Query 042820
Match_columns 120
No_of_seqs 116 out of 1132
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 17:12:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042820.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042820hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gla_A Low molecular weight he 99.9 1.5E-26 5.2E-31 150.4 10.7 84 1-89 16-99 (100)
2 4eld_A MJ16.5-P1, small heat s 99.9 2.8E-26 9.6E-31 160.9 10.2 93 1-101 68-161 (161)
3 1gme_A Heat shock protein 16.9 99.9 4.9E-26 1.7E-30 158.4 9.2 96 1-101 55-150 (151)
4 4fei_A Heat shock protein-rela 99.9 3.4E-25 1.2E-29 144.8 8.0 80 1-90 18-97 (102)
5 3l1e_A Alpha-crystallin A chai 99.9 2.4E-24 8.1E-29 141.9 10.5 89 1-101 14-105 (106)
6 2wj5_A Heat shock protein beta 99.9 8.3E-24 2.8E-28 138.1 9.9 85 1-100 13-98 (101)
7 3q9p_A Heat shock protein beta 99.9 2.6E-23 8.8E-28 132.0 9.9 75 1-87 9-84 (85)
8 3aab_A Putative uncharacterize 99.9 1.4E-23 4.6E-28 141.3 8.8 82 1-90 36-118 (123)
9 2y1y_A Alpha-crystallin B chai 99.9 5.5E-23 1.9E-27 131.6 10.5 78 1-90 8-86 (90)
10 2klr_A Alpha-crystallin B chai 99.9 2.5E-23 8.7E-28 147.9 9.8 92 1-106 75-167 (175)
11 2bol_A TSP36, small heat shock 99.9 7.4E-22 2.5E-26 151.3 8.5 78 1-87 235-313 (314)
12 2bol_A TSP36, small heat shock 99.8 2E-20 6.8E-25 143.4 10.0 87 1-104 114-201 (314)
13 1rl1_A Suppressor of G2 allele 98.6 5E-08 1.7E-12 63.8 5.9 68 2-89 22-89 (114)
14 2xcm_C SGT1-like protein, cyto 98.6 6.9E-08 2.4E-12 60.6 6.0 68 2-89 15-82 (92)
15 3igf_A ALL4481 protein; two-do 97.8 0.00013 4.6E-09 56.7 8.8 62 1-87 307-369 (374)
16 2k8q_A Protein SHQ1; beta-sand 97.7 4.7E-05 1.6E-09 51.5 4.5 64 2-90 16-84 (134)
17 3eud_A Protein SHQ1; CS domain 97.5 0.001 3.5E-08 43.7 9.4 64 2-90 30-98 (115)
18 1x5m_A Calcyclin-binding prote 97.1 0.0071 2.4E-07 39.9 9.5 68 2-89 33-104 (127)
19 1wh0_A Ubiquitin carboxyl-term 97.0 0.0047 1.6E-07 41.5 7.9 77 2-89 33-112 (134)
20 1wgv_A KIAA1068 protein; CS do 96.7 0.0091 3.1E-07 39.2 7.4 68 2-89 32-102 (124)
21 3qor_A Nuclear migration prote 96.6 0.0067 2.3E-07 39.8 6.5 65 2-89 29-97 (121)
22 1wfi_A Nuclear distribution ge 96.4 0.0044 1.5E-07 41.1 4.5 65 2-89 20-88 (131)
23 1ejf_A Progesterone receptor P 96.3 0.021 7.2E-07 37.5 7.3 67 2-89 16-82 (125)
24 2o30_A Nuclear movement protei 96.2 0.026 8.8E-07 37.4 7.7 63 2-88 17-80 (131)
25 2rh0_A NUDC domain-containing 96.2 0.024 8.1E-07 38.9 7.3 64 2-89 26-91 (157)
26 2cg9_X CO-chaperone protein SB 95.8 0.0061 2.1E-07 40.8 2.8 72 2-89 26-98 (134)
27 2kmw_A Uncharacterized protein 94.3 0.068 2.3E-06 36.3 4.8 65 2-89 17-82 (150)
28 3q9p_A Heat shock protein beta 88.9 1.1 3.6E-05 27.1 5.3 33 55-88 8-40 (85)
29 2y1y_A Alpha-crystallin B chai 86.5 1.5 5E-05 26.7 4.9 33 55-88 7-39 (90)
30 3l1e_A Alpha-crystallin A chai 85.8 1.7 6E-05 27.2 5.1 32 55-87 13-44 (106)
31 3gla_A Low molecular weight he 85.5 2.4 8.3E-05 25.9 5.6 35 55-90 15-49 (100)
32 2wj5_A Heat shock protein beta 84.9 1.9 6.4E-05 26.8 4.9 32 56-88 13-44 (101)
33 4fei_A Heat shock protein-rela 83.1 2.6 8.8E-05 26.1 5.0 32 55-87 17-48 (102)
34 4eld_A MJ16.5-P1, small heat s 80.4 9.1 0.00031 25.6 7.3 35 54-89 66-100 (161)
35 3aab_A Putative uncharacterize 80.3 4.9 0.00017 25.6 5.7 35 54-89 34-69 (123)
36 2klr_A Alpha-crystallin B chai 73.5 5.5 0.00019 27.4 4.7 34 54-88 73-106 (175)
37 2cql_A OK/SW-CL.103, 60S ribos 69.6 7.1 0.00024 24.4 4.2 21 12-33 20-40 (100)
38 1gme_A Heat shock protein 16.9 68.2 19 0.00066 23.7 6.4 35 54-89 53-88 (151)
39 2nwt_A UPF0165 protein AF_2212 65.3 4.8 0.00016 23.8 2.5 32 69-104 3-34 (69)
40 1nkw_E 50S ribosomal protein L 61.9 20 0.00068 25.6 5.7 21 12-33 39-59 (212)
41 1rl6_A Protein (ribosomal prot 61.3 15 0.00052 25.3 4.9 46 12-87 11-56 (177)
42 1vq8_E 50S ribosomal protein L 57.9 17 0.00059 25.1 4.7 47 12-87 9-55 (178)
43 3j21_F 50S ribosomal protein L 53.9 16 0.00056 25.3 4.1 21 12-33 14-34 (184)
44 3iz5_F 60S ribosomal protein L 50.3 30 0.001 24.1 5.0 21 12-33 13-33 (190)
45 2o30_A Nuclear movement protei 50.2 47 0.0016 21.2 5.7 30 56-85 16-45 (131)
46 3v2d_H 50S ribosomal protein L 47.8 29 0.001 23.9 4.6 21 12-33 12-32 (180)
47 2uwa_A Cellulase; glycoside hy 46.8 35 0.0012 24.9 5.1 43 11-65 31-74 (274)
48 3sd2_A Putative member of DUF3 43.9 25 0.00085 22.2 3.3 43 55-106 15-57 (101)
49 1ew4_A CYAY protein; friedreic 43.4 15 0.0005 23.2 2.2 16 70-85 29-44 (106)
50 3oeq_A Frataxin homolog, mitoc 42.4 19 0.00065 23.4 2.7 17 70-86 48-64 (123)
51 2kgs_A Uncharacterized protein 40.9 17 0.00059 23.5 2.4 26 7-33 2-27 (132)
52 3u5e_H L8, RP24, YL11, 60S rib 38.9 42 0.0014 23.3 4.3 21 12-33 13-33 (191)
53 2hyk_A Beta-1,3-glucanase; fam 37.6 32 0.0011 24.2 3.6 44 18-65 53-99 (245)
54 3bbo_I Ribosomal protein L6; l 35.7 13 0.00045 26.7 1.2 21 12-33 54-74 (223)
55 3qqz_A Putative uncharacterize 35.4 1.2E+02 0.0041 21.6 8.6 69 1-82 13-85 (255)
56 2rh0_A NUDC domain-containing 34.9 96 0.0033 20.5 5.5 31 55-85 24-54 (157)
57 1wgv_A KIAA1068 protein; CS do 34.8 85 0.0029 19.7 5.7 31 55-85 30-61 (124)
58 2gjh_A Designed protein; oblig 33.9 34 0.0012 18.8 2.5 22 11-33 31-52 (62)
59 2zkr_e 60S ribosomal protein L 33.4 51 0.0018 22.9 4.0 26 7-33 8-33 (192)
60 2ks0_A Uncharacterized protein 33.2 26 0.00089 20.6 2.1 23 10-33 18-40 (71)
61 3o5s_A Beta-glucanase; glycosy 30.6 89 0.0031 22.1 5.0 44 17-64 63-107 (238)
62 3t3l_A Frataxin, mitochondrial 30.4 33 0.0011 22.4 2.4 17 69-85 40-56 (129)
63 1wfi_A Nuclear distribution ge 30.1 75 0.0026 20.1 4.2 30 56-85 19-50 (131)
64 3d33_A Domain of unknown funct 29.4 1.1E+02 0.0037 19.2 5.2 38 57-104 22-59 (108)
65 3iln_A Laminarinase; jelly ROW 29.4 99 0.0034 21.8 5.1 46 17-65 49-97 (251)
66 4awd_A Beta-porphyranase; hydr 29.3 1.2E+02 0.0041 22.6 5.7 50 11-65 85-145 (324)
67 3qor_A Nuclear migration prote 29.1 1.1E+02 0.0037 19.2 5.5 31 55-85 27-59 (121)
68 4gzv_A Hypothetical protein; A 28.7 1.3E+02 0.0045 20.0 5.5 47 12-67 91-137 (142)
69 2ayh_A 1,3-1,4-beta-D-glucan 4 28.2 1E+02 0.0035 21.0 4.9 44 17-64 39-83 (214)
70 4atf_A Beta-agarase B; hydrola 26.1 1.5E+02 0.0052 22.0 5.7 48 11-64 72-121 (308)
71 1qys_A TOP7; alpha-beta, novel 25.2 69 0.0023 19.4 3.0 22 11-33 75-96 (106)
72 1nvp_C Transcription initiatio 24.6 33 0.0011 20.5 1.4 15 68-82 46-60 (76)
73 4a17_E RPL9, 60S ribosomal pro 24.1 63 0.0022 22.4 3.1 24 8-32 9-32 (188)
74 1q5l_A Chaperone protein DNAK; 23.8 1.5E+02 0.005 18.9 5.2 31 70-103 99-132 (135)
75 2jn4_A Hypothetical protein FI 21.1 69 0.0023 19.6 2.4 23 77-104 31-53 (87)
76 1o4z_A Beta-agarase B; glycosi 20.5 1.7E+02 0.0057 21.9 5.1 52 17-75 107-160 (346)
77 1nh2_C Transcription initiatio 20.3 45 0.0016 20.0 1.4 22 56-82 41-62 (79)
78 2c3v_A Alpha-amylase G-6; carb 20.2 1.1E+02 0.0037 19.0 3.3 24 53-79 48-71 (102)
79 2qzi_A Uncharacterized protein 20.2 1E+02 0.0036 19.3 3.2 23 64-86 79-101 (103)
80 1vd2_A Protein kinase C, IOTA 20.1 52 0.0018 20.0 1.8 17 70-86 8-24 (89)
No 1
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.94 E-value=1.5e-26 Score=150.35 Aligned_cols=84 Identities=31% Similarity=0.633 Sum_probs=77.8
Q ss_pred CEEEEEeCCCCCCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEECCCCccccceeEEEeCCEE
Q 042820 1 HVITLDSLGMKKDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFRMPMSANLEHVKAHLENGAL 80 (120)
Q Consensus 1 yii~~~lPG~~~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~vd~~~i~A~~~nGiL 80 (120)
|+|.++|||++++||+|++.+ +.|+|+|++.. +......+|+++||.+|.|.|+|.||.+||.+.|+|+|+||+|
T Consensus 16 ~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~~----~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~i~A~~~~GvL 90 (100)
T 3gla_A 16 FVLYADLPGIDPSQIEVQMDK-GILSIRGERKS----ESSTETERFSRIERRYGSFHRRFALPDSADADGITAAGRNGVL 90 (100)
T ss_dssp EEEEEECTTSCGGGCEEEEET-TEEEEEEEECC----GGGSSGGGEEEECCCCEEEEEEEECCTTBCTTSCEEEEETTEE
T ss_pred EEEEEECCCCCHHHEEEEEEC-CEEEEEEEEcC----cCccCCccEEEEeecceEEEEEEECCCCcChHHeEEEEeCCEE
Confidence 789999999999999999999 99999999997 5556678999999999999999999999999999999999999
Q ss_pred EEEEeCccc
Q 042820 81 RIKVPELAE 89 (120)
Q Consensus 81 ~I~lpK~~~ 89 (120)
+|++||.++
T Consensus 91 ~I~~pK~~~ 99 (100)
T 3gla_A 91 EIRIPKRPA 99 (100)
T ss_dssp EEEEEBC--
T ss_pred EEEEecCCC
Confidence 999999865
No 2
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.93 E-value=2.8e-26 Score=160.87 Aligned_cols=93 Identities=19% Similarity=0.301 Sum_probs=85.0
Q ss_pred CEEEEEeCCCCCCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEee-ecceEEEEEECCCCccccceeEEEeCCE
Q 042820 1 HVITLDSLGMKKDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAER-TFGKFWRQFRMPMSANLEHVKAHLENGA 79 (120)
Q Consensus 1 yii~~~lPG~~~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~-~~g~f~r~~~lP~~vd~~~i~A~~~nGi 79 (120)
|+|.++|||++++||+|++.+ +.|+|+|+++. ....++.+++++|| .+|.|.|+|.||.+||.+.|+|+|+||+
T Consensus 68 ~~v~~dlPG~~~edi~V~~~~-~~L~I~g~~~~----~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~A~~~nGv 142 (161)
T 4eld_A 68 IKVIAWLPGVNKEDIILNAVG-DTLEIRAKRSP----LMITESERIIYSEIPEEEEIYRTIKLPATVKEENASAKFENGV 142 (161)
T ss_dssp EEEEEECTTCCGGGEEEEEET-TEEEEEEECCC----CCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCEEEEETTE
T ss_pred EEEEEECCCCChHhEEEEEEC-CEEEEEEEEcc----cccCCCceEEEEEeeccccEEEEEECCCCcccccEEEEEECCE
Confidence 789999999999999999999 99999999987 44456678999999 9999999999999999999999999999
Q ss_pred EEEEEeCcccccCCCCeEEEee
Q 042820 80 LRIKVPELAEEKRRQPKVISIN 101 (120)
Q Consensus 80 L~I~lpK~~~~~~~~~~~I~I~ 101 (120)
|+|++||.... ++|+|+|+
T Consensus 143 L~I~lpK~~~~---~~r~I~Ie 161 (161)
T 4eld_A 143 LSVILPKAESS---IKKGINIE 161 (161)
T ss_dssp EEEEEEBCGGG---SCCCCCCC
T ss_pred EEEEEEcCCCC---CCcEeecC
Confidence 99999998776 57888874
No 3
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.93 E-value=4.9e-26 Score=158.41 Aligned_cols=96 Identities=47% Similarity=0.744 Sum_probs=84.8
Q ss_pred CEEEEEeCCCCCCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEECCCCccccceeEEEeCCEE
Q 042820 1 HVITLDSLGMKKDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFRMPMSANLEHVKAHLENGAL 80 (120)
Q Consensus 1 yii~~~lPG~~~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~vd~~~i~A~~~nGiL 80 (120)
|+|.++|||++++||+|++.+++.|+|+|+++. +...++.+|+++||.+|.|.|+|.||.+||.+.|+|.|+||+|
T Consensus 55 ~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~----~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~nGvL 130 (151)
T 1gme_A 55 HVFKADLPGVKKEEVKVEVEDGNVLVVSGERTK----EKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVL 130 (151)
T ss_dssp EEEEEECTTCCGGGEEEEEETTTEEEEEECCCC----CCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCEEEEETTEE
T ss_pred EEEEEECCCCChHHEEEEEecCCEEEEEEEEcc----ccccCCceEEEEeEeccEEEEEEECCCCccccceEEEEECCEE
Confidence 789999999999999999964389999999987 4445678999999999999999999999999999999999999
Q ss_pred EEEEeCcccccCCCCeEEEee
Q 042820 81 RIKVPELAEEKRRQPKVISIN 101 (120)
Q Consensus 81 ~I~lpK~~~~~~~~~~~I~I~ 101 (120)
+|++||..+. ....++|+|+
T Consensus 131 ~I~lPK~~~~-~~~~~~I~I~ 150 (151)
T 1gme_A 131 TVTVPKAEVK-KPEVKAIQIS 150 (151)
T ss_dssp EEEEECCCCC-TTCCCCCCCC
T ss_pred EEEEEccCcC-CCCCeEeeeC
Confidence 9999998865 2345777764
No 4
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.92 E-value=3.4e-25 Score=144.80 Aligned_cols=80 Identities=26% Similarity=0.395 Sum_probs=74.8
Q ss_pred CEEEEEeCCCCCCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEECCCCccccceeEEEeCCEE
Q 042820 1 HVITLDSLGMKKDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFRMPMSANLEHVKAHLENGAL 80 (120)
Q Consensus 1 yii~~~lPG~~~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~vd~~~i~A~~~nGiL 80 (120)
|+|.++|||++++||+|++.+ +.|+|+|+++. ..+|+++||.+|.|.|+|.||.+||.+.++|+|+||+|
T Consensus 18 ~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~~---------~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~~~GvL 87 (102)
T 4fei_A 18 LDLLLDVPGVDAGTLALAEDG-GQLTVSGERPG---------TEHLLRSERPSGRFVRELAFPEPVRPASGVASLAGGVL 87 (102)
T ss_dssp EEEEEECTTCCGGGCEEEEET-TEEEEEEEECC---------CSSCSSCCSEEEEEEEEEECSSCBCTTCCEEEEETTEE
T ss_pred EEEEEECCCCchHhEEEEEEC-CEEEEEEEEec---------CCCEEEEEEeccEEEEEEECCCCcchhHcEEEEECCEE
Confidence 789999999999999999999 99999999865 25778899999999999999999999999999999999
Q ss_pred EEEEeCcccc
Q 042820 81 RIKVPELAEE 90 (120)
Q Consensus 81 ~I~lpK~~~~ 90 (120)
+|++||..+.
T Consensus 88 ~I~lpK~~~~ 97 (102)
T 4fei_A 88 TVRFEKLRPT 97 (102)
T ss_dssp EEEEEBSSCC
T ss_pred EEEEEccCcc
Confidence 9999998765
No 5
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.91 E-value=2.4e-24 Score=141.92 Aligned_cols=89 Identities=19% Similarity=0.470 Sum_probs=76.2
Q ss_pred CEEEEEeCCCCCCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEECCCCccccceeEEE-eCCE
Q 042820 1 HVITLDSLGMKKDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFRMPMSANLEHVKAHL-ENGA 79 (120)
Q Consensus 1 yii~~~lPG~~~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~vd~~~i~A~~-~nGi 79 (120)
|+|.++||||+++||+|++.+ +.|+|+|++.. .. ....|++++ |.|+|.||.+||.+.|+|.| +||+
T Consensus 14 ~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~----~~--~~~~~~~~e-----F~R~~~LP~~vd~~~i~A~~s~~Gv 81 (106)
T 3l1e_A 14 FVIFLDVKHFSPEDLTVKVQE-DFVEIHGKHNE----RQ--DDHGYISRE-----FHRRYRLPSNVDQSALSCSLSADGM 81 (106)
T ss_dssp EEEEEECTTSCGGGEEEEEET-TEEEEEEEEEE----EE--TTTEEEEEE-----EEEEEECCTTBCTTSCEEEECTTSE
T ss_pred EEEEEECCCCChHHEEEEEEC-CEEEEEEEEcc----cc--CCCCEEEEE-----EEEEEECCCCcChhHcEEEECCCCE
Confidence 789999999999999999999 99999999875 22 234555443 99999999999999999999 8999
Q ss_pred EEEEEeCccccc--CCCCeEEEee
Q 042820 80 LRIKVPELAEEK--RRQPKVISIN 101 (120)
Q Consensus 80 L~I~lpK~~~~~--~~~~~~I~I~ 101 (120)
|+|++||..+.. ...+|+|+|+
T Consensus 82 L~I~~PK~~~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 82 LTFSGPKIPSGVDAGHSERAIPVS 105 (106)
T ss_dssp EEEEEEBCCCCTTTTSSSCCCCCC
T ss_pred EEEEEEccCcccccCCCCeEeeec
Confidence 999999998752 2478889885
No 6
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.90 E-value=8.3e-24 Score=138.15 Aligned_cols=85 Identities=18% Similarity=0.323 Sum_probs=72.0
Q ss_pred CEEEEEeCCCCCCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEECCCCccccceeEEE-eCCE
Q 042820 1 HVITLDSLGMKKDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFRMPMSANLEHVKAHL-ENGA 79 (120)
Q Consensus 1 yii~~~lPG~~~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~vd~~~i~A~~-~nGi 79 (120)
|+|.++||||+++||+|++.+ +.|+|+|++.. .. ++..|+++| |.|+|.||.+||.+.|+|.| +||+
T Consensus 13 ~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~~----~~--~~~~~~~~e-----F~R~~~LP~~vd~~~i~A~~s~nGv 80 (101)
T 2wj5_A 13 FSVLLDVKHFSPEEISVKVVG-DHVEVHARHEE----RP--DEHGFIARE-----FHRRYRLPPGVDPAAVTSALSPEGV 80 (101)
T ss_dssp EEEEEECTTSCGGGEEEEEET-TEEEEEEEEEE----CS--STTCCEEEE-----EEEEEECCTTBCTTCCEEEECTTSE
T ss_pred EEEEEECCCCcHHHeEEEEEC-CEEEEEEEEec----cc--CCCCEEEEE-----EEEEEECCCCcChhHCEEEECCCCE
Confidence 789999999999999999999 99999999986 22 344566555 99999999999999999999 7999
Q ss_pred EEEEEeCcccccCCCCeEEEe
Q 042820 80 LRIKVPELAEEKRRQPKVISI 100 (120)
Q Consensus 80 L~I~lpK~~~~~~~~~~~I~I 100 (120)
|+|++||..+. +++.+.|
T Consensus 81 L~I~lPK~~~~---~~~~~~i 98 (101)
T 2wj5_A 81 LSIQATPASAQ---ASLPSPP 98 (101)
T ss_dssp EEEEECBCCCC---CSSCC--
T ss_pred EEEEEECCCcC---CCCCCcc
Confidence 99999998876 3444444
No 7
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.90 E-value=2.6e-23 Score=131.95 Aligned_cols=75 Identities=20% Similarity=0.416 Sum_probs=64.1
Q ss_pred CEEEEEeCCCCCCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEECCCCccccceeEEEe-CCE
Q 042820 1 HVITLDSLGMKKDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFRMPMSANLEHVKAHLE-NGA 79 (120)
Q Consensus 1 yii~~~lPG~~~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~vd~~~i~A~~~-nGi 79 (120)
|+|.++||||+++||+|++.+ +.|+|+|++.. ... + . ++.+|.|.|+|.||.+||++.|+|.|. ||+
T Consensus 9 ~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~----~~~-~-~-----~~~~~~F~R~~~LP~~vd~~~i~A~~~~~Gv 76 (85)
T 3q9p_A 9 WRVSLDVNHFAPDELTVKTKD-GVVEITGKHAA----RQD-E-H-----GYISRCFTRKYTLPPGVDPTQVSSSLSPEGT 76 (85)
T ss_dssp EEEEEECTTTCCSEEEEEEET-TEEEEEEEEC------------------CCCEEEEEEEECCTTCCGGGCEEEECTTSE
T ss_pred EEEEEECCCCChHHEEEEEEC-CEEEEEEEEcc----ccC-C-C-----CEEEEEEEEEEECCCCcChHHcEEEECCCCE
Confidence 789999999999999999999 99999999886 221 1 1 224578999999999999999999998 999
Q ss_pred EEEEEeCc
Q 042820 80 LRIKVPEL 87 (120)
Q Consensus 80 L~I~lpK~ 87 (120)
|+|++||.
T Consensus 77 L~I~lPK~ 84 (85)
T 3q9p_A 77 LTVEAPMP 84 (85)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcC
Confidence 99999985
No 8
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.90 E-value=1.4e-23 Score=141.28 Aligned_cols=82 Identities=22% Similarity=0.331 Sum_probs=76.1
Q ss_pred CEEEEEeCCCCCCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEECCCCccccce-eEEEeCCE
Q 042820 1 HVITLDSLGMKKDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFRMPMSANLEHV-KAHLENGA 79 (120)
Q Consensus 1 yii~~~lPG~~~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~vd~~~i-~A~~~nGi 79 (120)
|+|.++|||++++||+|++.+++.|+|+|++.. +. +.+|+++||.+ .|.|+|.||.+||.+.| +|.|+||+
T Consensus 36 ~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~----~~---~~~~~~~Er~~-~f~R~~~LP~~vd~~~i~~A~~~~Gv 107 (123)
T 3aab_A 36 LVVVADLAGFNKEKIKARVSGQNELIIEAEREI----TE---PGVKYLTQRPK-YVRKVIRLPYNVAKDAEISGKYENGV 107 (123)
T ss_dssp EEEEEECCSCCGGGCEEEEETTTEEEEEEECCC----CC---CSCEEEECSCS-EEEEEEECSSEECTTCCCEEEEETTE
T ss_pred EEEEEECCCCCHHHEEEEEeCCCEEEEEEEEec----cC---CCeEEEEEEeE-EEEEEEECCCCcCcchhCeeEEcCCE
Confidence 789999999999999999988789999999887 22 67899999999 99999999999999999 99999999
Q ss_pred EEEEEeCcccc
Q 042820 80 LRIKVPELAEE 90 (120)
Q Consensus 80 L~I~lpK~~~~ 90 (120)
|+|++||....
T Consensus 108 L~I~lPK~~~~ 118 (123)
T 3aab_A 108 LTIRIPIAGTS 118 (123)
T ss_dssp EEEEEEGGGEE
T ss_pred EEEEEEcCCCC
Confidence 99999998765
No 9
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.89 E-value=5.5e-23 Score=131.58 Aligned_cols=78 Identities=21% Similarity=0.443 Sum_probs=67.6
Q ss_pred CEEEEEeCCCCCCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEECCCCccccceeEEE-eCCE
Q 042820 1 HVITLDSLGMKKDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFRMPMSANLEHVKAHL-ENGA 79 (120)
Q Consensus 1 yii~~~lPG~~~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~vd~~~i~A~~-~nGi 79 (120)
|+|.++||||+++||+|++.+ +.|+|+|++.. . .++..|+++| |.|+|.||.+||.+.|+|.| +||+
T Consensus 8 ~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~----~--~~~~~~~~~e-----f~R~~~LP~~vd~~~i~A~~~~~Gv 75 (90)
T 2y1y_A 8 FSVNLDVKHFSPEELKVKVLG-DVIEVHGKHEE----R--QDEHGFISRE-----FHRKYRIPADVDPLTITSSMSSDGV 75 (90)
T ss_dssp EEEEEECTTSCGGGEEEEEET-TEEEEEEEEEE----E--ECSSSEEEEE-----EEEEEECCTTBCGGGCEEEECTTSE
T ss_pred EEEEEECCCCcHHHeEEEEEC-CEEEEEEEEec----c--cCCCCEEEEE-----EEEEEECCCCcChhHcEEEECCCCE
Confidence 789999999999999999999 99999999886 2 2345666554 99999999999999999999 8999
Q ss_pred EEEEEeCcccc
Q 042820 80 LRIKVPELAEE 90 (120)
Q Consensus 80 L~I~lpK~~~~ 90 (120)
|+|++||....
T Consensus 76 L~I~~pK~~~~ 86 (90)
T 2y1y_A 76 LTVNGPRKQVS 86 (90)
T ss_dssp EEEEECBC---
T ss_pred EEEEEEcCCCC
Confidence 99999998766
No 10
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.89 E-value=2.5e-23 Score=147.92 Aligned_cols=92 Identities=22% Similarity=0.433 Sum_probs=67.2
Q ss_pred CEEEEEeCCCCCCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEECCCCccccceeEEE-eCCE
Q 042820 1 HVITLDSLGMKKDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFRMPMSANLEHVKAHL-ENGA 79 (120)
Q Consensus 1 yii~~~lPG~~~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~vd~~~i~A~~-~nGi 79 (120)
|+|.++||||+++||+|++.+ +.|+|+|++.. .. ++..|+++| |.|+|.||.+||.+.|+|+| +||+
T Consensus 75 ~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~~----~~--~~~~~~~re-----F~R~~~LP~~Vd~~~i~A~~s~dGv 142 (175)
T 2klr_A 75 FSVNLDVKHFSPEELKVKVLG-DVIEVHGKHEE----RQ--DEHGFISRE-----FHRKYRIPADVDPLTITSSLSSDGV 142 (175)
T ss_dssp EEEEECCSSCCGGGEEEEEET-TEEEEEEEEEE----EE--ETTEEEEEE-----EEEEEECTTTCCTTTCEEEECTTSC
T ss_pred EEEEEECCCCChHHEEEEEEC-CEEEEEEEEcc----cc--cCCceEEEE-----EEEEEECCCCcChhHeEEEEcCCCE
Confidence 789999999999999999999 99999999876 22 345566554 99999999999999999999 7999
Q ss_pred EEEEEeCcccccCCCCeEEEeeeCCCC
Q 042820 80 LRIKVPELAEEKRRQPKVISINEEPAG 106 (120)
Q Consensus 80 L~I~lpK~~~~~~~~~~~I~I~~~~~~ 106 (120)
|+|++||.... ...|+|+|+.++.+
T Consensus 143 L~I~lPK~~~~--~~~r~I~I~~~~~~ 167 (175)
T 2klr_A 143 LTVNGPRKQVS--GPERTIPITREEKP 167 (175)
T ss_dssp EEEEEECC-------------------
T ss_pred EEEEEECCCCC--CCCeEEEEecCCcc
Confidence 99999998764 24699999987633
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.86 E-value=7.4e-22 Score=151.34 Aligned_cols=78 Identities=15% Similarity=0.288 Sum_probs=63.9
Q ss_pred CEEEEEe-CCCCCCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEECCCCccccceeEEEeCCE
Q 042820 1 HVITLDS-LGMKKDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFRMPMSANLEHVKAHLENGA 79 (120)
Q Consensus 1 yii~~~l-PG~~~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~vd~~~i~A~~~nGi 79 (120)
|+|.++| ||++++||+|++.+ +.|+|+|+++. +. ..++++||.+|.|.|+|.||.+||++.|+|+|+|||
T Consensus 235 ~~v~~~ldPG~~~edi~V~v~~-~~LtI~ge~~~----~~----~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~dGv 305 (314)
T 2bol_A 235 IHLELKVDPHFAPKDVKVWAKG-NKVYVHGVTGK----EE----KTENASHSEHREFYKAFVTPEVVDASKTQAEIVDGL 305 (314)
T ss_dssp EEEEEECCTTCCGGGEEEEESS-SEEEEEEEEC--------------------CEEEEEEEECSSEECGGGCEEEEETTE
T ss_pred EEEEEEcCCCCChHHeEEEEEC-CEEEEEEEEec----cC----CceEEEEEeeeEEEEEEECCCCcChHHeEEEEeCCE
Confidence 6788999 99999999999999 99999999987 22 256889999999999999999999999999999999
Q ss_pred EEEEEeCc
Q 042820 80 LRIKVPEL 87 (120)
Q Consensus 80 L~I~lpK~ 87 (120)
|+|++||+
T Consensus 306 L~i~~Pk~ 313 (314)
T 2bol_A 306 MVVEAPLF 313 (314)
T ss_dssp EEEEEEEE
T ss_pred EEEEEecC
Confidence 99999996
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.83 E-value=2e-20 Score=143.42 Aligned_cols=87 Identities=21% Similarity=0.317 Sum_probs=74.4
Q ss_pred CEEEEEeCCCCCCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEECCCCccccceeEEEe-CCE
Q 042820 1 HVITLDSLGMKKDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFRMPMSANLEHVKAHLE-NGA 79 (120)
Q Consensus 1 yii~~~lPG~~~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~vd~~~i~A~~~-nGi 79 (120)
|+|.++||||+++||+|++.+ +.|+|+|++.. +.. . ++.+|.|.|+|.||.+||++.|+|+|+ ||+
T Consensus 114 ~~v~~dlPG~~~edI~V~v~~-~~L~I~ge~~~----~~e--~------~r~~g~F~R~~~LP~~Vd~e~i~A~~~~nGV 180 (314)
T 2bol_A 114 FKVYFNVKNFKAEEITIKADK-NKLVVRAQKSV----ACG--D------AAMSESVGRSIPLPPSVDRNHIQATITTDDV 180 (314)
T ss_dssp EEEEEECTTCCTTTEEEEEET-TEEEEEECCBS----STT--C------CCBCCCEEEEEECCTTBCGGGCEEEECSSSE
T ss_pred EEEEEECCCCchHHeEEEEEC-CEEEEEEEEec----cCC--C------CEEEEEEEEEEECCCCccccccEEEEeCCCE
Confidence 789999999999999999999 99999999886 221 1 277899999999999999999999999 999
Q ss_pred EEEEEeCcccccCCCCeEEEeeeCC
Q 042820 80 LRIKVPELAEEKRRQPKVISINEEP 104 (120)
Q Consensus 80 L~I~lpK~~~~~~~~~~~I~I~~~~ 104 (120)
|+|++||..++ .+.|.|..+.
T Consensus 181 L~I~lPK~~~~----~~~I~it~~~ 201 (314)
T 2bol_A 181 LVIEAPVNEPN----YKAIKLSPEK 201 (314)
T ss_dssp EEEEEEBSSCC----TTTEEEETTT
T ss_pred EEEEEeccCcc----cceeecccCC
Confidence 99999998765 2446655443
No 13
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.65 E-value=5e-08 Score=63.82 Aligned_cols=68 Identities=22% Similarity=0.238 Sum_probs=58.5
Q ss_pred EEEEEeCCCCCCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEECCCCccccceeEEEeCCEEE
Q 042820 2 VITLDSLGMKKDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFRMPMSANLEHVKAHLENGALR 81 (120)
Q Consensus 2 ii~~~lPG~~~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~vd~~~i~A~~~nGiL~ 81 (120)
.|.+.+||++++++.|.+.+ +.|.|++.... + ..|...+.|+..|+++..++.+.+|.|.
T Consensus 22 ~v~i~l~~v~~~~v~v~~~~-~~l~v~~~~~~---------~----------~~y~~~~~L~~~I~~e~s~~~~~~~~l~ 81 (114)
T 1rl1_A 22 VITLMIKNVQKNDVNVEFSE-KELSALVKLPS---------G----------EDYNLKLELLHPIIPEQSTFKVLSTKIE 81 (114)
T ss_dssp EEEECCCSCCGGGEEEECSS-SCEEEEEECTT---------S----------SEEEEEECBSSCCCGGGEEEEECSSSEE
T ss_pred EEEEEeCCCCHHHCEEEEEc-CEEEEEEEeCC---------C----------cEEEEEeeCCCcCCccccEEEEECCEEE
Confidence 57899999999999999999 99999875422 1 1277789999999999999999999999
Q ss_pred EEEeCccc
Q 042820 82 IKVPELAE 89 (120)
Q Consensus 82 I~lpK~~~ 89 (120)
|+|+|..+
T Consensus 82 i~L~K~~~ 89 (114)
T 1rl1_A 82 IKLKKPEA 89 (114)
T ss_dssp EEEECSSC
T ss_pred EEEEcCCC
Confidence 99999864
No 14
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=98.63 E-value=6.9e-08 Score=60.64 Aligned_cols=68 Identities=21% Similarity=0.229 Sum_probs=58.1
Q ss_pred EEEEEeCCCCCCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEECCCCccccceeEEEeCCEEE
Q 042820 2 VITLDSLGMKKDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFRMPMSANLEHVKAHLENGALR 81 (120)
Q Consensus 2 ii~~~lPG~~~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~vd~~~i~A~~~nGiL~ 81 (120)
.|.+.+||+.++++.|.+.+ +.|.|++.... + ..|...+.|+..|+++..++++.+|.|.
T Consensus 15 ~v~i~~~~v~~~~v~v~~~~-~~l~v~~~~~~---------~----------~~y~~~~~L~~~I~~~~s~~~~~~~~l~ 74 (92)
T 2xcm_C 15 VVTVFAKGIPKQNVNIDFGE-QILSVVIEVPG---------E----------DAYYLQPRLFGKIIPDKCKYEVLSTKIE 74 (92)
T ss_dssp EEEEECCSCCGGGEEEEECS-SBEEEEECCTT---------S----------CCEEECCBBSSCBCGGGCEEEECSSCEE
T ss_pred EEEEEECCCChHHeEEEEEC-CEEEEEEEcCC---------C----------cEEEEeeEcCCccCchhEEEEEECCEEE
Confidence 47889999999999999999 99999865322 1 1277788999999999999999999999
Q ss_pred EEEeCccc
Q 042820 82 IKVPELAE 89 (120)
Q Consensus 82 I~lpK~~~ 89 (120)
|+|+|..+
T Consensus 75 i~L~K~~~ 82 (92)
T 2xcm_C 75 ICLAKADI 82 (92)
T ss_dssp EEEEBSSS
T ss_pred EEEEcCCC
Confidence 99999754
No 15
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=97.75 E-value=0.00013 Score=56.69 Aligned_cols=62 Identities=23% Similarity=0.213 Sum_probs=52.6
Q ss_pred CEEEEEeCCCCCCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEECCCCccc-cceeEEEeCCE
Q 042820 1 HVITLDSLGMKKDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFRMPMSANL-EHVKAHLENGA 79 (120)
Q Consensus 1 yii~~~lPG~~~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~vd~-~~i~A~~~nGi 79 (120)
|.+.+.|||+++++|++.-.+ +.|+|+. |.|+|.+.||..... .-..|.|+||.
T Consensus 307 ~~~~l~lP~~~~~~~~l~~~g-deL~v~~------------------------g~~rR~i~LP~~L~~~~v~~A~~~~~~ 361 (374)
T 3igf_A 307 RQVRLFLPGFDKKQVKLTQYG-PEVTVEA------------------------GDQRRNIFLPPALSGRPITGAKFQNNY 361 (374)
T ss_dssp TEEEEECTTCCGGGCEEEEET-TEEEEEE------------------------TTEEEEEECCTTTTTCCEEEEEEETTE
T ss_pred EEEEEECCCCCHHHeEEEEEC-CeEEEEE------------------------CCEeecccCCHHHcCCCccccEEECCE
Confidence 789999999999999999998 8888872 339999999987643 46778999999
Q ss_pred EEEEEeCc
Q 042820 80 LRIKVPEL 87 (120)
Q Consensus 80 L~I~lpK~ 87 (120)
|+|++-..
T Consensus 362 L~i~~~~~ 369 (374)
T 3igf_A 362 LIISFLEH 369 (374)
T ss_dssp EEEEECCC
T ss_pred EEEEEehh
Confidence 99998643
No 16
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=97.67 E-value=4.7e-05 Score=51.47 Aligned_cols=64 Identities=14% Similarity=0.355 Sum_probs=49.8
Q ss_pred EEEEEeCCCC--CCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEECCCCc-cccceeEEEe--
Q 042820 2 VITLDSLGMK--KDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFRMPMSA-NLEHVKAHLE-- 76 (120)
Q Consensus 2 ii~~~lPG~~--~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~v-d~~~i~A~~~-- 76 (120)
+|.+.+|..+ .+++++.+.+ ..+.+. +..|..++.||..| |.+..+|+|.
T Consensus 16 iV~Ik~P~~~~~~sdiei~v~~-~~F~F~------------------------~~PYyLRL~LP~~V~e~~~~kA~YD~d 70 (134)
T 2k8q_A 16 FLKIFISNIRFSAVGLEIIIQE-NMIIFH------------------------LSPYYLRLRFPHELIDDERSTAQYDSK 70 (134)
T ss_dssp EEEEECCSSCCCSSSCCCEECS-SSEEEC------------------------SSSSCEEECCSSCEECCSSCEEEEETT
T ss_pred EEEEEcCccccCccccEEEEeC-CEEEEe------------------------cCCeEEEecCCCeeecCCCcceeEecc
Confidence 5677888887 7788888877 555554 11245569999998 9899999996
Q ss_pred CCEEEEEEeCcccc
Q 042820 77 NGALRIKVPELAEE 90 (120)
Q Consensus 77 nGiL~I~lpK~~~~ 90 (120)
.|.|+|+|||..+-
T Consensus 71 ~~~~~VtLpK~~~G 84 (134)
T 2k8q_A 71 DECINVKVAKLNKN 84 (134)
T ss_dssp TTEEEEEEEESSTT
T ss_pred CCEEEEEEeCCCCC
Confidence 89999999997765
No 17
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=97.55 E-value=0.001 Score=43.69 Aligned_cols=64 Identities=14% Similarity=0.355 Sum_probs=45.5
Q ss_pred EEEEEeCCCC--CCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEECCCCc-cccceeEEEe--
Q 042820 2 VITLDSLGMK--KDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFRMPMSA-NLEHVKAHLE-- 76 (120)
Q Consensus 2 ii~~~lPG~~--~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~v-d~~~i~A~~~-- 76 (120)
+|.+.+|-++ ..++++.+.+ +.+... +.+|..++.||..+ +.+.-+|+|.
T Consensus 30 ~I~I~~p~ir~~a~~~ei~vd~-~~F~F~------------------------~~PYyLRL~lP~~vved~~~~A~YD~d 84 (115)
T 3eud_A 30 FLKIFISNIRFSAVGLEIIIQE-NMIIFH------------------------LSPYYLRLRFPHELIDDERSTAQYDSK 84 (115)
T ss_dssp EEEEECCSCCCCSSSCEEEEET-TEEEEE------------------------ETTEEEEEECSSCEECSTTCEEEEETT
T ss_pred EEEEEcCceecccCccEEEEeC-CEEEEe------------------------cCCeEEEEecCcceecCCCcceEEeCC
Confidence 3556666654 5566666666 554444 12266679999887 7788899996
Q ss_pred CCEEEEEEeCcccc
Q 042820 77 NGALRIKVPELAEE 90 (120)
Q Consensus 77 nGiL~I~lpK~~~~ 90 (120)
+|.++|++||..+-
T Consensus 85 ~g~~~v~lpK~~~G 98 (115)
T 3eud_A 85 DECINVKVAKLNKN 98 (115)
T ss_dssp TTEEEEEEEESSTT
T ss_pred CcEEEEEEcCCcCC
Confidence 89999999998765
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.07 E-value=0.0071 Score=39.91 Aligned_cols=68 Identities=12% Similarity=0.201 Sum_probs=54.9
Q ss_pred EEEEEeCCC---CCCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEE-CCCCccccceeEEEeC
Q 042820 2 VITLDSLGM---KKDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFR-MPMSANLEHVKAHLEN 77 (120)
Q Consensus 2 ii~~~lPG~---~~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~-lP~~vd~~~i~A~~~n 77 (120)
.|.+.+||+ .++++.|.+.. +.|.|...... +. .|.-.+. |-..|+++.-+..+..
T Consensus 33 ~i~I~l~~~~~~~~~~v~V~~~~-~~l~v~~~~~~---------~~----------~y~~~~~~L~~~I~~e~S~~~v~~ 92 (127)
T 1x5m_A 33 KIYITLTGVHQVPTENVQVHFTE-RSFDLLVKNLN---------GK----------SYSMIVNNLLKPISVEGSSKKVKT 92 (127)
T ss_dssp EEEEECTTTTTSCTTSEEEEECS-SEEEEEECSCS---------SS----------CEEEEEECBSSCCCTTTCEEEEET
T ss_pred EEEEEeCCCCcCCccccEEEEEc-CEEEEEEEcCC---------CC----------cEEEEhHHhcCccCcccCEEEEeC
Confidence 478899999 89999999999 99999863221 11 1455674 9999999999999999
Q ss_pred CEEEEEEeCccc
Q 042820 78 GALRIKVPELAE 89 (120)
Q Consensus 78 GiL~I~lpK~~~ 89 (120)
+.+.|+|-|..+
T Consensus 93 ~kVei~L~K~~~ 104 (127)
T 1x5m_A 93 DTVLILCRKKVE 104 (127)
T ss_dssp TEEEEEEECSSS
T ss_pred CEEEEEEEECCC
Confidence 999999999764
No 19
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=96.96 E-value=0.0047 Score=41.49 Aligned_cols=77 Identities=12% Similarity=0.153 Sum_probs=57.0
Q ss_pred EEEEEeCCCCCCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEeeecc---eEEEEEECCCCccccceeEEEeCC
Q 042820 2 VITLDSLGMKKDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFG---KFWRQFRMPMSANLEHVKAHLENG 78 (120)
Q Consensus 2 ii~~~lPG~~~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g---~f~r~~~lP~~vd~~~i~A~~~nG 78 (120)
.|.+.++|+.++++.|.+.. +.|.|...... .. .++.....| .|.-.+.|-..|+++.-+..+..+
T Consensus 33 ~vtI~~k~v~~~~v~V~f~~-~~l~v~~~~~~----~~------~l~~~~a~g~~~~y~~~~~L~~~I~pe~S~~~v~~~ 101 (134)
T 1wh0_A 33 VVHVYVKEICRDTSRVLFRE-QDFTLIFQTRD----GN------FLRLHPGCGPHTTFRWQVKLRNLIEPEQCTFCFTAS 101 (134)
T ss_dssp EEEEECCSBCTTSCEEEECS-SEEEEEECBCC----HH------HHHHSTTCCTTSCEEEEEEBSSCEEEEEEEEEECSS
T ss_pred EEEEEeCCCCcccCEEEEEC-CEEEEEEEcCC----Cc------ccccccccCcceeEEEeccccccCCchhCEEEEeCC
Confidence 47889999999999999999 99999864332 00 000000011 266668899999999999999999
Q ss_pred EEEEEEeCccc
Q 042820 79 ALRIKVPELAE 89 (120)
Q Consensus 79 iL~I~lpK~~~ 89 (120)
-+.|+|.|...
T Consensus 102 kIeI~L~K~e~ 112 (134)
T 1wh0_A 102 RIDICLRKRQS 112 (134)
T ss_dssp EEEEEEEESSS
T ss_pred EEEEEEEECCC
Confidence 99999999864
No 20
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=96.65 E-value=0.0091 Score=39.21 Aligned_cols=68 Identities=18% Similarity=0.261 Sum_probs=52.7
Q ss_pred EEEEEeC-CC-CCCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEECCCCccccceeEEEeCCE
Q 042820 2 VITLDSL-GM-KKDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFRMPMSANLEHVKAHLENGA 79 (120)
Q Consensus 2 ii~~~lP-G~-~~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~vd~~~i~A~~~nGi 79 (120)
.|.+.|| |+ ++.|+.|.+.. +.|.|...... +..+ .-...|...|+++.-...+.+|-
T Consensus 32 ~i~I~lp~~~~~~kdv~V~i~~-~~l~v~~~~~~---------~~~~----------~~~~~L~~~I~~e~S~w~i~~~k 91 (124)
T 1wgv_A 32 EVRVPVPKHVVKGKQVSVALSS-SSIRVAMLEEN---------GERV----------LMEGKLTHKINTESSLWSLEPGK 91 (124)
T ss_dssp EEEEECCTTCCSGGGEEEEECS-SEEEEEEECSS---------SEEE----------EEEEEBSSCBCTTTCEEEECTTS
T ss_pred EEEEEcCCCCCchhheEEEEEc-CEEEEEEEccC---------CCce----------EEcccccCcCCCcCCEEEEeCCC
Confidence 4778888 87 89999999999 99999854311 1111 12467999999999999999885
Q ss_pred -EEEEEeCccc
Q 042820 80 -LRIKVPELAE 89 (120)
Q Consensus 80 -L~I~lpK~~~ 89 (120)
|.|+|-|...
T Consensus 92 ~v~i~L~K~~~ 102 (124)
T 1wgv_A 92 CVLVNLSKVGE 102 (124)
T ss_dssp EEEEEECBSSS
T ss_pred EEEEEEEECCC
Confidence 9999999853
No 21
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=96.62 E-value=0.0067 Score=39.79 Aligned_cols=65 Identities=9% Similarity=0.188 Sum_probs=50.6
Q ss_pred EEEEEeCC---CCCCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEECCCCccccceeEEEeCC
Q 042820 2 VITLDSLG---MKKDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFRMPMSANLEHVKAHLENG 78 (120)
Q Consensus 2 ii~~~lPG---~~~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~vd~~~i~A~~~nG 78 (120)
.|.+.||. ++..|+.|.+.. +.|.|...... ++ | ...|...|+++.....+++|
T Consensus 29 ~v~V~lp~~~~~~~kdv~V~i~~-~~l~v~~kg~~------------~~--------~--~g~L~~~I~~deS~w~i~~~ 85 (121)
T 3qor_A 29 DLAVPFCVNFRLKGKDMVVDIQR-RHLRVGLKGQP------------AI--------I--DGELYNEVKVEESSWLIADG 85 (121)
T ss_dssp EEEEECCCSSCCCGGGEEEEEET-TEEEEEETTSC------------CS--------E--EEEBSSCBCGGGCEEEEETT
T ss_pred EEEEECCCCCcccccceEEEEEc-CEEEEEEcCcc------------eE--------E--eccccccccccccEEEEcCC
Confidence 46788884 789999999999 99988532110 01 2 45788999999999999998
Q ss_pred -EEEEEEeCccc
Q 042820 79 -ALRIKVPELAE 89 (120)
Q Consensus 79 -iL~I~lpK~~~ 89 (120)
.|.|+|-|...
T Consensus 86 ~~i~i~L~K~~~ 97 (121)
T 3qor_A 86 AVVTVHLEKINK 97 (121)
T ss_dssp TEEEEEEEBSSS
T ss_pred CEEEEEEEECCC
Confidence 99999998754
No 22
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=96.38 E-value=0.0044 Score=41.09 Aligned_cols=65 Identities=12% Similarity=0.223 Sum_probs=51.1
Q ss_pred EEEEEeC-C--CCCCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEECCCCccccceeEEEeCC
Q 042820 2 VITLDSL-G--MKKDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFRMPMSANLEHVKAHLENG 78 (120)
Q Consensus 2 ii~~~lP-G--~~~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~vd~~~i~A~~~nG 78 (120)
.|.+.|| | +++.++.|.+.. +.|.|... . . . ++ | ...|...|+++.-...+.+|
T Consensus 20 ~i~I~lp~~~~~~~kdv~V~i~~-~~l~v~~k--g----~-----~-~~--------~--~~~L~~~I~~e~s~w~i~~~ 76 (131)
T 1wfi_A 20 DLAVPFRVSFRLKGKDVVVDIQR-RHLRVGLK--G----Q-----P-PV--------V--DGELYNEVKVEESSWLIEDG 76 (131)
T ss_dssp EEEECCCCSSCCCTTSEEEEEET-TEEEEEET--T----S-----C-CS--------B--CSCBSSCBCSTTCEEEEETT
T ss_pred EEEEECCCCCcccccceEEEEeC-CEEEEEEC--C----c-----e-EE--------E--ecccccccccccCEEEEcCC
Confidence 3677888 6 899999999999 99999842 2 0 0 00 1 34678899999999999998
Q ss_pred -EEEEEEeCccc
Q 042820 79 -ALRIKVPELAE 89 (120)
Q Consensus 79 -iL~I~lpK~~~ 89 (120)
.|.|+|-|..+
T Consensus 77 k~v~i~L~K~~~ 88 (131)
T 1wfi_A 77 KVVTVHLEKINK 88 (131)
T ss_dssp TEEEEEEEBSSS
T ss_pred CEEEEEEEECCC
Confidence 89999999864
No 23
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=96.26 E-value=0.021 Score=37.50 Aligned_cols=67 Identities=12% Similarity=0.066 Sum_probs=53.1
Q ss_pred EEEEEeCCCCCCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEECCCCccccceeEEEeCCEEE
Q 042820 2 VITLDSLGMKKDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFRMPMSANLEHVKAHLENGALR 81 (120)
Q Consensus 2 ii~~~lPG~~~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~vd~~~i~A~~~nGiL~ 81 (120)
.|.+.+|+. +++.|.+.. +.|.+++.... .+. .|.-.+.|-..|+++..+.++.++.+.
T Consensus 16 ~ltI~~~~~--~~~~V~~~~-~~l~~~~~~~~--------~~~----------~y~~~l~L~~~I~~e~S~~~v~~~kie 74 (125)
T 1ejf_A 16 FIEFCVEDS--KDVNVNFEK-SKLTFSCLGGS--------DNF----------KHLNEIDLFHCIDPNDSKHKRTDRSIL 74 (125)
T ss_dssp EEEECCTTE--EEEEEEEET-TEEEEEEEETT--------TTE----------EEEEEEEBSSCEEEEEEEEEECSSCEE
T ss_pred EEEEEecCC--CceEEEEEC-CEEEEEEEeCC--------CCc----------eEEEEEEccceeccccCEEEECCCEEE
Confidence 477888885 699999999 99999876522 111 155567899999999999999989999
Q ss_pred EEEeCccc
Q 042820 82 IKVPELAE 89 (120)
Q Consensus 82 I~lpK~~~ 89 (120)
|+|.|..+
T Consensus 75 i~L~K~~~ 82 (125)
T 1ejf_A 75 CCLRKGES 82 (125)
T ss_dssp EEEEESST
T ss_pred EEEEECCC
Confidence 99999864
No 24
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=96.25 E-value=0.026 Score=37.36 Aligned_cols=63 Identities=11% Similarity=0.123 Sum_probs=49.3
Q ss_pred EEEEEeC-CCCCCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEECCCCccccceeEEEeCCEE
Q 042820 2 VITLDSL-GMKKDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFRMPMSANLEHVKAHLENGAL 80 (120)
Q Consensus 2 ii~~~lP-G~~~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~vd~~~i~A~~~nGiL 80 (120)
.|.+.|| |+++.++.|.+.. +.|.|... . ..+ | ...|...|+++.-...+.+|-|
T Consensus 17 ~i~I~lp~~~~~kdv~V~i~~-~~l~v~~~--g----------~~~---------~--~~~L~~~I~~e~S~w~i~~~kv 72 (131)
T 2o30_A 17 NIQFPVTGDADSSAIKIRMVG-KKICVKNQ--G----------EIV---------I--DGELLHEVDVSSLWWVINGDVV 72 (131)
T ss_dssp EEEEECC---CCSCEEEEEET-TEEEEEET--T----------EEE---------E--EEEBSSCEEEEEEEEEEETTEE
T ss_pred EEEEECCCCCCccceEEEEEC-CEEEEEEC--C----------Eee---------E--ccccccccccccCEEEEeCCEE
Confidence 4778885 8999999999999 99999741 2 011 3 3578899999999999999999
Q ss_pred EEEEeCcc
Q 042820 81 RIKVPELA 88 (120)
Q Consensus 81 ~I~lpK~~ 88 (120)
.|+|-|..
T Consensus 73 ~i~L~K~~ 80 (131)
T 2o30_A 73 DVNVTKKR 80 (131)
T ss_dssp EEEEEESS
T ss_pred EEEEEECC
Confidence 99999983
No 25
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=96.15 E-value=0.024 Score=38.87 Aligned_cols=64 Identities=11% Similarity=0.176 Sum_probs=51.5
Q ss_pred EEEEEeC-CCCCCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEECCCCccccceeEEEeCCE-
Q 042820 2 VITLDSL-GMKKDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFRMPMSANLEHVKAHLENGA- 79 (120)
Q Consensus 2 ii~~~lP-G~~~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~vd~~~i~A~~~nGi- 79 (120)
.|.+.|| |++..+|.|.+.. +.|.|... . ..+ | ...|...|+++.-...+.+|-
T Consensus 26 ~v~I~lp~~~~~kdv~V~i~~-~~L~v~~k--g----------~~~---------l--~g~L~~~I~~eeS~w~i~~~k~ 81 (157)
T 2rh0_A 26 FIEVQVPPGTRAQDIQCGLQS-RHVALAVG--G----------REI---------L--KGKLFDSTIADEGTWTLEDRKM 81 (157)
T ss_dssp EEEEECCTTCCGGGEEEEECS-SEEEEEET--T----------EEE---------E--EEEBSSCBCGGGCEEEEECCCE
T ss_pred EEEEECCCCCcccceEEEEec-CEEEEEEC--C----------EEE---------E--eeccccccCccccEEEEcCCcE
Confidence 4788887 8999999999999 99998742 1 011 2 467899999999999999874
Q ss_pred EEEEEeCccc
Q 042820 80 LRIKVPELAE 89 (120)
Q Consensus 80 L~I~lpK~~~ 89 (120)
|.|+|-|...
T Consensus 82 v~I~L~K~~~ 91 (157)
T 2rh0_A 82 VRIVLTKTKR 91 (157)
T ss_dssp EEEEEEBSSC
T ss_pred EEEEEEEcCC
Confidence 9999999864
No 26
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=95.76 E-value=0.0061 Score=40.77 Aligned_cols=72 Identities=13% Similarity=0.167 Sum_probs=50.3
Q ss_pred EEEEEeCCCCCCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEECCCCccccceeEEEeCCE-E
Q 042820 2 VITLDSLGMKKDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFRMPMSANLEHVKAHLENGA-L 80 (120)
Q Consensus 2 ii~~~lPG~~~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~vd~~~i~A~~~nGi-L 80 (120)
.|.+.+|+++ ++.|.+.. +.|.+++.... ......+. .|...+.|...|+++..+..+.++. |
T Consensus 26 ~ltI~~~~~~--~~~V~~~~-~~l~~~~~~~~----~~g~~~~~---------~y~~~l~L~~~Idpe~S~~~v~~~~~v 89 (134)
T 2cg9_X 26 LITVSIADCD--APELTIKP-SYIELKAQSKP----HVGDENVH---------HYQLHIDLYKEIIPEKTMHKVANGQHY 89 (134)
T ss_dssp EEECCCSSEE--SCCCCBCS-SEEEECCEEC-----------CE---------EBCEEEECSSCCCSSSEEEEECCC--C
T ss_pred EEEEEecCCC--ceEEEEEC-CEEEEEEeccc----ccCCccCc---------eEEEEEEChhhccccccEEEECCCEEE
Confidence 3667778874 88888888 89998865432 00000001 1555688999999999999999888 9
Q ss_pred EEEEeCccc
Q 042820 81 RIKVPELAE 89 (120)
Q Consensus 81 ~I~lpK~~~ 89 (120)
.|+|.|..+
T Consensus 90 ei~L~K~~~ 98 (134)
T 2cg9_X 90 FLKLYKKDL 98 (134)
T ss_dssp EEEEEECSS
T ss_pred EEEEEECCC
Confidence 999999863
No 27
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=94.29 E-value=0.068 Score=36.33 Aligned_cols=65 Identities=11% Similarity=0.175 Sum_probs=49.8
Q ss_pred EEEEEeCCCCCCCeEEEEe-cCcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEECCCCccccceeEEEeCCEE
Q 042820 2 VITLDSLGMKKDEVKIEVE-ENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFRMPMSANLEHVKAHLENGAL 80 (120)
Q Consensus 2 ii~~~lPG~~~edi~I~~~-~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~vd~~~i~A~~~nGiL 80 (120)
+|++.++++ .++.|.+. . +.|.+++. .. .+. .|...+.|=..|+++ -+.++...-+
T Consensus 17 ~ltI~l~~~--~~v~V~~~~~-~~l~~~~~-~~--------~~~----------~y~~~l~L~~~Idpe-S~~~v~~~kI 73 (150)
T 2kmw_A 17 YLTVALPDA--KDISVKCEPQ-GLFSFSAL-GA--------QGE----------RFEFSLELYGKIMTE-YRKNVGLRNI 73 (150)
T ss_dssp EEEECCSSE--EEEEECCCTT-EEEEEEEE-TT--------TTE----------EEEEEEEBSSCEEEE-EEEEEESSSE
T ss_pred EEEEEeCCC--CceEEEEecC-CEEEEEEE-cC--------CCc----------eEEEEeEhhhccccc-ceEEecCCEE
Confidence 477888987 47888888 6 89999876 21 111 155567898999999 8888888889
Q ss_pred EEEEeCccc
Q 042820 81 RIKVPELAE 89 (120)
Q Consensus 81 ~I~lpK~~~ 89 (120)
.|+|.|..+
T Consensus 74 ei~L~K~e~ 82 (150)
T 2kmw_A 74 IFSIQKEER 82 (150)
T ss_dssp EEEEEECCS
T ss_pred EEEEEECCC
Confidence 999999764
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=88.93 E-value=1.1 Score=27.11 Aligned_cols=33 Identities=9% Similarity=0.191 Sum_probs=28.5
Q ss_pred eEEEEEECCCCccccceeEEEeCCEEEEEEeCcc
Q 042820 55 KFWRQFRMPMSANLEHVKAHLENGALRIKVPELA 88 (120)
Q Consensus 55 ~f~r~~~lP~~vd~~~i~A~~~nGiL~I~lpK~~ 88 (120)
.|.-.+.|| .++++.|+..+.+|.|+|.--+..
T Consensus 8 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 40 (85)
T 3q9p_A 8 RWRVSLDVN-HFAPDELTVKTKDGVVEITGKHAA 40 (85)
T ss_dssp EEEEEEECT-TTCCSEEEEEEETTEEEEEEEEC-
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 377789999 899999999999999999987654
No 29
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=86.52 E-value=1.5 Score=26.68 Aligned_cols=33 Identities=9% Similarity=0.141 Sum_probs=28.7
Q ss_pred eEEEEEECCCCccccceeEEEeCCEEEEEEeCcc
Q 042820 55 KFWRQFRMPMSANLEHVKAHLENGALRIKVPELA 88 (120)
Q Consensus 55 ~f~r~~~lP~~vd~~~i~A~~~nGiL~I~lpK~~ 88 (120)
.|.-.+.|| +++.+.|+..+.+|.|+|..-+..
T Consensus 7 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 39 (90)
T 2y1y_A 7 RFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 39 (90)
T ss_dssp CEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 377789999 899999999999999999987654
No 30
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=85.84 E-value=1.7 Score=27.25 Aligned_cols=32 Identities=13% Similarity=0.112 Sum_probs=28.2
Q ss_pred eEEEEEECCCCccccceeEEEeCCEEEEEEeCc
Q 042820 55 KFWRQFRMPMSANLEHVKAHLENGALRIKVPEL 87 (120)
Q Consensus 55 ~f~r~~~lP~~vd~~~i~A~~~nGiL~I~lpK~ 87 (120)
.|.-.+.|| +++.+.|+..+.+|.|+|.--+.
T Consensus 13 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~ 44 (106)
T 3l1e_A 13 KFVIFLDVK-HFSPEDLTVKVQEDFVEIHGKHN 44 (106)
T ss_dssp EEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEc
Confidence 377789999 89999999999999999998654
No 31
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=85.47 E-value=2.4 Score=25.93 Aligned_cols=35 Identities=17% Similarity=0.358 Sum_probs=29.8
Q ss_pred eEEEEEECCCCccccceeEEEeCCEEEEEEeCcccc
Q 042820 55 KFWRQFRMPMSANLEHVKAHLENGALRIKVPELAEE 90 (120)
Q Consensus 55 ~f~r~~~lP~~vd~~~i~A~~~nGiL~I~lpK~~~~ 90 (120)
.|.-.+.|| +++.+.|+..+.+|.|+|.--+....
T Consensus 15 ~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~~~~ 49 (100)
T 3gla_A 15 HFVLYADLP-GIDPSQIEVQMDKGILSIRGERKSES 49 (100)
T ss_dssp EEEEEEECT-TSCGGGCEEEEETTEEEEEEEECCGG
T ss_pred EEEEEEECC-CCCHHHEEEEEECCEEEEEEEEcCcC
Confidence 477789999 79999999999999999998776543
No 32
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=84.89 E-value=1.9 Score=26.84 Aligned_cols=32 Identities=6% Similarity=0.097 Sum_probs=28.3
Q ss_pred EEEEEECCCCccccceeEEEeCCEEEEEEeCcc
Q 042820 56 FWRQFRMPMSANLEHVKAHLENGALRIKVPELA 88 (120)
Q Consensus 56 f~r~~~lP~~vd~~~i~A~~~nGiL~I~lpK~~ 88 (120)
|.-.+.|| +++.+.|+..+.+|.|+|.--+..
T Consensus 13 ~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 44 (101)
T 2wj5_A 13 FSVLLDVK-HFSPEEISVKVVGDHVEVHARHEE 44 (101)
T ss_dssp EEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 66789999 899999999999999999987654
No 33
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=83.12 E-value=2.6 Score=26.11 Aligned_cols=32 Identities=9% Similarity=0.130 Sum_probs=28.1
Q ss_pred eEEEEEECCCCccccceeEEEeCCEEEEEEeCc
Q 042820 55 KFWRQFRMPMSANLEHVKAHLENGALRIKVPEL 87 (120)
Q Consensus 55 ~f~r~~~lP~~vd~~~i~A~~~nGiL~I~lpK~ 87 (120)
.|.-.+.|| .++.+.|+..+.++.|+|.--+.
T Consensus 17 ~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~ 48 (102)
T 4fei_A 17 HLDLLLDVP-GVDAGTLALAEDGGQLTVSGERP 48 (102)
T ss_dssp EEEEEEECT-TCCGGGCEEEEETTEEEEEEEEC
T ss_pred EEEEEEECC-CCchHhEEEEEECCEEEEEEEEe
Confidence 477889999 89999999999999999987653
No 34
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=80.44 E-value=9.1 Score=25.55 Aligned_cols=35 Identities=14% Similarity=0.110 Sum_probs=30.3
Q ss_pred ceEEEEEECCCCccccceeEEEeCCEEEEEEeCccc
Q 042820 54 GKFWRQFRMPMSANLEHVKAHLENGALRIKVPELAE 89 (120)
Q Consensus 54 g~f~r~~~lP~~vd~~~i~A~~~nGiL~I~lpK~~~ 89 (120)
..|.-.+.|| +++.+.|+..+.+|.|+|+.-+...
T Consensus 66 ~~~~v~~dlP-G~~~edi~V~~~~~~L~I~g~~~~~ 100 (161)
T 4eld_A 66 QHIKVIAWLP-GVNKEDIILNAVGDTLEIRAKRSPL 100 (161)
T ss_dssp SEEEEEEECT-TCCGGGEEEEEETTEEEEEEECCCC
T ss_pred CEEEEEEECC-CCChHhEEEEEECCEEEEEEEEccc
Confidence 3588889998 7899999999999999999887663
No 35
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=80.30 E-value=4.9 Score=25.60 Aligned_cols=35 Identities=20% Similarity=0.193 Sum_probs=30.4
Q ss_pred ceEEEEEECCCCccccceeEEEeC-CEEEEEEeCccc
Q 042820 54 GKFWRQFRMPMSANLEHVKAHLEN-GALRIKVPELAE 89 (120)
Q Consensus 54 g~f~r~~~lP~~vd~~~i~A~~~n-GiL~I~lpK~~~ 89 (120)
..|.-.+.|| +++.+.|+..+.+ |.|+|..-+...
T Consensus 34 ~~~~v~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 34 GYLVVVADLA-GFNKEKIKARVSGQNELIIEAEREIT 69 (123)
T ss_dssp TEEEEEEECC-SCCGGGCEEEEETTTEEEEEEECCCC
T ss_pred CEEEEEEECC-CCCHHHEEEEEeCCCEEEEEEEEecc
Confidence 4588889999 7999999999999 999999887653
No 36
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=73.54 E-value=5.5 Score=27.36 Aligned_cols=34 Identities=9% Similarity=0.138 Sum_probs=29.5
Q ss_pred ceEEEEEECCCCccccceeEEEeCCEEEEEEeCcc
Q 042820 54 GKFWRQFRMPMSANLEHVKAHLENGALRIKVPELA 88 (120)
Q Consensus 54 g~f~r~~~lP~~vd~~~i~A~~~nGiL~I~lpK~~ 88 (120)
..|.-.+.|| +++.+.|+..+.+|.|+|.--+..
T Consensus 73 d~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 106 (175)
T 2klr_A 73 DRFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 106 (175)
T ss_dssp SEEEEEECCS-SCCGGGEEEEEETTEEEEEEEEEE
T ss_pred CeEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 3588889999 899999999999999999987644
No 37
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=69.61 E-value=7.1 Score=24.44 Aligned_cols=21 Identities=19% Similarity=0.442 Sum_probs=17.2
Q ss_pred CCCeEEEEecCcEEEEEEEEEc
Q 042820 12 KDEVKIEVEENKVLRVSGEKKS 33 (120)
Q Consensus 12 ~edi~I~~~~~~~L~I~g~~~~ 33 (120)
|+.++|++.+ +.++|+|.+-.
T Consensus 20 P~gV~V~i~~-~~VtVKGPkG~ 40 (100)
T 2cql_A 20 PENVDITLKG-RTVIVKGPRGT 40 (100)
T ss_dssp CSSCEEEEET-TEEEEEETTEE
T ss_pred CCCCEEEEeC-CEEEEECCCce
Confidence 6788999988 99999886655
No 38
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=68.22 E-value=19 Score=23.75 Aligned_cols=35 Identities=20% Similarity=0.216 Sum_probs=29.3
Q ss_pred ceEEEEEECCCCccccceeEEEe-CCEEEEEEeCccc
Q 042820 54 GKFWRQFRMPMSANLEHVKAHLE-NGALRIKVPELAE 89 (120)
Q Consensus 54 g~f~r~~~lP~~vd~~~i~A~~~-nGiL~I~lpK~~~ 89 (120)
..|.-.+.|| +++.+.|+..+. ++.|+|..-+...
T Consensus 53 d~~~v~~dlP-Gv~kedI~V~v~~~~~L~I~g~~~~~ 88 (151)
T 1gme_A 53 EAHVFKADLP-GVKKEEVKVEVEDGNVLVVSGERTKE 88 (151)
T ss_dssp SEEEEEEECT-TCCGGGEEEEEETTTEEEEEECCCCC
T ss_pred CEEEEEEECC-CCChHHEEEEEecCCEEEEEEEEccc
Confidence 3588889999 889999999995 6799999877654
No 39
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=65.25 E-value=4.8 Score=23.76 Aligned_cols=32 Identities=19% Similarity=0.180 Sum_probs=19.7
Q ss_pred cceeEEEeCCEEEEEEeCcccccCCCCeEEEeeeCC
Q 042820 69 EHVKAHLENGALRIKVPELAEEKRRQPKVISINEEP 104 (120)
Q Consensus 69 ~~i~A~~~nGiL~I~lpK~~~~~~~~~~~I~I~~~~ 104 (120)
..|.|.|+||+|.--=|-.- +...++.|....
T Consensus 3 k~IeAiYEnGVfkPLe~l~L----~EG~kV~I~I~~ 34 (69)
T 2nwt_A 3 KIIEAVYENGVFKPLQKVDL----KEGERVKIKLEL 34 (69)
T ss_dssp CCEEEEEETTEEEESSCCCC----CTTEEEEEECCC
T ss_pred ceEEEEEECCEEeECCcCCC----CCCCEEEEEEEe
Confidence 46899999999985322222 234555555544
No 40
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=61.90 E-value=20 Score=25.57 Aligned_cols=21 Identities=24% Similarity=0.477 Sum_probs=17.0
Q ss_pred CCCeEEEEecCcEEEEEEEEEc
Q 042820 12 KDEVKIEVEENKVLRVSGEKKS 33 (120)
Q Consensus 12 ~edi~I~~~~~~~L~I~g~~~~ 33 (120)
|+.++|++.+ +.++|+|.+-.
T Consensus 39 P~gV~V~i~~-~~VtVKGPkG~ 59 (212)
T 1nkw_E 39 PSGVTVNAQD-GVFKVKGPKGE 59 (212)
T ss_pred CCCcEEEEeC-CEEEEECCCEE
Confidence 5788888888 89999887665
No 41
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=61.30 E-value=15 Score=25.31 Aligned_cols=46 Identities=17% Similarity=0.267 Sum_probs=32.6
Q ss_pred CCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEECCCCccccceeEEEeCCEEEEEEeCc
Q 042820 12 KDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFRMPMSANLEHVKAHLENGALRIKVPEL 87 (120)
Q Consensus 12 ~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~vd~~~i~A~~~nGiL~I~lpK~ 87 (120)
|+.++|++.+ +.++|+|.+-. ..+. |+..+ ....++|.|.+..+..
T Consensus 11 P~gV~V~i~~-~~VtVkGpkG~----------------------L~~~--~~~~v-----~i~~~~~~l~v~~~~~ 56 (177)
T 1rl6_A 11 PAGVTVTVNG-NTVTVKGPKGE----------------------LTRT--FHPDM-----TITVEGNVITVTRPSD 56 (177)
T ss_dssp CTTCEEEEET-TEEEEEETTEE----------------------EEEE--CCTTC-----EEEEETTEEEEECSCC
T ss_pred CCCCEEEEeC-CEEEEECCCeE----------------------EEEE--cCCCE-----EEEEeCCEEEEEcCCC
Confidence 5789999998 99999986665 4443 35443 4456889888875543
No 42
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=57.93 E-value=17 Score=25.12 Aligned_cols=47 Identities=17% Similarity=0.255 Sum_probs=32.1
Q ss_pred CCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEECCCCccccceeEEEeCCEEEEEEeCc
Q 042820 12 KDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFRMPMSANLEHVKAHLENGALRIKVPEL 87 (120)
Q Consensus 12 ~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~vd~~~i~A~~~nGiL~I~lpK~ 87 (120)
|+.++|++.+ +.++|+|.+-. ..|.|. +.. ++...++|.|.+..+..
T Consensus 9 P~gV~v~i~~-~~vtVkGpkG~----------------------L~~~~~-~~~-----v~i~~~~~~i~v~~~~~ 55 (178)
T 1vq8_E 9 PEDVDAEQDH-LDITVEGDNGS----------------------VTRRLW-YPD-----IDVSVDGDTVVIESDED 55 (178)
T ss_dssp CTTCEEEEET-TEEEEEETTEE----------------------EEEECC-CTT-----CEEEEETTEEEEECSCC
T ss_pred CCCCEEEEeC-CEEEEECCCeE----------------------EEEEEE-CCe-----EEEEEECCEEEEEcCCC
Confidence 5789999999 99999987665 444331 333 34556788888875543
No 43
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=53.86 E-value=16 Score=25.32 Aligned_cols=21 Identities=29% Similarity=0.441 Sum_probs=16.6
Q ss_pred CCCeEEEEecCcEEEEEEEEEc
Q 042820 12 KDEVKIEVEENKVLRVSGEKKS 33 (120)
Q Consensus 12 ~edi~I~~~~~~~L~I~g~~~~ 33 (120)
|++++|++.+ +.++|+|.+-.
T Consensus 14 P~gV~v~i~~-~~V~VkGpkG~ 34 (184)
T 3j21_F 14 PEGVEVTVEG-YKVKVKGPKGE 34 (184)
T ss_dssp CSSCEEEESS-SEEEEECSSCE
T ss_pred CCCcEEEEeC-CEEEEEcCCeE
Confidence 6788899988 88888876554
No 44
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=50.34 E-value=30 Score=24.07 Aligned_cols=21 Identities=29% Similarity=0.518 Sum_probs=17.8
Q ss_pred CCCeEEEEecCcEEEEEEEEEc
Q 042820 12 KDEVKIEVEENKVLRVSGEKKS 33 (120)
Q Consensus 12 ~edi~I~~~~~~~L~I~g~~~~ 33 (120)
|++++|++.+ +.++|+|.+-.
T Consensus 13 P~gV~v~i~~-~~V~VkGPkG~ 33 (190)
T 3iz5_F 13 PEGVTVQVAA-KVVTVEGPRGK 33 (190)
T ss_dssp CTTCEEEEET-TEEEEEETTEE
T ss_pred CCCCEEEEeC-CEEEEECCCce
Confidence 6889999998 99999987665
No 45
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=50.23 E-value=47 Score=21.21 Aligned_cols=30 Identities=17% Similarity=0.166 Sum_probs=23.5
Q ss_pred EEEEEECCCCccccceeEEEeCCEEEEEEe
Q 042820 56 FWRQFRMPMSANLEHVKAHLENGALRIKVP 85 (120)
Q Consensus 56 f~r~~~lP~~vd~~~i~A~~~nGiL~I~lp 85 (120)
..-+|.||.+++.+.+...|...-|.|.+.
T Consensus 16 V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~ 45 (131)
T 2o30_A 16 INIQFPVTGDADSSAIKIRMVGKKICVKNQ 45 (131)
T ss_dssp EEEEEECC---CCSCEEEEEETTEEEEEET
T ss_pred EEEEEECCCCCCccceEEEEECCEEEEEEC
Confidence 566899999999999999999999999873
No 46
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=47.84 E-value=29 Score=23.89 Aligned_cols=21 Identities=29% Similarity=0.406 Sum_probs=17.5
Q ss_pred CCCeEEEEecCcEEEEEEEEEc
Q 042820 12 KDEVKIEVEENKVLRVSGEKKS 33 (120)
Q Consensus 12 ~edi~I~~~~~~~L~I~g~~~~ 33 (120)
|++++|++.+ +.++|+|.+-.
T Consensus 12 P~gV~v~i~~-~~v~VkGpkG~ 32 (180)
T 3v2d_H 12 PKGVSVEVAP-GRVKVKGPKGE 32 (180)
T ss_dssp CTTCEEEEET-TEEEEECSSCE
T ss_pred CCCcEEEEeC-CEEEEEeCCcE
Confidence 6889999998 99999876654
No 47
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=46.78 E-value=35 Score=24.88 Aligned_cols=43 Identities=12% Similarity=0.205 Sum_probs=28.9
Q ss_pred CCCCeEEEEecCcEEEEEEEEEccCCccccccCceEE-EEeeecceEEEEEECCCC
Q 042820 11 KKDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWH-RAERTFGKFWRQFRMPMS 65 (120)
Q Consensus 11 ~~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~-~~e~~~g~f~r~~~lP~~ 65 (120)
.++++.| .+ +.|.|++.+.. +.++. +....+|.|+-+++||..
T Consensus 31 ~~~Nv~v--~~-G~L~L~~~k~t---------sa~i~Sk~~~~yG~~Ear~Klp~g 74 (274)
T 2uwa_A 31 GPQHQRV--DQ-GSLTIWLDSTS---------GSGFKSINRYRSGYFGANIKLQSG 74 (274)
T ss_dssp CGGGEEE--ET-TEEEEEECSSC---------CEEEEEEEEEEEEEEEEEEECCCS
T ss_pred CCCCEEE--EC-CEEEEEEecCC---------CCEEEECceEeeEEEEEEEEeCCC
Confidence 4555655 67 78999965432 22222 246678999999999975
No 48
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=43.90 E-value=25 Score=22.18 Aligned_cols=43 Identities=14% Similarity=0.139 Sum_probs=28.4
Q ss_pred eEEEEEECCCCccccceeEEEeCCEEEEEEeCcccccCCCCeEEEeeeCCCC
Q 042820 55 KFWRQFRMPMSANLEHVKAHLENGALRIKVPELAEEKRRQPKVISINEEPAG 106 (120)
Q Consensus 55 ~f~r~~~lP~~vd~~~i~A~~~nGiL~I~lpK~~~~~~~~~~~I~I~~~~~~ 106 (120)
.+.|++.+.+.. ...|.+.| +|.|.+...-+ .-+|.|.....+
T Consensus 15 ~~~rsI~i~P~~---~~~A~I~n-vlsV~F~~~~~-----~vTItItNe~TG 57 (101)
T 3sd2_A 15 SNPMGIPIQPTY---EKCAILSN-ILNVSFGRAKD-----YAIITVTNKATG 57 (101)
T ss_dssp -CCCCCCCCCSS---EEEEEETT-EEEEEESSCCS-----CEEEEEEETTTC
T ss_pred cccceeeecccc---cccEEEeC-EEEEEeccCCC-----cEEEEEEECCCC
Confidence 367777666443 24566777 99999987654 477888766433
No 49
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=43.37 E-value=15 Score=23.24 Aligned_cols=16 Identities=19% Similarity=0.484 Sum_probs=14.3
Q ss_pred ceeEEEeCCEEEEEEe
Q 042820 70 HVKAHLENGALRIKVP 85 (120)
Q Consensus 70 ~i~A~~~nGiL~I~lp 85 (120)
.+.+.+.+|||+|+++
T Consensus 29 d~D~e~~~gVLti~f~ 44 (106)
T 1ew4_A 29 DIDCEINGGVLTITFE 44 (106)
T ss_dssp CCEEEEETTEEEEECT
T ss_pred CEeeeccCCEEEEEEC
Confidence 4888999999999986
No 50
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=42.39 E-value=19 Score=23.45 Aligned_cols=17 Identities=18% Similarity=0.518 Sum_probs=14.5
Q ss_pred ceeEEEeCCEEEEEEeC
Q 042820 70 HVKAHLENGALRIKVPE 86 (120)
Q Consensus 70 ~i~A~~~nGiL~I~lpK 86 (120)
.+.+.+.+|||+|.++.
T Consensus 48 ~~Dve~~~gVLti~f~~ 64 (123)
T 3oeq_A 48 IPDVELSHGVMTLEIPA 64 (123)
T ss_dssp CCEEEECSSEEEEECTT
T ss_pred ceEEEccCCEEEEEECC
Confidence 37888999999999873
No 51
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=40.92 E-value=17 Score=23.52 Aligned_cols=26 Identities=8% Similarity=0.128 Sum_probs=23.4
Q ss_pred eCCCCCCCeEEEEecCcEEEEEEEEEc
Q 042820 7 SLGMKKDEVKIEVEENKVLRVSGEKKS 33 (120)
Q Consensus 7 lPG~~~edi~I~~~~~~~L~I~g~~~~ 33 (120)
.|.+++-.|.|.+++ +.++++|....
T Consensus 2 ~~~~~p~~i~V~v~~-G~VTLsG~Vp~ 27 (132)
T 2kgs_A 2 ASALSLSLLSISRSG-NTVTLIGDFPD 27 (132)
T ss_dssp CCCCCEEEEEEEECS-SEEEEEEEESC
T ss_pred CCcccceeEEEEEEC-CEEEEEEECCC
Confidence 477888899999999 99999999986
No 52
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=38.93 E-value=42 Score=23.33 Aligned_cols=21 Identities=14% Similarity=0.548 Sum_probs=18.0
Q ss_pred CCCeEEEEecCcEEEEEEEEEc
Q 042820 12 KDEVKIEVEENKVLRVSGEKKS 33 (120)
Q Consensus 12 ~edi~I~~~~~~~L~I~g~~~~ 33 (120)
|++++|++.+ +.++|+|.+-.
T Consensus 13 P~gV~v~i~~-~~V~VkGPkG~ 33 (191)
T 3u5e_H 13 PEGVTVSIKS-RIVKVVGPRGT 33 (191)
T ss_dssp CTTCEEEEET-TEEEEEETTEE
T ss_pred CCCcEEEEeC-CEEEEEcCCeE
Confidence 6899999998 99999987665
No 53
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A
Probab=37.64 E-value=32 Score=24.19 Aligned_cols=44 Identities=11% Similarity=0.336 Sum_probs=27.1
Q ss_pred EEecCcEEEEEEEEEccCCccccccCceEEEE---eeecceEEEEEECCCC
Q 042820 18 EVEENKVLRVSGEKKSDDYYKEGVEGEKWHRA---ERTFGKFWRQFRMPMS 65 (120)
Q Consensus 18 ~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~---e~~~g~f~r~~~lP~~ 65 (120)
.+.+++.|.|++.+.. ...-.+.++.-+ ...+|.|+-+++||..
T Consensus 53 ~v~~~G~L~I~~~~~~----~~~~~S~~i~S~~~f~~~yG~~E~r~klp~g 99 (245)
T 2hyk_A 53 ALDGNGNLVITARQEA----DGGYTSARLTTQNKVQPQYGRVEASIQIPRG 99 (245)
T ss_dssp EECSSSCEEEEEEECT----TSCEEECEEECTTTCCCCSEEEEEEEECCCS
T ss_pred EEecCCEEEEEEEecC----CCCEEEEEEEccCcccccCCeEEEEEEcCCC
Confidence 4554478999987765 111223333322 2457899999999963
No 54
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=35.69 E-value=13 Score=26.71 Aligned_cols=21 Identities=29% Similarity=0.395 Sum_probs=16.0
Q ss_pred CCCeEEEEecCcEEEEEEEEEc
Q 042820 12 KDEVKIEVEENKVLRVSGEKKS 33 (120)
Q Consensus 12 ~edi~I~~~~~~~L~I~g~~~~ 33 (120)
|+.|+|++.+ +.++|+|.+-.
T Consensus 54 P~gV~V~i~~-~~VtVKGPkG~ 74 (223)
T 3bbo_I 54 PSNVTIALEG-QDLKVKGPLGE 74 (223)
T ss_dssp STTSCEEESS-SEEEECCSSCC
T ss_pred CCCCEEEEeC-CEEEEECCCeE
Confidence 5778888888 88888876554
No 55
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=35.38 E-value=1.2e+02 Score=21.60 Aligned_cols=69 Identities=14% Similarity=0.181 Sum_probs=43.3
Q ss_pred CEEEEE---eCCCCCCCeEEEEec-CcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEECCCCccccceeEEEe
Q 042820 1 HVITLD---SLGMKKDEVKIEVEE-NKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFRMPMSANLEHVKAHLE 76 (120)
Q Consensus 1 yii~~~---lPG~~~edi~I~~~~-~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~vd~~~i~A~~~ 76 (120)
|.+.++ |||+..+==-+.+.. ++.|.+.... ...++.-... |.+.|+++|...-|++.|... .
T Consensus 13 y~~~~~~~~l~g~~~~lSGla~~~~~~~L~aV~d~-----------~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~-~ 79 (255)
T 3qqz_A 13 YHATIDGKEIAGITNNISSLTWSAQSNTLFSTINK-----------PAAIVEMTTN-GDLIRTIPLDFVKDLETIEYI-G 79 (255)
T ss_dssp CEEEEEEEECTTCCSCEEEEEEETTTTEEEEEEET-----------TEEEEEEETT-CCEEEEEECSSCSSEEEEEEC-S
T ss_pred eEEEEeceECCCcccCcceeEEeCCCCEEEEEECC-----------CCeEEEEeCC-CCEEEEEecCCCCChHHeEEe-C
Confidence 445555 899987533466663 3677765322 2334443443 789999999877788888664 5
Q ss_pred CCEEEE
Q 042820 77 NGALRI 82 (120)
Q Consensus 77 nGiL~I 82 (120)
+|.+.|
T Consensus 80 ~g~~~v 85 (255)
T 3qqz_A 80 DNQFVI 85 (255)
T ss_dssp TTEEEE
T ss_pred CCEEEE
Confidence 665555
No 56
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=34.94 E-value=96 Score=20.51 Aligned_cols=31 Identities=10% Similarity=0.310 Sum_probs=26.7
Q ss_pred eEEEEEECCCCccccceeEEEeCCEEEEEEe
Q 042820 55 KFWRQFRMPMSANLEHVKAHLENGALRIKVP 85 (120)
Q Consensus 55 ~f~r~~~lP~~vd~~~i~A~~~nGiL~I~lp 85 (120)
...-+|+||..++.+.+...+...-|.|.+.
T Consensus 24 eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k 54 (157)
T 2rh0_A 24 EVFIEVQVPPGTRAQDIQCGLQSRHVALAVG 54 (157)
T ss_dssp EEEEEEECCTTCCGGGEEEEECSSEEEEEET
T ss_pred EEEEEEECCCCCcccceEEEEecCEEEEEEC
Confidence 3667899999999999999999999999763
No 57
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=34.78 E-value=85 Score=19.68 Aligned_cols=31 Identities=13% Similarity=0.242 Sum_probs=26.8
Q ss_pred eEEEEEECCCCc-cccceeEEEeCCEEEEEEe
Q 042820 55 KFWRQFRMPMSA-NLEHVKAHLENGALRIKVP 85 (120)
Q Consensus 55 ~f~r~~~lP~~v-d~~~i~A~~~nGiL~I~lp 85 (120)
...-+|.||..+ +.+.+...+...-|.|.+.
T Consensus 30 ~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~ 61 (124)
T 1wgv_A 30 DLEVRVPVPKHVVKGKQVSVALSSSSIRVAML 61 (124)
T ss_dssp EEEEEEECCTTCCSGGGEEEEECSSEEEEEEE
T ss_pred EEEEEEEcCCCCCchhheEEEEEcCEEEEEEE
Confidence 366789999888 9999999999999999873
No 58
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=33.88 E-value=34 Score=18.84 Aligned_cols=22 Identities=9% Similarity=0.326 Sum_probs=18.7
Q ss_pred CCCCeEEEEecCcEEEEEEEEEc
Q 042820 11 KKDEVKIEVEENKVLRVSGEKKS 33 (120)
Q Consensus 11 ~~edi~I~~~~~~~L~I~g~~~~ 33 (120)
--+||+|...+ +.++|.|+...
T Consensus 31 gyndinvtwdg-dtvtvegqleg 52 (62)
T 2gjh_A 31 GYNDINVTWDG-DTVTVEGQLEG 52 (62)
T ss_dssp TCCSCEEEECS-SCEEEEEECCC
T ss_pred CcccceeEEcC-CEEEEEeEEcC
Confidence 35799999999 99999998765
No 59
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=33.37 E-value=51 Score=22.90 Aligned_cols=26 Identities=15% Similarity=0.236 Sum_probs=19.5
Q ss_pred eCCCCCCCeEEEEecCcEEEEEEEEEc
Q 042820 7 SLGMKKDEVKIEVEENKVLRVSGEKKS 33 (120)
Q Consensus 7 lPG~~~edi~I~~~~~~~L~I~g~~~~ 33 (120)
.|=-=|+.++|++.+ +.++|+|.+-.
T Consensus 8 ~pI~IP~gV~V~i~~-~~VtVkGpkG~ 33 (192)
T 2zkr_e 8 QTVDIPENVDITLKG-RTVIVKGPRGT 33 (192)
T ss_dssp --CCCCTTCEEEEET-TEEEEEETTEE
T ss_pred CcEEcCCCCEEEEeC-CEEEEECCCeE
Confidence 333447899999999 99999987665
No 60
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=33.23 E-value=26 Score=20.56 Aligned_cols=23 Identities=30% Similarity=0.479 Sum_probs=20.0
Q ss_pred CCCCCeEEEEecCcEEEEEEEEEc
Q 042820 10 MKKDEVKIEVEENKVLRVSGEKKS 33 (120)
Q Consensus 10 ~~~edi~I~~~~~~~L~I~g~~~~ 33 (120)
|+.+.|.+.... +.|.|+|+.=.
T Consensus 18 Fd~e~i~L~T~~-G~L~IkG~~L~ 40 (71)
T 2ks0_A 18 FDPKEILLETIQ-GVLSIKGEKLG 40 (71)
T ss_dssp ECSSEEEEEETT-EEEEEEEECCC
T ss_pred ECCCEEEEEeCc-eEEEEEcCCcE
Confidence 678899999999 99999998765
No 61
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A
Probab=30.62 E-value=89 Score=22.10 Aligned_cols=44 Identities=5% Similarity=0.071 Sum_probs=27.0
Q ss_pred EEEecCcEEEEEEEEEccCCccccccCceEEEE-eeecceEEEEEECCC
Q 042820 17 IEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRA-ERTFGKFWRQFRMPM 64 (120)
Q Consensus 17 I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~-e~~~g~f~r~~~lP~ 64 (120)
+.+.+++.|+|++.+.. ...-.+.++.-+ ...+|.|+-++++|.
T Consensus 63 v~v~~~G~L~l~~~~~~----~~~~ts~~i~S~~~~~yG~~e~r~K~p~ 107 (238)
T 3o5s_A 63 VSMTSLGEMRLALTSPA----YNKFDCGENRSVQTYGYGLYEVRMKPAK 107 (238)
T ss_dssp EEECTTSCEEEEEEEEE----TTEEEEEEEEESSCBCSEEEEEEEECCC
T ss_pred EEEeCCCEEEEEEEeCC----CCceeEEEEEEcCeEccEEEEEEEEeCC
Confidence 55666467999987765 111112222222 356899999999985
No 62
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=30.45 E-value=33 Score=22.44 Aligned_cols=17 Identities=24% Similarity=0.440 Sum_probs=14.7
Q ss_pred cceeEEEeCCEEEEEEe
Q 042820 69 EHVKAHLENGALRIKVP 85 (120)
Q Consensus 69 ~~i~A~~~nGiL~I~lp 85 (120)
..+.+.+.+|||+|+++
T Consensus 40 ~d~D~e~~~gVLti~f~ 56 (129)
T 3t3l_A 40 EDYDVSFGSGVLTVKLG 56 (129)
T ss_dssp TTCEEEEETTEEEEECC
T ss_pred cceeeecCCCEEEEEEc
Confidence 46788899999999985
No 63
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=30.13 E-value=75 Score=20.12 Aligned_cols=30 Identities=13% Similarity=0.136 Sum_probs=26.0
Q ss_pred EEEEEECCCC--ccccceeEEEeCCEEEEEEe
Q 042820 56 FWRQFRMPMS--ANLEHVKAHLENGALRIKVP 85 (120)
Q Consensus 56 f~r~~~lP~~--vd~~~i~A~~~nGiL~I~lp 85 (120)
..-+|+||.+ +..+.+...+...-|.|.+.
T Consensus 19 V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~k 50 (131)
T 1wfi_A 19 LDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLK 50 (131)
T ss_dssp EEEEECCCCSSCCCTTSEEEEEETTEEEEEET
T ss_pred EEEEEECCCCCcccccceEEEEeCCEEEEEEC
Confidence 5567889987 89999999999999999883
No 64
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=29.42 E-value=1.1e+02 Score=19.22 Aligned_cols=38 Identities=13% Similarity=0.068 Sum_probs=21.1
Q ss_pred EEEEECCCCccccceeEEEeCCEEEEEEeCcccccCCCCeEEEeeeCC
Q 042820 57 WRQFRMPMSANLEHVKAHLENGALRIKVPELAEEKRRQPKVISINEEP 104 (120)
Q Consensus 57 ~r~~~lP~~vd~~~i~A~~~nGiL~I~lpK~~~~~~~~~~~I~I~~~~ 104 (120)
.|++..| -=++|.++|.+|.|.+.+.-. .-+|.|....
T Consensus 22 ~RSI~~~-----iPi~A~id~~~L~I~F~~~~~-----~vtItI~~~~ 59 (108)
T 3d33_A 22 IRSAATN-----CPITVFTDGYLLTLKNASPDR-----DMTIRITDMA 59 (108)
T ss_dssp ------C-----CSEEEEEETTEEEEEESSCCS-----EEEEEEEETT
T ss_pred ccccCCC-----CCcEEEEECCEEEEEECCcCC-----CEEEEEEECC
Confidence 5677533 135788889999999955433 3667776433
No 65
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus}
Probab=29.41 E-value=99 Score=21.85 Aligned_cols=46 Identities=22% Similarity=0.324 Sum_probs=27.6
Q ss_pred EEEecCcEEEEEEEEEccCCccccccCceEEE---EeeecceEEEEEECCCC
Q 042820 17 IEVEENKVLRVSGEKKSDDYYKEGVEGEKWHR---AERTFGKFWRQFRMPMS 65 (120)
Q Consensus 17 I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~---~e~~~g~f~r~~~lP~~ 65 (120)
+.+.+ +.|+|++.+.... ...-.+.++.- ....+|.|+-+++||..
T Consensus 49 v~v~~-G~L~i~~~~~~~~--~~~~tS~~i~t~~~~~~~yG~~e~r~k~p~g 97 (251)
T 3iln_A 49 ARVGG-GVLIIEARRESYE--GREYTSARLVTRGKASWTYGRFEIRARLPSG 97 (251)
T ss_dssp EEEET-TEEEEEEEEEEET--TEEEEECEEECTTTCCBSSEEEEEEEECCCS
T ss_pred EEEEC-CEEEEEEEeccCC--CCCEEEEEEEECCcccccceEEEEEEEccCC
Confidence 45568 9999999776410 01112222222 13467899999999964
No 66
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius}
Probab=29.25 E-value=1.2e+02 Score=22.62 Aligned_cols=50 Identities=12% Similarity=0.199 Sum_probs=29.9
Q ss_pred CCCCeEEEEecCcEEEEEEEEEccCCcccccc----C-----ceEEEE--eeecceEEEEEECCCC
Q 042820 11 KKDEVKIEVEENKVLRVSGEKKSDDYYKEGVE----G-----EKWHRA--ERTFGKFWRQFRMPMS 65 (120)
Q Consensus 11 ~~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~----~-----~~~~~~--e~~~g~f~r~~~lP~~ 65 (120)
+++++.| .+ +.|+|++.+.... ..... . +++.-+ ...+|.|+-+++||..
T Consensus 85 ~~~Nv~v--~d-G~L~I~a~~~~~~--~~~~G~~~~~ytsasg~i~Sk~~~~~yG~~E~r~Klp~~ 145 (324)
T 4awd_A 85 KAENVSV--KK-GCLRIINTVLSPT--EGLDGKPGDKYRLAGGAVASVKNQAHYGYYETRMKASLT 145 (324)
T ss_dssp CGGGEEE--ET-TEEEEECEEEEEE--ECGGGCBSSSEEEEECEEEESCCCBCSEEEEEEEECCSS
T ss_pred cchhEEE--EC-CEEEEEEEeCCCC--cccCCcccccEEEEEEEEEECCccccCcEEEEEEECCCC
Confidence 4455544 57 9999999887510 00001 1 122222 2568999999999975
No 67
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=29.07 E-value=1.1e+02 Score=19.16 Aligned_cols=31 Identities=6% Similarity=0.087 Sum_probs=26.9
Q ss_pred eEEEEEECCCC--ccccceeEEEeCCEEEEEEe
Q 042820 55 KFWRQFRMPMS--ANLEHVKAHLENGALRIKVP 85 (120)
Q Consensus 55 ~f~r~~~lP~~--vd~~~i~A~~~nGiL~I~lp 85 (120)
...-+|+||.. ++.+.+...+...-|.|.+.
T Consensus 27 eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~k 59 (121)
T 3qor_A 27 ELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLK 59 (121)
T ss_dssp EEEEEEECCCSSCCCGGGEEEEEETTEEEEEET
T ss_pred eEEEEEECCCCCcccccceEEEEEcCEEEEEEc
Confidence 46678999988 89999999999989999876
No 68
>4gzv_A Hypothetical protein; AN eight-stranded beta barrel, lipocalin family, structural joint center for structural genomics, JCSG; 1.95A {Bacteroides ovatus}
Probab=28.74 E-value=1.3e+02 Score=19.99 Aligned_cols=47 Identities=28% Similarity=0.472 Sum_probs=30.1
Q ss_pred CCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEEeeecceEEEEEECCCCcc
Q 042820 12 KDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFRMPMSAN 67 (120)
Q Consensus 12 ~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~vd 67 (120)
.+.|+++..++|.|.++-..+.+ ....+-++|.. | +++++..|..+-
T Consensus 91 ~n~L~fe~~~dn~l~lsy~~~~~---~~G~e~~~w~~-E-----~W~RV~~P~~fp 137 (142)
T 4gzv_A 91 DNILEFEIKDNDYLHLKYFIKSD---LNGNELNTWYY-E-----TWKRVEMPAKFP 137 (142)
T ss_dssp EEEEEEEEETTTEEEEEEEEEEC---TTCCEEEEEEE-E-----EEEECBCCSSCC
T ss_pred ccEEEEEEccCCEEEEEEEccCC---CCCcccCCceE-E-----EEEecCCCccCc
Confidence 45788888888999999877762 12222234432 2 667788887653
No 69
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A
Probab=28.24 E-value=1e+02 Score=21.02 Aligned_cols=44 Identities=5% Similarity=0.143 Sum_probs=26.3
Q ss_pred EEEecCcEEEEEEEEEccCCccccccCceEEEE-eeecceEEEEEECCC
Q 042820 17 IEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRA-ERTFGKFWRQFRMPM 64 (120)
Q Consensus 17 I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~-e~~~g~f~r~~~lP~ 64 (120)
+.+.+++.|.|++.+.. ...-.+.++..+ ...+|.|+-+++||.
T Consensus 39 v~v~~~G~L~i~~~~~~----~~~~~s~~i~S~~~f~yG~~E~r~k~p~ 83 (214)
T 2ayh_A 39 VNFTNDGKLKLGLTSSA----YNKFDCAEYRSTNIYGYGLYEVSMKPAK 83 (214)
T ss_dssp EEECTTSCEEEEEEEEE----TTEEEEEEEEESSCBCSEEEEEEEECCC
T ss_pred EEEcCCCEEEEEEecCC----CCceeeEEEEECCeEeeEEEEEEEEcCC
Confidence 34455478999987765 111112222221 246899999999995
No 70
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans}
Probab=26.06 E-value=1.5e+02 Score=22.00 Aligned_cols=48 Identities=8% Similarity=0.094 Sum_probs=28.2
Q ss_pred CCCCeEEEEecCcEEEEEEEEEccCCccccccCceEEEE-eeecc-eEEEEEECCC
Q 042820 11 KKDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRA-ERTFG-KFWRQFRMPM 64 (120)
Q Consensus 11 ~~edi~I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~-e~~~g-~f~r~~~lP~ 64 (120)
+++++.| .+ +.|+|++.+... .....++++..+ ...+| .|+-+++||.
T Consensus 72 ~~~Nv~v--~d-G~L~I~a~~~~~---~~~~tSg~i~Sk~~~~ygg~~EaR~Kl~~ 121 (308)
T 4atf_A 72 KRDRSYV--AD-GELKMWATRKPG---SDKINMGCITSKTRVVYPVYIEARAKVMN 121 (308)
T ss_dssp CGGGEEE--ET-TEEEEECEECTT---SSCEEECEEEESSCBCSSEEEEEEEECCS
T ss_pred cccceEE--EC-CEEEEEEEecCC---CCCEEEEEEEECceeecCeEEEEEEECCC
Confidence 4555544 57 999999987641 111122222222 23466 8999999984
No 71
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=25.16 E-value=69 Score=19.36 Aligned_cols=22 Identities=9% Similarity=0.367 Sum_probs=17.5
Q ss_pred CCCCeEEEEecCcEEEEEEEEEc
Q 042820 11 KKDEVKIEVEENKVLRVSGEKKS 33 (120)
Q Consensus 11 ~~edi~I~~~~~~~L~I~g~~~~ 33 (120)
--+||.|.+.+ +.++|.|+...
T Consensus 75 gyndinvtfdg-dtvtvegqleg 96 (106)
T 1qys_A 75 GYNDINVTFDG-DTVTVEGQLEG 96 (106)
T ss_dssp TCCEEEEEEET-TEEEEEEEC--
T ss_pred CCcceeEEEcC-CeEEEEeEEcC
Confidence 34789999999 99999998765
No 72
>1nvp_C Transcription initiation factor IIA beta chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: b.56.1.1
Probab=24.58 E-value=33 Score=20.47 Aligned_cols=15 Identities=27% Similarity=0.508 Sum_probs=12.6
Q ss_pred ccceeEEEeCCEEEE
Q 042820 68 LEHVKAHLENGALRI 82 (120)
Q Consensus 68 ~~~i~A~~~nGiL~I 82 (120)
-.+-++.|++||++|
T Consensus 46 KnkWKc~LKdGim~i 60 (76)
T 1nvp_C 46 KNKWKFHLKDGIMNL 60 (76)
T ss_dssp TTEEEEEEEEEEEEE
T ss_pred CceEEEEEeccEEEE
Confidence 346789999999998
No 73
>4a17_E RPL9, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_E 4a1c_E 4a1e_E
Probab=24.08 E-value=63 Score=22.38 Aligned_cols=24 Identities=25% Similarity=0.274 Sum_probs=19.2
Q ss_pred CCCCCCCeEEEEecCcEEEEEEEEE
Q 042820 8 LGMKKDEVKIEVEENKVLRVSGEKK 32 (120)
Q Consensus 8 PG~~~edi~I~~~~~~~L~I~g~~~ 32 (120)
|=-=|++++|++.+ +.++|+|.+-
T Consensus 9 ~I~IP~gV~v~i~~-~~V~VkGPkG 32 (188)
T 4a17_E 9 NVPIPDKVTITAKQ-RVVEVKGPLG 32 (188)
T ss_dssp ECCCCTTCEEEEET-TEEEEEETTE
T ss_pred cEECCCCcEEEEeC-CEEEEEcCCe
Confidence 33347899999999 9999998654
No 74
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=23.84 E-value=1.5e+02 Score=18.93 Aligned_cols=31 Identities=13% Similarity=0.389 Sum_probs=20.3
Q ss_pred ceeEEEe---CCEEEEEEeCcccccCCCCeEEEeeeC
Q 042820 70 HVKAHLE---NGALRIKVPELAEEKRRQPKVISINEE 103 (120)
Q Consensus 70 ~i~A~~~---nGiL~I~lpK~~~~~~~~~~~I~I~~~ 103 (120)
.|+..|+ ||+|.|+.--... .....|.|...
T Consensus 99 ~IeVtf~iD~nGiL~V~a~d~~t---g~~~~i~i~~~ 132 (135)
T 1q5l_A 99 QIEVTFDIDADGILHVSAKDKNS---GKEQKITIKAS 132 (135)
T ss_dssp CEEEEEEECTTSEEEEEEEETTT---CCEEEEEEECS
T ss_pred EEEEEEEECCCCEEEEEEEECCC---CCEEEEEEecC
Confidence 6777764 8999999853332 24567777654
No 75
>2jn4_A Hypothetical protein FIXU, NIFT; structural genomics, PSI-2, protein structure initiative, northeast ST genomics consortium, NESG; NMR {Rhodopseudomonas palustris} SCOP: b.173.1.1
Probab=21.13 E-value=69 Score=19.56 Aligned_cols=23 Identities=13% Similarity=0.195 Sum_probs=17.0
Q ss_pred CCEEEEEEeCcccccCCCCeEEEeeeCC
Q 042820 77 NGALRIKVPELAEEKRRQPKVISINEEP 104 (120)
Q Consensus 77 nGiL~I~lpK~~~~~~~~~~~I~I~~~~ 104 (120)
+| |.+.+||+.-+ ...+.++..+
T Consensus 31 ~G-Ls~YVpKKDLE----E~VVs~E~~~ 53 (87)
T 2jn4_A 31 TG-HSAYVAKKDLE----ELIVEMENPA 53 (87)
T ss_dssp SC-EEEEETTTTEE----EEEEEESSSS
T ss_pred Cc-eEEEEeCCcch----hheeeeeccc
Confidence 57 99999999877 3666666443
No 76
>1o4z_A Beta-agarase B; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: EPE; 2.30A {Zobellia galactanivorans} SCOP: b.29.1.2
Probab=20.53 E-value=1.7e+02 Score=21.92 Aligned_cols=52 Identities=8% Similarity=-0.007 Sum_probs=31.4
Q ss_pred EEEecCcEEEEEEEEEccCCccccccCceEEEE-eeecc-eEEEEEECCCCccccceeEEE
Q 042820 17 IEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRA-ERTFG-KFWRQFRMPMSANLEHVKAHL 75 (120)
Q Consensus 17 I~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~-e~~~g-~f~r~~~lP~~vd~~~i~A~~ 75 (120)
+.+.+ +.|+|++.+..- .....+.++.-+ ...|| .|+-+++||.. -..-|-+
T Consensus 107 v~v~d-G~L~I~a~~~~g---~~~~tSg~i~Sk~~f~YGr~vEaRaKlp~g---G~wPAfW 160 (346)
T 1o4z_A 107 SYVAD-GELKMWATRKPG---SDKINMGCITSKTRVVYPVYIEARAKVMNS---TLASDVW 160 (346)
T ss_dssp EEEET-TEEEEECEECTT---SSCEEECEEEESSCBCSSEEEEEEEECCSS---SSEEEEE
T ss_pred EEEEC-CEEEEEEEecCC---CCcEEeeEEEeCccEeCCeEEEEEEEecCC---CceeeEE
Confidence 44568 999999987741 011122333322 25689 49999999975 3445543
No 77
>1nh2_C Transcription initiation factor IIA large chain; transcription/DNA; HET: 5IU; 1.90A {Saccharomyces cerevisiae} SCOP: b.56.1.1 PDB: 1ytf_C*
Probab=20.30 E-value=45 Score=20.02 Aligned_cols=22 Identities=23% Similarity=0.336 Sum_probs=15.9
Q ss_pred EEEEEECCCCccccceeEEEeCCEEEE
Q 042820 56 FWRQFRMPMSANLEHVKAHLENGALRI 82 (120)
Q Consensus 56 f~r~~~lP~~vd~~~i~A~~~nGiL~I 82 (120)
|.+.-+. -..-++.|++||++|
T Consensus 41 ydKV~R~-----KnKWKc~LKdGi~~i 62 (79)
T 1nh2_C 41 YDKVTRT-----KARWKCSLKDGVVTI 62 (79)
T ss_dssp EEEEEEE-----TTEEEEEEEEEEEEE
T ss_pred EEEEeee-----cceEEEEEeeeEEEE
Confidence 6554442 346789999999998
No 78
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=20.21 E-value=1.1e+02 Score=19.01 Aligned_cols=24 Identities=17% Similarity=0.239 Sum_probs=18.6
Q ss_pred cceEEEEEECCCCccccceeEEEeCCE
Q 042820 53 FGKFWRQFRMPMSANLEHVKAHLENGA 79 (120)
Q Consensus 53 ~g~f~r~~~lP~~vd~~~i~A~~~nGi 79 (120)
.|-|.++|.||.. ..+++.|.||-
T Consensus 48 ~Gw~~~TI~~~~~---~~l~~~F~dG~ 71 (102)
T 2c3v_A 48 EGXVKVTIEAEEG---SQLRAAFNNGS 71 (102)
T ss_dssp TTEEEEEECCCTT---CEEEEEEECSS
T ss_pred CCceEEEEecCCC---ceEEEEEeCCC
Confidence 5667899999853 58999998873
No 79
>2qzi_A Uncharacterized protein; APC86636, streptococcus thermophilus LMG 18311, structural G PSI-2, protein structure initiative; 2.20A {Streptococcus thermophilus}
Probab=20.19 E-value=1e+02 Score=19.35 Aligned_cols=23 Identities=9% Similarity=0.209 Sum_probs=20.1
Q ss_pred CCccccceeEEEeCCEEEEEEeC
Q 042820 64 MSANLEHVKAHLENGALRIKVPE 86 (120)
Q Consensus 64 ~~vd~~~i~A~~~nGiL~I~lpK 86 (120)
..++.++++..+.+.+..|.+|.
T Consensus 79 ~~~~~~~i~~~~~~~liEIsip~ 101 (103)
T 2qzi_A 79 DIVLMDKLRTVHTDKLIEISFPT 101 (103)
T ss_dssp GGBCTTCCEEEEETTEEEEEEEB
T ss_pred cccccccceEeccCCeEEEEccc
Confidence 35688899999999999999995
No 80
>1vd2_A Protein kinase C, IOTA type; PB1 domain, OPCA motif, APKC, ZIP/P62, MEK5, molecular recognition, transferase; NMR {Homo sapiens} SCOP: d.15.2.2 PDB: 1wmh_A
Probab=20.12 E-value=52 Score=20.02 Aligned_cols=17 Identities=18% Similarity=0.139 Sum_probs=14.8
Q ss_pred ceeEEEeCCEEEEEEeC
Q 042820 70 HVKAHLENGALRIKVPE 86 (120)
Q Consensus 70 ~i~A~~~nGiL~I~lpK 86 (120)
.|||.|.+.++.+++|.
T Consensus 8 kvK~~~~gdi~~~~v~~ 24 (89)
T 1vd2_A 8 RVKAYYRGDIMITHFEP 24 (89)
T ss_dssp EEEEESSSCEEEEEECT
T ss_pred EEEEEeCCeEEEEECCC
Confidence 68899998899999986
Done!