGGCCTTCCCHH
T ss_pred HHHHhccCCeeccCCCCCCceeeEEEEEEeC---------CHHHHHHHHHH-CCCceeccCCCccccChhhhccCCCChH
Confidence 77778777654432 2222 22 233333 45778887766 8999987643 10 00
Q ss_pred ----CCceEEEEEec-CChhHHHHHHHHHHHHHHHhhh
Q 042816 129 ----EPGWFSFSFTL-LTEKDIHVVMERIRRISQTCKS 161 (163)
Q Consensus 129 ----~~~~iRi~~~~-~~~~~l~~~~~~l~~~~~~~~~ 161 (163)
..+.+|+++.. .++++++..++.|.++-..+.|
T Consensus 329 ~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~~~~~~~ 366 (367)
T 3nyt_A 329 GDKAATQVMSLPMHPYLDTASIKIICAALTNLEHHHHH 366 (367)
T ss_dssp HHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-------
T ss_pred HHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHhhcccC
Confidence 04578888864 4778888888877765544433
No 209
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=98.11 E-value=3.3e-05 Score=60.28 Aligned_cols=102 Identities=8% Similarity=0.050 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhc-CCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCC
Q 042816 52 KFININRERLRRLYVKFVAGLRQL-GIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEP 130 (163)
Q Consensus 52 ~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~ 130 (163)
+-+++..+.+.++.+++.+.|+++ |+++..+.....+++.++.. .....++.+.|.++.++.+.|+..++ .
T Consensus 369 ~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~~~~iv~f~~~~~-----~~~~~~l~~~L~~~g~~~~~~~~~~g---~ 440 (475)
T 3k40_A 369 ENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLKGS-----NERNEALLKRINGRGHIHLVPAKIKD---V 440 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCCBTTEEEEEESSC-----HHHHHHHHHHHHHHTSCBCEEEEETT---E
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEeCCc-----hHHHHHHHHHHHhCCcEEEEeeEECC---E
Confidence 445777888899999999999998 88887655555566666531 02567899998885555666654443 6
Q ss_pred ceEEEEEec--CChhHHHHHHHHHHHHHHHhhh
Q 042816 131 GWFSFSFTL--LTEKDIHVVMERIRRISQTCKS 161 (163)
Q Consensus 131 ~~iRi~~~~--~~~~~l~~~~~~l~~~~~~~~~ 161 (163)
.++|++++. .+.++++.+++.|.++.+++..
T Consensus 441 ~~lR~~~~~~~tt~~di~~~~~~i~~~~~~~~~ 473 (475)
T 3k40_A 441 YFLRMAICSRFTQSEDMEYSWKEVSAAADEMEQ 473 (475)
T ss_dssp EEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 799999874 2678999999999999887654
No 210
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=98.08 E-value=3.9e-05 Score=60.43 Aligned_cols=110 Identities=14% Similarity=0.146 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhc-CCcccc---CCceeEEEeecCCcccCC--Ch-------hhHHHHHHHHHHhcCe
Q 042816 51 QKFININRERLRRLYVKFVAGLRQL-GIECAK---SNGGFYCWADMSGLISSY--SE-------KGELELWDKLLNVAKV 117 (163)
Q Consensus 51 ~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~---~~~g~~~~~~~~~~~~~~--~~-------~~~~~~~~~l~~~~gi 117 (163)
.+.+++..+...++.+++.+.|++. |+++.. |..++..|.-.|...... +. ....++.+.|.+ .|+
T Consensus 384 ~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~-~G~ 462 (511)
T 3vp6_A 384 TVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMME-SGT 462 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHH-HTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHh-cCC
Confidence 4557788888899999999999988 887765 677776654445433110 10 013468888887 565
Q ss_pred EEcCCCCCCCCCCceEEEEEec--CChhHHHHHHHHHHHHHHHhhhc
Q 042816 118 NVTPGSSCHCIEPGWFSFSFTL--LTEKDIHVVMERIRRISQTCKSH 162 (163)
Q Consensus 118 ~v~pg~~f~~~~~~~iRi~~~~--~~~~~l~~~~~~l~~~~~~~~~~ 162 (163)
.+.. ..+...+.+++|++++. .+.++++.+++.|.+.-+.+.||
T Consensus 463 ~~~~-~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~~~~~~~~ 508 (511)
T 3vp6_A 463 TMVG-YQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDLHHH 508 (511)
T ss_dssp CEEE-EEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHC-----
T ss_pred EEEE-EEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhhhhc
Confidence 4443 22222224689999943 37788999999999888776654
No 211
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=98.05 E-value=6.7e-05 Score=56.98 Aligned_cols=119 Identities=10% Similarity=-0.007 Sum_probs=77.7
Q ss_pred CCChHHHHHHHHhcCChHHHHHH--HHHHHHHHHHHHHHHHHHhhhc-CCcccc----CCceeEEEeecCCcccCCChhh
Q 042816 31 SVSAPSQNLLVSMLSDTKFVQKF--ININRERLRRLYVKFVAGLRQL-GIECAK----SNGGFYCWADMSGLISSYSEKG 103 (163)
Q Consensus 31 ~~s~~~q~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~-g~~~~~----~~~g~~~~~~~~~~~~~~~~~~ 103 (163)
+++...-.++..+++.- .+. ++...++.++..+++++.|+++ |+...+ ..++..+-+.++..- .+..-
T Consensus 249 Tp~v~~i~~l~~al~~l---~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~--~~~~~ 323 (377)
T 3e77_A 249 TPPCFSIYVMGLVLEWI---KNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAK--GDDAL 323 (377)
T ss_dssp CCCHHHHHHHHHHHHHH---HHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESSTT--CCHHH
T ss_pred CchHHHHHHHHHHHHHH---HHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCCCC--CchhH
Confidence 45555555555555421 232 6778888889999999999998 776432 123444555565410 00001
Q ss_pred HHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CChhHHHHHHHHHHHHHHHh
Q 042816 104 ELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LTEKDIHVVMERIRRISQTC 159 (163)
Q Consensus 104 ~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~~l~~~~~~l~~~~~~~ 159 (163)
+..+...+.+ +||.+.+|... .+.+|+|+.. .+.++++..++.|+++.++.
T Consensus 324 ~~~~l~~l~~-~Gi~~~~g~~~----~g~iRiS~~~~~t~edId~l~~al~~~~~~~ 375 (377)
T 3e77_A 324 EKRFLDKALE-LNMLSLKGHRS----VGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 375 (377)
T ss_dssp HHHHHHHHHH-TTEESCBCCTT----TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-CCcEEeCCCCc----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHc
Confidence 2456676665 89999988632 4569999975 37899999999999988764
No 212
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=98.03 E-value=5.7e-05 Score=58.98 Aligned_cols=101 Identities=13% Similarity=0.042 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhc-CCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCC
Q 042816 52 KFININRERLRRLYVKFVAGLRQL-GIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEP 130 (163)
Q Consensus 52 ~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~ 130 (163)
+.+++..+...++.+++.+.|+++ |+++..+.....++++++..- ....++.+.|.++..+.+.|+... +.
T Consensus 376 ~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~-----~~~~~l~~~L~~~g~~~~~~~~~~---g~ 447 (481)
T 4e1o_A 376 KNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGPN-----SLTENVLKEIAKAGRLFLIPATIQ---DK 447 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCTTEECCSCCCSSEEEEEESSCH-----HHHHHHHHHHHHHCSSBCEEEEET---TE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEeCCch-----HHHHHHHHHHHhCCeEEEEeeEEC---CE
Confidence 445777888889999999999998 888876555556677775310 256788998887444565654432 25
Q ss_pred ceEEEEEec--CChhHHHHHHHHHHHHHHHhh
Q 042816 131 GWFSFSFTL--LTEKDIHVVMERIRRISQTCK 160 (163)
Q Consensus 131 ~~iRi~~~~--~~~~~l~~~~~~l~~~~~~~~ 160 (163)
.++|+++.. .++++++.+++.|.++.+++-
T Consensus 448 ~~lR~~~~~~~tt~~di~~~~~~i~~~~~~l~ 479 (481)
T 4e1o_A 448 LIIRFTVTSQFTTRDDILRDWNLIRDAATLIL 479 (481)
T ss_dssp EEEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 799999864 257899999999999887754
No 213
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=97.96 E-value=0.00043 Score=52.79 Aligned_cols=135 Identities=14% Similarity=0.106 Sum_probs=73.8
Q ss_pred CCCCceeEEEEEecC-H--------------------------HHHHHHHHhh-ccc--CCChHHHHHHHHhcCChHHHH
Q 042816 2 LSLPGFRISVIYSYN-N--------------------------SVLAAAKKLA-RFS--SVSAPSQNLLVSMLSDTKFVQ 51 (163)
Q Consensus 2 ~~~~G~RiG~~i~~~-~--------------------------~~~~~~~~~~-~~~--~~s~~~q~~~~~~l~~~~~~~ 51 (163)
++.||.|+|++++.+ . ++.+.++... ... ..++....++...++.
T Consensus 204 ~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~----- 278 (412)
T 2cb1_A 204 ASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLET----- 278 (412)
T ss_dssp TTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGG-----
T ss_pred ccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCch-----
Confidence 678999999998744 2 4555555443 212 2233333333333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhc-CCccc-cC----------------CceeEEEeecCCcccCCChhhHHHHHHHHHH
Q 042816 52 KFININRERLRRLYVKFVAGLRQL-GIECA-KS----------------NGGFYCWADMSGLISSYSEKGELELWDKLLN 113 (163)
Q Consensus 52 ~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~-~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 113 (163)
+....+...++.+.+.+.|.++ ++... .| ..+-.+.+.+ . +..++.+.| +
T Consensus 279 --l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~-~--------~~~~~~~~l-~ 346 (412)
T 2cb1_A 279 --VALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDL-G--------DLERASRFL-G 346 (412)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC-S--------SHHHHHHHH-H
T ss_pred --HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe-C--------CHHHHHHHH-H
Confidence 1223333456778888888887 77633 22 1233455566 3 335555544 4
Q ss_pred hcCeEEcCCCC---------CCC---------------CCCceEEEEEecCChhHHHHHHHHHHHHHH
Q 042816 114 VAKVNVTPGSS---------CHC---------------IEPGWFSFSFTLLTEKDIHVVMERIRRISQ 157 (163)
Q Consensus 114 ~~gi~v~pg~~---------f~~---------------~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~ 157 (163)
+.||.+ .++. ... ..++.+|+|++. ++.++-++.+.++++
T Consensus 347 ~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~---~~~~~~i~~l~~al~ 410 (412)
T 2cb1_A 347 AIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGL---EDPLDLLALFEEALE 410 (412)
T ss_dssp HCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCS---SCHHHHHHHHHHHHH
T ss_pred hCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHh
Confidence 589998 7641 100 015899999986 333445555555543
No 214
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=97.90 E-value=0.00042 Score=52.24 Aligned_cols=138 Identities=9% Similarity=0.015 Sum_probs=86.1
Q ss_pred eEEEEEecCHHHHHHHHH-----------h-hc---ccCCChHHHHHHHHhcCChHHHHHH--HHHHHHHHHHHHHHHHH
Q 042816 8 RISVIYSYNNSVLAAAKK-----------L-AR---FSSVSAPSQNLLVSMLSDTKFVQKF--ININRERLRRLYVKFVA 70 (163)
Q Consensus 8 RiG~~i~~~~~~~~~~~~-----------~-~~---~~~~s~~~q~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~ 70 (163)
.+|++++ .+++.+.+.. . .. +.+++...-.++..+++- +.+. ++...++.++..+++++
T Consensus 200 G~g~l~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~---l~~~gG~~~i~~~~~~l~~~l~~ 275 (361)
T 3m5u_A 200 GLSCIFI-RKDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDW---LLNQGGLDKVHEKNSQKATMLYE 275 (361)
T ss_dssp TCEEEEE-EHHHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHH---HHTTTCHHHHHHHHHHHHHHHHH
T ss_pred ccEEEEE-cHHHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHH---HHHccCHHHHHHHHHHHHHHHHH
Confidence 3677888 7777766543 0 01 123455554444444432 1222 56778888889999999
Q ss_pred HhhhcC-C-cccc-C--CceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CChhH
Q 042816 71 GLRQLG-I-ECAK-S--NGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LTEKD 144 (163)
Q Consensus 71 ~l~~~g-~-~~~~-~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~~ 144 (163)
.|++++ + .... + .....+-+.+|.. .+ .+ .++...|. ++||.+.+|..- .+.+|+|+.. .+.++
T Consensus 276 ~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~---~~-~~-~~~~~~L~-~~gI~~~~g~~~----~g~iRiS~~~~~t~ed 345 (361)
T 3m5u_A 276 CIDLSNGFYKGHADKKDRSLMNVSFNIAKN---KD-LE-PLFVKEAE-EAGMIGLKGHRI----LGGIRASIYNALNLDQ 345 (361)
T ss_dssp HHHTSTTSEEESSCGGGBCSSEEEEEESSC---TT-HH-HHHHHHHH-HTTEECCBCCTT----TCSEEEECCTTSCHHH
T ss_pred HHHHCCCeeeccCCHHHcCCeEEEEECCCc---hh-hh-HHHHHHHH-HCCCEEecCCCc----cCeEEEEccCCCCHHH
Confidence 999884 5 3321 1 2233444555531 00 13 46777665 589999887542 2459999975 37899
Q ss_pred HHHHHHHHHHHHHHh
Q 042816 145 IHVVMERIRRISQTC 159 (163)
Q Consensus 145 l~~~~~~l~~~~~~~ 159 (163)
++..++.|+++.+++
T Consensus 346 Id~l~~al~~~~~~~ 360 (361)
T 3m5u_A 346 VKTLCEFMKEFQGKY 360 (361)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999988764
No 215
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=97.87 E-value=5.2e-05 Score=58.52 Aligned_cols=93 Identities=13% Similarity=0.138 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhc-CCc-cccCC----------------ceeEEEeecCCcccCCChhhHHHHHHHHHHhc
Q 042816 54 ININRERLRRLYVKFVAGLRQL-GIE-CAKSN----------------GGFYCWADMSGLISSYSEKGELELWDKLLNVA 115 (163)
Q Consensus 54 ~~~~~~~~~~~~~~l~~~l~~~-g~~-~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 115 (163)
+....+...++...+.+.|+++ +++ +..|. ||+.+|++++.. .+...|.+.|.. .
T Consensus 298 l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~~------~~~~~~~~~l~~-~ 370 (430)
T 3ri6_A 298 MALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESK------EASYRFMDALKL-I 370 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSH------HHHHHHHHHCSS-S
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCH------HHHHHHHHhCCc-c
Confidence 3444455677888899999887 554 44444 776899999742 356677776643 6
Q ss_pred CeEEcCCCCCCC---------------------CCCceEEEEEecCChhHHHHHHHHHHHHH
Q 042816 116 KVNVTPGSSCHC---------------------IEPGWFSFSFTLLTEKDIHVVMERIRRIS 156 (163)
Q Consensus 116 gi~v~pg~~f~~---------------------~~~~~iRi~~~~~~~~~l~~~~~~l~~~~ 156 (163)
++.+.+|..+.. ..++.+|+|++. |+.+..++.|.+++
T Consensus 371 ~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~---E~~~dl~~dl~~al 429 (430)
T 3ri6_A 371 RRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGI---EEIEDLKEDILQAL 429 (430)
T ss_dssp EECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCS---SCHHHHHHHHHHHH
T ss_pred eecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHhh
Confidence 777777876651 237899999997 45555555555544
No 216
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=97.86 E-value=0.00024 Score=54.25 Aligned_cols=140 Identities=11% Similarity=0.007 Sum_probs=82.8
Q ss_pred CCCCceeEEE--EEecCHHHHHHHHHhhcc--cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-C
Q 042816 2 LSLPGFRISV--IYSYNNSVLAAAKKLARF--SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL-G 76 (163)
Q Consensus 2 ~~~~G~RiG~--~i~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g 76 (163)
++.+|.++|. +++.++++.+.+...... .+.+++...++...++.- ....+...++...+.+.|+++ .
T Consensus 215 l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~l-------~~r~~~~~~~a~~l~~~L~~~p~ 287 (400)
T 3nmy_A 215 LNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSFLALRGLKTL-------PLRMRAHCENALALAQWLETHPA 287 (400)
T ss_dssp TTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTTH-------HHHHHHHHHHHHHHHHHHTTCTT
T ss_pred cCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhHH-------HHHHHHHHHHHHHHHHHHHcCCC
Confidence 5667778755 454478888888776653 345666666665655542 233444566777888888776 3
Q ss_pred Cc-cccC----------------CceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCC-------------
Q 042816 77 IE-CAKS----------------NGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCH------------- 126 (163)
Q Consensus 77 ~~-~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~------------- 126 (163)
+. +..| ..|..++++++... .....|.+.|. -.++.+..|..+.
T Consensus 288 v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~-----~~~~~~~~~l~-~~~~~~s~G~~~sl~~~p~~~~~~~~ 361 (400)
T 3nmy_A 288 IEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGF-----DAAKRFCEKTE-LFTLAESLGGVESLVNHPAVMTHASI 361 (400)
T ss_dssp EEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHH-----HHHHHHHHHCS-SSEECSCCCSSSCEEECTTTTTTTTS
T ss_pred EeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcH-----HHHHHHHHcCC-cceEecCCCCCcceeeCccccccccC
Confidence 32 2222 24667888886421 13445555442 2344444444321
Q ss_pred --------CCCCceEEEEEecCChhHHHHHHHHHHHHHH
Q 042816 127 --------CIEPGWFSFSFTLLTEKDIHVVMERIRRISQ 157 (163)
Q Consensus 127 --------~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~ 157 (163)
...++.+|+|++. |+.+..++.|.++++
T Consensus 362 ~~~~~~~~gi~~~liRlsvGl---e~~~dli~dl~~al~ 397 (400)
T 3nmy_A 362 PVARREQLGISDALVRLSVGI---EDLGDLRGDLERALV 397 (400)
T ss_dssp CHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHC
T ss_pred CHHHHHhcCCCcCeEEEEeCc---CCHHHHHHHHHHHHh
Confidence 0136799999997 455556666666654
No 217
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=97.63 E-value=0.0004 Score=53.99 Aligned_cols=140 Identities=16% Similarity=0.103 Sum_probs=77.6
Q ss_pred CceeEEEEEecCHHHHHHHHHhhc------ccCCChHHHHHHHH---hcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 042816 5 PGFRISVIYSYNNSVLAAAKKLAR------FSSVSAPSQNLLVS---MLSDTKFVQKFININRERLRRLYVKFVAGLRQL 75 (163)
Q Consensus 5 ~G~RiG~~i~~~~~~~~~~~~~~~------~~~~s~~~q~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 75 (163)
.|+-+|.+.+ .+++.+.+..... .++.|+++..++.+ .+++++. .+.+++.-+.++++. .+.++++
T Consensus 291 gG~Piga~~~-~~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~-~~~~~~~g~~l~~~L---~~l~~~~ 365 (454)
T 4ao9_A 291 GGMSFGAFGG-RADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEA-AGALAERGEALRARL---NALCANE 365 (454)
T ss_dssp TTSSCEEEEE-CHHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHH-HHHHHHHHHHHHHHH---HHHHHHH
T ss_pred CCCcceeeee-HHHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccCh-hHHHHHHHHHHHHHH---HHHHhhC
Confidence 3677999999 8999887754221 13456666654444 4455433 233333333333333 3333334
Q ss_pred CCcc-ccCCceeEEEeecCC-ccc------CCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHH
Q 042816 76 GIEC-AKSNGGFYCWADMSG-LIS------SYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHV 147 (163)
Q Consensus 76 g~~~-~~~~~g~~~~~~~~~-~~~------~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~ 147 (163)
++.. ....| ..+-+.+.. ... ..+..-...++..+++ +||++.|. +++.++.. ++++++++
T Consensus 366 ~~~~~vrg~G-~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll~-~Gv~~~p~--------~~~~~s~~-~T~~dId~ 434 (454)
T 4ao9_A 366 GVAMQFTGIG-SLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLLN-EDIYSSPR--------GFVVLSLP-LTDADIDR 434 (454)
T ss_dssp TBSCEEEEET-TEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHHH-TTEECCTT--------CEEECCTT-CCHHHHHH
T ss_pred CCCEEEeeec-eEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHHH-CCEEEcCC--------CCEEEeCC-CCHHHHHH
Confidence 3222 22233 333344421 110 0111123456777877 89999873 23445544 48999999
Q ss_pred HHHHHHHHHHHhh
Q 042816 148 VMERIRRISQTCK 160 (163)
Q Consensus 148 ~~~~l~~~~~~~~ 160 (163)
+++.|.+++.++.
T Consensus 435 ~l~al~~~l~~~~ 447 (454)
T 4ao9_A 435 YVAAIGSFIGGHG 447 (454)
T ss_dssp HHHHHHHHHHHSG
T ss_pred HHHHHHHHHHhcc
Confidence 9999999998764
No 218
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=97.59 E-value=0.002 Score=48.63 Aligned_cols=138 Identities=12% Similarity=0.101 Sum_probs=79.2
Q ss_pred eEEEEEecCHHHHHHHHHhhcc--------------cCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042816 8 RISVIYSYNNSVLAAAKKLARF--------------SSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLR 73 (163)
Q Consensus 8 RiG~~i~~~~~~~~~~~~~~~~--------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 73 (163)
+.|++++.++++++.+...... ..++.+.+.++...++. ++...+..+++.+.+.+.|+
T Consensus 197 ~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~-------l~~~~~~~~~~~~~~~~~L~ 269 (377)
T 3ju7_A 197 EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATMKK-------WDDKLKERTRISEWYKQLLQ 269 (377)
T ss_dssp SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHHHT-------HHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhc
Confidence 6889888778888888776541 23455555444444433 23334444555666667777
Q ss_pred hc-CC--ccccCCc--ee--EEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCC--CCC---------C-------
Q 042816 74 QL-GI--ECAKSNG--GF--YCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSS--CHC---------I------- 128 (163)
Q Consensus 74 ~~-g~--~~~~~~~--g~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~--f~~---------~------- 128 (163)
++ ++ .+.++.+ .+ |+.+.++... +..++.+.|.+ +||.+.++.. ... .
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~L~~-~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 342 (377)
T 3ju7_A 270 SNGLMKKGWQLQKTEAVIQQFMPILCPEEV------RNKQVIEDLKK-QKIEARLYFSPSCHQQVLFRNYKSTDLTRTNK 342 (377)
T ss_dssp HTTTTTTTCBCCCCSCBCCSSEEEECCTTS------CHHHHHHHHHT-TTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHH
T ss_pred CCCCccccccCCCCCcceEEEEEEEeCChh------hHHHHHHHHHH-CCCceecccCCccccchhhhcCCCCCCHHHHH
Confidence 66 32 2322221 22 2234444321 36788888865 8999887651 110 0
Q ss_pred -CCceEEEEEec-CChhHHHHHHHHHHHHHHHh
Q 042816 129 -EPGWFSFSFTL-LTEKDIHVVMERIRRISQTC 159 (163)
Q Consensus 129 -~~~~iRi~~~~-~~~~~l~~~~~~l~~~~~~~ 159 (163)
..+.+|+.+.. .++++++..++.|.+++.+.
T Consensus 343 ~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~~~ 375 (377)
T 3ju7_A 343 IAKRIVSLPLWEGMTKEIVEQIVICLGQKVVSA 375 (377)
T ss_dssp HHHHEEEECCCTTCCHHHHHHHHHHHTC-----
T ss_pred HHhCEEECCCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 04578888864 47789999999888877653
No 219
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=97.48 E-value=0.0024 Score=48.04 Aligned_cols=95 Identities=9% Similarity=0.007 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhc-CCccccC--CceeE-EEeecCCcccCCChhhHHHHHHHHHHhcCeEEcC---CCCC
Q 042816 53 FININRERLRRLYVKFVAGLRQL-GIECAKS--NGGFY-CWADMSGLISSYSEKGELELWDKLLNVAKVNVTP---GSSC 125 (163)
Q Consensus 53 ~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~--~~g~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~p---g~~f 125 (163)
++++..+..+++++++.+.|+++ |+++..+ .++++ +++.++... + .+..++.+.|.+ +||.+.+ |+..
T Consensus 267 ~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~-~~~~~l~~~L~~-~gI~v~~~~~~~~~ 341 (390)
T 3b8x_A 267 KLPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESSWFGFSFIIKKDS---G-VIRKQLVENLNS-AGIECRPIVTGNFL 341 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCCCCEEEEEECTTS---C-CCHHHHHHHHHH-TTBCCBCSTTSSGG
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCcccEEEEEEecCcC---c-ccHHHHHHHHHH-CCCCeeeecCCchh
Confidence 34567777788889999999887 7766543 34443 566665210 0 156788888865 8999987 3211
Q ss_pred CC-C-----------C--------CceEEEEEec-CChhHHHHHHHHH
Q 042816 126 HC-I-----------E--------PGWFSFSFTL-LTEKDIHVVMERI 152 (163)
Q Consensus 126 ~~-~-----------~--------~~~iRi~~~~-~~~~~l~~~~~~l 152 (163)
.. + . .+.+||++.. .+.++++..++.|
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 342 KNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp GCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred hcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 11 0 0 1368999865 4778877777654
No 220
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=97.48 E-value=0.0021 Score=48.86 Aligned_cols=114 Identities=4% Similarity=-0.026 Sum_probs=74.1
Q ss_pred CCChHHHHHHHHhcCChHHHHHH--HHHHHHHHHHHHHHHHHHhhhcCC-ccc-c--CCceeEEEeecCC-cccCCChhh
Q 042816 31 SVSAPSQNLLVSMLSDTKFVQKF--ININRERLRRLYVKFVAGLRQLGI-ECA-K--SNGGFYCWADMSG-LISSYSEKG 103 (163)
Q Consensus 31 ~~s~~~q~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~g~-~~~-~--~~~g~~~~~~~~~-~~~~~~~~~ 103 (163)
+++.+.-.++..+++.- .+. ++...++.++..+++++.|+++|+ ... . ..+...+-+.+|. .+ +
T Consensus 264 Tp~v~~i~~l~~Al~~~---~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~~~------~ 334 (386)
T 3qm2_A 264 TPPTFAWYLSGLVFKWL---KAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADNTL------D 334 (386)
T ss_dssp --CCSHHHHHHHHHHHH---HHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSGGG------H
T ss_pred CCcHHHHHHHHHHHHHH---HHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCccc------c
Confidence 45555555555555422 333 677888888899999999988764 211 1 1233345556663 22 4
Q ss_pred HHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CChhHHHHHHHHHHHHHHHh
Q 042816 104 ELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LTEKDIHVVMERIRRISQTC 159 (163)
Q Consensus 104 ~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~~l~~~~~~l~~~~~~~ 159 (163)
..+...|. ++||.+.+|... .+.+|+|+.. .+.++++..++.|+++.++.
T Consensus 335 -~~~~~~L~-~~gI~~~~g~~~----~~~iRiS~~~~~t~edId~l~~~l~~~~~~~ 385 (386)
T 3qm2_A 335 -KVFLEESF-AAGLHALKGHRV----VGGMRASIYNAMPIEGVKALTDFMIDFERRH 385 (386)
T ss_dssp -HHHHHHHH-HTTEECCBCCTT----TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHH-HCCCEEeCCCCC----cCeEEEEcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 56777665 589999887543 2459999975 37899999999999887663
No 221
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=97.48 E-value=1.2e-05 Score=66.85 Aligned_cols=144 Identities=12% Similarity=0.069 Sum_probs=83.9
Q ss_pred c-eeEEEEEecCHHHHHHHHHhh------c--ccCCChHHHHHHHHhcC---ChHHHHHHHHHHHHHHHHH-HHHHHHHh
Q 042816 6 G-FRISVIYSYNNSVLAAAKKLA------R--FSSVSAPSQNLLVSMLS---DTKFVQKFININRERLRRL-YVKFVAGL 72 (163)
Q Consensus 6 G-~RiG~~i~~~~~~~~~~~~~~------~--~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~-~~~l~~~l 72 (163)
| +++|++++ ++++.+.+.... . .++.+++++.++.+.|+ ++.+ .+.+.+..+.+++. .+.+.+.+
T Consensus 669 G~~Plgav~~-~~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l-~~~~~~~~~~l~~~l~~~l~~~l 746 (831)
T 4a0g_A 669 GMVPLAVTLA-TDAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPET-NHNITSQGKTLRELWDEELVQQI 746 (831)
T ss_dssp TSSCCEEEEE-CHHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTT-CTTBCTTSSBBCCCSCHHHHHHH
T ss_pred CccCcEEEEE-CHHHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 79999999 999999886531 1 24567777776665553 2211 11111111111110 11234445
Q ss_pred hhc-CCccccCCceeEEEeecCCcc--cCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CChhHHHHH
Q 042816 73 RQL-GIECAKSNGGFYCWADMSGLI--SSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LTEKDIHVV 148 (163)
Q Consensus 73 ~~~-g~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~~l~~~ 148 (163)
+++ .+...... |.++.+++...- ..........+++.|++ +||.+.|+ .+.+|++... +++++++++
T Consensus 747 ~~~~~v~~vrg~-Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e-~Gv~v~p~-------g~~lrl~pp~~~t~e~id~~ 817 (831)
T 4a0g_A 747 SSHSAVQRVVVI-GTLFALELKADASNSGYASLYAKSLLIMLRE-DGIFTRPL-------GNVIYLMCGPCTSPEICRRL 817 (831)
T ss_dssp HHSTTEEEEEEE-TTEEEEEEC---------CHHHHHHHHHHHH-TTEECCCB-------TTEEEEECCTTCCHHHHHHH
T ss_pred hhCCCceeEeec-ccEEEEEEecCccccccchHHHHHHHHHHHH-CCcEEEec-------CCEEEEECCCCCCHHHHHHH
Confidence 555 34444444 445555654210 00011245678888876 89999874 2689998532 489999999
Q ss_pred HHHHHHHHHHhh
Q 042816 149 MERIRRISQTCK 160 (163)
Q Consensus 149 ~~~l~~~~~~~~ 160 (163)
+++|.++++++.
T Consensus 818 ~~~l~~~l~~l~ 829 (831)
T 4a0g_A 818 LTKLYKRLGEFN 829 (831)
T ss_dssp HHHHHHHHTTTC
T ss_pred HHHHHHHHHHhc
Confidence 999999988764
No 222
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=97.33 E-value=0.0063 Score=50.02 Aligned_cols=51 Identities=8% Similarity=0.055 Sum_probs=39.3
Q ss_pred hHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CChhHHHHHHHHHHHHHHHhh
Q 042816 103 GELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LTEKDIHVVMERIRRISQTCK 160 (163)
Q Consensus 103 ~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~~l~~~~~~l~~~~~~~~ 160 (163)
+...+.+.|.+ +||.+.+. +...+|++++. .+.++++..++.|.++.+.+.
T Consensus 516 ~~~~l~~~L~e-~GI~v~~~------~~~~ir~~~s~g~t~e~i~~Ll~aL~~i~~~~~ 567 (730)
T 1c4k_A 516 PATIVANYLRD-HGIIPEKS------DLNSILFLMTPAETPAKMNNLITQLLQLQRLIE 567 (730)
T ss_dssp CHHHHHHHHHH-TTCCCSEE------CSSEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHH-CCcEEEEC------CCCeEEEEeCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 67888988876 69988642 25788988865 477889999999988876653
No 223
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=97.21 E-value=0.0016 Score=49.90 Aligned_cols=140 Identities=9% Similarity=0.047 Sum_probs=74.2
Q ss_pred CCCCcee-EEEEEecCHHHHHHHHHhhccc--CCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CC
Q 042816 2 LSLPGFR-ISVIYSYNNSVLAAAKKLARFS--SVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL-GI 77 (163)
Q Consensus 2 ~~~~G~R-iG~~i~~~~~~~~~~~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~ 77 (163)
+|.+|.+ +||+++ ++++++.+....... ..++....++...+ +.+....+...++...+.+.|+++ .+
T Consensus 232 lg~~g~~~~G~l~~-~~~~~~~l~~~~~~~G~~~~~~~a~~~~~~l-------~~l~~r~~~~~~n~~~l~~~L~~~~~v 303 (415)
T 2fq6_A 232 LVGHSDAMIGTAVC-NARCWEQLRENAYLMGQMVDADTAYITSRGL-------RTLGVRLRQHHESSLKVAEWLAEHPQV 303 (415)
T ss_dssp TTCSSSCCCEEEEE-CTTTHHHHHHHHHHTTCCCCHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred cCCCCCceEEEEEe-CHHHHHHHHHHHHhcCCCCCHHHHHHHHhhh-------hHHHHHHHHHHHHHHHHHHHHHcCCCe
Confidence 5677765 699999 777878777665432 23433333332222 223334444566777777777765 22
Q ss_pred c-cccC----------------CceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCC----------------
Q 042816 78 E-CAKS----------------NGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSS---------------- 124 (163)
Q Consensus 78 ~-~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~---------------- 124 (163)
. +..| ..|..+++.++... +..+...+.+.| +..++.+.-|+.
T Consensus 304 ~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~---~~~~~~~~l~~l-~~~~~a~s~G~~~s~~~~~~p~~~s~~~ 379 (415)
T 2fq6_A 304 ARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKL---NNEELANYLDNF-SLFSMAYSWGGYESLILANQPEHIAAIR 379 (415)
T ss_dssp EEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCC---CHHHHHHHHTTC-SSCEECSCCCSSSCEEEEECHHHHHTTC
T ss_pred eEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCC---CHHHHHHHHHhC-CcCeEeccCCCCceeEEecCCCcccccc
Confidence 1 1111 13456777886420 001344555443 223455554422
Q ss_pred ----CCCCCCceEEEEEecCChhHHHHHHHHHHHHHH
Q 042816 125 ----CHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQ 157 (163)
Q Consensus 125 ----f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~ 157 (163)
.+ ..++.+|+|++. ++.++.++.+.++++
T Consensus 380 ~~~~~g-~~~~~iRlS~G~---e~~~d~i~~l~~al~ 412 (415)
T 2fq6_A 380 PQGEID-FSGTLIRLHIGL---EDVDDLIADLDAGFA 412 (415)
T ss_dssp TTCCCC-CCSCEEEEECCS---SCHHHHHHHHHHHHH
T ss_pred chhhcC-CCCCEEEEEecC---CCHHHHHHHHHHHHH
Confidence 11 125899999997 344555555655554
No 224
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=97.17 E-value=0.0096 Score=46.72 Aligned_cols=105 Identities=11% Similarity=0.108 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhc-CCcccc-CCceeEEEeecCCcccC--C--Chhh-----HHHHHHHHHHhcCeEEc
Q 042816 52 KFININRERLRRLYVKFVAGLRQL-GIECAK-SNGGFYCWADMSGLISS--Y--SEKG-----ELELWDKLLNVAKVNVT 120 (163)
Q Consensus 52 ~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~-~~~g~~~~~~~~~~~~~--~--~~~~-----~~~~~~~l~~~~gi~v~ 120 (163)
..+++..+...++.+++.+.|+++ |+++.. |..+.+.|...|..+.. . .... ...+.+.|.+ .|+...
T Consensus 397 ~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~~-~G~~~~ 475 (515)
T 2jis_A 397 QGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVK-EGSMMI 475 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHHH-HTSCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHh-cCCEEE
Confidence 335677788888999999999988 877764 45565555444432211 0 0000 1125566665 575432
Q ss_pred CCCCCCCCCCceEEEEEe-c-CChhHHHHHHHHHHHHHHH
Q 042816 121 PGSSCHCIEPGWFSFSFT-L-LTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 121 pg~~f~~~~~~~iRi~~~-~-~~~~~l~~~~~~l~~~~~~ 158 (163)
+.... ....+++|++++ . .+.++++.+++.|.+++++
T Consensus 476 ~~~~~-~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 476 GYQPH-GTRGNFFRVVVANSALTCADMDFLLNELERLGQD 514 (515)
T ss_dssp EEEEE-TTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred EEEEE-CCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 11111 112579999995 2 3888999999999887654
No 225
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=97.15 E-value=0.0038 Score=48.50 Aligned_cols=147 Identities=10% Similarity=0.000 Sum_probs=85.8
Q ss_pred CceeEEEEEecCHHHHHHHHHhhc--ccCCChHHHHHHHHhcC---ChHHHHHHHHHHHHHHHHHHHHHHHHhhhcC---
Q 042816 5 PGFRISVIYSYNNSVLAAAKKLAR--FSSVSAPSQNLLVSMLS---DTKFVQKFININRERLRRLYVKFVAGLRQLG--- 76 (163)
Q Consensus 5 ~G~RiG~~i~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g--- 76 (163)
.|+-+|.+++ .+++.+.+..... .++.++++-.++.+.|+ ++.. .++.+++-+.+.++.+.+.+.+...+
T Consensus 299 gg~P~~av~~-~~~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~~l-~~~~~~~g~~l~~~L~~l~~~~~~~~~~~ 376 (456)
T 4atq_A 299 GGLPLSAITG-RADLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQHDL-NGRARHIEELALGKLRELAAELSAGGGSV 376 (456)
T ss_dssp TTSSCEEEEE-EHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTH-HHHHHHHHHHHHHHHHHHHHHCC-----C
T ss_pred CcCCceeeEe-cHHHHhcccccCCCCCCCCChHHHHhhHHHHHHHhhccH-HHHHHHHHHHHHHHHHHHHHhcccccCCc
Confidence 4677899999 8888777654433 24667777666665554 2222 33444444444444444444332211
Q ss_pred CccccCCceeEEEeecCCcc-cCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CChhHHHHHHHHHHH
Q 042816 77 IECAKSNGGFYCWADMSGLI-SSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LTEKDIHVVMERIRR 154 (163)
Q Consensus 77 ~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~~l~~~~~~l~~ 154 (163)
+.-.+.. |+++-+++.... ..+...-...++..+++ +||++.++-.+ .+.+||.... ++++++++++++|.+
T Consensus 377 v~~VRG~-Gl~~giel~~~~~~~~~~~~~~~v~~~~~~-~Gvl~~~~g~~----~~~irl~PpL~it~~~id~~l~~l~~ 450 (456)
T 4atq_A 377 VGDIRGR-GAMLAIELVQPGSKEPNAELTKAVAAACLK-EGVIILTCGTY----GNVIRLLPPLVISDELLIDGLEVLAA 450 (456)
T ss_dssp EEEEEEE-TTEEEEEEBCTTSCCBCHHHHHHHHHHHHH-TTEECEEECTT----SCEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred eEEeeec-ceEEEEEEecCCCCCcCHHHHHHHHHHHHH-CCCEEEecCCC----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 1112222 455556664321 12222345678888876 89998864222 3678888653 488999999999999
Q ss_pred HHHHh
Q 042816 155 ISQTC 159 (163)
Q Consensus 155 ~~~~~ 159 (163)
+++.+
T Consensus 451 al~a~ 455 (456)
T 4atq_A 451 AIKAH 455 (456)
T ss_dssp HHHHC
T ss_pred HHHhh
Confidence 98764
No 226
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=97.01 E-value=0.012 Score=45.64 Aligned_cols=144 Identities=13% Similarity=0.110 Sum_probs=83.6
Q ss_pred CCceeEEEEEecCH---------------HHHHHHHHhhcc-cCCCh-HHHHHH-HHhcCChHHHHHHHHHHHHHHHHHH
Q 042816 4 LPGFRISVIYSYNN---------------SVLAAAKKLARF-SSVSA-PSQNLL-VSMLSDTKFVQKFININRERLRRLY 65 (163)
Q Consensus 4 ~~G~RiG~~i~~~~---------------~~~~~~~~~~~~-~~~s~-~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~ 65 (163)
++|=|-|.|.+ ++ ++.+.+.+.--+ ...++ ....++ +.++.+. +....+...+...++.
T Consensus 268 LrGPrGG~Il~-~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea--~~p~fk~Ya~qVv~NA 344 (490)
T 3ou5_A 268 LRGARSGLIFY-RKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQA--CTPMFREYSLQVLKNA 344 (490)
T ss_dssp TCSCSCEEEEE-ECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHH--HSHHHHHHHHHHHHHH
T ss_pred ccCCCceEEEe-ccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHH--HhHhHHHHHHHHHHHH
Confidence 57889999988 43 466777666544 22222 222221 1222211 0122234445555689
Q ss_pred HHHHHHhhhcCCcccc-CCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEc----CCCCCCCCCCceEEEEEec-
Q 042816 66 VKFVAGLRQLGIECAK-SNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVT----PGSSCHCIEPGWFSFSFTL- 139 (163)
Q Consensus 66 ~~l~~~l~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~----pg~~f~~~~~~~iRi~~~~- 139 (163)
+.|.+.|.+.|+++.. ..-+=.+++++...- .+..+..+ +|++.||.+. |++. ....+..|||....
T Consensus 345 kaLA~~L~~~G~~vvsGgTdnHlvLvDl~~~g-----~tG~~ae~-~Le~agItvNkN~iP~D~-sp~~~SGiRiGTpa~ 417 (490)
T 3ou5_A 345 RAMADALLERGYSLVSGGTDNHLVLVDLRPKG-----LDGARAER-VLELVSITANKNTCPGDR-SAITPGGLRLGAPAL 417 (490)
T ss_dssp HHHHHHHHHTTCEEGGGSCSSSEEEEECGGGT-----CCHHHHHH-HHHHTTEECEEECCTTCC-CSSSCSEEEEESHHH
T ss_pred HHHHHHHHhCCCeeecCCCCceEEEEeccccC-----CCHHHHHH-HHHHcCcEECCCCCCCCC-CCCCCCeeEECCHHH
Confidence 9999999999988763 333345677875421 14455555 5566999875 4431 11126789999754
Q ss_pred ----CChhHHHHHHHHHHHHHH
Q 042816 140 ----LTEKDIHVVMERIRRISQ 157 (163)
Q Consensus 140 ----~~~~~l~~~~~~l~~~~~ 157 (163)
..++++++..+.|.+++.
T Consensus 418 TtRG~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 418 TSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHHHH
Confidence 356777777777766553
No 227
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=96.56 E-value=0.0079 Score=45.95 Aligned_cols=24 Identities=13% Similarity=0.264 Sum_probs=18.8
Q ss_pred CceEEEEEecCChhHHHHHHHHHHHHH
Q 042816 130 PGWFSFSFTLLTEKDIHVVMERIRRIS 156 (163)
Q Consensus 130 ~~~iRi~~~~~~~~~l~~~~~~l~~~~ 156 (163)
++.+|+|++. +++++.++.|.+++
T Consensus 397 ~~~vRlS~g~---e~~~~li~~l~~al 420 (421)
T 2ctz_A 397 PEMVRLSVGL---EHVEDLKAELKEAL 420 (421)
T ss_dssp TTEEEEECCS---SCHHHHHHHHHHHT
T ss_pred CCeEEEEeCC---CCHHHHHHHHHHHh
Confidence 5899999986 57777788777654
No 228
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=96.20 E-value=0.12 Score=40.34 Aligned_cols=138 Identities=7% Similarity=0.048 Sum_probs=77.4
Q ss_pred eeEEEEEecCHHHHHHHHHhh----c-----ccCCChHHHHHHHHhcC---ChHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 042816 7 FRISVIYSYNNSVLAAAKKLA----R-----FSSVSAPSQNLLVSMLS---DTKFVQKFININRERLRRLYVKFVAGLRQ 74 (163)
Q Consensus 7 ~RiG~~i~~~~~~~~~~~~~~----~-----~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 74 (163)
+-+|.+++ .+++.+.+.... . .++-++++-.++.+.|+ +... .+..+++-+.++++.+. |.+
T Consensus 312 ~Pl~av~~-~~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~~~l-~~~~~~~g~~l~~~L~~----l~~ 385 (473)
T 4e3q_A 312 FPMGAVIL-GPELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMNEGL-AENVRRLAPRFEERLKH----IAE 385 (473)
T ss_dssp SCCEEEEE-CHHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHHSSH-HHHHHHHHHHHHHHHHH----HTT
T ss_pred CCcccccc-cHHHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhccccH-HHHHHHHHHHHHHHHHH----Hhc
Confidence 78999999 899988886532 1 13456666665555553 2211 23333333333333222 222
Q ss_pred c-CCccccCCceeEEEeecCCcc--cC---CChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CChhHHHH
Q 042816 75 L-GIECAKSNGGFYCWADMSGLI--SS---YSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LTEKDIHV 147 (163)
Q Consensus 75 ~-g~~~~~~~~g~~~~~~~~~~~--~~---~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~~l~~ 147 (163)
. .+.-.+.. |+++-+++...- +. .+..-...+.+.+++ +||++.|. .+.+|++... ++++++++
T Consensus 386 ~~~v~~vRG~-Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~-~Gll~~~~-------g~~i~l~PPL~it~~eid~ 456 (473)
T 4e3q_A 386 RPNIGEYRGI-GFMWALEAVKDKASKTPFDGNLSVSERIANTCTD-LGLICRPL-------GQSVVLCPPFILTEAQMDE 456 (473)
T ss_dssp STTEEEEEEE-TTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHH-TTEECEEE-------TTEEEECCCTTCCHHHHHH
T ss_pred CCCeeEEeec-ceEEEEEEecCccccccccccHHHHHHHHHHHHH-CCcEEEec-------CCEEEEeCCCCCCHHHHHH
Confidence 2 33222333 344445542211 00 011135677887776 89998863 2467876532 48899999
Q ss_pred HHHHHHHHHHHh
Q 042816 148 VMERIRRISQTC 159 (163)
Q Consensus 148 ~~~~l~~~~~~~ 159 (163)
++++|.+++++.
T Consensus 457 ~~~~l~~al~~v 468 (473)
T 4e3q_A 457 MFDKLEKALDKV 468 (473)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988764
No 229
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=95.65 E-value=0.13 Score=42.56 Aligned_cols=50 Identities=10% Similarity=0.008 Sum_probs=36.5
Q ss_pred hHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CChhHHHHHHHHHHHHHHHh
Q 042816 103 GELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LTEKDIHVVMERIRRISQTC 159 (163)
Q Consensus 103 ~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~~l~~~~~~l~~~~~~~ 159 (163)
+...+.++|.+ +||.+... +.+.+|++++. .+.++++..++.|.++.+.+
T Consensus 555 ~~~~l~~~L~~-~gI~~e~~------~~~~v~~~~~~g~t~~~~~~l~~al~~~~~~~ 605 (755)
T 2vyc_A 555 PAALVTAWLGR-HGIVPTRT------TDFQIMFLFSMGVTRGKWGTLVNTLCSFKRHY 605 (755)
T ss_dssp CHHHHHHHHHT-TTCCCSEE------CSSEEEEECCTTCCTTTTHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHH-CCCEEeec------CCCeEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 55788887765 89887432 26789999875 37778888888888776554
No 230
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=95.05 E-value=0.029 Score=43.15 Aligned_cols=97 Identities=4% Similarity=-0.146 Sum_probs=59.2
Q ss_pred CCCc-eeEEEEEecCHHHHHHHHHhhc--ccC--CCh-HH-HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 042816 3 SLPG-FRISVIYSYNNSVLAAAKKLAR--FSS--VSA-PS-QNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL 75 (163)
Q Consensus 3 ~~~G-~RiG~~i~~~~~~~~~~~~~~~--~~~--~s~-~~-q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 75 (163)
|.+| .+.||+++ ++++++.+..... ..+ .++ +. ...+...+ ..+....+...++...+.+.|+++
T Consensus 247 gg~g~~~gG~i~~-~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~l~gl-------~~~~~r~~~~~~~a~~la~~L~~~ 318 (427)
T 3i16_A 247 GGGIAPTGGYLAG-TKDCIEKTSYRLTVPGIGGECGSTFGVVRSMYQGL-------FLAPHISMEALKGAILCSRIMELA 318 (427)
T ss_dssp GTTTCCSCEEEEE-CHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCceEEEEEE-CHHHHHHHHHhcccCccCccCCccHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3344 67899999 9999999988543 121 121 21 11111111 223566777788899999999999
Q ss_pred CCccccCCce----eEEEeecCCcccCCChhhHHHHHHHHHH
Q 042816 76 GIECAKSNGG----FYCWADMSGLISSYSEKGELELWDKLLN 113 (163)
Q Consensus 76 g~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 113 (163)
|+++.+..+. +.+.+.+... .....|++.|..
T Consensus 319 g~~V~p~~~~~~~~~i~~i~l~~~------~~~~~f~~~l~~ 354 (427)
T 3i16_A 319 GFEVMPKYDEKRSDIIQSIKFNDK------DKLIEFCKGIQT 354 (427)
T ss_dssp TCEEESCTTSCCSSSCEEEECSSH------HHHHHHHHHHHH
T ss_pred CCeecCCCCCCCccEEEEEEECCH------HHHHHHHHHHhh
Confidence 8877543221 2444555432 366788888765
No 231
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=94.67 E-value=0.12 Score=39.53 Aligned_cols=97 Identities=5% Similarity=-0.148 Sum_probs=58.3
Q ss_pred CCCc-eeEEEEEecCHHHHHHHHHhhcc--c---CCChHH-HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 042816 3 SLPG-FRISVIYSYNNSVLAAAKKLARF--S---SVSAPS-QNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL 75 (163)
Q Consensus 3 ~~~G-~RiG~~i~~~~~~~~~~~~~~~~--~---~~s~~~-q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 75 (163)
|.+| .+.||+++ ++++++.+...... . ....+. +.++...+ ......++...++..++.+.|+++
T Consensus 230 gg~~~~~GG~v~~-~~~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl-------~~~~~r~~~~~~~a~~la~~L~~~ 301 (409)
T 3jzl_A 230 GGGLAKTGGYIAG-KEALVDLCGYRLTTPGIGREAGASLYSLLEMYQGF-------FLAPHVTAQAIKGARFTAAMLAEF 301 (409)
T ss_dssp GTTTCSSCEEEEE-CHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CccCCceEEEEEe-CHHHHHHHHHHhccccccccccccHHHHHHHHHHH-------hhHHHHHHHHHHHHHHHHHHHHhC
Confidence 3344 45699999 99999999875431 1 111221 22222222 223455666788899999999999
Q ss_pred CCccccCCc----eeEEEeecCCcccCCChhhHHHHHHHHHH
Q 042816 76 GIECAKSNG----GFYCWADMSGLISSYSEKGELELWDKLLN 113 (163)
Q Consensus 76 g~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 113 (163)
|+++.+... .+.+.+.++.. .....|++.|..
T Consensus 302 g~~v~p~~~~~~~~~i~~i~l~~~------~~~~~~~~~L~~ 337 (409)
T 3jzl_A 302 GVEADPVWDAPRTDLIQSVSFHNK------EKMVAFAQAIQA 337 (409)
T ss_dssp TCEEESCTTSCCSSSCCEEECSCH------HHHHHHHHHHHH
T ss_pred CCcccCCCCCCCccEEEEEEeCCH------HHHHHHHHHHHh
Confidence 887744322 22344455432 367788888866
No 232
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=94.38 E-value=1.4 Score=34.44 Aligned_cols=147 Identities=14% Similarity=0.224 Sum_probs=88.4
Q ss_pred EEEecCHHHHHHHHHhhcccCCChHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhc----CCccccC-Cce
Q 042816 11 VIYSYNNSVLAAAKKLARFSSVSAPSQNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQL----GIECAKS-NGG 85 (163)
Q Consensus 11 ~~i~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----g~~~~~~-~~g 85 (163)
.+...++++++.+...-.--.+++++-.....++.-+ .+-++++.+...++.+++.+.|+++ |-++... ...
T Consensus 294 ii~~~d~e~l~~~~~~yPGr~S~Spsldl~~tLL~lG---r~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~~n~ 370 (501)
T 3hl2_A 294 IIAGFNDSFIQEISKMYPGRASASPSLDVLITLLSLG---SNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNP 370 (501)
T ss_dssp EEEESCHHHHHHHHHTSCSCBCSHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCTTCS
T ss_pred EEEeCCHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCCCCc
Confidence 3435577887776443321234556555555565555 3444666666677777777777664 5444433 345
Q ss_pred eEEEeecCCcccCCChhhHHHHHHHHHHhcCeE----EcCCC----------CCCCCC----CceEEEEEec-CChhHHH
Q 042816 86 FYCWADMSGLISSYSEKGELELWDKLLNVAKVN----VTPGS----------SCHCIE----PGWFSFSFTL-LTEKDIH 146 (163)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~----v~pg~----------~f~~~~----~~~iRi~~~~-~~~~~l~ 146 (163)
+.+-+.+...- .....+...+...|.. .+|. |.+|. .|+... -.|+-++.+- ...++++
T Consensus 371 is~a~tl~~~~-~~~~~~~t~~gs~Lf~-r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~yl~~a~aiG~~~~~v~ 448 (501)
T 3hl2_A 371 ISLAMTLKTLD-EHRDKAVTQLGSMLFT-RQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAASAIGMKMQDVD 448 (501)
T ss_dssp SEEEEECTTSC-TTTSCHHHHHHHHHHH-TTCCSCEEECTTCCEEETTEEESSTTTTSSCCSSCEEEEECCTTCCHHHHH
T ss_pred eeEEEeccccc-ccccccHHHHHHHHHh-cCCCcceeecCCCceEECCeeecCcccCCCCCCchHHHHHHHcCCCHHHHH
Confidence 55556665431 1111245677777776 5553 45566 665421 4577777643 4889999
Q ss_pred HHHHHHHHHHHHhhhc
Q 042816 147 VVMERIRRISQTCKSH 162 (163)
Q Consensus 147 ~~~~~l~~~~~~~~~~ 162 (163)
.++++|.+++.++++.
T Consensus 449 ~~~~~l~~~~~~~~~~ 464 (501)
T 3hl2_A 449 LFIKRLDRCLKAVRKE 464 (501)
T ss_dssp HHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999887653
No 233
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=93.59 E-value=0.12 Score=39.68 Aligned_cols=93 Identities=8% Similarity=-0.080 Sum_probs=56.8
Q ss_pred eeEEEEEecCHHHHHHHHHhhcc--cC--CCh-HH-HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc
Q 042816 7 FRISVIYSYNNSVLAAAKKLARF--SS--VSA-PS-QNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIECA 80 (163)
Q Consensus 7 ~RiG~~i~~~~~~~~~~~~~~~~--~~--~s~-~~-q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 80 (163)
.+.||+++ ++++++.+...... .+ .++ +. ...+...+ .......+...++..++.+.|+++|+++.
T Consensus 252 ~~GG~i~~-~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl-------~~~~~r~~~~~~~a~~la~~L~~~g~~V~ 323 (427)
T 3hvy_A 252 TTGGYIAG-KEEYVTQATFRVTVPGIGGECGSTFGVMRSLYEGL-------FMAPHVTIEAVKGAVFCARIMELAGFDVL 323 (427)
T ss_dssp CSCEEEEE-CHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred ceEEEEEE-CHHHHHHHHHHhhcCCcccccCCCHHHHHHHHHhH-------hHHHHHHHHHHHHHHHHHHHHHhCCCeec
Confidence 56799999 99999999885431 21 111 22 22222222 22345566677889999999999988775
Q ss_pred cCCc----eeEEEeecCCcccCCChhhHHHHHHHHHH
Q 042816 81 KSNG----GFYCWADMSGLISSYSEKGELELWDKLLN 113 (163)
Q Consensus 81 ~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 113 (163)
+..+ .+.+.+.+... ....+|++.|..
T Consensus 324 p~~~~~~~~li~~~~l~~~------~~~~~f~~~l~~ 354 (427)
T 3hvy_A 324 PKYNDKRTDIIQAIKFNDE------KKLIDFIKGIQT 354 (427)
T ss_dssp SCTTSCCSSSEEEEECSSH------HHHHHHHHHHHH
T ss_pred CCCCCCCceEEEEEeCCCH------HHHHHHHHHhcc
Confidence 4322 22455555432 356788887765
No 234
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=93.49 E-value=0.099 Score=40.18 Aligned_cols=94 Identities=7% Similarity=-0.015 Sum_probs=56.9
Q ss_pred CCCceeEEEEEecCHHHHHHHHHhhcc--cC--C-ChHH-HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 042816 3 SLPGFRISVIYSYNNSVLAAAKKLARF--SS--V-SAPS-QNLLVSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLG 76 (163)
Q Consensus 3 ~~~G~RiG~~i~~~~~~~~~~~~~~~~--~~--~-s~~~-q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 76 (163)
+++| ||+++ ++++++.+...... .+ . .++. +.++...+ ..+....+...++..++.+.|+++|
T Consensus 240 ~~~G---G~v~~-~~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l-------~~~~~~~~~~~~~a~~l~~~L~~~g 308 (431)
T 3ht4_A 240 VKTG---GYIVG-KEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGF-------FLAPHVAGQALKGAIFTAAFLEKLG 308 (431)
T ss_dssp CSSC---EEEEE-CHHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCce---EEEEe-cHHHHHHHHHHhccCCcccccCccHHHHHHHHhHh-------hhHHHHHHHHHHHHHHHHHHHHhCc
Confidence 3556 99999 99999999875542 11 1 1111 22222211 2234556677788899999999988
Q ss_pred CccccC----CceeEEEeecCCcccCCChhhHHHHHHHHHH
Q 042816 77 IECAKS----NGGFYCWADMSGLISSYSEKGELELWDKLLN 113 (163)
Q Consensus 77 ~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 113 (163)
+++.+. ..++.+.+.++.. ....++++.|.+
T Consensus 309 ~~v~p~~~~~~~~li~~i~l~~~------~~~~~~~~~l~~ 343 (431)
T 3ht4_A 309 MNTSPAWNAPRTDLIQSVQFDDK------DRMIAFCQAIQY 343 (431)
T ss_dssp CCEESCTTSCCSSSCCEEECCCH------HHHHHHHHHHHH
T ss_pred CEecCCCCCCCccEEEEEEeCCH------HHHHHHHHHHHh
Confidence 777432 2223445556532 356788888766
No 235
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=84.01 E-value=3.2 Score=34.16 Aligned_cols=48 Identities=10% Similarity=0.110 Sum_probs=27.7
Q ss_pred hHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEec-CChhHHHHHHHHHHHHHH
Q 042816 103 GELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTL-LTEKDIHVVMERIRRISQ 157 (163)
Q Consensus 103 ~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~~l~~~~~~l~~~~~ 157 (163)
+...+.++|. ++||.+--.+ ..++-+-++. .+.+++...++.|.++-+
T Consensus 510 ~g~~~~~~L~-~~~I~~E~~d------~~~vl~l~s~g~~~~~~~~L~~aL~~~~~ 558 (715)
T 3n75_A 510 PASIVAKYLD-EHGIVVEKTG------PYNLLFLFSIGIDKTKALSLLRALTDFKR 558 (715)
T ss_dssp CHHHHHHHHH-HTTCCCSEEE------TTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHH-HCCCEEEecC------CCcEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 5567888775 4799875332 3334443332 266666666666665544
No 236
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=69.57 E-value=9.6 Score=19.59 Aligned_cols=30 Identities=13% Similarity=0.067 Sum_probs=24.3
Q ss_pred ceEEEEEecCChhHHHHHHHHHHHHHHHhh
Q 042816 131 GWFSFSFTLLTEKDIHVVMERIRRISQTCK 160 (163)
Q Consensus 131 ~~iRi~~~~~~~~~l~~~~~~l~~~~~~~~ 160 (163)
..+|||+..-+..+-+++...+.+++.++.
T Consensus 2 ervrisitartkkeaekfaailikvfaelg 31 (62)
T 2gjh_A 2 ERVRISITARTKKEAEKFAAILIKVFAELG 31 (62)
T ss_dssp CEEEEEEECSSHHHHHHHHHHHHHHHHHTT
T ss_pred ceEEEEEEecchhHHHHHHHHHHHHHHHhC
Confidence 468999987677788888888888888764
No 237
>2yh5_A DAPX protein, BAMC; lipid binding protein, lipoprotein, BAM complex; 1.25A {Escherichia coli} PDB: 3sns_A
Probab=51.04 E-value=43 Score=20.93 Aligned_cols=91 Identities=14% Similarity=0.189 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHhhhcCCcc---ccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCC-C-CCCceEEE
Q 042816 61 LRRLYVKFVAGLRQLGIEC---AKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCH-C-IEPGWFSF 135 (163)
Q Consensus 61 ~~~~~~~l~~~l~~~g~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~-~-~~~~~iRi 135 (163)
|.+..+.+-.+|.+.|+++ ..+.|-||+=..-| + ..|+..|-. ...-..++...- . ...+.-+|
T Consensus 23 fdraW~rvg~ALdr~Gf~V~Drdrs~G~y~V~Y~~~---------~-~gf~~~lg~-~~~~~~~~~Y~i~v~~~g~~t~V 91 (127)
T 2yh5_A 23 FNVVWQRLPAALEKVGMKVTDSTRSQGNMAVTYKPL---------S-DSDWQELGA-SDPGLASGDYKLQVGDLDNRSSL 91 (127)
T ss_dssp HHHHHHHHHHHHHHTTEEEEEEEGGGTEEEEEECCC---------C-HHHHHHHTS-CCCCCCSEEEEEEEEEETTEEEE
T ss_pred HHHHHHHHHHHHHhCCCeEEeeeccCeEEEEEeCCC---------C-cchHHHhcC-CCccCCCCCEEEEEEeCCCceEE
Confidence 4455677888899999777 35677666543323 2 356665632 221111111110 0 01234566
Q ss_pred EEec-----CChhHHHHHHHHHHHHHHHhhhc
Q 042816 136 SFTL-----LTEKDIHVVMERIRRISQTCKSH 162 (163)
Q Consensus 136 ~~~~-----~~~~~l~~~~~~l~~~~~~~~~~ 162 (163)
.+.. .+.+..+..+..|.+.+.++.|+
T Consensus 92 ~v~d~~G~p~~~~~a~~ll~~L~~~l~~~~~~ 123 (127)
T 2yh5_A 92 QFIDPKGHTLTQSQNDALVAVFQAAFSKLEHH 123 (127)
T ss_dssp EEECTTSCBCCHHHHHHHHHHHHHHHHHHC--
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence 6653 35578888999999988887664
No 238
>2a1v_A Conserved hypothetical protein; structural genomics, PSI, protein structure initiative; 2.15A {Deinococcus radiodurans} SCOP: d.198.3.1
Probab=49.06 E-value=44 Score=21.29 Aligned_cols=45 Identities=11% Similarity=0.235 Sum_probs=29.3
Q ss_pred HHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEe-cCChhHHHHHHHHH
Q 042816 106 ELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFT-LLTEKDIHVVMERI 152 (163)
Q Consensus 106 ~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~-~~~~~~l~~~~~~l 152 (163)
+....|.+..+=.+.||..+.. .+|+-|.+. .++++++.+.++.=
T Consensus 66 e~~~~L~~~~~~~i~PayhmnK--~hWvsV~Ld~~v~~~el~elI~~S 111 (144)
T 2a1v_A 66 ERGEELRQAHPQSIAPGYHLNK--KHWVTVTLDGTVPAELLGELLRGS 111 (144)
T ss_dssp HHHHHHHHHSTTTEEECTTSCT--TTEEEEECSSSSCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCeEecCCccCC--CeEEEEEcCCCCCHHHHHHHHHHH
Confidence 4555576666511368776653 789999986 46777777666543
No 239
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=45.16 E-value=41 Score=19.08 Aligned_cols=31 Identities=13% Similarity=0.065 Sum_probs=25.2
Q ss_pred CceEEEEEecCChhHHHHHHHHHHHHHHHhh
Q 042816 130 PGWFSFSFTLLTEKDIHVVMERIRRISQTCK 160 (163)
Q Consensus 130 ~~~iRi~~~~~~~~~l~~~~~~l~~~~~~~~ 160 (163)
...+|||+..-+..+-+++...+.+++.++.
T Consensus 45 akrvrisitartkkeaekfaailikvfaelg 75 (106)
T 1qys_A 45 AKRVRISITARTKKEAEKFAAILIKVFAELG 75 (106)
T ss_dssp CSEEEEEEECSSHHHHHHHHHHHHHHHHHTT
T ss_pred CcEEEEEEEecchhHHHHHHHHHHHHHHHhC
Confidence 5689999987677788888888888887764
No 240
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=45.03 E-value=26 Score=19.61 Aligned_cols=45 Identities=11% Similarity=0.265 Sum_probs=30.6
Q ss_pred hhHHHHHHHHHHhcCeE--EcCCCCCCCCCCceEEEEEecC-ChhHHHHHHHHHHH
Q 042816 102 KGELELWDKLLNVAKVN--VTPGSSCHCIEPGWFSFSFTLL-TEKDIHVVMERIRR 154 (163)
Q Consensus 102 ~~~~~~~~~l~~~~gi~--v~pg~~f~~~~~~~iRi~~~~~-~~~~l~~~~~~l~~ 154 (163)
.++..+...|.. .|+. |.+ ...+.|+-+++. +.++.+.+..+|++
T Consensus 21 ~~A~~l~~~L~~-~G~~a~i~~-------~~~~yRV~vGpf~s~~~A~~~~~~L~~ 68 (81)
T 1uta_A 21 EQAETVRAQLAF-EGFDSKITT-------NNGWNRVVIGPVKGKENADSTLNRLKM 68 (81)
T ss_dssp HHHHHHHHHHHH-HTCCEEEEE-------CSSSEEEEESSCBTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CCCCeEEEe-------CCcEEEEEECCcCCHHHHHHHHHHHHH
Confidence 477888888876 5643 332 256778888753 66777777777765
No 241
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=42.73 E-value=45 Score=24.10 Aligned_cols=46 Identities=7% Similarity=-0.016 Sum_probs=28.5
Q ss_pred HHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHHHh
Q 042816 105 LELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQTC 159 (163)
Q Consensus 105 ~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~~ 159 (163)
..+.+ +++++|+.++.-..| + ++++..+++..+.+++.|.+.++..
T Consensus 106 ~~~~~-~~~~~gi~i~~H~py-------~-iNL~S~~~e~re~Si~~l~~~l~~a 151 (301)
T 2j6v_A 106 ARLGA-LARAFGQRLSMHPGQ-------Y-VNPGSPDPEVVERSLAELRYSARLL 151 (301)
T ss_dssp HHHHH-HHHHTTCEEEECCCT-------T-CCTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHHcCCeEEEeCch-------h-hcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 34444 556689876653222 2 4565546677788888888776643
No 242
>3ih6_A Putative zinc protease; bordetella pertussis tohama I, struc genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 2.15A {Bordetella pertussis} PDB: 3ivl_A
Probab=39.34 E-value=30 Score=22.55 Aligned_cols=55 Identities=16% Similarity=0.201 Sum_probs=34.6
Q ss_pred HHHHHHHHHhcCeEEcCCCCCC-CCCCceEEEEEecCChh-HHHHHHHHHHHHHHHhhh
Q 042816 105 LELWDKLLNVAKVNVTPGSSCH-CIEPGWFSFSFTLLTEK-DIHVVMERIRRISQTCKS 161 (163)
Q Consensus 105 ~~~~~~l~~~~gi~v~pg~~f~-~~~~~~iRi~~~~~~~~-~l~~~~~~l~~~~~~~~~ 161 (163)
-.+.+.|.+ .|+.-..++.+. ....+.+-++... +.+ +.+++++.+.+.+++++.
T Consensus 57 SrL~~~lre-~gl~y~~~~~~~~~~~~g~~~i~~~~-~~~~~~~~~~~~i~~~l~~l~~ 113 (197)
T 3ih6_A 57 SRLYHALVP-TKLASGVFGFTMDQLDPGLAMFGAQL-QPGMDQDKALQTLTATLESLSS 113 (197)
T ss_dssp SHHHHHHTT-TTSCSEEEEEEETTSSSCEEEEEEEC-CTTSCHHHHHHHHHHHHHCTTT
T ss_pred chHHHHHHh-cCceEEEEeccccccCCeEEEEEEEE-CCCCCHHHHHHHHHHHHHHHHh
Confidence 356666665 354433222222 1236788888876 555 589999999888877654
No 243
>1s28_A ORF1; type III chaperone; 3.00A {Pseudomonas syringae PV} SCOP: d.198.1.1
Probab=37.83 E-value=75 Score=19.95 Aligned_cols=59 Identities=17% Similarity=0.164 Sum_probs=38.6
Q ss_pred hHHHHHHHHHHhcCeEEc-CCCCCCCCCCc----eEEEEEecCChhHHHHHHHHHHHHHHHhhh
Q 042816 103 GELELWDKLLNVAKVNVT-PGSSCHCIEPG----WFSFSFTLLTEKDIHVVMERIRRISQTCKS 161 (163)
Q Consensus 103 ~~~~~~~~l~~~~gi~v~-pg~~f~~~~~~----~iRi~~~~~~~~~l~~~~~~l~~~~~~~~~ 161 (163)
.+.+....|+..+...++ |.-.|+..... +.|+.+..++.+++.+..+.+...-.+.++
T Consensus 64 ~~~d~l~~lL~~N~FSl~kPf~t~Gld~~~~~vlh~R~pL~El~~v~mr~vFE~l~~~A~~ikk 127 (132)
T 1s28_A 64 LDSNACQSLLRLNEFNLRTPFFTVGLNEKKDGVVHTRIPLLNLDNVEMRRVFEALLNLSGEVKK 127 (132)
T ss_dssp CHHHHHHHHHTTTCCCCCSSCCEEEECTTSEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cChHHHHHHHHhcCcccCCCeEEEEecCCCceEEEeccChHhcccHHHHHHHHHHHHHHHHHHH
Confidence 455666667775677665 55555644332 667777767778888888887776655554
No 244
>2kfp_A Pspto_3016 protein; alpha, beta, double-WING, structural genomics, PSI-2, protein structure initiative; NMR {Pseudomonas syringae} PDB: 3h9x_A
Probab=36.53 E-value=47 Score=20.56 Aligned_cols=42 Identities=24% Similarity=0.385 Sum_probs=27.3
Q ss_pred HHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEe-cCChhHHHHHHHH
Q 042816 106 ELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFT-LLTEKDIHVVMER 151 (163)
Q Consensus 106 ~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~-~~~~~~l~~~~~~ 151 (163)
+.+..|.+..| +.||..... ..|+-|.+. .++++++.+.++.
T Consensus 69 e~~~~Lr~~~~--i~PayhmnK--~hWisv~Ld~~v~d~~i~~lI~~ 111 (125)
T 2kfp_A 69 ELVGSLRKKPG--IYPAYHMNK--EHWITVLLNGPLGAKEIHSLIED 111 (125)
T ss_dssp TTHHHHHHSTT--EEECSSSCS--SSEEEEETTTTCCHHHHHHHHHH
T ss_pred HHHHHHHhCCC--CCccccCCC--CCeEEEEcCCCCCHHHHHHHHHH
Confidence 33444555556 568766553 789999985 3577776666654
No 245
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=35.89 E-value=1e+02 Score=24.28 Aligned_cols=44 Identities=11% Similarity=0.209 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHHHhh
Q 042816 103 GELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQTCK 160 (163)
Q Consensus 103 ~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~~~ 160 (163)
++.+..+.|++ .|+-| +|++|+.-+.|+-.+-++.++++-+++.
T Consensus 33 ~~~e~l~~Li~-aGmnv-------------~RlNfSHG~~e~h~~~i~~iR~~~~~~g 76 (499)
T 3hqn_D 33 QSVEALKGLIQ-SGMSV-------------ARMNFSHGSHEYHQTTINNVRQAAAELG 76 (499)
T ss_dssp CSHHHHHHHHH-HTEEE-------------EEEETTSSCHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHH-cCCCE-------------EEEECCCCCHHHHHHHHHHHHHHHHHhC
Confidence 45666667877 67664 6999998788999999999998877764
No 246
>2ctj_A Vigilin; K homology type I domain, RNA-binding, cell sterol metabolism, beta-alpha-alpha-beta-BETA-alpha structure, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=33.75 E-value=73 Score=18.63 Aligned_cols=50 Identities=6% Similarity=0.109 Sum_probs=32.1
Q ss_pred HHHHHHhc-CeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHHHhhhc
Q 042816 108 WDKLLNVA-KVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQTCKSH 162 (163)
Q Consensus 108 ~~~l~~~~-gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~~~~~ 162 (163)
.+.+.++. |+.+. |...+.+.=++.+.. +.+.++.|.++|.+++.+...+
T Consensus 39 Ir~I~eetggv~I~----i~~~g~~~~~V~I~G-~~~~v~~A~~~I~~iv~e~e~~ 89 (95)
T 2ctj_A 39 IRSIMEECGGVHIH----FPVEGSGSDTVVIRG-PSSDVEKAKKQLLHLAEEKQTK 89 (95)
T ss_dssp HHHHHHHHTSCEEE----CCCTTTTCCEEEEES-CHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHcCCCEEE----eCCCCCCcceEEEEc-CHHHHHHHHHHHHHHHhhhhhc
Confidence 34455557 77774 222222333566666 5669999999999998876543
No 247
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=33.38 E-value=45 Score=23.37 Aligned_cols=70 Identities=14% Similarity=0.187 Sum_probs=44.1
Q ss_pred HHHHHHHhhhcCCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCC---CCCceEEEEEecCC
Q 042816 65 YVKFVAGLRQLGIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHC---IEPGWFSFSFTLLT 141 (163)
Q Consensus 65 ~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~---~~~~~iRi~~~~~~ 141 (163)
...+.++..+.|+ +..|.|| +++. +-.++.+.+++ .||--.=-.-|.. ...+. + .
T Consensus 176 ~~avAka~a~~g~-~lEPTGG----Idl~---------N~~~I~~i~l~-aGv~~viPHIYssIIDk~TG~------T-r 233 (249)
T 3m0z_A 176 FEAVAKACAAHDF-WLEPTGG----IDLE---------NYSEILKIALD-AGVSKIIPHIYSSIIDKASGN------T-R 233 (249)
T ss_dssp HHHHHHHHHHTTC-EEEEBSS----CCTT---------THHHHHHHHHH-HTCSCBCCBCCGGGBCTTTCC------B-C
T ss_pred HHHHHHHHHHcCc-eECCCCC----ccHh---------hHHHHHHHHHH-cCCCeecccccceeccCCCCC------C-C
Confidence 4556677777788 8889998 6776 44778887877 7876332223332 11221 2 5
Q ss_pred hhHHHHHHHHHHHHH
Q 042816 142 EKDIHVVMERIRRIS 156 (163)
Q Consensus 142 ~~~l~~~~~~l~~~~ 156 (163)
.|++.+.+..+++.+
T Consensus 234 pedV~~ll~~~K~l~ 248 (249)
T 3m0z_A 234 PADVRQLLEMTKQLV 248 (249)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhh
Confidence 678787777776643
No 248
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=32.52 E-value=1.2e+02 Score=20.78 Aligned_cols=49 Identities=14% Similarity=0.299 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHHH
Q 042816 104 ELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 104 ~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~ 158 (163)
...+...+.+ -++.+.|-. ....||+.+..++.|.=.+.++..++..++
T Consensus 99 i~~IekAI~~-S~LglnP~~-----dG~~Iri~iP~LTeErRkelvK~ak~~~E~ 147 (209)
T 4gfq_A 99 IGDIEKAILK-ADLGLNPSN-----DGTVIRIAFPALTEERRRDLVKVVKKYAEE 147 (209)
T ss_dssp HHHHHHHHHH-HTSSCCCEE-----CSSCEEEECCBCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCCCCCCc-----CCCceeeeCCCccHHHHHHHHHHHHHHHHH
Confidence 3444454444 678777732 256899999988887766666666655443
No 249
>3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125}
Probab=32.12 E-value=38 Score=25.05 Aligned_cols=31 Identities=6% Similarity=0.124 Sum_probs=24.9
Q ss_pred CceEEEEEecCChhHHHHHHHHHHHHHHHhhh
Q 042816 130 PGWFSFSFTLLTEKDIHVVMERIRRISQTCKS 161 (163)
Q Consensus 130 ~~~iRi~~~~~~~~~l~~~~~~l~~~~~~~~~ 161 (163)
.+.+.+.... +.++.+++++.+.+.+++++.
T Consensus 293 ~g~~~i~~~~-~~~~~~~~~~~i~~~l~~l~~ 323 (421)
T 3hdi_A 293 SGMLTIYAGT-GHDQLDDLVYSIQETTSALAE 323 (421)
T ss_dssp CEEEEEEEEE-EGGGHHHHHHHHHHHHHHHHT
T ss_pred CceEEEEEEe-CHHHHHHHHHHHHHHHHHHHh
Confidence 5778888776 667899999999988887754
No 250
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=32.11 E-value=1.2e+02 Score=23.60 Aligned_cols=44 Identities=16% Similarity=0.229 Sum_probs=33.4
Q ss_pred hHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHHHhh
Q 042816 103 GELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQTCK 160 (163)
Q Consensus 103 ~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~~~ 160 (163)
++.+..+.|++ .|+- -+|++|+.-+.++-.+-++.++++-+++.
T Consensus 15 ~~~e~l~~li~-aGm~-------------v~RlNfsHg~~e~h~~~i~~iR~~~~~~~ 58 (470)
T 1e0t_A 15 ESEEMLAKMLD-AGMN-------------VMRLNFSHGDYAEHGQRIQNLRNVMSKTG 58 (470)
T ss_dssp CSHHHHHHHHH-HTEE-------------EEEEETTSSCHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHH-cCCC-------------EEEEECCCCCHHHHHHHHHHHHHHHHhcC
Confidence 44566666776 6655 47999998788888999999998877654
No 251
>2fki_A Protein YJBR; NESG, GFT-alpha-beta, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; NMR {Escherichia coli} SCOP: d.198.3.1
Probab=31.75 E-value=92 Score=19.17 Aligned_cols=44 Identities=18% Similarity=0.239 Sum_probs=29.0
Q ss_pred HHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEe-cCChhHHHHHHHH
Q 042816 105 LELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFT-LLTEKDIHVVMER 151 (163)
Q Consensus 105 ~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~-~~~~~~l~~~~~~ 151 (163)
.+.+..|.+..+= +.||..+.. .+|+-|.+. .++++++.+.++.
T Consensus 54 pe~~~~L~~~~~~-i~PayhmnK--~hWisv~ld~~v~~~~l~~lI~~ 98 (126)
T 2fki_A 54 PELAELLRQQHSD-VRPSRHLNK--AHWSTVYLDGSLPDSQIYYLVDA 98 (126)
T ss_dssp HHHHHHHHHSCST-TCCCCSSCT--TTEEEEECTTTSCHHHHHHHHHH
T ss_pred HHHHHHHHhhCCC-eecCCcCCC--ceeEEEEcCCCCCHHHHHHHHHH
Confidence 4555667775541 468766553 789999985 3577777766654
No 252
>3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens}
Probab=31.55 E-value=43 Score=24.78 Aligned_cols=31 Identities=6% Similarity=0.065 Sum_probs=24.5
Q ss_pred CceEEEEEecCChhHHHHHHHHHHHHHHHhhh
Q 042816 130 PGWFSFSFTLLTEKDIHVVMERIRRISQTCKS 161 (163)
Q Consensus 130 ~~~iRi~~~~~~~~~l~~~~~~l~~~~~~~~~ 161 (163)
.+.+.+.+.. +.++.+++++.+.+.+++++.
T Consensus 309 ~g~~~i~~~~-~~~~~~~~~~~i~~~l~~l~~ 339 (434)
T 3gwb_A 309 RGPFMINLQT-RAEMSEGTLKLVQDVFAEYLK 339 (434)
T ss_dssp CCEEEEEEEE-EGGGHHHHHHHHHHHHHHHHH
T ss_pred ceeEEEEEec-chhhHHHHHHHHHHHHHHHHh
Confidence 5788888876 667788889888888877654
No 253
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=31.40 E-value=49 Score=23.48 Aligned_cols=72 Identities=15% Similarity=0.242 Sum_probs=47.0
Q ss_pred HHHHHHHhhhcCCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEE-cCCCCCCC---CCCceEEEEEecC
Q 042816 65 YVKFVAGLRQLGIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNV-TPGSSCHC---IEPGWFSFSFTLL 140 (163)
Q Consensus 65 ~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v-~pg~~f~~---~~~~~iRi~~~~~ 140 (163)
...+.++..+.|+ +..|.|| +++. +-.++.+.+++ .||-- .| .-|.. ...+ ..
T Consensus 199 l~avAkAca~~g~-~lEPTGG----Idl~---------Nf~~I~~i~l~-aGv~~viP-HIYsSIIDk~TG-------~T 255 (275)
T 3m6y_A 199 YRAVAKACAEEGF-ALEPTGG----IDKE---------NFETIVRIALE-ANVEQVIP-HVYSSIIDKETG-------NT 255 (275)
T ss_dssp HHHHHHHHHHHTC-EEEEBSS----CCTT---------THHHHHHHHHH-TTCSCBCC-EECGGGBCTTTC-------CB
T ss_pred HHHHHHHHHHcCc-eECCCCC----ccHh---------HHHHHHHHHHH-cCCCeecc-cccceeccCCCC-------CC
Confidence 4456666666788 8889998 6776 44778887887 78763 33 22221 1121 12
Q ss_pred ChhHHHHHHHHHHHHHHHh
Q 042816 141 TEKDIHVVMERIRRISQTC 159 (163)
Q Consensus 141 ~~~~l~~~~~~l~~~~~~~ 159 (163)
..|++++.+..+++.+.++
T Consensus 256 rpedV~~ll~~~K~l~~~~ 274 (275)
T 3m6y_A 256 KVEAVRELLAVVKKLVDQY 274 (275)
T ss_dssp CHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHhhc
Confidence 6688899898888877643
No 254
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=30.49 E-value=1.3e+02 Score=24.25 Aligned_cols=44 Identities=23% Similarity=0.382 Sum_probs=34.1
Q ss_pred hHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHHHhh
Q 042816 103 GELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQTCK 160 (163)
Q Consensus 103 ~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~~~ 160 (163)
++.+..+.|++ .|+-+ +|++|+.-+.++-.+-++.++++-+++.
T Consensus 36 ~~~e~l~~li~-aGm~v-------------~RlNfSHg~~e~h~~~i~~iR~~~~~~~ 79 (606)
T 3t05_A 36 ESEEMIEKLIN-AGMNV-------------ARLNFSHGSHEEHKGRIDTIRKVAKRLD 79 (606)
T ss_dssp CSHHHHHHHHH-TTEEE-------------EEEETTSSCHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHH-cCCCE-------------EEEECCCCCHHHHHHHHHHHHHHHHHhC
Confidence 45666667776 66654 7999998788899999999998877654
No 255
>2yqr_A KIAA0907 protein; structure genomics, KH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.34 E-value=92 Score=19.17 Aligned_cols=27 Identities=7% Similarity=0.043 Sum_probs=20.1
Q ss_pred EEEEEecCChhHHHHHHHHHHHHHHHh
Q 042816 133 FSFSFTLLTEKDIHVVMERIRRISQTC 159 (163)
Q Consensus 133 iRi~~~~~~~~~l~~~~~~l~~~~~~~ 159 (163)
.++.+...+.+.+++|.+.|.+++...
T Consensus 74 l~V~I~a~~~e~i~~A~~~Ie~Ll~~v 100 (119)
T 2yqr_A 74 MYIYISHPKPEGLAAAKKLCENLLQTV 100 (119)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEeCCHHHHHHHHHHHHHHhhch
Confidence 345554448899999999999888654
No 256
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=29.27 E-value=76 Score=17.71 Aligned_cols=54 Identities=13% Similarity=-0.021 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHHH
Q 042816 104 ELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 104 ~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~ 158 (163)
-.++...+.+ +|+-+..-..+...+...+++.+...+.+.++...+.|.+..++
T Consensus 19 la~vt~~la~-~~~NI~~i~~~~~~~~~~~~i~v~~~~~~~l~~l~~~L~~~~~~ 72 (91)
T 1zpv_A 19 VAGVSGKIAE-LGLNIDDISQTVLDEYFTMMAVVSSDEKQDFTYLRNEFEAFGQT 72 (91)
T ss_dssp HHHHHHHHHH-TTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCCEEEEEeEEEcCEEEEEEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 4677776665 78887654444322334566666442335566666666655544
No 257
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A*
Probab=28.42 E-value=2.4e+02 Score=23.66 Aligned_cols=74 Identities=11% Similarity=0.164 Sum_probs=45.9
Q ss_pred HHHHHhhhcCCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHH
Q 042816 67 KFVAGLRQLGIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIH 146 (163)
Q Consensus 67 ~l~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~ 146 (163)
...+.+++.|++..+.-|| ...|. ..+.+ +.++.||+|-....|.... +.. +++-.+
T Consensus 356 ~~l~~~k~~g~N~iR~wgg----~~y~~----------~~~~d-~cD~~GilV~~e~~~~~~~-------~~~-~~~~~~ 412 (848)
T 2je8_A 356 TLFRDMKEANMNMVRIWGG----GTYEN----------NLFYD-LADENGILVWQDFMFACTP-------YPS-DPTFLK 412 (848)
T ss_dssp HHHHHHHHTTCCEEEECTT----SCCCC----------HHHHH-HHHHHTCEEEEECSCBSSC-------CCC-CHHHHH
T ss_pred HHHHHHHHcCCcEEEeCCC----ccCCC----------HHHHH-HHHHcCCEEEECcccccCC-------CCC-CHHHHH
Confidence 3445566778887776543 22332 35665 5566999997655554311 122 445567
Q ss_pred HHHHHHHHHHHHhhhcC
Q 042816 147 VVMERIRRISQTCKSHS 163 (163)
Q Consensus 147 ~~~~~l~~~~~~~~~~~ 163 (163)
...+.+++.+++++.|+
T Consensus 413 ~~~~~~~~~v~r~~nHP 429 (848)
T 2je8_A 413 RVEAEAVYNIRRLRNHA 429 (848)
T ss_dssp HHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHhcCCC
Confidence 77888888999988775
No 258
>3hlu_A Uncharacterized protein DUF2179; alpha-beta half sandwich, structural genomics, PSI-2, protei structure initiative; 2.65A {Eubacterium ventriosum}
Probab=28.23 E-value=94 Score=18.16 Aligned_cols=49 Identities=8% Similarity=0.003 Sum_probs=32.5
Q ss_pred hHHHHHHHHHH--hcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHH
Q 042816 103 GELELWDKLLN--VAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIR 153 (163)
Q Consensus 103 ~~~~~~~~l~~--~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~ 153 (163)
...++.+.+.+ .+|+.+.+|.+-+...+..+-+++. +..++.+..+.+.
T Consensus 17 ~~eeI~~~I~~~l~rGvT~~~g~G~Ys~~~~~vl~~Vv--~r~e~~~l~~~I~ 67 (96)
T 3hlu_A 17 KRKIIADRMLQELDLGVTMLQAVGAYKNNETEVIMCVM--RKATLVKVRNLLK 67 (96)
T ss_dssp THHHHHHHHHHHSCCCCEEEECEESSSSSCCEEEEEEE--CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhcCCCEEEEEEEEcccCCCEEEEEEEe--cHHHHHHHHHHHH
Confidence 34677777764 3699999988765555667777776 5566555555544
No 259
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=27.59 E-value=83 Score=20.48 Aligned_cols=24 Identities=13% Similarity=0.236 Sum_probs=17.6
Q ss_pred CCCCceeEEEEEec-CHHHHHHHHH
Q 042816 2 LSLPGFRISVIYSY-NNSVLAAAKK 25 (163)
Q Consensus 2 ~~~~G~RiG~~i~~-~~~~~~~~~~ 25 (163)
+..+|+|+|.+++. |.++.+.+..
T Consensus 8 ~~~~~~ri~IV~arfn~~I~~~Ll~ 32 (156)
T 3nq4_A 8 VAAPDARVAITIARFNQFINDSLLD 32 (156)
T ss_dssp SCCTTCCEEEEEESTTHHHHHHHHH
T ss_pred cCCCCCEEEEEEeeCcHHHHHHHHH
Confidence 55689999999994 7776665543
No 260
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=27.56 E-value=1.5e+02 Score=23.87 Aligned_cols=44 Identities=14% Similarity=0.174 Sum_probs=33.2
Q ss_pred hHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHHHhh
Q 042816 103 GELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQTCK 160 (163)
Q Consensus 103 ~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~~~ 160 (163)
++.+..+.|++ .|+- .+|++|+.-+.++-.+-++.++++-+++.
T Consensus 16 ~~~~~l~~l~~-aGm~-------------v~RlNfsHg~~~~h~~~i~~ir~~~~~~~ 59 (587)
T 2e28_A 16 ESVDKLVQLME-AGMN-------------VARLNFSHGDHEEHGRRIANIREAAKRTG 59 (587)
T ss_dssp CSHHHHHHHHH-HTEE-------------EEEEETTSSCHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHH-cCCC-------------EEEEECCCCCHHHHHHHHHHHHHHHHHhC
Confidence 44566666776 5665 47999998788889999999998876654
No 261
>3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis}
Probab=27.17 E-value=59 Score=23.87 Aligned_cols=31 Identities=13% Similarity=0.206 Sum_probs=24.6
Q ss_pred CceEEEEEecCChhHHHHHHHHHHHHHHHhhh
Q 042816 130 PGWFSFSFTLLTEKDIHVVMERIRRISQTCKS 161 (163)
Q Consensus 130 ~~~iRi~~~~~~~~~l~~~~~~l~~~~~~~~~ 161 (163)
.+.+-+.+.. +.++++++++.+.+.+++++.
T Consensus 312 ~g~~~i~~~~-~~~~~~~~~~~~~~~l~~l~~ 342 (425)
T 3d3y_A 312 RGFMTVQTGI-DGKNRNQVLRLISTELENIRL 342 (425)
T ss_dssp TTEEEEEEEE-CGGGHHHHHHHHHHHHHHHHT
T ss_pred CceEEEEEec-CHhhHHHHHHHHHHHHHHHHc
Confidence 5677787776 778899999999888887654
No 262
>3m05_A Uncharacterized protein PEPE_1480; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 3.15A {Pediococcus pentosaceus}
Probab=27.05 E-value=78 Score=19.40 Aligned_cols=51 Identities=24% Similarity=0.280 Sum_probs=35.6
Q ss_pred hHHHHHHHHHHhcCeEEcCCC---CCCCCCCceEEEEEecCChhHHHHHHHHHHHHHH
Q 042816 103 GELELWDKLLNVAKVNVTPGS---SCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQ 157 (163)
Q Consensus 103 ~~~~~~~~l~~~~gi~v~pg~---~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~ 157 (163)
+..++.+.|.+ .|+..+.-+ +|+. .+..++-+.. +++++++.++.|.+..+
T Consensus 17 kld~V~~AL~~-~G~~~t~v~~~gGf~r--~g~~~leivV-~De~Vd~vi~~I~~~a~ 70 (114)
T 3m05_A 17 DANYLSDQFID-QNVRATKLSTTGGFLQ--SGNTTFMIGI-EEERVPEVLEIIKKASH 70 (114)
T ss_dssp HHHHHHHHHHH-TTCCEEEEEEEETTTT--EEEEEEEEEE-EGGGHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHH-CCCCEEEEEEeccccc--cCCEEEEEEE-cHHHHHHHHHHHHHHcC
Confidence 55677777765 787754322 3332 4567888876 88999999999988764
No 263
>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas}
Probab=26.95 E-value=60 Score=23.91 Aligned_cols=55 Identities=9% Similarity=0.056 Sum_probs=31.9
Q ss_pred HHHHHHHHhcCeEEcCCCCCCC-CCCceEEEEEecCChhHHHHHHHHHHHHHHHhhh
Q 042816 106 ELWDKLLNVAKVNVTPGSSCHC-IEPGWFSFSFTLLTEKDIHVVMERIRRISQTCKS 161 (163)
Q Consensus 106 ~~~~~l~~~~gi~v~pg~~f~~-~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~~~~ 161 (163)
.+.+.|.++.|..-..+..+.. .+.+.+.+.+.. +.++.+++++.+.+.+++++.
T Consensus 277 rL~~~lR~~~gl~y~v~~~~~~~~~~g~~~i~~~~-~~~~~~~~~~~i~~~l~~l~~ 332 (424)
T 3amj_B 277 RLMKEIRDKRGLSYGAYSYFSPQKSMGLFQIGFET-RAEKADEAVQVANDTLDAFLR 332 (424)
T ss_dssp HHHHHHTTTTCCEEEEEEEECCBSSCEEEEEEEEE-ESTTHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHhCCeEEEeeeeeccCCCceeEEEEEEe-CcccHHHHHHHHHHHHHHHHh
Confidence 3555555434443222222221 235778888776 556788888888888776653
No 264
>3pg6_A E3 ubiquitin-protein ligase DTX3L; DNA-damage, metal-binding, nucleus, phosphorylation, chromatin regulator, UBL conjugation pathway, zinc-finger; HET: CIT; 1.70A {Homo sapiens}
Probab=26.70 E-value=72 Score=20.83 Aligned_cols=33 Identities=18% Similarity=0.247 Sum_probs=24.7
Q ss_pred CCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHHH
Q 042816 121 PGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 121 pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~ 158 (163)
||..|. +.-|.++.. +.++=.+.+..|+.++++
T Consensus 70 PGk~y~----G~~R~AYLP-dn~eGr~VL~LL~~AF~~ 102 (159)
T 3pg6_A 70 PGKRYP----GIQRTAYLP-DNKEGRKVLKLLYRAFDQ 102 (159)
T ss_dssp TTCEEC----CEEEEEEEE-ESHHHHHHHHHHHHHHHT
T ss_pred CCCccC----CCCeEEECC-CCHHHHHHHHHHHHHHHc
Confidence 454444 678999997 666778888888888764
No 265
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=26.30 E-value=1.6e+02 Score=23.28 Aligned_cols=43 Identities=12% Similarity=0.149 Sum_probs=31.9
Q ss_pred hHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHHHh
Q 042816 103 GELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQTC 159 (163)
Q Consensus 103 ~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~~ 159 (163)
++.+..+.|++ .|+- -+|++|+.-+.++-.+-++.++++.+++
T Consensus 49 ~~~e~l~~li~-aGm~-------------v~RlNfSHg~~e~h~~~i~~iR~~~~~~ 91 (511)
T 3gg8_A 49 WNVDTLVKMID-AGMN-------------VCRLNFSHGDHETHARTVQNIQEAMKQR 91 (511)
T ss_dssp CSHHHHHHHHH-HTEE-------------EEEEETTSSCHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHH-cCCC-------------EEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence 34455555665 5554 4799999878888999999999887765
No 266
>2nvn_A Hypothetical protein; structural genomics, PSI- protein structure initiative, joint center for structural G JCSG; 2.50A {Synechococcus elongatus} SCOP: d.18.1.3
Probab=26.08 E-value=27 Score=21.81 Aligned_cols=7 Identities=29% Similarity=0.753 Sum_probs=5.1
Q ss_pred CceeEEE
Q 042816 5 PGFRISV 11 (163)
Q Consensus 5 ~G~RiG~ 11 (163)
+|+|+||
T Consensus 10 ~GWRLgw 16 (122)
T 2nvn_A 10 AGWRLGW 16 (122)
T ss_dssp TTEEEEE
T ss_pred CCeEEEE
Confidence 5777777
No 267
>1kaf_A Transcription regulatory protein MOTA; escherichia coli, X-RAY crystallography, protein-DNA interactions, structural genomics; 1.60A {Enterobacteria phage T4} SCOP: d.199.1.1
Probab=25.04 E-value=87 Score=18.98 Aligned_cols=27 Identities=15% Similarity=0.529 Sum_probs=20.0
Q ss_pred HHHHHhhhcCCccccCCceeEEEeecCC
Q 042816 67 KFVAGLRQLGIECAKSNGGFYCWADMSG 94 (163)
Q Consensus 67 ~l~~~l~~~g~~~~~~~~g~~~~~~~~~ 94 (163)
-..+.|.++|.++....|| +.++|++.
T Consensus 67 ~~~~~f~slGm~~K~~~~g-NtYiDi~~ 93 (108)
T 1kaf_A 67 HHIQKFTDIGMSCKIAKNG-NVYLDIKR 93 (108)
T ss_dssp HHHHHHHTTTCEEEECTTS-EEEEEEEC
T ss_pred HHHHHHHhcCceEEEcCCC-cEEEeccc
Confidence 4567788888777765577 88888885
No 268
>2plg_A TLL0839 protein; hypothetical, uncharacterized, DUF1821, NYSGXRC, PSI-2, structural genomics, protein structure initiative; 2.60A {Synechococcus elongatus} SCOP: d.198.1.2
Probab=23.98 E-value=1.6e+02 Score=19.32 Aligned_cols=55 Identities=16% Similarity=0.131 Sum_probs=35.9
Q ss_pred hhHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEE----ecCChhHHHHHHHHHHHHHHH
Q 042816 102 KGELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSF----TLLTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 102 ~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~----~~~~~~~l~~~~~~l~~~~~~ 158 (163)
.+...|.++||+ .+-.-+-+..|+-. .+.+=+.+ +.++.+++..++.++...-.+
T Consensus 86 ~~~~~l~~~LLE-~N~~~t~~arFaI~-~n~V~~v~~r~ls~Ld~~E~~~aIt~V~~lAD~ 144 (163)
T 2plg_A 86 ADELALYRKLLT-LNWLTTFEAHFAIA-EEQVQVVASRTLGGITAGEISRLITIVATLADD 144 (163)
T ss_dssp TTHHHHHHHHHH-HTTTTTTTCEEEEE-TTEEEEEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHH-hccccccceEEEEE-CCEEEEEEEEEcccCCHHHHHHHHHHHHHHHHH
Confidence 368999999998 55554445556533 24443333 346889999999888765433
No 269
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=23.58 E-value=1.7e+02 Score=19.56 Aligned_cols=49 Identities=14% Similarity=0.281 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHHH
Q 042816 104 ELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 104 ~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~ 158 (163)
...-....+.. ++.+.|-. ....||+.+..+++|.=.+.++..+...++
T Consensus 77 ~i~~IekAI~~-dLglnP~~-----dG~~Iri~iP~lTeErRkelvK~~k~~~E~ 125 (184)
T 1ge9_A 77 AVPAIEKAIRE-ELNLNPTV-----QGNVIRVTLPPLTEERRRELVRLLHKITEE 125 (184)
T ss_dssp HHHHHHHHHHH-HHCSCCEE-----ETTEEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-CCCCCccc-----CCCEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 34444444555 77777741 256999999887887766666666655543
No 270
>1ei7_A Coat protein; disordered loops, viral protein; 2.45A {Tobacco mosaic virus} SCOP: a.24.5.1 PDB: 2om3_A 2tmv_P 2xea_A 3j06_A 1vtm_P
Probab=23.42 E-value=96 Score=20.16 Aligned_cols=38 Identities=13% Similarity=0.064 Sum_probs=25.9
Q ss_pred HHHHhhhc-CCccccCCceeEEEeecCCcccCCChhhHHHHHHHHHHh
Q 042816 68 FVAGLRQL-GIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLLNV 114 (163)
Q Consensus 68 l~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 114 (163)
+...++.. ..++.-|+++|++|..-+. -..++..|++.
T Consensus 48 ~~~~~~~v~~~t~RFP~~~f~V~~~~~~---------l~pl~~aLl~a 86 (158)
T 1ei7_A 48 FSEVWKPSPQVTVRFPDSDFKVYRYNAV---------LDPLVTALLGA 86 (158)
T ss_dssp HHHTCBCCCBTTBCCCSSCCEEETTCTT---------HHHHHHHHHHH
T ss_pred HHhhccccCCcceecCCcceEEEecCch---------HHHHHHHHHHh
Confidence 34444444 4677779999999987663 46777777763
No 271
>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C
Probab=23.31 E-value=91 Score=23.23 Aligned_cols=31 Identities=13% Similarity=0.146 Sum_probs=22.4
Q ss_pred CceEEEEEecCChh-HHHHHHHHHHHHHHHhhh
Q 042816 130 PGWFSFSFTLLTEK-DIHVVMERIRRISQTCKS 161 (163)
Q Consensus 130 ~~~iRi~~~~~~~~-~l~~~~~~l~~~~~~~~~ 161 (163)
.+.+-+++.. .++ +.+++++.+.+.+++++.
T Consensus 309 ~g~~~i~~~~-~~~~~~~~~~~~i~~~l~~l~~ 340 (445)
T 3ami_A 309 QGLFILEGVP-SKGVTIAQLETDLRAQVRDIAA 340 (445)
T ss_dssp CEEEEEEEEE-CTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEE-CCCCCHHHHHHHHHHHHHHHHh
Confidence 4677787766 444 488888888888877654
No 272
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=23.31 E-value=1e+02 Score=19.81 Aligned_cols=41 Identities=20% Similarity=0.394 Sum_probs=17.3
Q ss_pred HHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCce
Q 042816 41 VSMLSDTKFVQKFININRERLRRLYVKFVAGLRQLGIECAKSNGG 85 (163)
Q Consensus 41 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g 85 (163)
.-.+++...++++.++-++.+++ ..+.+.+.|.++.-.+.|
T Consensus 41 ~v~i~~~~~~~~~~~~E~~~l~~----~v~kI~~~g~nVVl~~k~ 81 (159)
T 1ass_A 41 KVQISDPSKIQDFLNQETNTFKQ----MVEKIKKSGANVVLCQKG 81 (159)
T ss_dssp HHHTSCGGGHHHHHHHHHHHHHH----HHHHHHHTTCSEEEESSC
T ss_pred eEEECCHHHHHHHHHHHHHHHHH----HhhhhhhCCCeEEEECCc
Confidence 33456653334443433333332 233333346665544443
No 273
>3nek_A Nitrogen repressor-like protein MJ0159; structural genomics, unknown function, PSI-2, protein struct initiative; 2.50A {Methanocaldococcus jannaschii}
Probab=22.46 E-value=1.3e+02 Score=21.13 Aligned_cols=30 Identities=7% Similarity=0.145 Sum_probs=26.6
Q ss_pred CCceEEEEEecCChhHHHHHHHHHHHHHHH
Q 042816 129 EPGWFSFSFTLLTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 129 ~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~ 158 (163)
.++.+=++++.++.++++++++.++++.++
T Consensus 39 ~~G~VivN~s~i~k~~l~~al~i~~~v~~~ 68 (238)
T 3nek_A 39 ADGDVIVNTAFIDKKYLDEAFDILKEAYKK 68 (238)
T ss_dssp TBCEEEEEEEEEEGGGHHHHHHHHHHHHHT
T ss_pred CcccEEEEEEEecHHHHHHHHHHHHHHHHc
Confidence 378999999998999999999999998764
No 274
>2it9_A Hypothetical protein; structural genomics, PSI- protein structure initiative, joint center for structural G JCSG; HET: MSE PGE; 1.80A {Prochlorococcus marinus} SCOP: d.18.1.3
Probab=22.16 E-value=35 Score=21.43 Aligned_cols=7 Identities=57% Similarity=1.179 Sum_probs=4.8
Q ss_pred CceeEEE
Q 042816 5 PGFRISV 11 (163)
Q Consensus 5 ~G~RiG~ 11 (163)
+|+|+||
T Consensus 8 ~GWRLgw 14 (127)
T 2it9_A 8 PGWRIIF 14 (127)
T ss_dssp TTEEEEE
T ss_pred CCeEEEE
Confidence 5677776
No 275
>2ib0_A Conserved hypothetical alanine rich protein; 4-helix bundle, structural genomics, PSI-2, protein structur initiative; 2.00A {Mycobacterium tuberculosis} SCOP: a.25.1.9
Probab=21.79 E-value=1.8e+02 Score=19.18 Aligned_cols=56 Identities=11% Similarity=0.119 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCceeEEEeecCCcccCCChhhHHHHHHHHH
Q 042816 51 QKFININRERLRRLYVKFVAGLRQLGIECAKSNGGFYCWADMSGLISSYSEKGELELWDKLL 112 (163)
Q Consensus 51 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~ 112 (163)
...........+.+++.+...+.+.|.+...+..+| .+|... .+..+...|...|.
T Consensus 52 ~~~a~~~~~~HrarRD~L~~~l~~~G~~pp~a~aaY----~lP~~v--~d~asa~~lAa~lE 107 (170)
T 2ib0_A 52 NFLVADALKQHRHRRDDVIVMLSARGVTAPIAAAGY----QLPMQV--SSAADAARLAVRME 107 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSSC----CCSSCC--CSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCcC----CCCCCC--CCHHHHHHHHHHHH
Confidence 466677778899999999999999988887788887 344221 11125556666554
No 276
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=21.67 E-value=1.6e+02 Score=23.24 Aligned_cols=41 Identities=17% Similarity=0.347 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHH
Q 042816 103 GELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQ 157 (163)
Q Consensus 103 ~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~ 157 (163)
++.+..+.|++ .|+-| +|++|+.-+.|+-.+-++.++++.+
T Consensus 59 ~s~e~l~~Li~-aGmnv-------------~RlNfSHG~~e~h~~~i~~iR~~~~ 99 (520)
T 3khd_A 59 KSVETLVKLID-AGMDI-------------CRFNFSHGSHEDHKEMFNNVLKAQE 99 (520)
T ss_dssp CSHHHHHHHHH-HTEEE-------------EEEETTSSCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHH-cCCCE-------------EEEECCCCCHHHHHHHHHHHHHHHH
Confidence 44556666776 66654 7999998788888999999998776
No 277
>2qyx_A Uncharacterized protein MJ0159; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Methanocaldococcus jannaschii DSM2661} PDB: 3nek_A
Probab=21.62 E-value=1.3e+02 Score=21.00 Aligned_cols=29 Identities=7% Similarity=0.150 Sum_probs=25.9
Q ss_pred CceEEEEEecCChhHHHHHHHHHHHHHHH
Q 042816 130 PGWFSFSFTLLTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 130 ~~~iRi~~~~~~~~~l~~~~~~l~~~~~~ 158 (163)
++.+-++++.++.++++++++.++++.++
T Consensus 40 ~G~VivN~s~v~~~~~~~al~i~k~v~~~ 68 (238)
T 2qyx_A 40 DGDVIVNTAFIDKKYLDEAFDILKEAYKK 68 (238)
T ss_dssp BCEEEEEEEEEEGGGHHHHHHHHHHHHHT
T ss_pred CccEEEEEEEecHHHHHHHHHHHHHHHHc
Confidence 78999999988889999999999998764
No 278
>1pp9_B Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 2ybb_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* ...
Probab=21.02 E-value=83 Score=23.21 Aligned_cols=31 Identities=16% Similarity=0.141 Sum_probs=23.8
Q ss_pred CceEEEEEecCChhHHHHHHHHHHHHHHHhhh
Q 042816 130 PGWFSFSFTLLTEKDIHVVMERIRRISQTCKS 161 (163)
Q Consensus 130 ~~~iRi~~~~~~~~~l~~~~~~l~~~~~~~~~ 161 (163)
.+.+.+.+.. ++++++++++.+.+.++++..
T Consensus 319 ~g~~~i~~~~-~~~~~~~~~~~~~~~l~~l~~ 349 (439)
T 1pp9_B 319 SGLFGFYTIS-QAASAGDVIKAAYNQVKTIAQ 349 (439)
T ss_dssp EEEEEEEEEE-EGGGHHHHHHHHHHHHHHHHT
T ss_pred cceEEEEEEe-CHHHHHHHHHHHHHHHHHHhc
Confidence 5677777776 667889999998888877654
No 279
>3m0m_A L-rhamnose isomerase; beta/alpha barrel, HOMO-tetramer, metal-binding protein, TIM isomerase; HET: AOS; 1.45A {Pseudomonas stutzeri} PDB: 3m0l_A* 3m0h_A* 3m0v_A* 3m0x_A* 3m0y_A* 3itx_A 2hcv_A* 2i57_A* 2i56_A 3ity_A 3iud_A 3iuh_A 3iui_A 3itv_A* 3itt_A* 3itl_A* 3ito_A* 4gji_A* 4gjj_A*
Probab=21.01 E-value=2.5e+02 Score=21.51 Aligned_cols=27 Identities=22% Similarity=0.220 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 042816 50 VQKFININRERLRRLYVKFVAGLRQLG 76 (163)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~l~~~l~~~g 76 (163)
+.++-++....+.+.++.+.+.+.+.|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~g 37 (438)
T 3m0m_A 11 VARENDRRASALKEDYEALGANLARRG 37 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 344445555555555555555555443
No 280
>1ise_A Ribosome recycling factor; translation; 2.20A {Escherichia coli} SCOP: d.67.3.1 PDB: 1ek8_A* 1zn0_A 1zn1_A 2rdo_8
Probab=20.97 E-value=1.9e+02 Score=19.28 Aligned_cols=49 Identities=12% Similarity=0.175 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHHH
Q 042816 104 ELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 104 ~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~ 158 (163)
...+...+. .-++.+.|-. ....||+.+..++.|.=.+.++..+...++
T Consensus 75 i~~IekAI~-~SdLglnP~~-----dG~~Iri~iP~lTeErRkelvK~~k~~~E~ 123 (185)
T 1ise_A 75 SPAVEKAIM-ASDLGLNPNS-----AGSDIRVPLPPLTEERRKDLTKIVRGEAEQ 123 (185)
T ss_dssp HHHHHHHHH-TTCTTCCCEE-----SSSEEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HcCCCCCccc-----CCCEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 344444444 4677777741 256999999887887766666666555443
No 281
>1wqg_A Ribosome recycling factor; translation factor, triple-helix bundle, protein synthesis, translation; 2.15A {Mycobacterium tuberculosis} SCOP: d.67.3.1 PDB: 1wqf_A 1wqh_A
Probab=20.81 E-value=2e+02 Score=19.26 Aligned_cols=49 Identities=12% Similarity=0.205 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHHH
Q 042816 104 ELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 104 ~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~ 158 (163)
...+...+.. -++.+.|-. ....||+.+..++.|.=.+.++..+...++
T Consensus 75 i~~IekAI~~-SdLglnP~~-----dG~~Iri~iP~lTeErRkelvK~~k~~~E~ 123 (185)
T 1wqg_A 75 LRAIETAIRN-SDLGVNPTN-----DGALIRVAVPQLTEERRRELVKQAKHKGEE 123 (185)
T ss_dssp HHHHHHHHHH-STTCCCCEE-----CSSCEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCCCCccc-----CCCEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 3444544444 678777742 256899999887877766666666555443
No 282
>1eh1_A Ribosome recycling factor; translation, hinge variability; 2.60A {Thermus thermophilus} SCOP: d.67.3.1 PDB: 2qbe_6 2qbg_6 2qbi_6* 2qbk_6* 2v46_Y* 2v48_Y* 2z4l_6* 2z4n_6* 3j0d_J 3j0e_G
Probab=20.64 E-value=2e+02 Score=19.24 Aligned_cols=49 Identities=14% Similarity=0.247 Sum_probs=29.5
Q ss_pred HHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHHH
Q 042816 105 LELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 105 ~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~ 158 (163)
..-....+..-++.+.|- .....||+.+..++.|.=.+.++..+...++
T Consensus 76 i~~IekAI~~SdLglnP~-----~dG~~Iri~iP~lTeErRkelvK~~k~~~E~ 124 (185)
T 1eh1_A 76 LKAIEKAIRDSDLGLNPS-----NKGDALYINIPPLTEERRKDLVRAVRQYAEE 124 (185)
T ss_dssp HHHHHHHHSSSTTCCCEE-----EETTEEEEECCCCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCcc-----cCCCEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 333333444456666663 1256999999887777666666665554443
No 283
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=20.61 E-value=1.2e+02 Score=19.92 Aligned_cols=14 Identities=21% Similarity=0.287 Sum_probs=6.5
Q ss_pred hhhcCCccccCCce
Q 042816 72 LRQLGIECAKSNGG 85 (163)
Q Consensus 72 l~~~g~~~~~~~~g 85 (163)
+.+.|.++.-.+.|
T Consensus 74 I~~~g~nVVl~~k~ 87 (178)
T 1gml_A 74 IIQLKPDVVITEKG 87 (178)
T ss_dssp HHTTCCSEEEESSC
T ss_pred HhhcCCcEEEECCc
Confidence 33346665444443
No 284
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Probab=20.55 E-value=2e+02 Score=19.22 Aligned_cols=49 Identities=12% Similarity=0.164 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHHH
Q 042816 104 ELELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 104 ~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~ 158 (163)
...+...+.. -++.+.|-. ....||+.+..++.|.=.+.++..+...++
T Consensus 75 i~~IekAI~~-SdLglnP~~-----dG~~Iri~iP~lTeErRkelvK~~k~~~E~ 123 (185)
T 1is1_A 75 TQKVEKAIMM-SDLGLNPMS-----AGTIIRVPLPPLTEERRKDLVKIVRGEAEG 123 (185)
T ss_dssp HHHHHHHHHH-TTSSCCCEE-----ETTEEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCCCCccc-----CCCEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 3445554444 677777741 256999999887877766666666555443
No 285
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=20.54 E-value=2e+02 Score=19.23 Aligned_cols=48 Identities=8% Similarity=0.125 Sum_probs=31.3
Q ss_pred HHHHHHHHHhcCeEEcCCCCCCCCCCceEEEEEecCChhHHHHHHHHHHHHHHH
Q 042816 105 LELWDKLLNVAKVNVTPGSSCHCIEPGWFSFSFTLLTEKDIHVVMERIRRISQT 158 (163)
Q Consensus 105 ~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~ 158 (163)
..+...+. .-++.+.|-. ....||+.+..++.|.=.+.++..+...++
T Consensus 76 ~~IekAI~-~SdLglnP~~-----dG~~Iri~iP~lTeErRkelvK~~k~~~E~ 123 (185)
T 1dd5_A 76 SLIEKAIN-ASDLGLNPIN-----DGNVIRLVFPSPTTEQREKWVKKAKEIVEE 123 (185)
T ss_dssp HHHHHHHH-HSSSCCCCEE-----CSSCEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HcCCCCCccc-----CCCEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 44444444 4688887742 256899999887887766666666555443
No 286
>1kz1_A 6,7-dimethyl-8-ribityllumazine synthase; riboflavin biosynthesis, ligand binding, transferase; 2.00A {Schizosaccharomyces pombe} SCOP: c.16.1.1 PDB: 2a59_A* 2a58_A* 2a57_A* 1kyv_A* 1kyx_A* 1kyy_A* 1kz9_A 1kz4_A 1kz6_A
Probab=20.42 E-value=1.2e+02 Score=19.73 Aligned_cols=23 Identities=22% Similarity=0.287 Sum_probs=16.4
Q ss_pred CCCCceeEEEEEec-CHHHHHHHH
Q 042816 2 LSLPGFRISVIYSY-NNSVLAAAK 24 (163)
Q Consensus 2 ~~~~G~RiG~~i~~-~~~~~~~~~ 24 (163)
+..+|+|+|.+++. +.++.+.+.
T Consensus 13 ~~~~~~riaIV~arfn~~I~~~Ll 36 (159)
T 1kz1_A 13 LKGPELRILIVHARGNLQAIEPLV 36 (159)
T ss_dssp CCCTTCCEEEEECCTTHHHHHHHH
T ss_pred cCCCCCEEEEEEeeCcHHHHHHHH
Confidence 44578999999993 677655554
No 287
>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus}
Probab=20.42 E-value=98 Score=22.70 Aligned_cols=54 Identities=9% Similarity=-0.023 Sum_probs=33.3
Q ss_pred HHHHHHHHhcCeEEcCCCCCCC-CCCceEEEEEecCChhHHHHHHHHHHHHHHHhhh
Q 042816 106 ELWDKLLNVAKVNVTPGSSCHC-IEPGWFSFSFTLLTEKDIHVVMERIRRISQTCKS 161 (163)
Q Consensus 106 ~~~~~l~~~~gi~v~pg~~f~~-~~~~~iRi~~~~~~~~~l~~~~~~l~~~~~~~~~ 161 (163)
.+.+.|.+ .|..-..++.+.. ...+.+-+.... +.++.+++++.+.+.++++++
T Consensus 269 rL~~~lre-~gl~y~~~s~~~~~~~~g~~~i~~~~-~~~~~~~~~~~i~~~l~~l~~ 323 (406)
T 3eoq_A 269 RLHFALVD-KGLAEVASFGLEEADRAGTFHAYVQA-DPARKGEVLAVLQEELDRLGR 323 (406)
T ss_dssp HHHHHTTT-TTSEEEEEEEEEECSSCEEEEEEEEE-CGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-cCCeeEEEEEecccCCceEEEEEEEe-CcchHHHHHHHHHHHHHHHHh
Confidence 34444444 5544332222221 225778888776 778899999999888887654
Done!