RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= 042820
         (120 letters)



>d1gmea_ b.15.1.1 (A:) Small heat shock protein {Wheat (Triticum
           aestivum) [TaxId: 4565]}
          Length = 150

 Score = 68.3 bits (166), Expect = 2e-16
 Identities = 49/101 (48%), Positives = 65/101 (64%), Gaps = 5/101 (4%)

Query: 1   HVITLDSLGMKKDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQF 60
           HV   D  G+KK+EVK+EVE+  VL VSGE+  +   K     +KWHR ER+ GKF R+F
Sbjct: 54  HVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKN----DKWHRVERSSGKFVRRF 109

Query: 61  RMPMSANLEHVKAHLENGALRIKVPELAEEKRRQPKVISIN 101
           R+   A +E VKA LENG L + VP+ AE K+ + K I I+
Sbjct: 110 RLLEDAKVEEVKAGLENGVLTVTVPK-AEVKKPEVKAIQIS 149


>d1shsa_ b.15.1.1 (A:) Small heat shock protein {Archaeon
           Methanococcus jannaschii [TaxId: 2190]}
          Length = 115

 Score = 53.9 bits (129), Expect = 3e-11
 Identities = 15/99 (15%), Positives = 35/99 (35%), Gaps = 7/99 (7%)

Query: 2   VITLDSLGMKKDEVKIEVEENKVLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQFR 61
            +     G+ K+++ +    + +   +          E       +       + +R  +
Sbjct: 23  KVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESER----IIYSEIPEEEEIYRTIK 78

Query: 62  MPMSANLEHVKAHLENGALRIKVPELAEEKRRQPKVISI 100
           +P +   E+  A  ENG L + +P+         K I+I
Sbjct: 79  LPATVKEENASAKFENGVLSVILPKAESSI---KKGINI 114


>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase)
          {Human (Homo sapiens) [TaxId: 9606]}
          Length = 176

 Score = 24.9 bits (53), Expect = 2.4
 Identities = 11/37 (29%), Positives = 16/37 (43%)

Query: 24 VLRVSGEKKSDDYYKEGVEGEKWHRAERTFGKFWRQF 60
          +LRV   KKS D+Y   +      + +    KF   F
Sbjct: 28 MLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYF 64


>d1fyva_ c.23.2.1 (A:) Toll-like receptor 1, TLR1 {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 161

 Score = 23.9 bits (51), Expect = 5.1
 Identities = 6/24 (25%), Positives = 11/24 (45%)

Query: 45  KWHRAERTFGKFWRQFRMPMSANL 68
           +W + +   G FW   R  ++  L
Sbjct: 133 EWPKEKSKRGLFWANLRAAINIKL 156


>d1xrha_ c.122.1.1 (A:) Ureidoglycolate dehydrogenase AllD
           {Escherichia coli [TaxId: 562]}
          Length = 343

 Score = 24.0 bits (51), Expect = 7.3
 Identities = 8/48 (16%), Positives = 21/48 (43%), Gaps = 4/48 (8%)

Query: 60  FRMPMSANLEHVKA-HLENGALRIKVP---ELAEEKRRQPKVISINEE 103
           FR  +S  +  + A     G  ++  P   +  ++++   + I I ++
Sbjct: 280 FRQHLSQTMRELNAITPAPGFNQVYYPGQDQDIKQRKAAVEGIEIVDD 327


>d3pmga2 c.84.1.1 (A:191-303) Phosphoglucomutase {Rabbit
           (Oryctolagus cuniculus) [TaxId: 9986]}
          Length = 113

 Score = 23.2 bits (49), Expect = 7.4
 Identities = 7/34 (20%), Positives = 15/34 (44%)

Query: 77  NGALRIKVPELAEEKRRQPKVISINEEPAGNSSG 110
           +G +   V ++  E+   P   ++N  P  +  G
Sbjct: 35  HGVVGPYVKKILCEELGAPANSAVNCVPLEDFGG 68


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.311    0.129    0.363 

Gapped
Lambda     K      H
   0.267   0.0495    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 438,030
Number of extensions: 19239
Number of successful extensions: 47
Number of sequences better than 10.0: 1
Number of HSP's gapped: 45
Number of HSP's successfully gapped: 14
Length of query: 120
Length of database: 2,407,596
Length adjustment: 74
Effective length of query: 46
Effective length of database: 1,391,576
Effective search space: 64012496
Effective search space used: 64012496
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 47 (22.4 bits)