BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042823
(477 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 235 bits (599), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 152/457 (33%), Positives = 231/457 (50%), Gaps = 28/457 (6%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89
MLG+G FG C + T + YA K I K + + I RE+++ L PN+++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVI-NKASAKNKDTSTILREVELLKKLD-HPNIMKL 86
Query: 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRD 149
ED ++ ++V EL GG+LFD II + SE DAA +++ + + + H ++HRD
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRD 146
Query: 150 LKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRRYGKEIDIW 209
LKPEN S++ + +K+ DFG + F++ +D +G+ +YIAPEVLR Y ++ D+W
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVW 206
Query: 210 SAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPK 269
SAGVILYILLSG PPF+ + + + G+ FD W +IS AKDL+R+MLT P
Sbjct: 207 SAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPS 266
Query: 270 RRITAAQVLEHPWLR----ESGEASDDTSVILRMKQFRRMNKLKKLTIKVIVEYLPD--- 322
RITA Q LEHPW++ E+ SD S+ M R+ KKL ++ Y+
Sbjct: 267 LRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALL-YMASKLT 325
Query: 323 --EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESL 380
+ET+ L E F ++DT+ +G L DEL G + L D L++ ST+E
Sbjct: 326 TLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEF-MRLKGVDSNSLIQ--NEGSTIEDQ 382
Query: 381 CENL-PTKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQYMEAGDIDG 439
++L P +D D S ++ S + + + D DG
Sbjct: 383 IDSLMPL------------LDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDG 430
Query: 440 NGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
+G I + E L + E LE + +D N D
Sbjct: 431 SGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKD 467
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 145/456 (31%), Positives = 233/456 (51%), Gaps = 66/456 (14%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G +G LC + T+ A K I +K + + N + E+ + L L PN+++
Sbjct: 43 KKLGSGAYGEVLLCRDKVTHVERAIK-IIRKTSVSTSSNSKLLEEVAV-LKLLDHPNIMK 100
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ED+ ++VME +GG+LFD II + +E DAA +++ +++ V H ++HR
Sbjct: 101 LYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHR 160
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRRYGKEIDI 208
DLKPEN S++ +AL+K+ DFG + +FE + ++ +G+ +YIAPEVLR++Y ++ D+
Sbjct: 161 DLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDV 220
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDP 268
WS GVIL+ILL+G PPF +T + + +G+ FD+ W ++S AKDL+++ML D
Sbjct: 221 WSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDS 280
Query: 269 KRRITAAQVLEHPWLRE------SG-EASDDTSVILRMKQFRRMNKLKKLTIKVIVEYL- 320
+RRI+A Q LEHPW++E SG E + I M++F+ KL + + + L
Sbjct: 281 QRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLT 340
Query: 321 PDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESL 380
EET+ L + F +D + +G L D + L++ S E
Sbjct: 341 SQEETKELTDIFRHIDKNGDGQL-------------------DRQELIDGYSKLSGEEVA 381
Query: 381 CENLPTKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQYMEAGDIDGN 440
+LP E SEV+ + A D D N
Sbjct: 382 VFDLPQIE-------------------------------------SEVDAILGAADFDRN 404
Query: 441 GNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
G ID EFV + D L + + LE AFQ D++ +
Sbjct: 405 GYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGN 440
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 224 bits (570), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 141/454 (31%), Positives = 236/454 (51%), Gaps = 30/454 (6%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G +G LC + T A K I K + + + E+ + L PN+++
Sbjct: 10 KKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD-HPNIMK 68
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ED+ ++VME+ GG+LFD II + SE DAA +++ +++ H ++HR
Sbjct: 69 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHR 128
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRRYGKEIDI 208
DLKPEN S+ +AL+K+ DFG + FE G ++ +G+ +YIAPEVLR++Y ++ D+
Sbjct: 129 DLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDEKCDV 188
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDP 268
WS GVILYILL G PPF +T + + +G+ FD W +S AK LV+ MLT +P
Sbjct: 189 WSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEP 248
Query: 269 KRRITAAQVLEHPWLRE--SGEASDD-----TSVILRMKQFRRMNKLKKLTIKVIVEYLP 321
+RI+A + L HPW+ + S + +D T + MK+F+ KL + + + L
Sbjct: 249 SKRISAEEALNHPWIVKFCSQKHTDVGKHALTGALGNMKKFQSSQKLAQAAMLFMGSKLT 308
Query: 322 D-EETQALKEKFIEMDTDKNGTLSYDELRAGLTKV----GSMLTEFD-------VKHLME 369
EET+ L + F ++D + +G L EL G K+ G +++ D V H+++
Sbjct: 309 TLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQ 368
Query: 370 AV---KNS----STLESLC-ENLPTKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXX 421
+V +N S ++C + +++L+ F++ D+D S +T
Sbjct: 369 SVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKIT--NEELGRLFGVT 426
Query: 422 XXXXSEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455
+Q ++ D + +G +D EFV +M I
Sbjct: 427 EVDDETWHQVLQECDKNNDGEVDFEEFVEMMQKI 460
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/455 (30%), Positives = 226/455 (49%), Gaps = 63/455 (13%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R+LG+G FG LC + T + A K I+K+ + + + + RE+Q+ L PN+++
Sbjct: 55 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMK 113
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ED+ ++V E+ GG+LFD II++ SE DAA ++R +++ + H ++HR
Sbjct: 114 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHR 173
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRRYGKEIDI 208
DLKPEN S+ +A +++ DFG + FE + +D +G+ +YIAPEVL Y ++ D+
Sbjct: 174 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDV 233
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDP 268
WS GVILYILLSG PPF + + +G+ F+ W +S +AKDL+R+MLT P
Sbjct: 234 WSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVP 293
Query: 269 KRRITAAQVLEHPWLRE------SGEASDDTSVILRMKQFRRMNKLKKLTIKVIVEYLPD 322
RI+A L+H W++ S + + IL ++QF+ KL + + + L
Sbjct: 294 SMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTS 353
Query: 323 E-ETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLC 381
+ ET+ L F +MD + +G L
Sbjct: 354 QDETKELTAIFHKMDKNGDGQL-------------------------------------- 375
Query: 382 ENLPTKEKQKLMEKFRE-MDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQYMEAGDIDGN 440
++ +L+E ++E M D L EV+Q ++A D D N
Sbjct: 376 ------DRAELIEGYKELMRMKGQDASMLDASAVE----------HEVDQVLDAVDFDKN 419
Query: 441 GNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNS 475
G I+ EFV + D L + E LE+AF+ D ++
Sbjct: 420 GYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDN 454
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/455 (30%), Positives = 226/455 (49%), Gaps = 63/455 (13%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R+LG+G FG LC + T + A K I+K+ + + + + RE+Q+ L PN+++
Sbjct: 56 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMK 114
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ED+ ++V E+ GG+LFD II++ SE DAA ++R +++ + H ++HR
Sbjct: 115 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHR 174
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRRYGKEIDI 208
DLKPEN S+ +A +++ DFG + FE + +D +G+ +YIAPEVL Y ++ D+
Sbjct: 175 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDV 234
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDP 268
WS GVILYILLSG PPF + + +G+ F+ W +S +AKDL+R+MLT P
Sbjct: 235 WSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVP 294
Query: 269 KRRITAAQVLEHPWLRE------SGEASDDTSVILRMKQFRRMNKLKKLTIKVIVEYLPD 322
RI+A L+H W++ S + + IL ++QF+ KL + + + L
Sbjct: 295 SMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTS 354
Query: 323 E-ETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLC 381
+ ET+ L F +MD + +G L
Sbjct: 355 QDETKELTAIFHKMDKNGDGQL-------------------------------------- 376
Query: 382 ENLPTKEKQKLMEKFRE-MDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQYMEAGDIDGN 440
++ +L+E ++E M D L EV+Q ++A D D N
Sbjct: 377 ------DRAELIEGYKELMRMKGQDASMLDASAVE----------HEVDQVLDAVDFDKN 420
Query: 441 GNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNS 475
G I+ EFV + D L + E LE+AF+ D ++
Sbjct: 421 GYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDN 455
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 110/276 (39%), Positives = 164/276 (59%), Gaps = 4/276 (1%)
Query: 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREI 74
G D+ +Y +GRG +G + + T A K I PK + + D ++EI
Sbjct: 1 GSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKI---PKYFVEDVDRFKQEI 57
Query: 75 QIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIV 134
+I L PN++ T+ED T +++VMELC GG+LF+R++ K E DAA +++ ++
Sbjct: 58 EIMKSLD-HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVL 116
Query: 135 NAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
+AV CH + V HRDLKPENF F++ ++ LK+ DFG A F+ G++ R VG+ +Y++
Sbjct: 117 SAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVS 176
Query: 195 PEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254
P+VL YG E D WSAGV++Y+LL G PPF A T I +G F W ++S
Sbjct: 177 PQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSP 236
Query: 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEAS 290
A+ L+RR+LTK PK+RIT+ Q LEH W + +S
Sbjct: 237 QAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSS 272
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 218 bits (556), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 110/276 (39%), Positives = 164/276 (59%), Gaps = 4/276 (1%)
Query: 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREI 74
G D+ +Y +GRG +G + + T A K I PK + + D ++EI
Sbjct: 18 GSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKI---PKYFVEDVDRFKQEI 74
Query: 75 QIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIV 134
+I L PN++ T+ED T +++VMELC GG+LF+R++ K E DAA +++ ++
Sbjct: 75 EIMKSLD-HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVL 133
Query: 135 NAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
+AV CH + V HRDLKPENF F++ ++ LK+ DFG A F+ G++ R VG+ +Y++
Sbjct: 134 SAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVS 193
Query: 195 PEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254
P+VL YG E D WSAGV++Y+LL G PPF A T I +G F W ++S
Sbjct: 194 PQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSP 253
Query: 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEAS 290
A+ L+RR+LTK PK+RIT+ Q LEH W + +S
Sbjct: 254 QAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSS 289
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 218 bits (556), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 225/454 (49%), Gaps = 61/454 (13%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R+LG+G FG LC + T + A K I+K+ + + + + RE+Q+ L PN+++
Sbjct: 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMK 90
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ED+ ++V E+ GG+LFD II++ SE DAA ++R +++ + H ++HR
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHR 150
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRRYGKEIDI 208
DLKPEN S+ +A +++ DFG + FE + +D +G+ +YIAPEVL Y ++ D+
Sbjct: 151 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDV 210
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDP 268
WS GVILYILLSG PPF + + +G+ F+ W +S +AKDL+R+MLT P
Sbjct: 211 WSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVP 270
Query: 269 KRRITAAQVLEHPWLRE------SGEASDDTSVILRMKQFRRMNKLKKLTIKVIVEYLPD 322
RI+A L+H W++ S + + IL ++QF+ KL + + + L
Sbjct: 271 SMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTS 330
Query: 323 E-ETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLC 381
+ ET+ L F +MD + +G + D L+E K
Sbjct: 331 QDETKELTAIFHKMDKNGDG-------------------QLDRAELIEGYK--------- 362
Query: 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQYMEAGDIDGNG 441
+ M ++ L S EV+Q ++A D D NG
Sbjct: 363 -------------ELMRMKGQDASMLDASAVE------------HEVDQVLDAVDFDKNG 397
Query: 442 NIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNS 475
I+ EFV + D L + E LE+AF+ D ++
Sbjct: 398 YIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDN 431
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 173/291 (59%), Gaps = 12/291 (4%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LGRG + Y C + T +PYA K + K + ++R EI + L LS PN+++ K
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKT-----VDKKIVRTEIGVLLRLS-HPNIIKLK 114
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
+E T + +V+EL GG+LFDRI+ KGY SERDAA ++ I+ AV H G++HRDL
Sbjct: 115 EIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDL 174
Query: 151 KPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIW 209
KPEN + + +A LK+ DFG + + E + + + G+ Y APE+LR YG E+D+W
Sbjct: 175 KPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMW 234
Query: 210 SAGVILYILLSGVPPFWAE-TKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDP 268
S G+I YILL G PF+ E + + IL E F + W +S AKDLVR+++ DP
Sbjct: 235 SVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDP 294
Query: 269 KRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMNKLKKL--TIKVIV 317
K+R+T Q L+HPW+ +G+A++ + K+ + N +KL +K +V
Sbjct: 295 KKRLTTFQALQHPWV--TGKAANFVHMDTAQKKLQEFNARRKLKAAVKAVV 343
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/454 (30%), Positives = 221/454 (48%), Gaps = 61/454 (13%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R+LG+G FG LC + T + A K I+K+ + + + + RE+Q+ L PN+ +
Sbjct: 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIXK 90
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ED+ ++V E+ GG+LFD II++ SE DAA ++R +++ + H ++HR
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHR 150
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRRYGKEIDI 208
DLKPEN S+ +A +++ DFG + FE + +D +G+ +YIAPEVL Y ++ D+
Sbjct: 151 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDEKCDV 210
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDP 268
WS GVILYILLSG PPF + + +G+ F+ W +S +AKDL+R+ LT P
Sbjct: 211 WSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVP 270
Query: 269 KRRITAAQVLEHPWLRE------SGEASDDTSVILRMKQFRRMNKLKKLTIKVIVEYLPD 322
RI+A L+H W++ S + + IL ++QF+ KL + + L
Sbjct: 271 SXRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYXGSKLTS 330
Query: 323 E-ETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLC 381
+ ET+ L F + D + +G L D L+E K
Sbjct: 331 QDETKELTAIFHKXDKNGDGQL-------------------DRAELIEGYKE-------- 363
Query: 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQYMEAGDIDGNG 441
+ + + D D + EV+Q ++A D D NG
Sbjct: 364 -----------LXRXKGQDASXLDASAVE---------------HEVDQVLDAVDFDKNG 397
Query: 442 NIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNS 475
I+ EFV + D L + E LE+AF+ D ++
Sbjct: 398 YIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDN 431
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 212 bits (539), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 104/256 (40%), Positives = 155/256 (60%), Gaps = 2/256 (0%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89
MLG+G FG C + T + YA K I K + + I RE+++ L PN+++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVI-NKASAKNKDTSTILREVELLKKLD-HPNIMKL 86
Query: 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRD 149
ED ++ ++V EL GG+LFD II + SE DAA +++ + + + H ++HRD
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRD 146
Query: 150 LKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRRYGKEIDIW 209
LKPEN S++ + +K+ DFG + F++ +D +G+ +YIAPEVLR Y ++ D+W
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVW 206
Query: 210 SAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPK 269
SAGVILYILLSG PPF+ + + + G+ FD W +IS AKDL+R+MLT P
Sbjct: 207 SAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPS 266
Query: 270 RRITAAQVLEHPWLRE 285
RITA Q LEHPW+++
Sbjct: 267 LRITATQCLEHPWIQK 282
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 212 bits (539), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 104/256 (40%), Positives = 155/256 (60%), Gaps = 2/256 (0%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89
MLG+G FG C + T + YA K I K + + I RE+++ L PN+++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVI-NKASAKNKDTSTILREVELLKKLD-HPNIMKL 86
Query: 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRD 149
ED ++ ++V EL GG+LFD II + SE DAA +++ + + + H ++HRD
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRD 146
Query: 150 LKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRRYGKEIDIW 209
LKPEN S++ + +K+ DFG + F++ +D +G+ +YIAPEVLR Y ++ D+W
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVW 206
Query: 210 SAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPK 269
SAGVILYILLSG PPF+ + + + G+ FD W +IS AKDL+R+MLT P
Sbjct: 207 SAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPS 266
Query: 270 RRITAAQVLEHPWLRE 285
RITA Q LEHPW+++
Sbjct: 267 LRITATQCLEHPWIQK 282
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 211 bits (537), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 107/273 (39%), Positives = 163/273 (59%), Gaps = 12/273 (4%)
Query: 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKP---KMRLAENDM-IR 71
K ED+ + F LG G F L E +T + +A K I KK K EN++ +
Sbjct: 15 KQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVL 74
Query: 72 REIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLR 131
R+I+ N+V + YE +++VM+L GG+LFDRI+ KG+ +E+DA+T++R
Sbjct: 75 RKIK-------HENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIR 127
Query: 132 AIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF 191
+++AV H MG++HRDLKPEN + S+D+ + + ++DFG + + +G V G+
Sbjct: 128 QVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPG 187
Query: 192 YIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP 250
Y+APEVL ++ Y K +D WS GVI YILL G PPF+ E ++ IL+ E +FD+ W
Sbjct: 188 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWD 247
Query: 251 SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
IS +AKD +R ++ KDP +R T Q HPW+
Sbjct: 248 DISDSAKDFIRNLMEKDPNKRYTCEQAARHPWI 280
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/281 (38%), Positives = 169/281 (60%), Gaps = 6/281 (2%)
Query: 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQ 75
K ED+ Y F +LG G F L + T + A K IAKK + E M EI
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKK-ALEGKEGSM-ENEIA 68
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN 135
+ L+ PN+V YE ++++M+L GG+LFDRI+ KG+ +ERDA+ ++ +++
Sbjct: 69 V-LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAP 195
AV H +G++HRDLKPEN + S D+++ + ++DFG + + + G V G+ Y+AP
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 196 EVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254
EVL ++ Y K +D WS GVI YILL G PPF+ E ++ IL+ E +FD+ W IS
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+AKD +R ++ KDP++R T Q L+HPW+ +G+ + D ++
Sbjct: 248 SAKDFIRHLMEKDPEKRFTCEQALQHPWI--AGDTALDKNI 286
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 209 bits (531), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 108/281 (38%), Positives = 169/281 (60%), Gaps = 6/281 (2%)
Query: 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQ 75
K ED+ Y F +LG G F L + T + A K IAK+ + E M EI
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEA-LEGKEGSM-ENEIA 68
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN 135
+ L+ PN+V YE ++++M+L GG+LFDRI+ KG+ +ERDA+ ++ +++
Sbjct: 69 V-LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAP 195
AV H +G++HRDLKPEN + S D+++ + ++DFG + + + G V G+ Y+AP
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 196 EVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254
EVL ++ Y K +D WS GVI YILL G PPF+ E ++ IL+ E +FD+ W IS
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+AKD +R ++ KDP++R T Q L+HPW+ +G+ + D ++
Sbjct: 248 SAKDFIRHLMEKDPEKRFTCEQALQHPWI--AGDTALDKNI 286
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 108/281 (38%), Positives = 169/281 (60%), Gaps = 6/281 (2%)
Query: 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQ 75
K ED+ Y F +LG G F L + T + A K IAK+ + E M EI
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKE-ALEGKEGSM-ENEIA 68
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN 135
+ L+ PN+V YE ++++M+L GG+LFDRI+ KG+ +ERDA+ ++ +++
Sbjct: 69 V-LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAP 195
AV H +G++HRDLKPEN + S D+++ + ++DFG + + + G V G+ Y+AP
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 196 EVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254
EVL ++ Y K +D WS GVI YILL G PPF+ E ++ IL+ E +FD+ W IS
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+AKD +R ++ KDP++R T Q L+HPW+ +G+ + D ++
Sbjct: 248 SAKDFIRHLMEKDPEKRFTCEQALQHPWI--AGDTALDKNI 286
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 113/286 (39%), Positives = 167/286 (58%), Gaps = 10/286 (3%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LG+G F V C + + YA K I K K+ ++ + RE +I L PN+V
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTK-KLSARDHQKLEREARICRLLK-HPNIVRLH 87
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
+ +E +++ +L GG+LF+ I+A+ Y SE DA+ ++ I+ AV CH MGV+HRDL
Sbjct: 88 DSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDL 147
Query: 151 KPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLRR-RYGKEIDI 208
KPEN S+ A +K+ DFG A+ E E Q + G+ Y++PEVLR+ YGK +D+
Sbjct: 148 KPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDL 207
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDP 268
W+ GVILYILL G PPFW E + Y I G DF + W +++ AKDL+ +MLT +P
Sbjct: 208 WACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINP 267
Query: 269 KRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMNKLKKLTIK 314
+RITAA+ L+HPW+ S ++V M + ++ LKK +
Sbjct: 268 SKRITAAEALKHPWI------SHRSTVASCMHRQETVDCLKKFNAR 307
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 108/281 (38%), Positives = 169/281 (60%), Gaps = 6/281 (2%)
Query: 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQ 75
K ED+ Y F +LG G F L + T + A K IAK+ + E M EI
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKE-ALEGKEGSM-ENEIA 68
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN 135
+ L+ PN+V YE ++++M+L GG+LFDRI+ KG+ +ERDA+ ++ +++
Sbjct: 69 V-LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAP 195
AV H +G++HRDLKPEN + S D+++ + ++DFG + + + G V G+ Y+AP
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 196 EVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254
EVL ++ Y K +D WS GVI YILL G PPF+ E ++ IL+ E +FD+ W IS
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+AKD +R ++ KDP++R T Q L+HPW+ +G+ + D ++
Sbjct: 248 SAKDFIRHLMEKDPEKRFTCEQALQHPWI--AGDTALDKNI 286
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 114/316 (36%), Positives = 175/316 (55%), Gaps = 4/316 (1%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LG+G F V C + T + YA K I K K+ ++ + RE +I L PN+V
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTK-KLSARDHQKLEREARI-CRLLKHPNIVRLH 69
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
+ +E ++V +L GG+LF+ I+A+ Y SE DA+ ++ I+ +VN CH G++HRDL
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDL 129
Query: 151 KPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLRR-RYGKEIDI 208
KPEN S+ A +K+ DFG A+ + + Q + G+ Y++PEVLR+ YGK +D+
Sbjct: 130 KPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDM 189
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDP 268
W+ GVILYILL G PPFW E + Y I G DF + W +++ AKDL+ +MLT +P
Sbjct: 190 WACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINP 249
Query: 269 KRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMNKLKKLTIKVIVEYLPDEETQAL 328
+RITA++ L+HPW+ + + + ++ N +KL ++ L A
Sbjct: 250 AKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILTTMLATRNFSAA 309
Query: 329 KEKFIEMDTDKNGTLS 344
K + D K T S
Sbjct: 310 KSLLKKPDGVKESTES 325
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 112/287 (39%), Positives = 169/287 (58%), Gaps = 13/287 (4%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LG+G F V C + T + YA K I K K+ ++ + RE +I L PN+V
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTK-KLSARDHQKLEREARI-CRLLKHPNIVRLH 69
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
+ +E ++V +L GG+LF+ I+A+ Y SE DA+ ++ I+ +VN CH G++HRDL
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDL 129
Query: 151 KPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLRR-RYGKEIDI 208
KPEN S+ A +K+ DFG A+ + + Q + G+ Y++PEVLR+ YGK +D+
Sbjct: 130 KPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDM 189
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDP 268
W+ GVILYILL G PPFW E + Y I G DF + W +++ AKDL+ +MLT +P
Sbjct: 190 WACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINP 249
Query: 269 KRRITAAQVLEHPWLRESGEASDDTSVILR------MKQFRRMNKLK 309
+RITA++ L+HPW+ + S S++ R +K+F KLK
Sbjct: 250 AKRITASEALKHPWI---CQRSTVASMMHRQETVDCLKKFNARRKLK 293
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 167/292 (57%), Gaps = 7/292 (2%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LG+G F V C + + YA I K K+ ++ + RE +I L PN+V
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTK-KLSARDHQKLEREARI-CRLLKHPNIVRLH 76
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
+ +E +++ +L GG+LF+ I+A+ Y SE DA+ ++ I+ AV CH MGV+HR+L
Sbjct: 77 DSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNL 136
Query: 151 KPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLRR-RYGKEIDI 208
KPEN S+ A +K+ DFG A+ E E Q + G+ Y++PEVLR+ YGK +D+
Sbjct: 137 KPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDL 196
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDP 268
W+ GVILYILL G PPFW E + Y I G DF + W +++ AKDL+ +MLT +P
Sbjct: 197 WACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINP 256
Query: 269 KRRITAAQVLEHPWLRESGEASD---DTSVILRMKQFRRMNKLKKLTIKVIV 317
+RITAA+ L+HPW+ + + +K+F KLK + V++
Sbjct: 257 SKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTVML 308
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 109/284 (38%), Positives = 163/284 (57%), Gaps = 7/284 (2%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G+G F V C + T YA K I K K+ ++ + RE +I L N+V
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTK-KLSARDHQKLEREARICRLLK-HSNIVRLH 69
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
+ +E ++V +L GG+LF+ I+A+ Y SE DA+ ++ I+ AV CH MGV+HRDL
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDL 129
Query: 151 KPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLRRR-YGKEIDI 208
KPEN S+ A +K+ DFG A+ + + Q + G+ Y++PEVLR+ YGK +DI
Sbjct: 130 KPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDI 189
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDP 268
W+ GVILYILL G PPFW E + Y I G DF + W +++ AK+L+ +MLT +P
Sbjct: 190 WACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINP 249
Query: 269 KRRITAAQVLEHPWLRESGEASD---DTSVILRMKQFRRMNKLK 309
+RITA + L+HPW+ + + + +K+F KLK
Sbjct: 250 AKRITAHEALKHPWVCQRSTVASMMHRQETVECLKKFNARRKLK 293
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 201 bits (511), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 165/292 (56%), Gaps = 4/292 (1%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LG+G F V C + + + YA K I K K+ ++ + RE +I L PN+V
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTK-KLSARDHQKLEREARI-CRLLKHPNIVRLH 96
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
+ +E ++V +L GG+LF+ I+A+ Y SE DA+ + I+ +VN H ++HRDL
Sbjct: 97 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDL 156
Query: 151 KPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLRR-RYGKEIDI 208
KPEN S+ A +K+ DFG A+ + E Q + G+ Y++PEVLR+ YGK +DI
Sbjct: 157 KPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDI 216
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDP 268
W+ GVILYILL G PPFW E + Y I G DF + W +++ AK+L+ +MLT +P
Sbjct: 217 WACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINP 276
Query: 269 KRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMNKLKKLTIKVIVEYL 320
+RITA Q L+HPW+ + + ++ R+ N +KL ++ L
Sbjct: 277 AKRITADQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLKGAILTTML 328
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 97/256 (37%), Positives = 155/256 (60%), Gaps = 1/256 (0%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R+LG+G FG LC + T + A K I+K+ + + + + RE+Q+ L PN+++
Sbjct: 38 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMK 96
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ED+ ++V E+ GG+LFD II++ SE DAA ++R +++ + H ++HR
Sbjct: 97 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHR 156
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRRYGKEIDI 208
DLKPEN S+ +A +++ DFG + FE + +D +G+ +YIAPEVL Y ++ D+
Sbjct: 157 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDV 216
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDP 268
WS GVILYILLSG PPF + + +G+ F+ W +S +AKDL+R+MLT P
Sbjct: 217 WSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVP 276
Query: 269 KRRITAAQVLEHPWLR 284
RI+A L+H W++
Sbjct: 277 SMRISARDALDHEWIQ 292
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/255 (38%), Positives = 150/255 (58%), Gaps = 1/255 (0%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G +G LC + T A K I K + + + E+ + L PN+++
Sbjct: 27 KKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD-HPNIMK 85
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ED+ ++VME+ GG+LFD II + SE DAA +++ +++ H ++HR
Sbjct: 86 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHR 145
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRRYGKEIDI 208
DLKPEN S+ +AL+K+ DFG + FE G ++ +G+ +YIAPEVLR++Y ++ D+
Sbjct: 146 DLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDEKCDV 205
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDP 268
WS GVILYILL G PPF +T + + +G+ FD W +S AK LV+ MLT +P
Sbjct: 206 WSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEP 265
Query: 269 KRRITAAQVLEHPWL 283
+RI+A + L HPW+
Sbjct: 266 SKRISAEEALNHPWI 280
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 198 bits (504), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 97/260 (37%), Positives = 156/260 (60%), Gaps = 6/260 (2%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
+ F +LG G F +L + T + +A K I K P R + + EI + + +
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR---DSSLENEIAVLKKIKHE- 66
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
N+V + YE T ++VM+L GG+LFDRI+ +G +E+DA+ V++ +++AV H G
Sbjct: 67 NIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENG 126
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRR-YG 203
++HRDLKPEN +++ ++N+ + +TDFG + + E+ + G+ Y+APEVL ++ Y
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKM-EQNGIMSTACGTPGYVAPEVLAQKPYS 185
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
K +D WS GVI YILL G PPF+ ET+ ++ I +G +F++ W IS +AKD + +
Sbjct: 186 KAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHL 245
Query: 264 LTKDPKRRITAAQVLEHPWL 283
L KDP R T + L HPW+
Sbjct: 246 LEKDPNERYTCEKALSHPWI 265
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 166/292 (56%), Gaps = 8/292 (2%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ-PNVVEF 89
LG+G F V C +T +A K I K +L+ D + E + R+ Q PN+V
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTK---KLSARDFQKLEREARICRKLQHPNIVRL 93
Query: 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRD 149
+ ++E+ ++V +L GG+LF+ I+A+ + SE DA+ ++ I+ ++ CHS G++HR+
Sbjct: 94 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRN 153
Query: 150 LKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDI 208
LKPEN S+ A +K+ DFG A+ + + + G+ Y++PEVL++ Y K +DI
Sbjct: 154 LKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDI 213
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDP 268
W+ GVILYILL G PPFW E + Y I G D+ + W +++ AK L+ MLT +P
Sbjct: 214 WACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNP 273
Query: 269 KRRITAAQVLEHPWL--RES-GEASDDTSVILRMKQFRRMNKLKKLTIKVIV 317
K+RITA Q L+ PW+ RE A + +K+F KLK + ++
Sbjct: 274 KKRITADQALKVPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTMI 325
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 194 bits (493), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 97/255 (38%), Positives = 152/255 (59%), Gaps = 5/255 (1%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ-PNVVEF 89
LG+G F V C +T +A K I K +L+ D + E + R+ Q PN+V
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTK---KLSARDFQKLEREARICRKLQHPNIVRL 70
Query: 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRD 149
+ ++E+ ++V +L GG+LF+ I+A+ + SE DA+ ++ I+ ++ CHS G++HR+
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRN 130
Query: 150 LKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDI 208
LKPEN S+ A +K+ DFG A+ + + + G+ Y++PEVL++ Y K +DI
Sbjct: 131 LKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDI 190
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDP 268
W+ GVILYILL G PPFW E + Y I G D+ + W +++ AK L+ MLT +P
Sbjct: 191 WACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNP 250
Query: 269 KRRITAAQVLEHPWL 283
K+RITA Q L+ PW+
Sbjct: 251 KKRITADQALKVPWI 265
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 194 bits (493), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 118/367 (32%), Positives = 196/367 (53%), Gaps = 19/367 (5%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKP--KMRLAENDM--------IRREI 74
YF R LG G +G LC E + + A K I K K R ++++ I EI
Sbjct: 38 YFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEI 97
Query: 75 QIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIV 134
+ L PN+++ +ED+ ++V E EGG+LF++II + E DAA +++ I+
Sbjct: 98 SLLKSLD-HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQIL 156
Query: 135 NAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
+ + H ++HRD+KPEN +++ +K+ DFG + F + RD +G+ +YIA
Sbjct: 157 SGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIA 216
Query: 195 PEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254
PEVL+++Y ++ D+WS GVI+YILL G PPF + + + +G+ FD + W +IS
Sbjct: 217 PEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISD 276
Query: 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG---EASDDTSV---ILRMKQFRRMNKL 308
AK+L++ MLT D +R TA + L W+++ SD ++ + M++F KL
Sbjct: 277 EAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKL 336
Query: 309 KKLTIKVIVEYLPD-EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEF-DVKH 366
+ I I L EE + L + F ++D + +G L EL G + + E ++K+
Sbjct: 337 AQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKN 396
Query: 367 LMEAVKN 373
+ E V N
Sbjct: 397 VEEEVDN 403
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 427 EVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLD 472
EV+ ++ D D NG I+ EF+++ D L + E L +AF D
Sbjct: 400 EVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFD 445
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/255 (38%), Positives = 152/255 (59%), Gaps = 5/255 (1%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ-PNVVEF 89
LG+G F V C +T +A K I K +L+ D + E + R+ Q PN+V
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTK---KLSARDFQKLEREARICRKLQHPNIVRL 70
Query: 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRD 149
+ ++E+ ++V +L GG+LF+ I+A+ + SE DA+ ++ I+ ++ CHS G++HR+
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRN 130
Query: 150 LKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDI 208
LKPEN S+ A +K+ DFG A+ + + + G+ Y++PEVL++ Y K +DI
Sbjct: 131 LKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDI 190
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDP 268
W+ GVILYILL G PPFW E + Y I G D+ + W +++ AK L+ MLT +P
Sbjct: 191 WACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNP 250
Query: 269 KRRITAAQVLEHPWL 283
K+RITA Q L+ PW+
Sbjct: 251 KKRITADQALKVPWI 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/255 (38%), Positives = 152/255 (59%), Gaps = 5/255 (1%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ-PNVVEF 89
LG+G F V C +T +A K I K +L+ D + E + R+ Q PN+V
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTK---KLSARDFQKLEREARICRKLQHPNIVRL 69
Query: 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRD 149
+ ++E+ ++V +L GG+LF+ I+A+ + SE DA+ ++ I+ ++ CHS G++HR+
Sbjct: 70 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRN 129
Query: 150 LKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDI 208
LKPEN S+ A +K+ DFG A+ + + + G+ Y++PEVL++ Y K +DI
Sbjct: 130 LKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDI 189
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDP 268
W+ GVILYILL G PPFW E + Y I G D+ + W +++ AK L+ MLT +P
Sbjct: 190 WACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNP 249
Query: 269 KRRITAAQVLEHPWL 283
K+RITA Q L+ PW+
Sbjct: 250 KKRITADQALKVPWI 264
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/271 (39%), Positives = 153/271 (56%), Gaps = 6/271 (2%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK---PKMRLAENDMIRREIQ 75
EDV HY G LG GQF + C + T + YA K I K+ R + I RE+
Sbjct: 8 EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 67
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN 135
I L PN++ +E++T V +++EL GG+LFD + K +E +A L+ I++
Sbjct: 68 I-LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD 126
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
V+ HS + H DLKPEN + ++ N +K+ DFG A E G +++I G+ ++A
Sbjct: 127 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVA 186
Query: 195 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253
PE++ G E D+WS GVI YILLSG PF ETK+ T I DFD + + + S
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTS 246
Query: 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
AKD +RR+L KDPKRR+ AQ LEH W++
Sbjct: 247 ELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 105/266 (39%), Positives = 151/266 (56%), Gaps = 6/266 (2%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK---PKMRLAENDMIRREIQIRLYL 80
HY G LG GQF + C + T + YA K I K+ R + I RE+ I L
Sbjct: 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI-LRE 64
Query: 81 SGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC 140
PN++ +E++T V +++EL GG+LFD + K +E +A L+ I++ V+
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 124
Query: 141 HSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR 199
HS + H DLKPEN + ++ N +K+ DFG A E G +++I G+ ++APE++
Sbjct: 125 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVN 184
Query: 200 RR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
G E D+WS GVI YILLSG PF ETK+ T I DFD + + + S AKD
Sbjct: 185 YEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKD 244
Query: 259 LVRRMLTKDPKRRITAAQVLEHPWLR 284
+RR+L KDPKRR+T AQ LEH W++
Sbjct: 245 FIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/266 (39%), Positives = 150/266 (56%), Gaps = 6/266 (2%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK---PKMRLAENDMIRREIQIRLYL 80
HY G LG GQF + C + T + YA K I K+ R + I RE+ I L
Sbjct: 27 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNI-LRE 85
Query: 81 SGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC 140
PN++ +E++T V +++EL GG+LFD + K +E +A L+ I++ V+
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 145
Query: 141 HSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR 199
HS + H DLKPEN + ++ N +K+ DFG A E G +++I G+ ++APE++
Sbjct: 146 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVN 205
Query: 200 RR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
G E D+WS GVI YILLSG PF ETK+ T I DFD + + + S AKD
Sbjct: 206 YEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKD 265
Query: 259 LVRRMLTKDPKRRITAAQVLEHPWLR 284
+RR+L KDPKRR+ AQ LEH W++
Sbjct: 266 FIRRLLVKDPKRRMXIAQSLEHSWIK 291
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 110/307 (35%), Positives = 171/307 (55%), Gaps = 13/307 (4%)
Query: 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACK--SIAKKPKMRLAENDMIRREIQ 75
+EDV Y ++G+G F V C T + +A K +AK + ++RE
Sbjct: 22 FEDV---YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS 78
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKG----YNSERDAATVLR 131
I ++ P++VE TY + +++V E +G DL I+ + SE A+ +R
Sbjct: 79 I-CHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 137
Query: 132 AIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL-LFEEGQVYRDIVGSG 190
I+ A+ CH ++HRD+KPEN S++++A +K+ DFG A+ L E G V VG+
Sbjct: 138 QILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTP 197
Query: 191 FYIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPW 249
++APEV++R YGK +D+W GVIL+ILLSG PF+ TK+ ++ I++G+ + W
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQW 256
Query: 250 PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMNKLK 309
IS +AKDLVRRML DP RIT + L HPWL+E + + ++Q R+ N +
Sbjct: 257 SHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARR 316
Query: 310 KLTIKVI 316
KL V+
Sbjct: 317 KLKGAVL 323
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 187 bits (476), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 165/294 (56%), Gaps = 8/294 (2%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDMIRREIQ 75
E+V +Y G LG GQF V C E ST YA K I K K R + I RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN 135
I L PNV+ YE++T V +++EL GG+LFD + K +E +A L+ I+N
Sbjct: 67 I-LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
V HS+ + H DLKPEN + R+ +K+ DFG A + G +++I G+ ++A
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 195 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253
PE++ G E D+WS GVI YILLSG PF +TK+ T + +F+ + + + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWL--RESGEASDDTSVILRMKQFRRM 305
+ AKD +RR+L KDPK+R+T L+HPW+ +++ +A + + M++F++
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVNMEKFKKF 299
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 153/271 (56%), Gaps = 6/271 (2%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDMIRREIQ 75
E+V +Y G LG GQF V C E ST YA K I K K R + I RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN 135
I L PNV+ YE++T V +++EL GG+LFD + K +E +A L+ I+N
Sbjct: 67 I-LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
V HS+ + H DLKPEN + R+ +K+ DFG A + G +++I G+ ++A
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVA 185
Query: 195 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253
PE++ G E D+WS GVI YILLSG PF +TK+ T + +F+ + + + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
+ AKD +RR+L KDPK+R+T L+HPW++
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 153/271 (56%), Gaps = 6/271 (2%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDMIRREIQ 75
E+V +Y G LG GQF V C E ST YA K I K K R + I RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN 135
I L PNV+ YE++T V +++EL GG+LFD + K +E +A L+ I+N
Sbjct: 67 I-LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
V HS+ + H DLKPEN + R+ +K+ DFG A + G +++I G+ ++A
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 195 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253
PE++ G E D+WS GVI YILLSG PF +TK+ T + +F+ + + + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
+ AKD +RR+L KDPK+R+T L+HPW++
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 153/271 (56%), Gaps = 6/271 (2%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDMIRREIQ 75
E+V +Y G LG GQF V C E ST YA K I K K R + I RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN 135
I L PNV+ YE++T V +++EL GG+LFD + K +E +A L+ I+N
Sbjct: 67 I-LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
V HS+ + H DLKPEN + R+ +K+ DFG A + G +++I G+ ++A
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 195 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253
PE++ G E D+WS GVI YILLSG PF +TK+ T + +F+ + + + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
+ AKD +RR+L KDPK+R+T L+HPW++
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 153/271 (56%), Gaps = 6/271 (2%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDMIRREIQ 75
E+V +Y G LG GQF V C E ST YA K I K K R + I RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN 135
I L PNV+ YE++T V +++EL GG+LFD + K +E +A L+ I+N
Sbjct: 67 I-LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
V HS+ + H DLKPEN + R+ +K+ DFG A + G +++I G+ ++A
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 195 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253
PE++ G E D+WS GVI YILLSG PF +TK+ T + +F+ + + + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
+ AKD +RR+L KDPK+R+T L+HPW++
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 153/271 (56%), Gaps = 6/271 (2%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDMIRREIQ 75
E+V +Y G LG GQF V C E ST YA K I K K R + I RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN 135
I L PNV+ YE++T V +++EL GG+LFD + K +E +A L+ I+N
Sbjct: 67 I-LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
V HS+ + H DLKPEN + R+ +K+ DFG A + G +++I G+ ++A
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 195 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253
PE++ G E D+WS GVI YILLSG PF +TK+ T + +F+ + + + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
+ AKD +RR+L KDPK+R+T L+HPW++
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 153/271 (56%), Gaps = 6/271 (2%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDMIRREIQ 75
E+V +Y G LG GQF V C E ST YA K I K K R + I RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN 135
I L PNV+ YE++T V +++EL GG+LFD + K +E +A L+ I+N
Sbjct: 67 I-LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
V HS+ + H DLKPEN + R+ +K+ DFG A + G +++I G+ ++A
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 195 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253
PE++ G E D+WS GVI YILLSG PF +TK+ T + +F+ + + + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
+ AKD +RR+L KDPK+R+T L+HPW++
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 153/271 (56%), Gaps = 6/271 (2%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDMIRREIQ 75
E+V +Y G LG GQF V C E ST YA K I K K R + I RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN 135
I L PNV+ YE++T V +++EL GG+LFD + K +E +A L+ I+N
Sbjct: 67 I-LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
V HS+ + H DLKPEN + R+ +K+ DFG A + G +++I G+ ++A
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 195 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253
PE++ G E D+WS GVI YILLSG PF +TK+ T + +F+ + + + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
+ AKD +RR+L KDPK+R+T L+HPW++
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 185 bits (469), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 153/271 (56%), Gaps = 6/271 (2%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDMIRREIQ 75
E+V +Y G LG GQF V C E ST YA K I K K R + I RE+
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN 135
I L PNV+ YE++T V +++EL GG+LFD + K +E +A L+ I+N
Sbjct: 66 I-LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 124
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
V HS+ + H DLKPEN + R+ +K+ DFG A + G +++I G+ ++A
Sbjct: 125 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 184
Query: 195 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253
PE++ G E D+WS GVI YILLSG PF +TK+ T + +F+ + + + S
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 244
Query: 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
+ AKD +RR+L KDPK+R+T L+HPW++
Sbjct: 245 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 153/271 (56%), Gaps = 6/271 (2%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDMIRREIQ 75
E+V +Y G LG GQF V C E ST YA K I K K R + I RE+
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN 135
I L PNV+ YE++T V +++EL GG+LFD + K +E +A L+ I+N
Sbjct: 66 I-LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 124
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
V HS+ + H DLKPEN + R+ +K+ DFG A + G +++I G+ ++A
Sbjct: 125 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 184
Query: 195 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253
PE++ G E D+WS GVI YILLSG PF +TK+ T + +F+ + + + S
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 244
Query: 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
+ AKD +RR+L KDPK+R+T L+HPW++
Sbjct: 245 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 153/271 (56%), Gaps = 6/271 (2%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDMIRREIQ 75
E+V +Y G LG GQF V C E ST YA K I K K R + I RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN 135
I L PNV+ YE++T V +++EL GG+LFD + K +E +A L+ I+N
Sbjct: 67 I-LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
V HS+ + H DLKPEN + R+ +K+ DFG A + G +++I G+ ++A
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 195 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253
PE++ G E D+WS GVI YILLSG PF +TK+ T + +F+ + + + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
+ AKD +RR+L KDPK+R+T L+HPW++
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/271 (38%), Positives = 153/271 (56%), Gaps = 6/271 (2%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDMIRREIQ 75
E+V +Y G LG G+F V C E ST YA K I K K R + I RE+
Sbjct: 7 ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN 135
I L PNV+ YE++T V +++EL GG+LFD + K +E +A L+ I+N
Sbjct: 67 I-LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
V HS+ + H DLKPEN + R+ +K+ DFG A + G +++I G+ ++A
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 195 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253
PE++ G E D+WS GVI YILLSG PF +TK+ T + +F+ + + + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
+ AKD +RR+L KDPK+R+T L+HPW++
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 152/271 (56%), Gaps = 6/271 (2%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDMIRREIQ 75
E+V +Y G LG GQF V C E ST YA K I K K R + I RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN 135
I L PNV+ YE++T V ++ EL GG+LFD + K +E +A L+ I+N
Sbjct: 67 I-LKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
V HS+ + H DLKPEN + R+ +K+ DFG A + G +++I G+ ++A
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 195 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253
PE++ G E D+WS GVI YILLSG PF +TK+ T + +F+ + + + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
+ AKD +RR+L KDPK+R+T L+HPW++
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/267 (35%), Positives = 153/267 (57%), Gaps = 17/267 (6%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM------IRREIQIRLYLSGQ 83
++GRG V C +T +A K I + RL+ + RRE I ++G
Sbjct: 101 VIGRGVSSVVRRCVHRATGHEFAVK-IMEVTAERLSPEQLEEVREATRRETHILRQVAGH 159
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
P+++ +YE + + +V +L G+LFD + K SE++ +++R+++ AV+ H+
Sbjct: 160 PHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN 219
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRR-- 201
++HRDLKPEN I DDN ++++DFG + E G+ R++ G+ Y+APE+L+
Sbjct: 220 NIVHRDLKPEN---ILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMD 276
Query: 202 -----YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256
YGKE+D+W+ GVIL+ LL+G PPFW + I++G+ F + W SST
Sbjct: 277 ETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTV 336
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWL 283
KDL+ R+L DP+ R+TA Q L+HP+
Sbjct: 337 KDLISRLLQVDPEARLTAEQALQHPFF 363
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 104/271 (38%), Positives = 152/271 (56%), Gaps = 6/271 (2%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDMIRREIQ 75
E+V +Y G LG G F V C E ST YA K I K K R + I RE+
Sbjct: 7 ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN 135
I L PNV+ YE++T V +++EL GG+LFD + K +E +A L+ I+N
Sbjct: 67 I-LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
V HS+ + H DLKPEN + R+ +K+ DFG A + G +++I G+ ++A
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 195 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253
PE++ G E D+WS GVI YILLSG PF +TK+ T + +F+ + + + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
+ AKD +RR+L KDPK+R+T L+HPW++
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/307 (34%), Positives = 168/307 (54%), Gaps = 13/307 (4%)
Query: 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACK--SIAKKPKMRLAENDMIRREIQ 75
+EDV Y ++G+G F V C T + +A K +AK + ++RE
Sbjct: 22 FEDV---YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS 78
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKG----YNSERDAATVLR 131
I ++ P++VE TY + +++V E +G DL I+ + SE A+ +R
Sbjct: 79 I-CHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 137
Query: 132 AIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL-LFEEGQVYRDIVGSG 190
I+ A+ CH ++HRD+KP S++++A +K+ FG A+ L E G V VG+
Sbjct: 138 QILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTP 197
Query: 191 FYIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPW 249
++APEV++R YGK +D+W GVIL+ILLSG PF+ TK+ ++ I++G+ + W
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQW 256
Query: 250 PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMNKLK 309
IS +AKDLVRRML DP RIT + L HPWL+E + + ++Q R+ N +
Sbjct: 257 SHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARR 316
Query: 310 KLTIKVI 316
KL V+
Sbjct: 317 KLKGAVL 323
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/307 (34%), Positives = 168/307 (54%), Gaps = 13/307 (4%)
Query: 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACK--SIAKKPKMRLAENDMIRREIQ 75
+EDV Y ++G+G F V C T + +A K +AK + ++RE
Sbjct: 24 FEDV---YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS 80
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKG----YNSERDAATVLR 131
I ++ P++VE TY + +++V E +G DL I+ + SE A+ +R
Sbjct: 81 I-CHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 139
Query: 132 AIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL-LFEEGQVYRDIVGSG 190
I+ A+ CH ++HRD+KP S++++A +K+ FG A+ L E G V VG+
Sbjct: 140 QILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTP 199
Query: 191 FYIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPW 249
++APEV++R YGK +D+W GVIL+ILLSG PF+ TK+ ++ I++G+ + W
Sbjct: 200 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQW 258
Query: 250 PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMNKLK 309
IS +AKDLVRRML DP RIT + L HPWL+E + + ++Q R+ N +
Sbjct: 259 SHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARR 318
Query: 310 KLTIKVI 316
KL V+
Sbjct: 319 KLKGAVL 325
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 172/314 (54%), Gaps = 8/314 (2%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ- 83
Y G LG GQF + C E ST YA K I KK + R + + R EI+ + + Q
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFI-KKRQSRASRRGVCREEIEREVSILRQV 72
Query: 84 --PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
PN++ YE+ T V +++EL GG+LFD + K SE +A + ++ I++ VN H
Sbjct: 73 LHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 142 SMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR 200
+ + H DLKPEN + ++ +K+ DFG A E+G +++I G+ ++APE++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 201 R-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259
G E D+WS GVI YILLSG PF +TK+ T I DFD + + S AKD
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDF 252
Query: 260 VRRMLTKDPKRRITAAQVLEHPWLR--ESGEASDDTSVILRMKQFRRMNKLKKLTIKVIV 317
+R++L K+ ++R+T + L HPW+ ++ +A ++ ++ F++ ++ + +
Sbjct: 253 IRKLLVKETRKRLTIQEALRHPWITPVDTQQAMVRRESVVNLENFKKQYVRRRWKLSFSI 312
Query: 318 EYLPDEETQALKEK 331
L + T++L +K
Sbjct: 313 VSLCNHLTRSLMKK 326
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 147/271 (54%), Gaps = 20/271 (7%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACK--------SIAKKPKMRLAENDMIRREIQIRLYLS 81
+LGRG V C T + YA K S + + L E + +E+ I +S
Sbjct: 11 ILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATL--KEVDILRKVS 68
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
G PN+++ K TYE T +V +L + G+LFD + K SE++ ++RA++ + H
Sbjct: 69 GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH 128
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL--- 198
+ ++HRDLKPEN I DD+ +K+TDFG + + G+ R++ G+ Y+APE++
Sbjct: 129 KLNIVHRDLKPEN---ILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECS 185
Query: 199 ----RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254
YGKE+D+WS GVI+Y LL+G PPFW + I+ G F + W S
Sbjct: 186 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSD 245
Query: 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
T KDLV R L P++R TA + L HP+ ++
Sbjct: 246 TVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 147/271 (54%), Gaps = 20/271 (7%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACK--------SIAKKPKMRLAENDMIRREIQIRLYLS 81
+LGRG V C T + YA K S + + L E + +E+ I +S
Sbjct: 24 ILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATL--KEVDILRKVS 81
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
G PN+++ K TYE T +V +L + G+LFD + K SE++ ++RA++ + H
Sbjct: 82 GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH 141
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL--- 198
+ ++HRDLKPEN I DD+ +K+TDFG + + G+ R++ G+ Y+APE++
Sbjct: 142 KLNIVHRDLKPEN---ILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECS 198
Query: 199 ----RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254
YGKE+D+WS GVI+Y LL+G PPFW + I+ G F + W S
Sbjct: 199 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSD 258
Query: 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
T KDLV R L P++R TA + L HP+ ++
Sbjct: 259 TVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 146/271 (53%), Gaps = 20/271 (7%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACK--------SIAKKPKMRLAENDMIRREIQIRLYLS 81
+LGRG V C T + YA K S + + L E + +E+ I +S
Sbjct: 24 ILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATL--KEVDILRKVS 81
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
G PN+++ K TYE T +V +L + G+LFD + K SE++ ++RA++ + H
Sbjct: 82 GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH 141
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL--- 198
+ ++HRDLKPEN I DD+ +K+TDFG + + G+ R + G+ Y+APE++
Sbjct: 142 KLNIVHRDLKPEN---ILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECS 198
Query: 199 ----RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254
YGKE+D+WS GVI+Y LL+G PPFW + I+ G F + W S
Sbjct: 199 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSD 258
Query: 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
T KDLV R L P++R TA + L HP+ ++
Sbjct: 259 TVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 170/315 (53%), Gaps = 13/315 (4%)
Query: 11 DPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMI 70
+P + ED Y G LG GQF + C E ST YA K I KK + R + +
Sbjct: 3 EPFKQQKVEDF---YDIGEELGSGQFAIVKKCREKSTGLEYAAKFI-KKRQSRASRRGVS 58
Query: 71 RREIQIRLYLSGQ---PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAA 127
R EI+ + + Q NV+ YE+ T V +++EL GG+LFD + K SE +A
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 128 TVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEGQVYRDI 186
+ ++ I++ VN H+ + H DLKPEN + ++ +K+ DFG A E+G +++I
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 187 VGSGFYIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD 245
G+ ++APE++ G E D+WS GVI YILLSG PF +TK+ T I DFD
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD 238
Query: 246 TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR--ESGEASDDTSVILRMKQFR 303
+ + S AKD +R++L K+ ++R+T + L HPW+ ++ +A ++ ++ FR
Sbjct: 239 EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFR 298
Query: 304 R--MNKLKKLTIKVI 316
+ + + KL ++
Sbjct: 299 KQYVRRRSKLAFSIV 313
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 170/315 (53%), Gaps = 13/315 (4%)
Query: 11 DPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMI 70
+P + ED Y G LG GQF + C E ST YA K I KK + R + +
Sbjct: 3 EPFKQQKVEDF---YDIGEELGSGQFAIVKKCREKSTGLEYAAKFI-KKRQSRASRRGVS 58
Query: 71 RREIQIRLYLSGQ---PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAA 127
R EI+ + + Q NV+ YE+ T V +++EL GG+LFD + K SE +A
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 128 TVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEGQVYRDI 186
+ ++ I++ VN H+ + H DLKPEN + ++ +K+ DFG A E+G +++I
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 187 VGSGFYIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD 245
G+ ++APE++ G E D+WS GVI YILLSG PF +TK+ T I DFD
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD 238
Query: 246 TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR--ESGEASDDTSVILRMKQFR 303
+ + S AKD +R++L K+ ++R+T + L HPW+ ++ +A ++ ++ FR
Sbjct: 239 EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFR 298
Query: 304 R--MNKLKKLTIKVI 316
+ + + KL ++
Sbjct: 299 KQYVRRRSKLAFSIV 313
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 148/264 (56%), Gaps = 6/264 (2%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ- 83
Y G LG GQF + C E ST YA K I KK + R + + R EI+ + + Q
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFI-KKRQSRASRRGVSREEIEREVSILRQV 72
Query: 84 --PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
NV+ YE+ T V +++EL GG+LFD + K SE +A + ++ I++ VN H
Sbjct: 73 LHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 142 SMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR 200
+ + H DLKPEN + ++ +K+ DFG A E+G +++I G+ ++APE++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 201 R-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259
G E D+WS GVI YILLSG PF +TK+ T I DFD + + S AKD
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDF 252
Query: 260 VRRMLTKDPKRRITAAQVLEHPWL 283
+R++L K+ ++R+T + L HPW+
Sbjct: 253 IRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 164/301 (54%), Gaps = 11/301 (3%)
Query: 11 DPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMI 70
+P + ED Y G LG GQF + C E ST YA K I KK + R + +
Sbjct: 3 EPFKQQKVEDF---YDIGEELGSGQFAIVKKCREKSTGLEYAAKFI-KKRQSRASRRGVS 58
Query: 71 RREIQIRLYLSGQ---PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAA 127
R EI+ + + Q NV+ YE+ T V +++EL GG+LFD + K SE +A
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 128 TVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEGQVYRDI 186
+ ++ I++ VN H+ + H DLKPEN + ++ +K+ DFG A E+G +++I
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 187 VGSGFYIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD 245
G+ ++APE++ G E D+WS GVI YILLSG PF +TK+ T I DFD
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD 238
Query: 246 TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR--ESGEASDDTSVILRMKQFR 303
+ + S AKD +R++L K+ ++R+T + L HPW+ ++ +A ++ ++ FR
Sbjct: 239 EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFR 298
Query: 304 R 304
+
Sbjct: 299 K 299
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 164/301 (54%), Gaps = 11/301 (3%)
Query: 11 DPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMI 70
+P + ED Y G LG GQF + C E ST YA K I KK + R + +
Sbjct: 3 EPFKQQKVEDF---YDIGEELGSGQFAIVKKCREKSTGLEYAAKFI-KKRQSRASRRGVS 58
Query: 71 RREIQIRLYLSGQ---PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAA 127
R EI+ + + Q NV+ YE+ T V +++EL GG+LFD + K SE +A
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 128 TVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEGQVYRDI 186
+ ++ I++ VN H+ + H DLKPEN + ++ +K+ DFG A E+G +++I
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 187 VGSGFYIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD 245
G+ ++APE++ G E D+WS GVI YILLSG PF +TK+ T I DFD
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD 238
Query: 246 TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR--ESGEASDDTSVILRMKQFR 303
+ + S AKD +R++L K+ ++R+T + L HPW+ ++ +A ++ ++ FR
Sbjct: 239 EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFR 298
Query: 304 R 304
+
Sbjct: 299 K 299
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 144/268 (53%), Gaps = 15/268 (5%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
Y +G G + C +TN YA K I K + EI+I L P
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDP-------SEEIEILLRYGQHP 81
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
N++ K Y+D V++V EL GG+L D+I+ + + SER+A+ VL I V HS G
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG 141
Query: 145 VMHRDLKPENFSFISRDDNA-LLKVTDFGSA--LLFEEGQVYRDIVGSGFYIAPEVLRRR 201
V+HRDLKP N ++ N L++ DFG A L E G + + F +APEVL+R+
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANF-VAPEVLKRQ 200
Query: 202 -YGKEIDIWSAGVILYILLSGVPPFW---AETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
Y + DIWS G++LY +L+G PF ++T + I G+ W ++S TAK
Sbjct: 201 GYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAK 260
Query: 258 DLVRRMLTKDPKRRITAAQVLEHPWLRE 285
DLV +ML DP +R+TA QVL+HPW+ +
Sbjct: 261 DLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 152/271 (56%), Gaps = 15/271 (5%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LG G F + C +N+ +A K I+K R+ N ++EI G PN+V+
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISK----RMEAN--TQKEITALKLCEGHPNIVKLH 72
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
+ D+ +VMEL GG+LF+RI K + SE +A+ ++R +V+AV+ H +GV+HRDL
Sbjct: 73 EVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDL 132
Query: 151 KPENFSFISRDDNALLKVTDFGSALLF-EEGQVYRDIVGSGFYIAPEVLRRR-YGKEIDI 208
KPEN F +DN +K+ DFG A L + Q + + Y APE+L + Y + D+
Sbjct: 133 KPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDL 192
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDA-------ILQGEIDFDTDPWPSISSTAKDLVR 261
WS GVILY +LSG PF + + T + I +G+ F+ + W ++S AKDL++
Sbjct: 193 WSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQ 252
Query: 262 RMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
+LT DP +R+ + + + WL++ + S +
Sbjct: 253 GLLTVDPNKRLKMSGLRYNEWLQDGSQLSSN 283
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/268 (37%), Positives = 146/268 (54%), Gaps = 15/268 (5%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
Y +G G + C +TN YA K I K ++ D EI+I L P
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDK------SKRDP-SEEIEILLRYGQHP 81
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
N++ K Y+D V++V EL GG+L D+I+ + + SER+A+ VL I V HS G
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG 141
Query: 145 VMHRDLKPENFSFISRDDNA-LLKVTDFGSA--LLFEEGQVYRDIVGSGFYIAPEVLRRR 201
V+HRDLKP N ++ N L++ DFG A L E G + + F +APEVL+R+
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANF-VAPEVLKRQ 200
Query: 202 -YGKEIDIWSAGVILYILLSGVPPFW---AETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
Y + DIWS G++LY +L+G PF ++T + I G+ W ++S TAK
Sbjct: 201 GYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAK 260
Query: 258 DLVRRMLTKDPKRRITAAQVLEHPWLRE 285
DLV +ML DP +R+TA QVL+HPW+ +
Sbjct: 261 DLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 97/266 (36%), Positives = 151/266 (56%), Gaps = 8/266 (3%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
+ F R LG G FG +L E S+ K+I K E I EI++ L P
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQ--IEAEIEVLKSLD-HP 80
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRII---AKGYN-SERDAATVLRAIVNAVNVC 140
N+++ +ED +++VME CEGG+L +RI+ A+G SE A +++ ++NA+
Sbjct: 81 NIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR 200
HS V+H+DLKPEN F ++ +K+ DFG A LF+ + + G+ Y+APEV +R
Sbjct: 141 HSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKR 200
Query: 201 RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260
+ DIWSAGV++Y LL+G PF + + E ++ + P ++ A DL+
Sbjct: 201 DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP-LTPQAVDLL 259
Query: 261 RRMLTKDPKRRITAAQVLEHPWLRES 286
++MLTKDP+RR +AAQVL H W +++
Sbjct: 260 KQMLTKDPERRPSAAQVLHHEWFKQA 285
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/261 (39%), Positives = 142/261 (54%), Gaps = 17/261 (6%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G + V C +TN +A K I K K E EI+I L PN++ K
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVK-IIDKSKRDPTE------EIEILLRYGQHPNIITLK 82
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
Y+D V+VV EL +GG+L D+I+ + + SER+A+ VL I V H+ GV+HRDL
Sbjct: 83 DVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDL 142
Query: 151 KPENFSFISRDDNA-LLKVTDFGSA--LLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKEI 206
KP N ++ N +++ DFG A L E G + + F +APEVL R+ Y
Sbjct: 143 KPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANF-VAPEVLERQGYDAAC 201
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAIL----QGEIDFDTDPWPSISSTAKDLVRR 262
DIWS GV+LY +L+G PF A T + IL G+ W S+S TAKDLV +
Sbjct: 202 DIWSLGVLLYTMLTGYTPF-ANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSK 260
Query: 263 MLTKDPKRRITAAQVLEHPWL 283
ML DP +R+TAA VL HPW+
Sbjct: 261 MLHVDPHQRLTAALVLRHPWI 281
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 148/271 (54%), Gaps = 12/271 (4%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKP----KMRLAENDM-IRREIQIRLY 79
Y + LG G G L E T + A K I+K+ R A+ + + EI+I
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 80 LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNV 139
L+ P +++ K+ ++ E ++V+EL EGG+LFD+++ E ++ AV
Sbjct: 72 LN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL- 198
H G++HRDLKPEN S++++ L+K+TDFG + + E + R + G+ Y+APEVL
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 189
Query: 199 ---RRRYGKEIDIWSAGVILYILLSGVPPFWAE-TKKGTYDAILQGEIDFDTDPWPSISS 254
Y + +D WS GVIL+I LSG PPF T+ D I G+ +F + W +S
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 249
Query: 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
A DLV+++L DPK R T + L HPWL++
Sbjct: 250 KALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 148/271 (54%), Gaps = 12/271 (4%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKP----KMRLAENDM-IRREIQIRLY 79
Y + LG G G L E T + A K I+K+ R A+ + + EI+I
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 80 LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNV 139
L+ P +++ K+ ++ E ++V+EL EGG+LFD+++ E ++ AV
Sbjct: 72 LN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL- 198
H G++HRDLKPEN S++++ L+K+TDFG + + E + R + G+ Y+APEVL
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 189
Query: 199 ---RRRYGKEIDIWSAGVILYILLSGVPPFWAE-TKKGTYDAILQGEIDFDTDPWPSISS 254
Y + +D WS GVIL+I LSG PPF T+ D I G+ +F + W +S
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 249
Query: 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
A DLV+++L DPK R T + L HPWL++
Sbjct: 250 KALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 148/271 (54%), Gaps = 12/271 (4%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKP----KMRLAENDM-IRREIQIRLY 79
Y + LG G G L E T + A K I+K+ R A+ + + EI+I
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 80 LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNV 139
L+ P +++ K+ ++ E ++V+EL EGG+LFD+++ E ++ AV
Sbjct: 72 LN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL- 198
H G++HRDLKPEN S++++ L+K+TDFG + + E + R + G+ Y+APEVL
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 189
Query: 199 ---RRRYGKEIDIWSAGVILYILLSGVPPFWAE-TKKGTYDAILQGEIDFDTDPWPSISS 254
Y + +D WS GVIL+I LSG PPF T+ D I G+ +F + W +S
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 249
Query: 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
A DLV+++L DPK R T + L HPWL++
Sbjct: 250 KALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 148/271 (54%), Gaps = 12/271 (4%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKP----KMRLAENDM-IRREIQIRLY 79
Y + LG G G L E T + A K I+K+ R A+ + + EI+I
Sbjct: 11 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 70
Query: 80 LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNV 139
L+ P +++ K+ ++ E ++V+EL EGG+LFD+++ E ++ AV
Sbjct: 71 LN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 128
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL- 198
H G++HRDLKPEN S++++ L+K+TDFG + + E + R + G+ Y+APEVL
Sbjct: 129 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 188
Query: 199 ---RRRYGKEIDIWSAGVILYILLSGVPPFWAE-TKKGTYDAILQGEIDFDTDPWPSISS 254
Y + +D WS GVIL+I LSG PPF T+ D I G+ +F + W +S
Sbjct: 189 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 248
Query: 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
A DLV+++L DPK R T + L HPWL++
Sbjct: 249 KALDLVKKLLVVDPKARFTTEEALRHPWLQD 279
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 148/271 (54%), Gaps = 12/271 (4%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKP----KMRLAENDM-IRREIQIRLY 79
Y + LG G G L E T + A K I+K+ R A+ + + EI+I
Sbjct: 18 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 77
Query: 80 LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNV 139
L+ P +++ K+ ++ E ++V+EL EGG+LFD+++ E ++ AV
Sbjct: 78 LN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 135
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL- 198
H G++HRDLKPEN S++++ L+K+TDFG + + E + R + G+ Y+APEVL
Sbjct: 136 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 195
Query: 199 ---RRRYGKEIDIWSAGVILYILLSGVPPFWAE-TKKGTYDAILQGEIDFDTDPWPSISS 254
Y + +D WS GVIL+I LSG PPF T+ D I G+ +F + W +S
Sbjct: 196 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 255
Query: 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
A DLV+++L DPK R T + L HPWL++
Sbjct: 256 KALDLVKKLLVVDPKARFTTEEALRHPWLQD 286
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 144/269 (53%), Gaps = 20/269 (7%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
++LG G G C T + A K + PK R +E+ SG P++V
Sbjct: 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKAR--------QEVDHHWQASGGPHIVC 86
Query: 89 FKSTYED----ETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVCHS 142
YE+ + + ++ME EGG+LF RI +G +ER+AA ++R I A+ HS
Sbjct: 87 ILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS 146
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL-RRR 201
+ HRD+KPEN + S++ +A+LK+TDFG A + + + + +Y+APEVL +
Sbjct: 147 HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL-QTPCYTPYYVAPEVLGPEK 205
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKK----GTYDAILQGEIDFDTDPWPSISSTAK 257
Y K D+WS GVI+YILL G PPF++ T + G I G+ F W +S AK
Sbjct: 206 YDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAK 265
Query: 258 DLVRRMLTKDPKRRITAAQVLEHPWLRES 286
L+R +L DP R+T Q + HPW+ +S
Sbjct: 266 QLIRLLLKTDPTERLTITQFMNHPWINQS 294
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 144/269 (53%), Gaps = 20/269 (7%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
++LG G G C T + A K + PK R +E+ SG P++V
Sbjct: 16 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKAR--------QEVDHHWQASGGPHIVC 67
Query: 89 FKSTYED----ETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVCHS 142
YE+ + + ++ME EGG+LF RI +G +ER+AA ++R I A+ HS
Sbjct: 68 ILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS 127
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL-RRR 201
+ HRD+KPEN + S++ +A+LK+TDFG A + + + + +Y+APEVL +
Sbjct: 128 HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL-QTPCYTPYYVAPEVLGPEK 186
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKK----GTYDAILQGEIDFDTDPWPSISSTAK 257
Y K D+WS GVI+YILL G PPF++ T + G I G+ F W +S AK
Sbjct: 187 YDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAK 246
Query: 258 DLVRRMLTKDPKRRITAAQVLEHPWLRES 286
L+R +L DP R+T Q + HPW+ +S
Sbjct: 247 QLIRLLLKTDPTERLTITQFMNHPWINQS 275
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 140/261 (53%), Gaps = 17/261 (6%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G + V C +TN +A K I K K E EI+I L PN++ K
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVK-IIDKSKRDPTE------EIEILLRYGQHPNIITLK 82
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
Y+D V+VV EL +GG+L D+I+ + + SER+A+ VL I V H+ GV+HRDL
Sbjct: 83 DVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDL 142
Query: 151 KPENFSFISRDDNA-LLKVTDFGSA--LLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKEI 206
KP N ++ N +++ DFG A L E G + + F +APEVL R+ Y
Sbjct: 143 KPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANF-VAPEVLERQGYDAAC 201
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAIL----QGEIDFDTDPWPSISSTAKDLVRR 262
DIWS GV+LY L+G PF A T + IL G+ W S+S TAKDLV +
Sbjct: 202 DIWSLGVLLYTXLTGYTPF-ANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSK 260
Query: 263 MLTKDPKRRITAAQVLEHPWL 283
L DP +R+TAA VL HPW+
Sbjct: 261 XLHVDPHQRLTAALVLRHPWI 281
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 148/271 (54%), Gaps = 12/271 (4%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKP----KMRLAENDM-IRREIQIRLY 79
Y + LG G G L E T + A + I+K+ R A+ + + EI+I
Sbjct: 151 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 210
Query: 80 LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNV 139
L+ P +++ K+ ++ E ++V+EL EGG+LFD+++ E ++ AV
Sbjct: 211 LN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 268
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL- 198
H G++HRDLKPEN S++++ L+K+TDFG + + E + R + G+ Y+APEVL
Sbjct: 269 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 328
Query: 199 ---RRRYGKEIDIWSAGVILYILLSGVPPFWAE-TKKGTYDAILQGEIDFDTDPWPSISS 254
Y + +D WS GVIL+I LSG PPF T+ D I G+ +F + W +S
Sbjct: 329 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 388
Query: 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
A DLV+++L DPK R T + L HPWL++
Sbjct: 389 KALDLVKKLLVVDPKARFTTEEALRHPWLQD 419
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 148/271 (54%), Gaps = 12/271 (4%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKP----KMRLAENDM-IRREIQIRLY 79
Y + LG G G L E T + A + I+K+ R A+ + + EI+I
Sbjct: 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 196
Query: 80 LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNV 139
L+ P +++ K+ ++ E ++V+EL EGG+LFD+++ E ++ AV
Sbjct: 197 LN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 254
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL- 198
H G++HRDLKPEN S++++ L+K+TDFG + + E + R + G+ Y+APEVL
Sbjct: 255 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 314
Query: 199 ---RRRYGKEIDIWSAGVILYILLSGVPPFWAE-TKKGTYDAILQGEIDFDTDPWPSISS 254
Y + +D WS GVIL+I LSG PPF T+ D I G+ +F + W +S
Sbjct: 315 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 374
Query: 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
A DLV+++L DPK R T + L HPWL++
Sbjct: 375 KALDLVKKLLVVDPKARFTTEEALRHPWLQD 405
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 160/295 (54%), Gaps = 9/295 (3%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
Y LGRG+FG+ + C E S+ + Y +AK K++ + ++++EI I L ++
Sbjct: 7 YMIAEDLGRGEFGIVHRCVETSSKKTY----MAKFVKVKGTDQVLVKKEISI-LNIARHR 61
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSM 143
N++ ++E + ++ E G D+F+RI + +ER+ + + + A+ HS
Sbjct: 62 NILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH 121
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RY 202
+ H D++PEN + +R + + K+ +FG A + G +R + + Y APEV +
Sbjct: 122 NIGHFDIRPENIIYQTRRSSTI-KIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVV 180
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
D+WS G ++Y+LLSG+ PF AET + + I+ E FD + + IS A D V R
Sbjct: 181 STATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDR 240
Query: 263 MLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMNKLKKLTIKVIV 317
+L K+ K R+TA++ L+HPWL++ E T VI +K R + L K + ++V
Sbjct: 241 LLVKERKSRMTASEALQHPWLKQKIERV-STKVIRTLKHRRYYHTLIKKDLNMVV 294
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 142/270 (52%), Gaps = 19/270 (7%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
++LG G G T +A K + PK R RE+++ S P++V
Sbjct: 21 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKAR--------REVELHWRASQCPHIV 72
Query: 88 EFKSTYEDETA----VHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVCH 141
YE+ A + +VME +GG+LF RI +G +ER+A+ ++++I A+ H
Sbjct: 73 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 132
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL-RR 200
S+ + HRD+KPEN + S+ NA+LK+TDFG A + + +Y+APEVL
Sbjct: 133 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPE 192
Query: 201 RYGKEIDIWSAGVILYILLSGVPPFWAE----TKKGTYDAILQGEIDFDTDPWPSISSTA 256
+Y K D+WS GVI+YILL G PPF++ G I G+ +F W +S
Sbjct: 193 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEV 252
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRES 286
K L+R +L +P +R+T + + HPW+ +S
Sbjct: 253 KMLIRNLLKTEPTQRMTITEFMNHPWIMQS 282
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 141/270 (52%), Gaps = 19/270 (7%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
++LG G G T +A K + PK R RE+++ S P++V
Sbjct: 73 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKAR--------REVELHWRASQCPHIV 124
Query: 88 EFKSTYEDETA----VHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVCH 141
YE+ A + +VME +GG+LF RI +G +ER+A+ ++++I A+ H
Sbjct: 125 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 184
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL-RR 200
S+ + HRD+KPEN + S+ NA+LK+TDFG A + +Y+APEVL
Sbjct: 185 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 244
Query: 201 RYGKEIDIWSAGVILYILLSGVPPFWAE----TKKGTYDAILQGEIDFDTDPWPSISSTA 256
+Y K D+WS GVI+YILL G PPF++ G I G+ +F W +S
Sbjct: 245 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEV 304
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRES 286
K L+R +L +P +R+T + + HPW+ +S
Sbjct: 305 KMLIRNLLKTEPTQRMTITEFMNHPWIMQS 334
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 141/270 (52%), Gaps = 19/270 (7%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
++LG G G T +A K + PK R RE+++ S P++V
Sbjct: 67 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKAR--------REVELHWRASQCPHIV 118
Query: 88 EFKSTYEDETA----VHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVCH 141
YE+ A + +VME +GG+LF RI +G +ER+A+ ++++I A+ H
Sbjct: 119 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 178
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL-RR 200
S+ + HRD+KPEN + S+ NA+LK+TDFG A + +Y+APEVL
Sbjct: 179 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 238
Query: 201 RYGKEIDIWSAGVILYILLSGVPPFWAE----TKKGTYDAILQGEIDFDTDPWPSISSTA 256
+Y K D+WS GVI+YILL G PPF++ G I G+ +F W +S
Sbjct: 239 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEV 298
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRES 286
K L+R +L +P +R+T + + HPW+ +S
Sbjct: 299 KMLIRNLLKTEPTQRMTITEFMNHPWIMQS 328
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 141/270 (52%), Gaps = 19/270 (7%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
++LG G G T +A K + PK R RE+++ S P++V
Sbjct: 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKAR--------REVELHWRASQCPHIV 74
Query: 88 EFKSTYEDETA----VHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVCH 141
YE+ A + +VME +GG+LF RI +G +ER+A+ ++++I A+ H
Sbjct: 75 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL-RR 200
S+ + HRD+KPEN + S+ NA+LK+TDFG A + +Y+APEVL
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 194
Query: 201 RYGKEIDIWSAGVILYILLSGVPPFWAE----TKKGTYDAILQGEIDFDTDPWPSISSTA 256
+Y K D+WS GVI+YILL G PPF++ G I G+ +F W +S
Sbjct: 195 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEV 254
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRES 286
K L+R +L +P +R+T + + HPW+ +S
Sbjct: 255 KMLIRNLLKTEPTQRMTITEFMNHPWIMQS 284
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 147/285 (51%), Gaps = 22/285 (7%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
++LG G G T +A K + PK R RE+++ S P++V
Sbjct: 28 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKAR--------REVELHWRASQCPHIV 79
Query: 88 EFKSTYEDETA----VHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVCH 141
YE+ A + +VME +GG+LF RI +G +ER+A+ ++++I A+ H
Sbjct: 80 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 139
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL-RR 200
S+ + HRD+KPEN + S+ NA+LK+TDFG A + +Y+APEVL
Sbjct: 140 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 199
Query: 201 RYGKEIDIWSAGVILYILLSGVPPFWAE----TKKGTYDAILQGEIDFDTDPWPSISSTA 256
+Y K D+WS GVI+YILL G PPF++ G I G+ +F W +S
Sbjct: 200 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEV 259
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILR 298
K L+R +L +P +R+T + + HPW+ +S + TS +L+
Sbjct: 260 KMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 304
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 147/285 (51%), Gaps = 22/285 (7%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
++LG G G T +A K + PK R RE+++ S P++V
Sbjct: 27 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKAR--------REVELHWRASQCPHIV 78
Query: 88 EFKSTYEDETA----VHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVCH 141
YE+ A + +VME +GG+LF RI +G +ER+A+ ++++I A+ H
Sbjct: 79 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 138
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL-RR 200
S+ + HRD+KPEN + S+ NA+LK+TDFG A + +Y+APEVL
Sbjct: 139 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 198
Query: 201 RYGKEIDIWSAGVILYILLSGVPPFWAE----TKKGTYDAILQGEIDFDTDPWPSISSTA 256
+Y K D+WS GVI+YILL G PPF++ G I G+ +F W +S
Sbjct: 199 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEV 258
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILR 298
K L+R +L +P +R+T + + HPW+ +S + TS +L+
Sbjct: 259 KMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 303
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 141/270 (52%), Gaps = 19/270 (7%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
++LG G G T +A K + PK R RE+++ S P++V
Sbjct: 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKAR--------REVELHWRASQCPHIV 74
Query: 88 EFKSTYEDETA----VHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVCH 141
YE+ A + +VME +GG+LF RI +G +ER+A+ ++++I A+ H
Sbjct: 75 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL-RR 200
S+ + HRD+KPEN + S+ NA+LK+TDFG A + +Y+APEVL
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 194
Query: 201 RYGKEIDIWSAGVILYILLSGVPPFWAE----TKKGTYDAILQGEIDFDTDPWPSISSTA 256
+Y K D+WS GVI+YILL G PPF++ G I G+ +F W +S
Sbjct: 195 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEV 254
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRES 286
K L+R +L +P +R+T + + HPW+ +S
Sbjct: 255 KMLIRNLLKTEPTQRMTITEFMNHPWIMQS 284
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 141/270 (52%), Gaps = 19/270 (7%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
++LG G G T +A K + PK R RE+++ S P++V
Sbjct: 22 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKAR--------REVELHWRASQCPHIV 73
Query: 88 EFKSTYEDETA----VHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVCH 141
YE+ A + +VME +GG+LF RI +G +ER+A+ ++++I A+ H
Sbjct: 74 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 133
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL-RR 200
S+ + HRD+KPEN + S+ NA+LK+TDFG A + +Y+APEVL
Sbjct: 134 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 193
Query: 201 RYGKEIDIWSAGVILYILLSGVPPFWAE----TKKGTYDAILQGEIDFDTDPWPSISSTA 256
+Y K D+WS GVI+YILL G PPF++ G I G+ +F W +S
Sbjct: 194 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEV 253
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRES 286
K L+R +L +P +R+T + + HPW+ +S
Sbjct: 254 KMLIRNLLKTEPTQRMTITEFMNHPWIMQS 283
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 141/270 (52%), Gaps = 19/270 (7%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
++LG G G T +A K + PK R RE+++ S P++V
Sbjct: 29 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKAR--------REVELHWRASQCPHIV 80
Query: 88 EFKSTYEDETA----VHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVCH 141
YE+ A + +VME +GG+LF RI +G +ER+A+ ++++I A+ H
Sbjct: 81 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 140
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL-RR 200
S+ + HRD+KPEN + S+ NA+LK+TDFG A + +Y+APEVL
Sbjct: 141 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 200
Query: 201 RYGKEIDIWSAGVILYILLSGVPPFWAE----TKKGTYDAILQGEIDFDTDPWPSISSTA 256
+Y K D+WS GVI+YILL G PPF++ G I G+ +F W +S
Sbjct: 201 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEV 260
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRES 286
K L+R +L +P +R+T + + HPW+ +S
Sbjct: 261 KMLIRNLLKTEPTQRMTITEFMNHPWIMQS 290
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 141/270 (52%), Gaps = 19/270 (7%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
++LG G G T +A K + PK R RE+++ S P++V
Sbjct: 21 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKAR--------REVELHWRASQCPHIV 72
Query: 88 EFKSTYEDETA----VHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVCH 141
YE+ A + +VME +GG+LF RI +G +ER+A+ ++++I A+ H
Sbjct: 73 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 132
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL-RR 200
S+ + HRD+KPEN + S+ NA+LK+TDFG A + +Y+APEVL
Sbjct: 133 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 192
Query: 201 RYGKEIDIWSAGVILYILLSGVPPFWAE----TKKGTYDAILQGEIDFDTDPWPSISSTA 256
+Y K D+WS GVI+YILL G PPF++ G I G+ +F W +S
Sbjct: 193 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEV 252
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRES 286
K L+R +L +P +R+T + + HPW+ +S
Sbjct: 253 KMLIRNLLKTEPTQRMTITEFMNHPWIMQS 282
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 141/269 (52%), Gaps = 19/269 (7%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
++LG G G T +A K + PK R RE+++ S P++V
Sbjct: 38 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKAR--------REVELHWRASQCPHIVR 89
Query: 89 FKSTYEDETA----VHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVCHS 142
YE+ A + +VME +GG+LF RI +G +ER+A+ ++++I A+ HS
Sbjct: 90 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 149
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL-RRR 201
+ + HRD+KPEN + S+ NA+LK+TDFG A + +Y+APEVL +
Sbjct: 150 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK 209
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAE----TKKGTYDAILQGEIDFDTDPWPSISSTAK 257
Y K D+WS GVI+YILL G PPF++ G I G+ +F W +S K
Sbjct: 210 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 269
Query: 258 DLVRRMLTKDPKRRITAAQVLEHPWLRES 286
L+R +L +P +R+T + + HPW+ +S
Sbjct: 270 MLIRNLLKTEPTQRMTITEFMNHPWIMQS 298
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 135/270 (50%), Gaps = 19/270 (7%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
++LG G G T +A K + PK R RE+++ S P++V
Sbjct: 67 SQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKAR--------REVELHWRASQCPHIV 118
Query: 88 EFKSTYEDETA----VHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVCH 141
YE+ A + +V E +GG+LF RI +G +ER+A+ + ++I A+ H
Sbjct: 119 RIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLH 178
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL-RR 200
S+ + HRD+KPEN + S+ NA+LK+TDFG A + +Y+APEVL
Sbjct: 179 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 238
Query: 201 RYGKEIDIWSAGVILYILLSGVPPFWAE----TKKGTYDAILQGEIDFDTDPWPSISSTA 256
+Y K D WS GVI YILL G PPF++ G I G+ +F W +S
Sbjct: 239 KYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEEV 298
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRES 286
K L+R +L +P +R T + HPW+ +S
Sbjct: 299 KXLIRNLLKTEPTQRXTITEFXNHPWIXQS 328
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 152/303 (50%), Gaps = 35/303 (11%)
Query: 11 DPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMI 70
D + GK +ED ++ +LG G + + YA K I K+ +
Sbjct: 4 DSLPGK-FED--MYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGH---SRSRV 57
Query: 71 RREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVL 130
RE++ G N++E +ED+T ++V E +GG + I + + +ER+A+ V+
Sbjct: 58 FREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVV 117
Query: 131 RAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDF--GSALLFEEGQV------ 182
R + A++ H+ G+ HRDLKPEN S + + +K+ DF GS +
Sbjct: 118 RDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPE 177
Query: 183 YRDIVGSGFYIAPEVLR------RRYGKEIDIWSAGVILYILLSGVPPF---------WA 227
GS Y+APEV+ Y K D+WS GV+LYI+LSG PPF W
Sbjct: 178 LTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWD 237
Query: 228 E------TKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281
+ +++I +G+ +F W ISS AKDL+ ++L +D K+R++AAQVL+HP
Sbjct: 238 RGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHP 297
Query: 282 WLR 284
W++
Sbjct: 298 WVQ 300
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 149/282 (52%), Gaps = 13/282 (4%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LG G FGV + C E +T R + K I + + ++ EI I L P ++
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPL---DKYTVKNEISIMNQLH-HPKLINLH 114
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSMGVMHRD 149
+ED+ + +++E GG+LFDRI A+ Y SE + +R + H ++H D
Sbjct: 115 DAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLD 174
Query: 150 LKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL-RRRYGKEIDI 208
+KPEN ++ +++ K+ DFG A ++ + + + APE++ R G D+
Sbjct: 175 IKPENIMCETKKASSV-KIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDM 233
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDP 268
W+ GV+ Y+LLSG+ PF E T + + + +FD D + S+S AKD ++ +L K+P
Sbjct: 234 WAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEP 293
Query: 269 KRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMNKLKK 310
++R+T LEHPWL+ G+ S+ TS I R NK+++
Sbjct: 294 RKRLTVHDALEHPWLK--GDHSNLTSRIPS----SRYNKIRQ 329
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 143/259 (55%), Gaps = 12/259 (4%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 17 GRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR-HPNIL 75
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 76 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIH 135
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD-IVGSGFYIAPEVLR-RRYGKE 205
RD+KPEN S N LK+ DFG ++ + RD + G+ Y+ PE++ R + ++
Sbjct: 136 RDIKPENLLLGS---NGELKIADFGWSVHAPSSR--RDTLCGTLDYLPPEMIEGRMHDEK 190
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265
+D+WS GV+ Y L G+PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 191 VDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPD----FVTEGARDLISRLLK 246
Query: 266 KDPKRRITAAQVLEHPWLR 284
+ +R+T A+VLEHPW++
Sbjct: 247 HNASQRLTLAEVLEHPWIK 265
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 142/258 (55%), Gaps = 7/258 (2%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89
+LG G+FG + C E +T A K I + + + + ++ EI + L N+++
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRG---MKDKEEVKNEISVMNQLD-HANLIQL 151
Query: 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSMGVMHR 148
+E + + +VME +GG+LFDRII + YN +E D ++ I + H M ++H
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHL 211
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRRY-GKEID 207
DLKPEN ++RD + K+ DFG A ++ + + G+ ++APEV+ + D
Sbjct: 212 DLKPENILCVNRDAKQI-KIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTD 270
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
+WS GVI Y+LLSG+ PF + T + IL D + + + IS AK+ + ++L K+
Sbjct: 271 MWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKE 330
Query: 268 PKRRITAAQVLEHPWLRE 285
RI+A++ L+HPWL +
Sbjct: 331 KSWRISASEALKHPWLSD 348
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 140/281 (49%), Gaps = 9/281 (3%)
Query: 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR 77
++ V+ HY LG G FGV + TE +T +A K + + ++ + +R+EIQ
Sbjct: 46 HDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE---SDKETVRKEIQTM 102
Query: 78 LYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVN 135
L P +V +ED+ + ++ E GG+LF+++ A +N SE +A +R +
Sbjct: 103 SVLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQVCK 160
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAP 195
+ H +H DLKPEN F ++ N L K+ DFG + Q + G+ + AP
Sbjct: 161 GLCHMHENNYVHLDLKPENIMFTTKRSNEL-KLIDFGLTAHLDPKQSVKVTTGTAEFAAP 219
Query: 196 EVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254
EV + G D+WS GV+ YILLSG+ PF E T + + + D + IS
Sbjct: 220 EVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISE 279
Query: 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
KD +R++L DP R+T Q LEHPWL D+ +
Sbjct: 280 DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQI 320
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 140/281 (49%), Gaps = 9/281 (3%)
Query: 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR 77
++ V+ HY LG G FGV + TE +T +A K + + ++ + +R+EIQ
Sbjct: 152 HDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE---SDKETVRKEIQTM 208
Query: 78 LYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVN 135
L P +V +ED+ + ++ E GG+LF+++ A +N SE +A +R +
Sbjct: 209 SVLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQVCK 266
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAP 195
+ H +H DLKPEN F ++ N L K+ DFG + Q + G+ + AP
Sbjct: 267 GLCHMHENNYVHLDLKPENIMFTTKRSNEL-KLIDFGLTAHLDPKQSVKVTTGTAEFAAP 325
Query: 196 EVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254
EV + G D+WS GV+ YILLSG+ PF E T + + + D + IS
Sbjct: 326 EVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISE 385
Query: 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
KD +R++L DP R+T Q LEHPWL D+ +
Sbjct: 386 DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQI 426
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 141/258 (54%), Gaps = 10/258 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 17 GRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR-HPNIL 75
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 76 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIH 135
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S N LK+ DFG ++ + + G+ Y+ PE++ R + +++
Sbjct: 136 RDIKPENLLLGS---NGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKV 191
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G+PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 192 DLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPD----FVTEGARDLISRLLKH 247
Query: 267 DPKRRITAAQVLEHPWLR 284
+ +R+T A+VLEHPW++
Sbjct: 248 NASQRLTLAEVLEHPWIK 265
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 133/268 (49%), Gaps = 38/268 (14%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
++LG G G T +A K + PK R RE+++ S P++V
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKAR--------REVELHWRASQCPHIVR 75
Query: 89 FKSTYEDETA----VHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVCHS 142
YE+ A + +VME +GG+LF RI +G +ER+A+ ++++I A+ HS
Sbjct: 76 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 135
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRRY 202
+ + HRD+KPEN + S+ NA+LK+TDFG A E +Y
Sbjct: 136 INIAHRDVKPENLLYTSKRPNAILKLTDFG--------------------FAKETTGEKY 175
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAE----TKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
K D+WS GVI+YILL G PPF++ G I G+ +F W +S K
Sbjct: 176 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKM 235
Query: 259 LVRRMLTKDPKRRITAAQVLEHPWLRES 286
L+R +L +P +R+T + + HPW+ +S
Sbjct: 236 LIRNLLKTEPTQRMTITEFMNHPWIMQS 263
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 138/257 (53%), Gaps = 10/257 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 76
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 77 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S + LK+ DFG ++ + D+ G+ Y+ PE++ R + +++
Sbjct: 137 RDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTDLCGTLDYLPPEMIEGRMHDEKV 192
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 248
Query: 267 DPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 249 NPSQRPMLREVLEHPWI 265
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 138/257 (53%), Gaps = 10/257 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 71
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S + LK+ DFG ++ + D+ G+ Y+ PE++ R + +++
Sbjct: 132 RDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTDLCGTLDYLPPEMIEGRMHDEKV 187
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 243
Query: 267 DPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 244 NPSQRPMLREVLEHPWI 260
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 138/257 (53%), Gaps = 10/257 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 39 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 97
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 98 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 157
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S + LK+ DFG ++ + D+ G+ Y+ PE++ R + +++
Sbjct: 158 RDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RDDLCGTLDYLPPEMIEGRMHDEKV 213
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 214 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 269
Query: 267 DPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 270 NPSQRPMLREVLEHPWI 286
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 138/257 (53%), Gaps = 10/257 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 71
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S + LK+ DFG ++ + D+ G+ Y+ PE++ R + +++
Sbjct: 132 RDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTDLCGTLDYLPPEMIEGRMHDEKV 187
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 243
Query: 267 DPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 244 NPSQRPMLREVLEHPWI 260
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 138/257 (53%), Gaps = 10/257 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 72
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 73 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 132
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S + LK+ DFG ++ + D+ G+ Y+ PE++ R + +++
Sbjct: 133 RDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTDLCGTLDYLPPEMIEGRMHDEKV 188
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 244
Query: 267 DPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 245 NPSQRPMLREVLEHPWI 261
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 138/257 (53%), Gaps = 10/257 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 76
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G+++ + E+ AT + + NA++ CHS V+H
Sbjct: 77 RLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S + LK+ DFG ++ + + G+ Y+ PE++ R + +++
Sbjct: 137 RDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKV 192
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 248
Query: 267 DPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 249 NPSQRPMLREVLEHPWI 265
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 138/257 (53%), Gaps = 10/257 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 76
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G+++ + E+ AT + + NA++ CHS V+H
Sbjct: 77 RLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S + LK+ DFG ++ + + G+ Y+ PE++ R + +++
Sbjct: 137 RDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RXXLXGTLDYLPPEMIEGRMHDEKV 192
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 248
Query: 267 DPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 249 NPSQRPMLREVLEHPWI 265
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 138/257 (53%), Gaps = 10/257 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 74
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S + LK+ DFG ++ + D+ G+ Y+ PE++ R + +++
Sbjct: 135 RDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RDDLCGTLDYLPPEMIEGRMHDEKV 190
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 246
Query: 267 DPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 247 NPSQRPMLREVLEHPWI 263
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/264 (34%), Positives = 131/264 (49%), Gaps = 10/264 (3%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
HY G LG G FG + T A K + ++ L IRREIQ L L
Sbjct: 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQ-NLKLFRH 75
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
P++++ + + +VME GG+LFD I G E+++ + + I++ V+ CH
Sbjct: 76 PHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH 135
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRRY- 202
V+HRDLKPEN + D + K+ DFG + + +G+ R GS Y APEV+ R
Sbjct: 136 MVVHRDLKPEN---VLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLY 192
Query: 203 -GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
G E+DIWS+GVILY LL G PF + + I G PS+ S L++
Sbjct: 193 AGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVIS----LLK 248
Query: 262 RMLTKDPKRRITAAQVLEHPWLRE 285
ML DP +R T + EH W ++
Sbjct: 249 HMLQVDPMKRATIKDIREHEWFKQ 272
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 139/258 (53%), Gaps = 12/258 (4%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 72
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 73 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 132
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD-IVGSGFYIAPEVLR-RRYGKE 205
RD+KPEN S + LK+ DFG ++ + RD + G+ Y+ PE++ R + ++
Sbjct: 133 RDIKPENLLLGSAGE---LKIADFGWSVHAPSSR--RDTLCGTLDYLPPEMIEGRMHDEK 187
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265
+D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLK 243
Query: 266 KDPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 244 HNPSQRPMLREVLEHPWI 261
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 138/257 (53%), Gaps = 10/257 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 71
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S + LK+ DFG ++ + ++ G+ Y+ PE++ R + +++
Sbjct: 132 RDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTELCGTLDYLPPEMIEGRMHDEKV 187
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 243
Query: 267 DPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 244 NPSQRPMLREVLEHPWI 260
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 137/257 (53%), Gaps = 10/257 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 30 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 88
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 89 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 148
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S + LK+ DFG ++ + + G+ Y+ PE++ R + +++
Sbjct: 149 RDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKV 204
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 205 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 260
Query: 267 DPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 261 NPSQRPMLREVLEHPWI 277
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 137/257 (53%), Gaps = 10/257 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 39 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 97
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 98 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 157
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S + LK+ DFG ++ + + G+ Y+ PE++ R + +++
Sbjct: 158 RDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKV 213
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 214 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 269
Query: 267 DPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 270 NPSQRPMLREVLEHPWI 286
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 138/257 (53%), Gaps = 10/257 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E ++ A K + K + +RRE++I+ +L PN++
Sbjct: 13 GRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 71
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 72 RLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKVIH 131
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S + LK+ DFG ++ + + G+ Y+ PE++ R + +++
Sbjct: 132 RDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RAALCGTLDYLPPEMIEGRMHDEKV 187
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPD----FVTEGARDLISRLLKH 243
Query: 267 DPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 244 NPSQRPMLREVLEHPWI 260
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 132/264 (50%), Gaps = 10/264 (3%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
HY G LG G FG + T A K + ++ L I+REIQ L L
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQ-NLKLFRH 70
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
P++++ T +VME GG+LFD I G E +A + + I++AV+ CH
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRRY- 202
V+HRDLKPEN + D + K+ DFG + + +G+ RD GS Y APEV+ R
Sbjct: 131 MVVHRDLKPEN---VLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLY 187
Query: 203 -GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
G E+DIWS GVILY LL G PF E + I +G + + + ++ + L+
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI-RGGVFYIPE---YLNRSVATLLM 243
Query: 262 RMLTKDPKRRITAAQVLEHPWLRE 285
ML DP +R T + EH W ++
Sbjct: 244 HMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 137/257 (53%), Gaps = 10/257 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 74
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S + LK+ DFG ++ + + G+ Y+ PE++ R + +++
Sbjct: 135 RDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 246
Query: 267 DPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 247 NPSQRPMLREVLEHPWI 263
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 137/257 (53%), Gaps = 10/257 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 15 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 73
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 74 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 133
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S + LK+ DFG ++ + + G+ Y+ PE++ R + +++
Sbjct: 134 RDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RXXLCGTLDYLPPEMIEGRMHDEKV 189
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 190 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 245
Query: 267 DPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 246 NPSQRPMLREVLEHPWI 262
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 137/257 (53%), Gaps = 10/257 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 74
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S + LK+ DFG ++ + + G+ Y+ PE++ R + +++
Sbjct: 135 RDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 246
Query: 267 DPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 247 NPSQRPMLREVLEHPWI 263
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 137/257 (53%), Gaps = 10/257 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 76
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 77 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S + LK+ DFG ++ + + G+ Y+ PE++ R + +++
Sbjct: 137 RDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKV 192
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 248
Query: 267 DPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 249 NPSQRPMLREVLEHPWI 265
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 137/257 (53%), Gaps = 10/257 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 74
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S + LK+ DFG ++ + + G+ Y+ PE++ R + +++
Sbjct: 135 RDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RXXLCGTLDYLPPEMIEGRMHDEKV 190
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 246
Query: 267 DPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 247 NPSQRPMLREVLEHPWI 263
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 141/270 (52%), Gaps = 10/270 (3%)
Query: 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREI 74
GK + + + GR LG+G+FG YL E + A K + K + +RRE+
Sbjct: 1 GKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 75 QIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIV 134
+I+ +L PN++ + D T V++++E G ++ + E+ AT + +
Sbjct: 61 EIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 119
Query: 135 NAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
NA++ CHS V+HRD+KPEN S + LK+ DFG + + + G+ Y+
Sbjct: 120 NALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSCHAPSSR-RTTLSGTLDYLP 175
Query: 195 PEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253
PE++ R + +++D+WS GV+ Y L G PPF A T + TY I + E F ++
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVT 231
Query: 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
A+DL+ R+L +P +R +VLEHPW+
Sbjct: 232 EGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 137/257 (53%), Gaps = 10/257 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 71
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S + LK+ DFG ++ + + G+ Y+ PE++ R + +++
Sbjct: 132 RDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKV 187
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 243
Query: 267 DPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 244 NPSQRPMLREVLEHPWI 260
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 136/257 (52%), Gaps = 10/257 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 76
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 77 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S + LK+ DFG ++ + + G+ Y+ PE + R + +++
Sbjct: 137 RDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEXIEGRXHDEKV 192
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 248
Query: 267 DPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 249 NPSQRPXLREVLEHPWI 265
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 137/257 (53%), Gaps = 10/257 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 12 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 70
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 71 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 130
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S + LK+ DFG ++ + + G+ Y+ PE++ R + +++
Sbjct: 131 RDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKV 186
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 187 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 242
Query: 267 DPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 243 NPSQRPMLREVLEHPWI 259
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 137/257 (53%), Gaps = 10/257 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 71
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S + LK+ DFG ++ + + G+ Y+ PE++ R + +++
Sbjct: 132 RDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RXXLCGTLDYLPPEMIEGRMHDEKV 187
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 243
Query: 267 DPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 244 NPSQRPMLREVLEHPWI 260
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 137/257 (53%), Gaps = 10/257 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 17 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 75
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 76 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 135
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S + LK+ DFG ++ + + G+ Y+ PE++ R + +++
Sbjct: 136 RDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKV 191
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 192 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 247
Query: 267 DPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 248 NPSQRPMLREVLEHPWI 264
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 137/257 (53%), Gaps = 10/257 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 71
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S + LK+ DFG ++ + + G+ Y+ PE++ R + +++
Sbjct: 132 RDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTXLCGTLDYLPPEMIEGRMHDEKV 187
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 243
Query: 267 DPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 244 NPSQRPMLREVLEHPWI 260
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 137/257 (53%), Gaps = 10/257 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 74
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S + LK+ DFG ++ + + G+ Y+ PE++ R + +++
Sbjct: 135 RDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RAALCGTLDYLPPEMIEGRMHDEKV 190
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 246
Query: 267 DPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 247 NPSQRPMLREVLEHPWI 263
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 137/257 (53%), Gaps = 10/257 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 71
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S + LK+ DFG ++ + + G+ Y+ PE++ R + +++
Sbjct: 132 RDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RAALCGTLDYLPPEMIEGRMHDEKV 187
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 243
Query: 267 DPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 244 NPSQRPMLREVLEHPWI 260
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 137/257 (53%), Gaps = 10/257 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 15 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 73
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 74 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 133
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S + LK+ +FG ++ + + G+ Y+ PE++ R + +++
Sbjct: 134 RDIKPENLLLGSAGE---LKIANFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKV 189
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 190 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 245
Query: 267 DPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 246 NPSQRPMLREVLEHPWI 262
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 136/257 (52%), Gaps = 10/257 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E A K + K + +RRE++I+ +L PN++
Sbjct: 10 GRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 68
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 69 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 128
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S + LK+ DFG ++ + + G+ Y+ PE++ R + +++
Sbjct: 129 RDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKV 184
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 185 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 240
Query: 267 DPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 241 NPSQRPMLREVLEHPWI 257
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 137/257 (53%), Gaps = 10/257 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E + A K + K + +RRE++I+ +L PN++
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 74
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ D T V++++E G ++ + E+ AT + + NA++ CHS V+H
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN S + LK+ +FG ++ + + G+ Y+ PE++ R + +++
Sbjct: 135 RDIKPENLLLGSAGE---LKIANFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R+L
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 246
Query: 267 DPKRRITAAQVLEHPWL 283
+P +R +VLEHPW+
Sbjct: 247 NPSQRPMLREVLEHPWI 263
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 140/258 (54%), Gaps = 10/258 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E A K + K + +RREI+I+ +L PN++
Sbjct: 20 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HPNIL 78
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ + D +++++E G+L+ + G E+ +AT + + +A++ CH V+H
Sbjct: 79 RMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIH 138
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN + + LK+ DFG + + R + G+ Y+ PE++ + + +++
Sbjct: 139 RDIKPENLLMGYKGE---LKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKV 194
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+W AGV+ Y L G+PPF + + T+ I+ ++ F P +S +KDL+ ++L
Sbjct: 195 DLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKLLRY 250
Query: 267 DPKRRITAAQVLEHPWLR 284
P +R+ V+EHPW++
Sbjct: 251 HPPQRLPLKGVMEHPWVK 268
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/264 (34%), Positives = 131/264 (49%), Gaps = 10/264 (3%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
HY G LG G FG + T A K + ++ L I+REIQ L L
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQ-NLKLFRH 70
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
P++++ T +VME GG+LFD I G E +A + + I++AV+ CH
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRRY- 202
V+HRDLKPEN + D + K+ DFG + + +G+ R GS Y APEV+ R
Sbjct: 131 MVVHRDLKPEN---VLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLY 187
Query: 203 -GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
G E+DIWS GVILY LL G PF E + I +G + + + ++ + L+
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI-RGGVFYIPE---YLNRSVATLLM 243
Query: 262 RMLTKDPKRRITAAQVLEHPWLRE 285
ML DP +R T + EH W ++
Sbjct: 244 HMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 140/258 (54%), Gaps = 10/258 (3%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
GR LG+G+FG YL E A K + K + +RREI+I+ +L PN++
Sbjct: 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HPNIL 77
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ + D +++++E G+L+ + G E+ +AT + + +A++ CH V+H
Sbjct: 78 RMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIH 137
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
RD+KPEN + + LK+ DFG + + R + G+ Y+ PE++ + + +++
Sbjct: 138 RDIKPENLLMGYKGE---LKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKV 193
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+W AGV+ Y L G+PPF + + T+ I+ ++ F P +S +KDL+ ++L
Sbjct: 194 DLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKLLRY 249
Query: 267 DPKRRITAAQVLEHPWLR 284
P +R+ V+EHPW++
Sbjct: 250 HPPQRLPLKGVMEHPWVK 267
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 149/293 (50%), Gaps = 34/293 (11%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89
+LG G C T++ YA K I K+P + + RE+++ G NV+E
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSR---VFREVEMLYQCQGHRNVLEL 76
Query: 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRD 149
+E+E ++V E GG + I + + +E +A+ V++ + +A++ H+ G+ HRD
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 150 LKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI--------VGSGFYIAPEVLR-- 199
LKPEN + + +K+ DFG + I GS Y+APEV+
Sbjct: 137 LKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAF 196
Query: 200 ----RRYGKEIDIWSAGVILYILLSGVPPF---------W------AETKKGTYDAILQG 240
Y K D+WS GVILYILLSG PPF W + +++I +G
Sbjct: 197 SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEG 256
Query: 241 EIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDT 293
+ +F W IS AKDL+ ++L +D K+R++AAQVL+HPW++ G A ++T
Sbjct: 257 KYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ--GCAPENT 307
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 141/274 (51%), Gaps = 14/274 (5%)
Query: 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQ 75
K Y++++ +Y +G G F L T A K + K ++ I+ EI+
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG--SDLPRIKTEIE 60
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN 135
L Q ++ + E + +V+E C GG+LFD II++ SE + V R IV+
Sbjct: 61 ALKNLRHQ-HICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVS 119
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY--RDIVGSGFYI 193
AV HS G HRDLKPEN F D+ LK+ DFG + + Y + GS Y
Sbjct: 120 AVAYVHSQGYAHRDLKPENLLF---DEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYA 176
Query: 194 APEVLRRR--YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251
APE+++ + G E D+WS G++LY+L+ G PF + Y I++G+ +D W S
Sbjct: 177 APELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGK--YDVPKWLS 234
Query: 252 ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
SS L+++ML DPK+RI+ +L HPW+ +
Sbjct: 235 PSSIL--LLQQMLQVDPKKRISMKNLLNHPWIMQ 266
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 132/258 (51%), Gaps = 4/258 (1%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LGRG+F V C ST + YA K + K+ + + +++ EI + P V+
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILH-EIAVLELAKSCPRVINLH 95
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVCHSMGVMHR 148
YE+ + + +++E GG++F + + SE D +++ I+ V H ++H
Sbjct: 96 EVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHL 155
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEID 207
DLKP+N S +K+ DFG + R+I+G+ Y+APE+L D
Sbjct: 156 DLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATD 215
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
+W+ G+I Y+LL+ PF E + TY I Q +D+ + + S+S A D ++ +L K+
Sbjct: 216 MWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKN 275
Query: 268 PKRRITAAQVLEHPWLRE 285
P++R TA L H WL++
Sbjct: 276 PEKRPTAEICLSHSWLQQ 293
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 139/257 (54%), Gaps = 10/257 (3%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R LG+G+FG YL E A K + K + +RREI+I+ +L PN++
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HPNILR 78
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ + D +++++E G+L+ + G E+ +AT + + +A++ CH V+HR
Sbjct: 79 MYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHR 138
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEID 207
D+KPEN + + LK+ DFG + + R + G+ Y+ PE++ + + +++D
Sbjct: 139 DIKPENLLMGYKGE---LKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVD 194
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
+W AGV+ Y L G+PPF + + T+ I+ ++ F P +S +KDL+ ++L
Sbjct: 195 LWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKLLRYH 250
Query: 268 PKRRITAAQVLEHPWLR 284
P +R+ V+EHPW++
Sbjct: 251 PPQRLPLKGVMEHPWVK 267
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 142/267 (53%), Gaps = 11/267 (4%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
+Y + +G+G F L T R A K I K ++ + RE++I L+
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIK-IIDKTQLNPTSLQKLFREVRIMKILN-H 70
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
PN+V+ E E ++++ME GG++FD ++A G E++A + R IV+AV CH
Sbjct: 71 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK 130
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRY 202
++HRDLK EN D + +K+ DFG + F G GS Y APE+ + ++Y
Sbjct: 131 RIVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKY 187
Query: 203 -GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
G E+D+WS GVILY L+SG PF + K + +L+G+ P+ +S+ ++L++
Sbjct: 188 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLLK 243
Query: 262 RMLTKDPKRRITAAQVLEHPWLRESGE 288
R L +P +R T Q+++ W+ E
Sbjct: 244 RFLVLNPIKRGTLEQIMKDRWINAGHE 270
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 146/310 (47%), Gaps = 50/310 (16%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-GQ 83
Y +G+G +GV + EN T A K + K ++ D+ R + ++RL
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH 87
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRI--------------IAK----------- 118
PN+ YEDE + +VMELC GG L D++ + K
Sbjct: 88 PNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNE 147
Query: 119 --------GY-------NSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDN 163
G+ E+ + ++R I +A++ H+ G+ HRD+KPENF F S + +
Sbjct: 148 EAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLF-STNKS 206
Query: 164 ALLKVTDFGSALLF---EEGQVY--RDIVGSGFYIAPEVLR---RRYGKEIDIWSAGVIL 215
+K+ DFG + F G+ Y G+ +++APEVL YG + D WSAGV+L
Sbjct: 207 FEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
Query: 216 YILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAA 275
++LL G PF T +L ++ F+ + +S A+DL+ +L ++ R A
Sbjct: 267 HLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAM 326
Query: 276 QVLEHPWLRE 285
+ L+HPW+ +
Sbjct: 327 RALQHPWISQ 336
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 149/293 (50%), Gaps = 34/293 (11%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89
+LG G C T++ YA K I K+P + + RE+++ G NV+E
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSR---VFREVEMLYQCQGHRNVLEL 76
Query: 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRD 149
+E+E ++V E GG + I + + +E +A+ V++ + +A++ H+ G+ HRD
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 150 LKPENFSFISRDDNALLKVTDF--GSALLFE------EGQVYRDIVGSGFYIAPEVLR-- 199
LKPEN + + +K+ DF GS + GS Y+APEV+
Sbjct: 137 LKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAF 196
Query: 200 ----RRYGKEIDIWSAGVILYILLSGVPPF---------W------AETKKGTYDAILQG 240
Y K D+WS GVILYILLSG PPF W + +++I +G
Sbjct: 197 SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEG 256
Query: 241 EIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDT 293
+ +F W IS AKDL+ ++L +D K+R++AAQVL+HPW++ G A ++T
Sbjct: 257 KYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ--GCAPENT 307
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 143/267 (53%), Gaps = 11/267 (4%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
+Y + +G+G F L T + A K I K ++ + + RE++I L+
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVK-IIDKTQLNSSSLQKLFREVRIMKVLN-H 65
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
PN+V+ E E +++VME GG++FD ++A G+ E++A R IV+AV CH
Sbjct: 66 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQK 125
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRY 202
++HRDLK EN D + +K+ DFG + F G GS Y APE+ + ++Y
Sbjct: 126 FIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKY 182
Query: 203 -GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
G E+D+WS GVILY L+SG PF + K + +L+G+ P+ +S+ ++L++
Sbjct: 183 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLLK 238
Query: 262 RMLTKDPKRRITAAQVLEHPWLRESGE 288
+ L +P +R T Q+++ W+ E
Sbjct: 239 KFLILNPSKRGTLEQIMKDRWMNVGHE 265
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 134/260 (51%), Gaps = 16/260 (6%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G FGV+ L + +N A K I + K+ ++ ++REI L PN+V FK
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKI----DENVKREIINHRSLR-HPNIVRFK 80
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
T + +VME GG+LF+RI G SE +A + +++ V+ CH+M V HRDL
Sbjct: 81 EVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 140
Query: 151 KPENFSFISRDDNALLKVTDFG---SALLFEEGQVYRDIVGSGFYIAPEV-LRRRY-GKE 205
K EN + + LK+ DFG S++L + + VG+ YIAPEV L++ Y GK
Sbjct: 141 KLEN-TLLDGSPAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLLKKEYDGKV 196
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG--EIDFDTDPWPSISSTAKDLVRRM 263
D+WS GV LY++L G PF + + + + + + IS + L+ R+
Sbjct: 197 ADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRI 256
Query: 264 LTKDPKRRITAAQVLEHPWL 283
DP +RI+ ++ H W
Sbjct: 257 FVADPAKRISIPEIRNHEWF 276
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 134/260 (51%), Gaps = 16/260 (6%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G FGV+ L + +N A K I + K +A N ++REI L PN+V FK
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEK--IAAN--VKREIINHRSLR-HPNIVRFK 81
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
T + +VME GG+LF+RI G SE +A + +++ V+ CH+M V HRDL
Sbjct: 82 EVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 151 KPENFSFISRDDNALLKVTDFG---SALLFEEGQVYRDIVGSGFYIAPEV-LRRRY-GKE 205
K EN + + LK+ DFG S++L + + VG+ YIAPEV L++ Y GK
Sbjct: 142 KLEN-TLLDGSPAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLLKKEYDGKV 197
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG--EIDFDTDPWPSISSTAKDLVRRM 263
D+WS GV LY++L G PF + + + + + + IS + L+ R+
Sbjct: 198 ADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRI 257
Query: 264 LTKDPKRRITAAQVLEHPWL 283
DP +RI+ ++ H W
Sbjct: 258 FVADPAKRISIPEIRNHEWF 277
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 133/259 (51%), Gaps = 10/259 (3%)
Query: 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS 81
M Y GR LG+G F Y T+ T +A K + K ++ + + + EI I L
Sbjct: 25 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 84
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
P+VV F +ED+ V+VV+E+C L + + +E +A +R + V H
Sbjct: 85 -NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH 143
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVL-R 199
+ V+HRDLK N +D+ +K+ DFG A E +G+ +D+ G+ YIAPEVL +
Sbjct: 144 NNRVIHRDLKLGNLFL---NDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCK 200
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259
+ + E+DIWS G ILY LL G PPF K TY I + E I+ A L
Sbjct: 201 KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASAL 256
Query: 260 VRRMLTKDPKRRITAAQVL 278
+RRML DP R + A++L
Sbjct: 257 IRRMLHADPTLRPSVAELL 275
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 133/259 (51%), Gaps = 10/259 (3%)
Query: 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS 81
M Y GR LG+G F Y T+ T +A K + K ++ + + + EI I L
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
P+VV F +ED+ V+VV+E+C L + + +E +A +R + V H
Sbjct: 101 -NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH 159
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVL-R 199
+ V+HRDLK N +D+ +K+ DFG A E +G+ +D+ G+ YIAPEVL +
Sbjct: 160 NNRVIHRDLKLGNLFL---NDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCK 216
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259
+ + E+DIWS G ILY LL G PPF K TY I + E I+ A L
Sbjct: 217 KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASAL 272
Query: 260 VRRMLTKDPKRRITAAQVL 278
+RRML DP R + A++L
Sbjct: 273 IRRMLHADPTLRPSVAELL 291
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 142/267 (53%), Gaps = 11/267 (4%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
+Y + +G+G F L T R A K I K ++ + RE++I L+
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIK-IIDKTQLNPTSLQKLFREVRIMKILN-H 73
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
PN+V+ E E ++++ME GG++FD ++A G E++A + R IV+AV CH
Sbjct: 74 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK 133
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRY 202
++HRDLK EN D + +K+ DFG + F G G+ Y APE+ + ++Y
Sbjct: 134 RIVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKY 190
Query: 203 -GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
G E+D+WS GVILY L+SG PF + K + +L+G+ P+ +S+ ++L++
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLLK 246
Query: 262 RMLTKDPKRRITAAQVLEHPWLRESGE 288
R L +P +R T Q+++ W+ E
Sbjct: 247 RFLVLNPIKRGTLEQIMKDRWINAGHE 273
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 134/260 (51%), Gaps = 16/260 (6%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G FGV+ L + +N A K I + K+ ++ ++REI L PN+V FK
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKI----DENVKREIINHRSLR-HPNIVRFK 81
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
T + +VME GG+LF+RI G SE +A + +++ V+ CH+M V HRDL
Sbjct: 82 EVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 151 KPENFSFISRDDNALLKVTDFG---SALLFEEGQVYRDIVGSGFYIAPEV-LRRRY-GKE 205
K EN + + LK+ FG S++L + +D VG+ YIAPEV L++ Y GK
Sbjct: 142 KLEN-TLLDGSPAPRLKICAFGYSKSSVLHSQP---KDTVGTPAYIAPEVLLKKEYDGKV 197
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG--EIDFDTDPWPSISSTAKDLVRRM 263
D+WS GV LY++L G PF + + + + + + IS + L+ R+
Sbjct: 198 ADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRI 257
Query: 264 LTKDPKRRITAAQVLEHPWL 283
DP +RI+ ++ H W
Sbjct: 258 FVADPAKRISIPEIRNHEWF 277
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 147/284 (51%), Gaps = 19/284 (6%)
Query: 2 GCSVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPK 61
G S + P +G +Y + +G+G F L T + A K I K +
Sbjct: 1 GNSATSADEQPHIG--------NYRLLKTIGKGNFAKVKLARHILTGKEVAVK-IIDKTQ 51
Query: 62 MRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN 121
+ + + RE++I L+ PN+V+ E E +++VME GG++FD ++A G
Sbjct: 52 LNSSSLQKLFREVRIMKVLN-HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRM 110
Query: 122 SERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181
E++A R IV+AV CH ++HRDLK EN D + +K+ DFG + F G
Sbjct: 111 KEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGN 167
Query: 182 VYRDIVGSGFYIAPEVLR-RRY-GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ 239
GS Y APE+ + ++Y G E+D+WS GVILY L+SG PF + K + +L+
Sbjct: 168 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
Query: 240 GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
G+ P+ +S+ ++L+++ L +P +R T Q+++ W+
Sbjct: 228 GKYRI---PF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 144/272 (52%), Gaps = 16/272 (5%)
Query: 20 DVMLHYF------FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRRE 73
D++ +F GR LG+G+FG YL E ++ A K + K + +RRE
Sbjct: 14 DILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRRE 73
Query: 74 IQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAI 133
I+I+ +L PN++ + + D +++++E G+L+ + E+ AT++ +
Sbjct: 74 IEIQAHLH-HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEEL 132
Query: 134 VNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI 193
+A+ CH V+HRD+KPEN + LK+ DFG + + + + G+ Y+
Sbjct: 133 ADALMYCHGKKVIHRDIKPEN---LLLGLKGELKIADFGWS-VHAPSLRRKTMCGTLDYL 188
Query: 194 APEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252
PE++ R + +++D+W GV+ Y LL G PPF + + TY I++ ++ F S+
Sbjct: 189 PPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPA----SV 244
Query: 253 SSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
+ A+DL+ ++L +P R+ AQV HPW+R
Sbjct: 245 PTGAQDLISKLLRHNPSERLPLAQVSAHPWVR 276
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 148/284 (52%), Gaps = 19/284 (6%)
Query: 2 GCSVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPK 61
G S + P +G +Y + +G+G F L T + A + I K +
Sbjct: 1 GNSATSADEQPHIG--------NYRLLKTIGKGNFAKVKLARHILTGKEVAVR-IIDKTQ 51
Query: 62 MRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN 121
+ + + RE++I L+ PN+V+ E E +++VME GG++FD ++A G
Sbjct: 52 LNSSSLQKLFREVRIMKVLN-HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRM 110
Query: 122 SERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181
E++A R IV+AV CH ++HRDLK EN D + +K+ DFG + F G
Sbjct: 111 KEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGN 167
Query: 182 VYRDIVGSGFYIAPEVLR-RRY-GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ 239
+ GS Y APE+ + ++Y G E+D+WS GVILY L+SG PF + K + +L+
Sbjct: 168 KLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
Query: 240 GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
G+ P+ +S+ ++L+++ L +P +R T Q+++ W+
Sbjct: 228 GKYRI---PF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 147/284 (51%), Gaps = 19/284 (6%)
Query: 2 GCSVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPK 61
G S + P +G +Y + +G+G F L T + A K I K +
Sbjct: 1 GNSATSADEQPHIG--------NYRLLKTIGKGNFAKVKLARHILTGKEVAVK-IIDKTQ 51
Query: 62 MRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN 121
+ + + RE++I L+ PN+V+ E E +++VME GG++FD ++A G
Sbjct: 52 LNSSSLQKLFREVRIMKVLN-HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRM 110
Query: 122 SERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181
E++A R IV+AV CH ++HRDLK EN D + +K+ DFG + F G
Sbjct: 111 KEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGN 167
Query: 182 VYRDIVGSGFYIAPEVLR-RRY-GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ 239
GS Y APE+ + ++Y G E+D+WS GVILY L+SG PF + K + +L+
Sbjct: 168 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
Query: 240 GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
G+ P+ +S+ ++L+++ L +P +R T Q+++ W+
Sbjct: 228 GKYRI---PF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 135/267 (50%), Gaps = 23/267 (8%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM---IRREIQIRLYLS 81
Y LG G FG L T T + A K I+++ L ++DM + REI L L
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQ---LLKKSDMHMRVEREISY-LKLL 66
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
P++++ T + +V+E GG+LFD I+ K +E + + I+ A+ CH
Sbjct: 67 RHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCH 125
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRR 201
++HRDLKPEN DDN +K+ DFG + + +G + GS Y APEV+ +
Sbjct: 126 RHKIVHRDLKPENLLL---DDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGK 182
Query: 202 Y--GKEIDIWSAGVILYILLSGVPPFWAETKKGTY---DAILQGEIDFDTDPWPSISSTA 256
G E+D+WS G++LY++L G PF E + ++ + DF +S A
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDF-------LSPGA 235
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWL 283
+ L+RRM+ DP +RIT ++ PW
Sbjct: 236 QSLIRRMIVADPMQRITIQEIRRDPWF 262
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 147/284 (51%), Gaps = 19/284 (6%)
Query: 2 GCSVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPK 61
G S + P +G +Y + +G+G F L T + A + I K +
Sbjct: 1 GNSATSADEQPHIG--------NYRLLKTIGKGNFAKVKLARHILTGKEVAVR-IIDKTQ 51
Query: 62 MRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN 121
+ + + RE++I L+ PN+V+ E E +++VME GG++FD ++A G
Sbjct: 52 LNSSSLQKLFREVRIMKVLN-HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRM 110
Query: 122 SERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181
E++A R IV+AV CH ++HRDLK EN D + +K+ DFG + F G
Sbjct: 111 KEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGN 167
Query: 182 VYRDIVGSGFYIAPEVLR-RRY-GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ 239
GS Y APE+ + ++Y G E+D+WS GVILY L+SG PF + K + +L+
Sbjct: 168 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
Query: 240 GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
G+ P+ +S+ ++L+++ L +P +R T Q+++ W+
Sbjct: 228 GKYRI---PF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 135/264 (51%), Gaps = 18/264 (6%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R LG G FG +L R YA K + K+ +RL + + E ++ L + P ++
Sbjct: 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDE-RLMLSIVTHPFIIR 70
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA-IVNAVNVCHSMGVMH 147
T++D + ++M+ EGG+LF ++ K A A + A+ HS +++
Sbjct: 71 MWGTFQDAQQIFMIMDYIEGGELFS-LLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIY 129
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKEI 206
RDLKPEN I D N +K+TDFG A + V + G+ YIAPEV+ + Y K I
Sbjct: 130 RDLKPEN---ILLDKNGHIKITDFGFAKYVPD--VTYXLCGTPDYIAPEVVSTKPYNKSI 184
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D WS G+++Y +L+G PF+ TY+ IL E+ F P + KDL+ R++T+
Sbjct: 185 DWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDLLSRLITR 240
Query: 267 DPKRRITAAQ-----VLEHPWLRE 285
D +R+ Q V HPW +E
Sbjct: 241 DLSQRLGNLQNGTEDVKNHPWFKE 264
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 147/284 (51%), Gaps = 19/284 (6%)
Query: 2 GCSVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPK 61
G S + P +G +Y + +G+G F L T + A K I K +
Sbjct: 1 GNSATSADEQPHIG--------NYRLLKTIGKGNFAKVKLARHILTGKEVAVK-IIDKTQ 51
Query: 62 MRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN 121
+ + + RE++I L+ PN+V+ E E +++VME GG++FD ++A G
Sbjct: 52 LNSSSLQKLFREVRIMKVLN-HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRM 110
Query: 122 SERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181
E++A R IV+AV CH ++HRDLK EN D + +K+ DFG + F G
Sbjct: 111 KEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGN 167
Query: 182 VYRDIVGSGFYIAPEVLR-RRY-GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ 239
G+ Y APE+ + ++Y G E+D+WS GVILY L+SG PF + K + +L+
Sbjct: 168 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
Query: 240 GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
G+ P+ +S+ ++L+++ L +P +R T Q+++ W+
Sbjct: 228 GKYRI---PF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 16/260 (6%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G FGV+ L + +N A K I + K+ ++ ++REI L PN+V FK
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKI----DENVKREIINHRSLR-HPNIVRFK 81
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
T + +VME GG+LF+RI G SE +A + +++ V+ CH+M V HRDL
Sbjct: 82 EVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 151 KPENFSFISRDDNALLKVTDFG---SALLFEEGQVYRDIVGSGFYIAPEV-LRRRY-GKE 205
K EN + + LK+ FG S++L + + VG+ YIAPEV L++ Y GK
Sbjct: 142 KLEN-TLLDGSPAPRLKICAFGYSKSSVLHSQP---KSTVGTPAYIAPEVLLKKEYDGKV 197
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG--EIDFDTDPWPSISSTAKDLVRRM 263
D+WS GV LY++L G PF + + + + + + IS + L+ R+
Sbjct: 198 ADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRI 257
Query: 264 LTKDPKRRITAAQVLEHPWL 283
DP +RI+ ++ H W
Sbjct: 258 FVADPAKRISIPEIRNHEWF 277
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 132/259 (50%), Gaps = 10/259 (3%)
Query: 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS 81
M Y GR LG+G F Y T+ T +A K + K ++ + + + EI I L
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
P+VV F +ED+ V+VV+E+C L + + +E +A +R + V H
Sbjct: 101 -NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH 159
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVL-R 199
+ V+HRDLK N +D+ +K+ DFG A E +G+ + + G+ YIAPEVL +
Sbjct: 160 NNRVIHRDLKLGNLFL---NDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCK 216
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259
+ + E+DIWS G ILY LL G PPF K TY I + E I+ A L
Sbjct: 217 KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASAL 272
Query: 260 VRRMLTKDPKRRITAAQVL 278
+RRML DP R + A++L
Sbjct: 273 IRRMLHADPTLRPSVAELL 291
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 132/259 (50%), Gaps = 10/259 (3%)
Query: 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS 81
M Y GR LG+G F Y T+ T +A K + K ++ + + + EI I L
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
P+VV F +ED+ V+VV+E+C L + + +E +A +R + V H
Sbjct: 101 -NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH 159
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVL-R 199
+ V+HRDLK N +D+ +K+ DFG A E +G+ + + G+ YIAPEVL +
Sbjct: 160 NNRVIHRDLKLGNLFL---NDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCK 216
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259
+ + E+DIWS G ILY LL G PPF K TY I + E I+ A L
Sbjct: 217 KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASAL 272
Query: 260 VRRMLTKDPKRRITAAQVL 278
+RRML DP R + A++L
Sbjct: 273 IRRMLHADPTLRPSVAELL 291
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 149/284 (52%), Gaps = 18/284 (6%)
Query: 14 LGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRRE 73
+G+ ED + G +LG+G F Y T A K I KK + ++ E
Sbjct: 6 IGEKIED----FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNE 61
Query: 74 IQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVLR 131
++I L P+++E + +ED V++V+E+C G++ +R + SE +A +
Sbjct: 62 VKIHCQLK-HPSILELYNYFEDSNYVYLVLEMCHNGEM-NRYLKNRVKPFSENEARHFMH 119
Query: 132 AIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSG 190
I+ + HS G++HRDL N ++R+ N +K+ DFG A + + + + G+
Sbjct: 120 QIITGMLYLHSHGILHRDLTLSNL-LLTRNMN--IKIADFGLATQLKMPHEKHYTLCGTP 176
Query: 191 FYIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPW 249
YI+PE+ R +G E D+WS G + Y LL G PPF +T K T + ++ D++ +
Sbjct: 177 NYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA--DYEMPSF 234
Query: 250 PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL-RESGEASDD 292
SI AKDL+ ++L ++P R++ + VL+HP++ R S S D
Sbjct: 235 LSIE--AKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSSTKSKD 276
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 128/257 (49%), Gaps = 10/257 (3%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G FGV+ L + N A K I + K+ ++ ++REI L PN+V FK
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKI----DENVKREIINHRSLR-HPNIVRFK 81
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
T + +VME GG+LF+RI G SE +A + +++ V+ H+M V HRDL
Sbjct: 82 EVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDL 141
Query: 151 KPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRY-GKEIDI 208
K EN + + LK+ DFG + + VG+ YIAPEV L++ Y GK D+
Sbjct: 142 KLEN-TLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADV 200
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQG--EIDFDTDPWPSISSTAKDLVRRMLTK 266
WS GV LY++L G PF + + + + + + IS + L+ R+
Sbjct: 201 WSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVA 260
Query: 267 DPKRRITAAQVLEHPWL 283
DP +RI+ ++ H W
Sbjct: 261 DPAKRISIPEIRNHEWF 277
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 140/285 (49%), Gaps = 20/285 (7%)
Query: 10 RDPILGKAYEDVMLH----YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA 65
R P+ + ++H Y F + +G G FGV+ L + T A K I + A
Sbjct: 3 RAPVTTGPLDMPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERG----AA 58
Query: 66 ENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERD 125
++ ++REI L PN+V FK T + ++ME GG+L++RI G SE +
Sbjct: 59 IDENVQREIINHRSLR-HPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDE 117
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG---SALLFEEGQV 182
A + +++ V+ CHSM + HRDLK EN + + LK+ DFG S++L +
Sbjct: 118 ARFFFQQLLSGVSYCHSMQICHRDLKLEN-TLLDGSPAPRLKICDFGYSKSSVLHSQP-- 174
Query: 183 YRDIVGSGFYIAPEV-LRRRY-GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG 240
+ VG+ YIAPEV LR+ Y GK D+WS GV LY++L G PF + Y +Q
Sbjct: 175 -KSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQR 233
Query: 241 --EIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+ + IS L+ R+ DP RI+ ++ H W
Sbjct: 234 ILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWF 278
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 144/283 (50%), Gaps = 19/283 (6%)
Query: 2 GCSVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPK 61
G S + P +G +Y + +G+G F L T + A K I K +
Sbjct: 1 GNSATSADEQPHIG--------NYRLLKTIGKGNFAKVKLARHILTGKEVAVK-IIDKTQ 51
Query: 62 MRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN 121
+ + + RE++I L+ PN+V+ E E +++V E GG++FD ++A G
Sbjct: 52 LNSSSLQKLFREVRIXKVLN-HPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRX 110
Query: 122 SERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181
E++A R IV+AV CH ++HRDLK EN + D N +K+ DFG + F G
Sbjct: 111 KEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENL-LLDADXN--IKIADFGFSNEFTFGN 167
Query: 182 VYRDIVGSGFYIAPEVLR-RRY-GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ 239
G+ Y APE+ + ++Y G E+D+WS GVILY L+SG PF + K + +L+
Sbjct: 168 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
Query: 240 GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPW 282
G+ P+ S+ ++L+++ L +P +R T Q+ + W
Sbjct: 228 GKYRI---PF-YXSTDCENLLKKFLILNPSKRGTLEQIXKDRW 266
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 137/266 (51%), Gaps = 17/266 (6%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM---IRREIQIRLYL 80
+Y + LG G FG L +T + A K I KK LA++DM I REI L L
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKK---VLAKSDMQGRIEREIS-YLRL 70
Query: 81 SGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC 140
P++++ + + + +V+E G +LFD I+ + SE++A + I++AV C
Sbjct: 71 LRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYC 129
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR 200
H ++HRDLKPEN D++ +K+ DFG + + +G + GS Y APEV+
Sbjct: 130 HRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG 186
Query: 201 RY--GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
+ G E+D+WS GVILY++L PF E+ + I G +S A
Sbjct: 187 KLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAG 242
Query: 259 LVRRMLTKDPKRRITAAQVLEHPWLR 284
L++RML +P RI+ ++++ W +
Sbjct: 243 LIKRMLIVNPLNRISIHEIMQDDWFK 268
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 137/266 (51%), Gaps = 17/266 (6%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM---IRREIQIRLYL 80
+Y + LG G FG L +T + A K I KK LA++DM I REI L L
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKK---VLAKSDMQGRIEREIS-YLRL 69
Query: 81 SGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC 140
P++++ + + + +V+E G +LFD I+ + SE++A + I++AV C
Sbjct: 70 LRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYC 128
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR 200
H ++HRDLKPEN D++ +K+ DFG + + +G + GS Y APEV+
Sbjct: 129 HRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG 185
Query: 201 RY--GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
+ G E+D+WS GVILY++L PF E+ + I G +S A
Sbjct: 186 KLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAG 241
Query: 259 LVRRMLTKDPKRRITAAQVLEHPWLR 284
L++RML +P RI+ ++++ W +
Sbjct: 242 LIKRMLIVNPLNRISIHEIMQDDWFK 267
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM---IRREIQIRLYLS 81
Y + LG G FG L +T + A K I KK LA++DM I REI L L
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKK---VLAKSDMQGRIEREIS-YLRLL 61
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
P++++ + + + +V+E G +LFD I+ + SE++A + I++AV CH
Sbjct: 62 RHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 120
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRR 201
++HRDLKPEN D++ +K+ DFG + + +G + GS Y APEV+ +
Sbjct: 121 RHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGK 177
Query: 202 Y--GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259
G E+D+WS GVILY++L PF E+ + I G +S A L
Sbjct: 178 LYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGL 233
Query: 260 VRRMLTKDPKRRITAAQVLEHPWLR 284
++RML +P RI+ ++++ W +
Sbjct: 234 IKRMLIVNPLNRISIHEIMQDDWFK 258
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 137/266 (51%), Gaps = 17/266 (6%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM---IRREIQIRLYL 80
+Y + LG G FG L +T + A K I KK LA++DM I REI L L
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKK---VLAKSDMQGRIEREIS-YLRL 64
Query: 81 SGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC 140
P++++ + + + +V+E G +LFD I+ + SE++A + I++AV C
Sbjct: 65 LRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYC 123
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR 200
H ++HRDLKPEN D++ +K+ DFG + + +G + GS Y APEV+
Sbjct: 124 HRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG 180
Query: 201 RY--GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
+ G E+D+WS GVILY++L PF E+ + I G +S A
Sbjct: 181 KLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAG 236
Query: 259 LVRRMLTKDPKRRITAAQVLEHPWLR 284
L++RML +P RI+ ++++ W +
Sbjct: 237 LIKRMLIVNPLNRISIHEIMQDDWFK 262
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 156/307 (50%), Gaps = 14/307 (4%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
+Y + +G+G F L T R A K I K ++ + RE++I L+
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVK-IIDKTQLNPTSLQKLFREVRIMKILN-H 73
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
PN+V+ E E +++VME GG++FD ++A G E++A R IV+AV CH
Sbjct: 74 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 133
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRY 202
++HRDLK EN D + +K+ DFG + F G GS Y APE+ + ++Y
Sbjct: 134 YIVHRDLKAENLLL---DGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKY 190
Query: 203 -GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
G E+D+WS GVILY L+SG PF + K + +L+G+ P+ +S+ ++L++
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLLK 246
Query: 262 RMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMNKLKKLTIKVIVEYLP 321
++L +P +R + Q+++ W+ E + F N K++ I V + +
Sbjct: 247 KLLVLNPIKRGSLEQIMKDRWMNVGHEEEELKPYTEPDPDF---NDTKRIDIMVTMGFAR 303
Query: 322 DEETQAL 328
DE AL
Sbjct: 304 DEINDAL 310
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 145/268 (54%), Gaps = 20/268 (7%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++GRG FG L ++ + YA K ++K ++ +++ E I + + P VV+
Sbjct: 81 KVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDI-MAFANSPWVVQ 139
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA-IVNAVNVCHSMGVMH 147
++D+ +++VME GGDL + + Y+ A A +V A++ HSMG++H
Sbjct: 140 LFCAFQDDKYLYMVMEYMPGGDLVN--LMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIH 197
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEE-GQVYRDI-VGSGFYIAPEVLRRR---- 201
RD+KP+N D + LK+ DFG+ + +E G V+ D VG+ YI+PEVL+ +
Sbjct: 198 RDVKPDNMLL---DKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDG 254
Query: 202 -YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL--QGEIDFDTDPWPSISSTAKD 258
YG+E D WS GV L+ +L G PF+A++ GTY I+ + + F D IS AK+
Sbjct: 255 YYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPED--AEISKHAKN 312
Query: 259 LVRRMLTKDPKR--RITAAQVLEHPWLR 284
L+ LT R R ++ +HP+ +
Sbjct: 313 LICAFLTDREVRLGRNGVEEIKQHPFFK 340
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 135/247 (54%), Gaps = 18/247 (7%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++GRG FG L ST + YA K ++K ++ +++ E I + + P VV+
Sbjct: 75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI-MAFANSPWVVQ 133
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA-IVNAVNVCHSMGVMH 147
++D+ +++VME GGDL + + Y+ A A +V A++ HSMG +H
Sbjct: 134 LFYAFQDDRYLYMVMEYMPGGDLVN--LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH 191
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSAL-LFEEGQVYRDI-VGSGFYIAPEVLRRR---- 201
RD+KP+N D + LK+ DFG+ + + +EG V D VG+ YI+PEVL+ +
Sbjct: 192 RDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDG 248
Query: 202 -YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL--QGEIDFDTDPWPSISSTAKD 258
YG+E D WS GV LY +L G PF+A++ GTY I+ + + F D IS AK+
Sbjct: 249 YYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISKEAKN 306
Query: 259 LVRRMLT 265
L+ LT
Sbjct: 307 LICAFLT 313
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 135/247 (54%), Gaps = 18/247 (7%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++GRG FG L ST + YA K ++K ++ +++ E I + + P VV+
Sbjct: 80 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI-MAFANSPWVVQ 138
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA-IVNAVNVCHSMGVMH 147
++D+ +++VME GGDL + + Y+ A A +V A++ HSMG +H
Sbjct: 139 LFYAFQDDRYLYMVMEYMPGGDLVN--LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH 196
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSAL-LFEEGQVYRDI-VGSGFYIAPEVLRRR---- 201
RD+KP+N D + LK+ DFG+ + + +EG V D VG+ YI+PEVL+ +
Sbjct: 197 RDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDG 253
Query: 202 -YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL--QGEIDFDTDPWPSISSTAKD 258
YG+E D WS GV LY +L G PF+A++ GTY I+ + + F D IS AK+
Sbjct: 254 YYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISKEAKN 311
Query: 259 LVRRMLT 265
L+ LT
Sbjct: 312 LICAFLT 318
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 135/247 (54%), Gaps = 18/247 (7%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++GRG FG L ST + YA K ++K ++ +++ E I + + P VV+
Sbjct: 80 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI-MAFANSPWVVQ 138
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA-IVNAVNVCHSMGVMH 147
++D+ +++VME GGDL + + Y+ A A +V A++ HSMG +H
Sbjct: 139 LFYAFQDDRYLYMVMEYMPGGDLVN--LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH 196
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSAL-LFEEGQVYRDI-VGSGFYIAPEVLRRR---- 201
RD+KP+N D + LK+ DFG+ + + +EG V D VG+ YI+PEVL+ +
Sbjct: 197 RDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDG 253
Query: 202 -YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL--QGEIDFDTDPWPSISSTAKD 258
YG+E D WS GV LY +L G PF+A++ GTY I+ + + F D IS AK+
Sbjct: 254 YYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISKEAKN 311
Query: 259 LVRRMLT 265
L+ LT
Sbjct: 312 LICAFLT 318
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 12/259 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G +G L T A K + K + EN I++EI I L+ + NVV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEIXINKMLNHE-NVVK 68
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
F + ++ +E C GG+LFDRI E DA ++ V H +G+ HR
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR---DIVGSGFYIAPEVLRRR--YG 203
D+KPEN RD+ LK++DFG A +F R + G+ Y+APE+L+RR +
Sbjct: 129 DIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
+ +D+WS G++L +L+G P W + + E +PW I S L+ ++
Sbjct: 186 EPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 264 LTKDPKRRITAAQVLEHPW 282
L ++P RIT + + W
Sbjct: 245 LVENPSARITIPDIKKDRW 263
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 12/259 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G +G L T A K + K + EN I++EI I L+ + NVV+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINAMLNHE-NVVK 69
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
F + ++ +E C GG+LFDRI E DA ++ V H +G+ HR
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR---DIVGSGFYIAPEVLRRR--YG 203
D+KPEN RD+ LK++DFG A +F R + G+ Y+APE+L+RR +
Sbjct: 130 DIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
+ +D+WS G++L +L+G P W + + E +PW I S L+ ++
Sbjct: 187 EPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 245
Query: 264 LTKDPKRRITAAQVLEHPW 282
L ++P RIT + + W
Sbjct: 246 LVENPSARITIPDIKKDRW 264
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 12/259 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G +G L T A K + K + EN I++EI I L+ + NVV+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEIXINKMLNHE-NVVK 69
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
F + ++ +E C GG+LFDRI E DA ++ V H +G+ HR
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR---DIVGSGFYIAPEVLRRR--YG 203
D+KPEN RD+ LK++DFG A +F R + G+ Y+APE+L+RR +
Sbjct: 130 DIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 186
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
+ +D+WS G++L +L+G P W + + E +PW I S L+ ++
Sbjct: 187 EPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 245
Query: 264 LTKDPKRRITAAQVLEHPW 282
L ++P RIT + + W
Sbjct: 246 LVENPSARITIPDIKKDRW 264
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 151/278 (54%), Gaps = 20/278 (7%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR---LAENDMIRREIQIRLYLSGQPNVV 87
+G G G+ + T S+ + A K + + + R L +I R+ Q NVV
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-------HENVV 80
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
E ++Y + VVME EGG L D + N E+ AA L A++ A++V H+ GV+H
Sbjct: 81 EMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCL-AVLQALSVLHAQGVIH 139
Query: 148 RDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKE 205
RD+K ++ ++ D +K++DFG A + +E + +VG+ +++APE++ R YG E
Sbjct: 140 RDIKSDSI-LLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 196
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265
+DIWS G+++ ++ G PP++ E I + + +S + K + R+L
Sbjct: 197 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLV 255
Query: 266 KDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFR 303
+DP +R TAA++L+HP+L ++G + S++ M+Q R
Sbjct: 256 RDPAQRATAAELLKHPFLAKAGPPA---SIVPLMRQNR 290
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 12/259 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G +G L T A K + K + EN I++EI I L+ + NVV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEIXINKMLNHE-NVVK 68
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
F + ++ +E C GG+LFDRI E DA ++ V H +G+ HR
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR---DIVGSGFYIAPEVLRRR--YG 203
D+KPEN RD+ LK++DFG A +F R + G+ Y+APE+L+RR +
Sbjct: 129 DIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
+ +D+WS G++L +L+G P W + + E +PW I S L+ ++
Sbjct: 186 EPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 264 LTKDPKRRITAAQVLEHPW 282
L ++P RIT + + W
Sbjct: 245 LVENPSARITIPDIKKDRW 263
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 12/259 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G +G L T A K + K + EN I++EI I L+ + NVV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHE-NVVK 68
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
F + ++ +E C GG+LFDRI E DA ++ V H +G+ HR
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR---DIVGSGFYIAPEVLRRR--YG 203
D+KPEN RD+ LK++DFG A +F R + G+ Y+APE+L+RR +
Sbjct: 129 DIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
+ +D+WS G++L +L+G P W + + E +PW I S L+ ++
Sbjct: 186 EPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 264 LTKDPKRRITAAQVLEHPW 282
L ++P RIT + + W
Sbjct: 245 LVENPSARITIPDIKKDRW 263
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 12/259 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G +G L T A K + K + EN I++EI I L+ + NVV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHE-NVVK 68
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
F + ++ +E C GG+LFDRI E DA ++ V H +G+ HR
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR---DIVGSGFYIAPEVLRRR--YG 203
D+KPEN RD+ LK++DFG A +F R + G+ Y+APE+L+RR +
Sbjct: 129 DIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
+ +D+WS G++L +L+G P W + + E +PW I S L+ ++
Sbjct: 186 EPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 264 LTKDPKRRITAAQVLEHPW 282
L ++P RIT + + W
Sbjct: 245 LVENPSARITIPDIKKDRW 263
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 12/259 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G +G L T A K + K + EN I++EI I L+ + NVV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHE-NVVK 68
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
F + ++ +E C GG+LFDRI E DA ++ V H +G+ HR
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR---DIVGSGFYIAPEVLRRR--YG 203
D+KPEN RD+ LK++DFG A +F R + G+ Y+APE+L+RR +
Sbjct: 129 DIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
+ +D+WS G++L +L+G P W + + E +PW I S L+ ++
Sbjct: 186 EPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 264 LTKDPKRRITAAQVLEHPW 282
L ++P RIT + + W
Sbjct: 245 LVENPSARITIPDIKKDRW 263
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 151/278 (54%), Gaps = 20/278 (7%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR---LAENDMIRREIQIRLYLSGQPNVV 87
+G G G+ + T S+ + A K + + + R L +I R+ Q NVV
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-------HENVV 84
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
E ++Y + VVME EGG L D + N E+ AA L A++ A++V H+ GV+H
Sbjct: 85 EMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCL-AVLQALSVLHAQGVIH 143
Query: 148 RDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKE 205
RD+K ++ ++ D +K++DFG A + +E + +VG+ +++APE++ R YG E
Sbjct: 144 RDIKSDSI-LLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 200
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265
+DIWS G+++ ++ G PP++ E I + + +S + K + R+L
Sbjct: 201 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLV 259
Query: 266 KDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFR 303
+DP +R TAA++L+HP+L ++G + S++ M+Q R
Sbjct: 260 RDPAQRATAAELLKHPFLAKAGPPA---SIVPLMRQNR 294
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 128/259 (49%), Gaps = 12/259 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G +G L T A K + K + EN I++EI I L+ + NVV+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHE-NVVK 69
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
F + ++ +E C GG+LFDRI E DA ++ V H +G+ HR
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEG---QVYRDIVGSGFYIAPEVLRRR--YG 203
D+KPEN RD+ LK++DFG A +F ++ + G+ Y+APE+L+RR +
Sbjct: 130 DIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
+ +D+WS G++L +L+G P W + + E +PW I S L+ ++
Sbjct: 187 EPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 245
Query: 264 LTKDPKRRITAAQVLEHPW 282
L ++P RIT + + W
Sbjct: 246 LVENPSARITIPDIKKDRW 264
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 12/259 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G +G L T A K + K + EN I++EI I L+ + NVV+
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHE-NVVK 67
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
F + ++ +E C GG+LFDRI E DA ++ V H +G+ HR
Sbjct: 68 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 127
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR---DIVGSGFYIAPEVLRRR--YG 203
D+KPEN RD+ LK++DFG A +F R + G+ Y+APE+L+RR +
Sbjct: 128 DIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 184
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
+ +D+WS G++L +L+G P W + + E +PW I S L+ ++
Sbjct: 185 EPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 243
Query: 264 LTKDPKRRITAAQVLEHPW 282
L ++P RIT + + W
Sbjct: 244 LVENPSARITIPDIKKDRW 262
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 12/259 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G +G L T A K + K + EN I++EI I L+ + NVV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHE-NVVK 68
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
F + ++ +E C GG+LFDRI E DA ++ V H +G+ HR
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR---DIVGSGFYIAPEVLRRR--YG 203
D+KPEN RD+ LK++DFG A +F R + G+ Y+APE+L+RR +
Sbjct: 129 DIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
+ +D+WS G++L +L+G P W + + E +PW I S L+ ++
Sbjct: 186 EPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 264 LTKDPKRRITAAQVLEHPW 282
L ++P RIT + + W
Sbjct: 245 LVENPSARITIPDIKKDRW 263
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 12/259 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G +G L T A K + K + EN I++EI I L+ + NVV+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHE-NVVK 69
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
F + ++ +E C GG+LFDRI E DA ++ V H +G+ HR
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR---DIVGSGFYIAPEVLRRR--YG 203
D+KPEN RD+ LK++DFG A +F R + G+ Y+APE+L+RR +
Sbjct: 130 DIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
+ +D+WS G++L +L+G P W + + E +PW I S L+ ++
Sbjct: 187 EPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 245
Query: 264 LTKDPKRRITAAQVLEHPW 282
L ++P RIT + + W
Sbjct: 246 LVENPSARITIPDIKKDRW 264
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 151/278 (54%), Gaps = 20/278 (7%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR---LAENDMIRREIQIRLYLSGQPNVV 87
+G G G+ + T S+ + A K + + + R L +I R+ Q NVV
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-------HENVV 89
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
E ++Y + VVME EGG L D + N E+ AA L A++ A++V H+ GV+H
Sbjct: 90 EMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCL-AVLQALSVLHAQGVIH 148
Query: 148 RDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKE 205
RD+K ++ ++ D +K++DFG A + +E + +VG+ +++APE++ R YG E
Sbjct: 149 RDIKSDSI-LLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 205
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265
+DIWS G+++ ++ G PP++ E I + + +S + K + R+L
Sbjct: 206 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLV 264
Query: 266 KDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFR 303
+DP +R TAA++L+HP+L ++G + S++ M+Q R
Sbjct: 265 RDPAQRATAAELLKHPFLAKAGPPA---SIVPLMRQNR 299
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 12/259 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G +G L T A K + K + EN I++EI I L+ + NVV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHE-NVVK 68
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
F + ++ +E C GG+LFDRI E DA ++ V H +G+ HR
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR---DIVGSGFYIAPEVLRRR--YG 203
D+KPEN RD+ LK++DFG A +F R + G+ Y+APE+L+RR +
Sbjct: 129 DIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
+ +D+WS G++L +L+G P W + + E +PW I S L+ ++
Sbjct: 186 EPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 264 LTKDPKRRITAAQVLEHPW 282
L ++P RIT + + W
Sbjct: 245 LVENPSARITIPDIKKDRW 263
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 151/278 (54%), Gaps = 20/278 (7%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR---LAENDMIRREIQIRLYLSGQPNVV 87
+G G G+ + T S+ + A K + + + R L +I R+ Q NVV
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-------HENVV 91
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
E ++Y + VVME EGG L D + N E+ AA L A++ A++V H+ GV+H
Sbjct: 92 EMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCL-AVLQALSVLHAQGVIH 150
Query: 148 RDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKE 205
RD+K ++ ++ D +K++DFG A + +E + +VG+ +++APE++ R YG E
Sbjct: 151 RDIKSDSI-LLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 207
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265
+DIWS G+++ ++ G PP++ E I + + +S + K + R+L
Sbjct: 208 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLV 266
Query: 266 KDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFR 303
+DP +R TAA++L+HP+L ++G + S++ M+Q R
Sbjct: 267 RDPAQRATAAELLKHPFLAKAGPPA---SIVPLMRQNR 301
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 12/259 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G +G L T A K + K + EN I++EI I L+ + NVV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHE-NVVK 68
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
F + ++ +E C GG+LFDRI E DA ++ V H +G+ HR
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR---DIVGSGFYIAPEVLRRR--YG 203
D+KPEN RD+ LK++DFG A +F R + G+ Y+APE+L+RR +
Sbjct: 129 DIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
+ +D+WS G++L +L+G P W + + E +PW I S L+ ++
Sbjct: 186 EPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 264 LTKDPKRRITAAQVLEHPW 282
L ++P RIT + + W
Sbjct: 245 LVENPSARITIPDIKKDRW 263
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 12/259 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G +G L T A K + K + EN I++EI I L+ + NVV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHE-NVVK 68
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
F + ++ +E C GG+LFDRI E DA ++ V H +G+ HR
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR---DIVGSGFYIAPEVLRRR--YG 203
D+KPEN RD+ LK++DFG A +F R + G+ Y+APE+L+RR +
Sbjct: 129 DIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
+ +D+WS G++L +L+G P W + + E +PW I S L+ ++
Sbjct: 186 EPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 264 LTKDPKRRITAAQVLEHPW 282
L ++P RIT + + W
Sbjct: 245 LVENPSARITIPDIKKDRW 263
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 12/259 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G +G L T A K + K + EN I++EI I L+ + NVV+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHE-NVVK 69
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
F + ++ +E C GG+LFDRI E DA ++ V H +G+ HR
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR---DIVGSGFYIAPEVLRRR--YG 203
D+KPEN RD+ LK++DFG A +F R + G+ Y+APE+L+RR +
Sbjct: 130 DIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
+ +D+WS G++L +L+G P W + + E +PW I S L+ ++
Sbjct: 187 EPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 245
Query: 264 LTKDPKRRITAAQVLEHPW 282
L ++P RIT + + W
Sbjct: 246 LVENPSARITIPDIKKDRW 264
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 12/259 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G +G L T A K + K + EN I++EI I L+ + NVV+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHE-NVVK 69
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
F + ++ +E C GG+LFDRI E DA ++ V H +G+ HR
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR---DIVGSGFYIAPEVLRRR--YG 203
D+KPEN RD+ LK++DFG A +F R + G+ Y+APE+L+RR +
Sbjct: 130 DIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
+ +D+WS G++L +L+G P W + + E +PW I S L+ ++
Sbjct: 187 EPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 245
Query: 264 LTKDPKRRITAAQVLEHPW 282
L ++P RIT + + W
Sbjct: 246 LVENPSARITIPDIKKDRW 264
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 12/259 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G +G L T A K + K + EN I++EI I L+ + NVV+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHE-NVVK 69
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
F + ++ +E C GG+LFDRI E DA ++ V H +G+ HR
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR---DIVGSGFYIAPEVLRRR--YG 203
D+KPEN RD+ LK++DFG A +F R + G+ Y+APE+L+RR +
Sbjct: 130 DIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
+ +D+WS G++L +L+G P W + + E +PW I S L+ ++
Sbjct: 187 EPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 245
Query: 264 LTKDPKRRITAAQVLEHPW 282
L ++P RIT + + W
Sbjct: 246 LVENPSARITIPDIKKDRW 264
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 12/259 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G +G L T A K + K + EN I++EI I L+ + NVV+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHE-NVVK 69
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
F + ++ +E C GG+LFDRI E DA ++ V H +G+ HR
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR---DIVGSGFYIAPEVLRRR--YG 203
D+KPEN RD+ LK++DFG A +F R + G+ Y+APE+L+RR +
Sbjct: 130 DIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
+ +D+WS G++L +L+G P W + + E +PW I S L+ ++
Sbjct: 187 EPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 245
Query: 264 LTKDPKRRITAAQVLEHPW 282
L ++P RIT + + W
Sbjct: 246 LVENPSARITIPDIKKDRW 264
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 12/259 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G +G L T A K + K + EN I++EI I L+ + NVV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHE-NVVK 68
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
F + ++ +E C GG+LFDRI E DA ++ V H +G+ HR
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR---DIVGSGFYIAPEVLRRR--YG 203
D+KPEN RD+ LK++DFG A +F R + G+ Y+APE+L+RR +
Sbjct: 129 DIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
+ +D+WS G++L +L+G P W + + E +PW I S L+ ++
Sbjct: 186 EPVDVWSCGIVLTAMLAGELP-WDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 264 LTKDPKRRITAAQVLEHPW 282
L ++P RIT + + W
Sbjct: 245 LVENPSARITIPDIKKDRW 263
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L T YA K + K+ ++L E + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPE-VLRRRYGKEID 207
DLKPEN D +KVTDFG A +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLMI---DQQGYIKVTDFGLAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L T YA K + K+ ++L + + E +I L P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 106
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPE-VLRRRYGKEID 207
DLKPEN D +KVTDFG A +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 167 DLKPENLMI---DQQGYIKVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 268 PKRRI 272
+R
Sbjct: 278 LTKRF 282
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 12/259 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G +G L T A K + K + EN I++EI I L+ + NVV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHE-NVVK 68
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
F + ++ +E C GG+LFDRI E DA ++ V H +G+ HR
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR---DIVGSGFYIAPEVLRRR--YG 203
D+KPEN RD+ LK++DFG A +F R + G+ Y+APE+L+RR +
Sbjct: 129 DIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
+ +D+WS G++L +L+G P W + + E +PW I S L+ ++
Sbjct: 186 EPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 264 LTKDPKRRITAAQVLEHPW 282
L ++P RIT + + W
Sbjct: 245 LVENPSARITIPDIKKDRW 263
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 151/278 (54%), Gaps = 20/278 (7%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR---LAENDMIRREIQIRLYLSGQPNVV 87
+G G G+ + T S+ + A K + + + R L +I R+ Q NVV
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-------HENVV 134
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
E ++Y + VVME EGG L D + N E+ AA L A++ A++V H+ GV+H
Sbjct: 135 EMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCL-AVLQALSVLHAQGVIH 193
Query: 148 RDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKE 205
RD+K ++ ++ D +K++DFG A + +E + +VG+ +++APE++ R YG E
Sbjct: 194 RDIKSDSI-LLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 250
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265
+DIWS G+++ ++ G PP++ E I + + +S + K + R+L
Sbjct: 251 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLV 309
Query: 266 KDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFR 303
+DP +R TAA++L+HP+L ++G + S++ M+Q R
Sbjct: 310 RDPAQRATAAELLKHPFLAKAGPPA---SIVPLMRQNR 344
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 151/278 (54%), Gaps = 20/278 (7%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR---LAENDMIRREIQIRLYLSGQPNVV 87
+G G G+ + T S+ + A K + + + R L +I R+ Q NVV
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-------HENVV 211
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
E ++Y + VVME EGG L D + N E+ AA L A++ A++V H+ GV+H
Sbjct: 212 EMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCL-AVLQALSVLHAQGVIH 270
Query: 148 RDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKE 205
RD+K ++ ++ D +K++DFG A + +E + +VG+ +++APE++ R YG E
Sbjct: 271 RDIKSDSI-LLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 327
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265
+DIWS G+++ ++ G PP++ E I + + +S + K + R+L
Sbjct: 328 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLV 386
Query: 266 KDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFR 303
+DP +R TAA++L+HP+L ++G + S++ M+Q R
Sbjct: 387 RDPAQRATAAELLKHPFLAKAGPPA---SIVPLMRQNR 421
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L T YA K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPE-VLRRRYGKEID 207
DLKPEN D +KVTDFG A +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLMI---DQQGYIKVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 139/254 (54%), Gaps = 14/254 (5%)
Query: 29 RMLGRGQFGVSYLCTENS---TNRPYACKSIAKKPKMRLAEN-DMIRREIQIRLYLSGQP 84
++LG G +G +L + S T + YA K + K ++ A+ + R E Q+ ++ P
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
+V ++ ET +H++++ GG+LF + + +E + + IV A+ H +G
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLG 179
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR--DIVGSGFYIAPEVLR--- 199
+++RD+K EN I D N + +TDFG + F + R D G+ Y+AP+++R
Sbjct: 180 IIYRDIKLEN---ILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGD 236
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS-ISSTAKD 258
+ K +D WS GV++Y LL+G PF + +K + A + I P+P +S+ AKD
Sbjct: 237 SGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QAEISRRILKSEPPYPQEMSALAKD 295
Query: 259 LVRRMLTKDPKRRI 272
L++R+L KDPK+R+
Sbjct: 296 LIQRLLMKDPKKRL 309
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L T YA K + K+ ++L E + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPE-VLRRRYGKEID 207
DLKPEN D ++VTDFG A +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLMI---DQQGYIQVTDFGLAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 133/261 (50%), Gaps = 16/261 (6%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L T YA K + K+ ++L + + E +I L P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 106
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 268 PKRRITAAQ-----VLEHPWL 283
+R + + H W
Sbjct: 278 LTKRFGNLKNGVNDIXNHKWF 298
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G G L T A K + K + EN I++EI I L+ + NVV+
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLNHE-NVVK 68
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
F + ++ +E C GG+LFDRI E DA ++ V H +G+ HR
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR---DIVGSGFYIAPEVLRRR--YG 203
D+KPEN RD+ LK++DFG A +F R + G+ Y+APE+L+RR +
Sbjct: 129 DIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
+ +D+WS G++L +L+G P W + + E +PW I S L+ ++
Sbjct: 186 EPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 264 LTKDPKRRITAAQVLEHPW 282
L ++P RIT + + W
Sbjct: 245 LVENPSARITIPDIKKDRW 263
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L T YA K + K+ ++L + + E +I L P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 106
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 268 PKRRI 272
+R
Sbjct: 278 LTKRF 282
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L T YA K + K+ ++L + + E +I L P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 106
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 268 PKRRI 272
+R
Sbjct: 278 LTKRF 282
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L T YA K + K+ ++L + + E +I L P +V+
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 98
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 158
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 159 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 213
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 214 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 269
Query: 268 PKRRI 272
+R
Sbjct: 270 LTKRF 274
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L T YA K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPE-VLRRRYGKEID 207
DLKPEN D ++VTDFG A +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLMI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L T YA K + K+ ++L + + E +I L P +V+
Sbjct: 68 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 126
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 127 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 187 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 241
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 242 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 297
Query: 268 PKRRI 272
+R
Sbjct: 298 LTKRF 302
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 128/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L T YA K + K+ ++L + + E +I L P + +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLTK 106
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D +KVTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 167 DLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 268 PKRRI 272
+R
Sbjct: 278 LTKRF 282
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 130/245 (53%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R LG G FG L T YA K + K+ ++L + + E +I+ ++ P +V+
Sbjct: 48 RTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF-PFLVK 106
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++V+E GG++F + G SE A IV HS+ +++R
Sbjct: 107 LEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D +KV DFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 167 DLKPENLLI---DQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 268 PKRRI 272
+R
Sbjct: 278 LTKRF 282
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 130/245 (53%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L + YA K + K+ ++L + + E +I L P +V+
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 92
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 93 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 152
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D+ ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 153 DLKPENLLI---DEQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 207
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 208 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 263
Query: 268 PKRRI 272
+R
Sbjct: 264 LTKRF 268
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 133/250 (53%), Gaps = 12/250 (4%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
FG++LG G F + L E +T+R YA K + K+ ++ + + RE + L P
Sbjct: 34 FGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFF 92
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V+ T++D+ ++ + + G+L I G E IV+A+ H G++
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 152
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYR--DIVGSGFYIAPEVLRRRYG 203
HRDLKPEN I +++ +++TDFG+A +L E + R VG+ Y++PE+L +
Sbjct: 153 HRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 204 -KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
K D+W+ G I+Y L++G+PPF A + + I++ E DF +P A+DLV +
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEK 265
Query: 263 MLTKDPKRRI 272
+L D +R+
Sbjct: 266 LLVLDATKRL 275
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 128/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L T YA K + K+ ++L + + E +I L P + +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLTK 106
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D +KVTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 167 DLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 268 PKRRI 272
+R
Sbjct: 278 LTKRF 282
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L T YA K + K+ ++L + + E +I L P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 106
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 268 PKRRI 272
+R
Sbjct: 278 LTKRF 282
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 148/276 (53%), Gaps = 16/276 (5%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQI-RLYLSGQPNVVEF 89
+G G G+ + TE T + A K + + + R +++ E+ I R Y NVV+
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQR---RELLFNEVVIMRDY--HHDNVVDM 107
Query: 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRD 149
S+Y + VVME EGG L D I+ +E ATV +++ A++ H+ GV+HRD
Sbjct: 108 YSSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRD 166
Query: 150 LKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEID 207
+K ++ S + +K++DFG A + +E + +VG+ +++APEV+ R YG E+D
Sbjct: 167 IKSDSILLTS---DGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVD 223
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
IWS G+++ ++ G PP++ E I + + +SS + + ML ++
Sbjct: 224 IWSLGIMVIEMIDGEPPYFNEPPLQAMRRI-RDSLPPRVKDLHKVSSVLRGFLDLMLVRE 282
Query: 268 PKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFR 303
P +R TA ++L HP+L+ +G S ++ M+Q+R
Sbjct: 283 PSQRATAQELLGHPFLKLAGPPS---CIVPLMRQYR 315
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 132/250 (52%), Gaps = 12/250 (4%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
FG++LG G F L E +T+R YA K + K+ ++ + + RE + L P
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFF 91
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V+ T++D+ ++ + + G+L I G E IV+A+ H G++
Sbjct: 92 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 151
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYR--DIVGSGFYIAPEVLRRRYG 203
HRDLKPEN I +++ +++TDFG+A +L E + R VG+ Y++PE+L +
Sbjct: 152 HRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 208
Query: 204 -KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
K D+W+ G I+Y L++G+PPF A + + I++ E DF +P A+DLV +
Sbjct: 209 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEK 264
Query: 263 MLTKDPKRRI 272
+L D +R+
Sbjct: 265 LLVLDATKRL 274
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L T YA K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L T YA K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L T YA K + K+ ++L + + E +I L P +V+
Sbjct: 33 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 91
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 92 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 151
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 152 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTW-TLCGTPEYLAPEIILSKGYNKAVD 206
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 207 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 262
Query: 268 PKRRI 272
+R
Sbjct: 263 LTKRF 267
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L T YA K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L T YA K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L T YA K + K+ ++L + + E +I L P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 106
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTW-TLCGTPEYLAPEIILSKGYNKAVD 221
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 268 PKRRI 272
+R
Sbjct: 278 LTKRF 282
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L + YA K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 128/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ +G G FG L T YA K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GGD+F + G SE A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPE-VLRRRYGKEID 207
DLKPEN D +KV DFG A +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIKVADFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L + YA K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LAGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 128/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ +G G FG L T YA K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GGD+F + G SE A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPE-VLRRRYGKEID 207
DLKPEN D +KV DFG A +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIKVADFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 133/261 (50%), Gaps = 16/261 (6%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L + YA K + K+ ++L + + E +I L P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 106
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 268 PKRRITAAQ-----VLEHPWL 283
+R + + H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 128/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L T YA K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G E A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D +KVTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 132/250 (52%), Gaps = 12/250 (4%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
FG++LG G F L E +T+R YA K + K+ ++ + + RE + L P
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFF 91
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V+ T++D+ ++ + + G+L I G E IV+A+ H G++
Sbjct: 92 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 151
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYR--DIVGSGFYIAPEVLRRRYG 203
HRDLKPEN I +++ +++TDFG+A +L E + R VG+ Y++PE+L +
Sbjct: 152 HRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 208
Query: 204 -KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
K D+W+ G I+Y L++G+PPF A + + I++ E DF +P A+DLV +
Sbjct: 209 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEK 264
Query: 263 MLTKDPKRRI 272
+L D +R+
Sbjct: 265 LLVLDATKRL 274
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L + YA K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L + YA K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LXGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L T +A K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L + YA K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 142/268 (52%), Gaps = 29/268 (10%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR---LAENDMIRREIQIRLYLSGQPNVV 87
+G G G+ L E + R A K + + + R L +I R+ Q NVV
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ-------HFNVV 105
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
E +Y + V+ME +GG L D I+++ +E ATV A++ A+ H+ GV+H
Sbjct: 106 EMYKSYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIH 164
Query: 148 RDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKE 205
RD+K ++ ++ D +K++DFG A + ++ + +VG+ +++APEV+ R Y E
Sbjct: 165 RDIKSDSI-LLTLDGR--VKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATE 221
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS------ISSTAKDL 259
+DIWS G+++ ++ G PP+++ D+ +Q P P +S +D
Sbjct: 222 VDIWSLGIMVIEMVDGEPPYFS-------DSPVQAMKRLRDSPPPKLKNSHKVSPVLRDF 274
Query: 260 VRRMLTKDPKRRITAAQVLEHPWLRESG 287
+ RML +DP+ R TA ++L+HP+L ++G
Sbjct: 275 LERMLVRDPQERATAQELLDHPFLLQTG 302
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L T +A K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L T +A K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 132/250 (52%), Gaps = 12/250 (4%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
FG++LG G F L E +T+R YA K + K+ ++ + + RE + L P
Sbjct: 18 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFF 76
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V+ T++D+ ++ + + G+L I G E IV+A+ H G++
Sbjct: 77 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 136
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYR--DIVGSGFYIAPEVLRRRYG 203
HRDLKPEN I +++ +++TDFG+A +L E + R VG+ Y++PE+L +
Sbjct: 137 HRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 193
Query: 204 -KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
K D+W+ G I+Y L++G+PPF A + + I++ E DF +P A+DLV +
Sbjct: 194 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEK 249
Query: 263 MLTKDPKRRI 272
+L D +R+
Sbjct: 250 LLVLDATKRL 259
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L + YA K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L + YA K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 134/255 (52%), Gaps = 12/255 (4%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
FG++LG G F L E +T+R YA K + K+ ++ + + RE + L P
Sbjct: 11 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFF 69
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V+ T++D+ ++ + + G+L I G E IV+A+ H G++
Sbjct: 70 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 129
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYR--DIVGSGFYIAPEVLRRRYG 203
HRDLKPEN I +++ +++TDFG+A +L E + R VG+ Y++PE+L +
Sbjct: 130 HRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 186
Query: 204 -KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
K D+W+ G I+Y L++G+PPF A + + I++ E DF +P A+DLV +
Sbjct: 187 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEK 242
Query: 263 MLTKDPKRRITAAQV 277
+L D +R+ ++
Sbjct: 243 LLVLDATKRLGCEEM 257
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 132/250 (52%), Gaps = 12/250 (4%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
FG++LG G F L E +T+R YA K + K+ ++ + + RE + L P
Sbjct: 37 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFF 95
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V+ T++D+ ++ + + G+L I G E IV+A+ H G++
Sbjct: 96 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 155
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYR--DIVGSGFYIAPEVLRRRYG 203
HRDLKPEN I +++ +++TDFG+A +L E + R VG+ Y++PE+L +
Sbjct: 156 HRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 212
Query: 204 -KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
K D+W+ G I+Y L++G+PPF A + + I++ E DF +P A+DLV +
Sbjct: 213 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEK 268
Query: 263 MLTKDPKRRI 272
+L D +R+
Sbjct: 269 LLVLDATKRL 278
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 132/250 (52%), Gaps = 12/250 (4%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
FG++LG G F L E +T+R YA K + K+ ++ + + RE + L P
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFF 92
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V+ T++D+ ++ + + G+L I G E IV+A+ H G++
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 152
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYR--DIVGSGFYIAPEVLRRRYG 203
HRDLKPEN I +++ +++TDFG+A +L E + R VG+ Y++PE+L +
Sbjct: 153 HRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 204 -KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
K D+W+ G I+Y L++G+PPF A + + I++ E DF +P A+DLV +
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEK 265
Query: 263 MLTKDPKRRI 272
+L D +R+
Sbjct: 266 LLVLDATKRL 275
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 134/255 (52%), Gaps = 12/255 (4%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
FG++LG G F L E +T+R YA K + K+ ++ + + RE + L P
Sbjct: 12 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFF 70
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V+ T++D+ ++ + + G+L I G E IV+A+ H G++
Sbjct: 71 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 130
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYR--DIVGSGFYIAPEVLRRRYG 203
HRDLKPEN I +++ +++TDFG+A +L E + R VG+ Y++PE+L +
Sbjct: 131 HRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 187
Query: 204 -KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
K D+W+ G I+Y L++G+PPF A + + I++ E DF +P A+DLV +
Sbjct: 188 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEK 243
Query: 263 MLTKDPKRRITAAQV 277
+L D +R+ ++
Sbjct: 244 LLVLDATKRLGCEEM 258
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 132/250 (52%), Gaps = 12/250 (4%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
FG++LG G F L E +T+R YA K + K+ ++ + + RE + L P
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFF 94
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V+ T++D+ ++ + + G+L I G E IV+A+ H G++
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 154
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYR--DIVGSGFYIAPEVLRRRYG 203
HRDLKPEN I +++ +++TDFG+A +L E + R VG+ Y++PE+L +
Sbjct: 155 HRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 204 -KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
K D+W+ G I+Y L++G+PPF A + + I++ E DF +P A+DLV +
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEK 267
Query: 263 MLTKDPKRRI 272
+L D +R+
Sbjct: 268 LLVLDATKRL 277
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 132/250 (52%), Gaps = 12/250 (4%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
FG++LG G F L E +T+R YA K + K+ ++ + + RE + L P
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFF 92
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V+ T++D+ ++ + + G+L I G E IV+A+ H G++
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 152
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYR--DIVGSGFYIAPEVLRRRYG 203
HRDLKPEN I +++ +++TDFG+A +L E + R VG+ Y++PE+L +
Sbjct: 153 HRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 204 -KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
K D+W+ G I+Y L++G+PPF A + + I++ E DF +P A+DLV +
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEK 265
Query: 263 MLTKDPKRRI 272
+L D +R+
Sbjct: 266 LLVLDATKRL 275
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 128/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L T YA K + K+ ++L + + E +I L P +V+
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 98
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G E A IV HS+ +++R
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 158
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 159 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 213
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 214 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 269
Query: 268 PKRRI 272
+R
Sbjct: 270 LTKRF 274
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 132/250 (52%), Gaps = 12/250 (4%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
FG++LG G F L E +T+R YA K + K+ ++ + + RE + L P
Sbjct: 39 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFF 97
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V+ T++D+ ++ + + G+L I G E IV+A+ H G++
Sbjct: 98 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 157
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYR--DIVGSGFYIAPEVLRRRYG 203
HRDLKPEN I +++ +++TDFG+A +L E + R VG+ Y++PE+L +
Sbjct: 158 HRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 214
Query: 204 -KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
K D+W+ G I+Y L++G+PPF A + + I++ E DF +P A+DLV +
Sbjct: 215 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPK----ARDLVEK 270
Query: 263 MLTKDPKRRI 272
+L D +R+
Sbjct: 271 LLVLDATKRL 280
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 132/250 (52%), Gaps = 12/250 (4%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
FG++LG G F L E +T+R YA K + K+ ++ + + RE + L P
Sbjct: 13 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFF 71
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V+ T++D+ ++ + + G+L I G E IV+A+ H G++
Sbjct: 72 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 131
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYR--DIVGSGFYIAPEVLRRRYG 203
HRDLKPEN I +++ +++TDFG+A +L E + R VG+ Y++PE+L +
Sbjct: 132 HRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 188
Query: 204 -KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
K D+W+ G I+Y L++G+PPF A + + I++ E DF +P A+DLV +
Sbjct: 189 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEK 244
Query: 263 MLTKDPKRRI 272
+L D +R+
Sbjct: 245 LLVLDATKRL 254
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 132/250 (52%), Gaps = 12/250 (4%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
FG++LG G F L E +T+R YA K + K+ ++ + + RE + L P
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFF 94
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V+ T++D+ ++ + + G+L I G E IV+A+ H G++
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 154
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYR--DIVGSGFYIAPEVLRRRYG 203
HRDLKPEN I +++ +++TDFG+A +L E + R VG+ Y++PE+L +
Sbjct: 155 HRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 204 -KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
K D+W+ G I+Y L++G+PPF A + + I++ E DF +P A+DLV +
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEK 267
Query: 263 MLTKDPKRRI 272
+L D +R+
Sbjct: 268 LLVLDATKRL 277
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 132/250 (52%), Gaps = 12/250 (4%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
FG++LG G F L E +T+R YA K + K+ ++ + + RE + L P
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFF 92
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V+ T++D+ ++ + + G+L I G E IV+A+ H G++
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 152
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYR--DIVGSGFYIAPEVLRRRYG 203
HRDLKPEN I +++ +++TDFG+A +L E + R VG+ Y++PE+L +
Sbjct: 153 HRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSA 209
Query: 204 -KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
K D+W+ G I+Y L++G+PPF A + + I++ E DF +P A+DLV +
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEK 265
Query: 263 MLTKDPKRRI 272
+L D +R+
Sbjct: 266 LLVLDATKRL 275
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 132/250 (52%), Gaps = 12/250 (4%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
FG++LG G F L E +T+R YA K + K+ ++ + + RE + L P
Sbjct: 14 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFF 72
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V+ T++D+ ++ + + G+L I G E IV+A+ H G++
Sbjct: 73 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 132
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYR--DIVGSGFYIAPEVLRRRYG 203
HRDLKPEN I +++ +++TDFG+A +L E + R VG+ Y++PE+L +
Sbjct: 133 HRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 189
Query: 204 -KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
K D+W+ G I+Y L++G+PPF A + + I++ E DF +P A+DLV +
Sbjct: 190 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEK 245
Query: 263 MLTKDPKRRI 272
+L D +R+
Sbjct: 246 LLVLDATKRL 255
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 132/250 (52%), Gaps = 12/250 (4%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
FG++LG G F L E +T+R YA K + K+ ++ + + RE + L P
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFF 94
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V+ T++D+ ++ + + G+L I G E IV+A+ H G++
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 154
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYR--DIVGSGFYIAPEVLRRRYG 203
HRDLKPEN I +++ +++TDFG+A +L E + R VG+ Y++PE+L +
Sbjct: 155 HRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 204 -KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
K D+W+ G I+Y L++G+PPF A + + I++ E DF +P A+DLV +
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEK 267
Query: 263 MLTKDPKRRI 272
+L D +R+
Sbjct: 268 LLVLDATKRL 277
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 132/250 (52%), Gaps = 12/250 (4%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
FG++LG G F L E +T+R YA K + K+ ++ + + RE + L P
Sbjct: 37 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFF 95
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V+ T++D+ ++ + + G+L I G E IV+A+ H G++
Sbjct: 96 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 155
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYR--DIVGSGFYIAPEVLRRRYG 203
HRDLKPEN I +++ +++TDFG+A +L E + R VG+ Y++PE+L +
Sbjct: 156 HRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 212
Query: 204 -KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
K D+W+ G I+Y L++G+PPF A + + I++ E DF +P A+DLV +
Sbjct: 213 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEK 268
Query: 263 MLTKDPKRRI 272
+L D +R+
Sbjct: 269 LLVLDATKRL 278
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 128/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L + YA K + K+ ++L + + E +I L P +V+
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 126
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G + + G+ Y+APE+ L + Y K +D
Sbjct: 187 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GATW-TLCGTPEYLAPEIILSKGYNKAVD 241
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 242 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 297
Query: 268 PKRRI 272
+R
Sbjct: 298 LTKRF 302
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 127/245 (51%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L T YA K + K+ ++L + + E +I L P + +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLTK 106
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G E A IV HS+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D +KVTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 167 DLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 268 PKRRI 272
+R
Sbjct: 278 LTKRF 282
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 128/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ +G G FG L T YA K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D +KV DFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 132/250 (52%), Gaps = 12/250 (4%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
FG++LG G F L E +T+R YA K + K+ ++ + + RE + L P
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFF 94
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V+ T++D+ ++ + + G+L I G E IV+A+ H G++
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 154
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYR--DIVGSGFYIAPEVLRRRYG 203
HRDLKPEN I +++ +++TDFG+A +L E + R VG+ Y++PE+L +
Sbjct: 155 HRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 204 -KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
K D+W+ G I+Y L++G+PPF A + + I++ E DF +P A+DLV +
Sbjct: 212 XKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPK----ARDLVEK 267
Query: 263 MLTKDPKRRI 272
+L D +R+
Sbjct: 268 LLVLDATKRL 277
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L + YA K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G +E A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L + YA K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPE-VLRRRYGKEID 207
DLKPEN D ++VTDFG A +G+ + + G+ Y+APE ++ + Y K +D
Sbjct: 166 DLKPENLII---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIIISKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 128/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L T YA K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G E A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 128/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L T YA K + K+ ++L + + E +I L P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 106
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G E A IV HS+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 268 PKRRI 272
+R
Sbjct: 278 LTKRF 282
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 132/250 (52%), Gaps = 12/250 (4%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
FG++LG G F L E +T+R YA K + K+ ++ + + RE + L P
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFF 94
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V+ T++D+ ++ + + G+L I G E IV+A+ H G++
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 154
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYR--DIVGSGFYIAPEVLRRRYG 203
HRDLKPEN I +++ +++TDFG+A +L E + R VG+ Y++PE+L +
Sbjct: 155 HRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 204 -KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
K D+W+ G I+Y L++G+PPF A + + I++ E DF +P A+DLV +
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPK----ARDLVEK 267
Query: 263 MLTKDPKRRI 272
+L D +R+
Sbjct: 268 LLVLDATKRL 277
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 128/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L T YA K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G E A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 138/267 (51%), Gaps = 17/267 (6%)
Query: 29 RMLGRGQFGVSYLC---TENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
R+LG+G +G + T +T + +A K + K +R A++ + + L P
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
+V+ ++ +++++E GG+LF ++ +G E A L I A+ H G+
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGI 142
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YG 203
++RDLKPEN I + +K+TDFG +G V G+ Y+APE+L R +
Sbjct: 143 IYRDLKPEN---IMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHN 199
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
+ +D WS G ++Y +L+G PPF E +K T D IL+ +++ P ++ A+DL++++
Sbjct: 200 RAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKKL 255
Query: 264 LTKDPKRRIT-----AAQVLEHPWLRE 285
L ++ R+ A +V HP+ R
Sbjct: 256 LKRNAASRLGAGPGDAGEVQAHPFFRH 282
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 128/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L + YA K + K+ ++L + + E +I L P +V+
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 100
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G E A IV HS+ +++R
Sbjct: 101 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 160
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 161 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 215
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 216 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 271
Query: 268 PKRRI 272
+R
Sbjct: 272 LTKRF 276
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 127/240 (52%), Gaps = 11/240 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L + YA K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 138/267 (51%), Gaps = 17/267 (6%)
Query: 29 RMLGRGQFGVSYLC---TENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
R+LG+G +G + T +T + +A K + K +R A++ + + L P
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
+V+ ++ +++++E GG+LF ++ +G E A L I A+ H G+
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGI 142
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YG 203
++RDLKPEN I + +K+TDFG +G V G+ Y+APE+L R +
Sbjct: 143 IYRDLKPEN---IMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHN 199
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
+ +D WS G ++Y +L+G PPF E +K T D IL+ +++ P ++ A+DL++++
Sbjct: 200 RAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKKL 255
Query: 264 LTKDPKRRIT-----AAQVLEHPWLRE 285
L ++ R+ A +V HP+ R
Sbjct: 256 LKRNAASRLGAGPGDAGEVQAHPFFRH 282
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 128/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L + YA K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G E A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 128/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L + YA K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G E A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 126/251 (50%), Gaps = 10/251 (3%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89
LG+G F + ++ T +A K + K ++ + + + EI I L+ Q +VV F
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGF 82
Query: 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRD 149
+ED V VV+ELC L + + +E +A LR IV H V+HRD
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 150 LKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLRRR-YGKEID 207
LK N F++ D +K+ DFG A E +G+ + + G+ YIAPEVL ++ + E+D
Sbjct: 143 LKLGNL-FLNEDLE--VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVD 199
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
+WS G I+Y LL G PPF K TY I + E I+ A L+++ML D
Sbjct: 200 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTD 255
Query: 268 PKRRITAAQVL 278
P R T ++L
Sbjct: 256 PTARPTINELL 266
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 128/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L + YA K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G E A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 128/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L + YA K + K+ ++L + + E +I L P +V+
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 126
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G E A IV HS+ +++R
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 187 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 241
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 242 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 297
Query: 268 PKRRI 272
+R
Sbjct: 298 LTKRF 302
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 126/251 (50%), Gaps = 10/251 (3%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89
LG+G F + ++ T +A K + K ++ + + + EI I L+ Q +VV F
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGF 82
Query: 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRD 149
+ED V VV+ELC L + + +E +A LR IV H V+HRD
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 150 LKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLRRR-YGKEID 207
LK N F++ D +K+ DFG A E +G+ + + G+ YIAPEVL ++ + E+D
Sbjct: 143 LKLGNL-FLNEDLE--VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVD 199
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
+WS G I+Y LL G PPF K TY I + E I+ A L+++ML D
Sbjct: 200 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTD 255
Query: 268 PKRRITAAQVL 278
P R T ++L
Sbjct: 256 PTARPTINELL 266
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 131/250 (52%), Gaps = 12/250 (4%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
FG++LG G F L E +T+R YA K + K+ ++ + + RE + L P
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFF 94
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V+ T++D+ ++ + + G L I G E IV+A+ H G++
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 154
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYR--DIVGSGFYIAPEVLRRRYG 203
HRDLKPEN I +++ +++TDFG+A +L E + R VG+ Y++PE+L +
Sbjct: 155 HRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 211
Query: 204 -KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
K D+W+ G I+Y L++G+PPF A + + I++ E DF +P A+DLV +
Sbjct: 212 SKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEK 267
Query: 263 MLTKDPKRRI 272
+L D +R+
Sbjct: 268 LLVLDATKRL 277
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 126/251 (50%), Gaps = 10/251 (3%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89
LG+G F + ++ T +A K + K ++ + + + EI I L+ Q +VV F
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGF 86
Query: 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRD 149
+ED V VV+ELC L + + +E +A LR IV H V+HRD
Sbjct: 87 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 146
Query: 150 LKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLRRR-YGKEID 207
LK N F++ D +K+ DFG A E +G+ + + G+ YIAPEVL ++ + E+D
Sbjct: 147 LKLGNL-FLNEDLE--VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVD 203
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
+WS G I+Y LL G PPF K TY I + E I+ A L+++ML D
Sbjct: 204 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTD 259
Query: 268 PKRRITAAQVL 278
P R T ++L
Sbjct: 260 PTARPTINELL 270
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 128/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L + YA K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ Y+AP + L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPAIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 126/251 (50%), Gaps = 10/251 (3%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89
LG+G F + ++ T +A K + K ++ + + + EI I L+ Q +VV F
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGF 104
Query: 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRD 149
+ED V VV+ELC L + + +E +A LR IV H V+HRD
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 164
Query: 150 LKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLRRR-YGKEID 207
LK N F++ D +K+ DFG A E +G+ + + G+ YIAPEVL ++ + E+D
Sbjct: 165 LKLGNL-FLNEDLE--VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVD 221
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
+WS G I+Y LL G PPF K TY I + E I+ A L+++ML D
Sbjct: 222 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTD 277
Query: 268 PKRRITAAQVL 278
P R T ++L
Sbjct: 278 PTARPTINELL 288
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 133/255 (52%), Gaps = 12/255 (4%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
FG++LG G F L E +T+R YA K + K+ ++ + + RE + L P
Sbjct: 41 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFF 99
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V+ ++D+ ++ + + G+L I G E IV+A+ H G++
Sbjct: 100 VKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 159
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYR--DIVGSGFYIAPEVLRRRYG 203
HRDLKPEN I +++ +++TDFG+A +L E + R VG+ Y++PE+L +
Sbjct: 160 HRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 216
Query: 204 -KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
K D+W+ G I+Y L++G+PPF A + + I++ E DF +P A+DLV +
Sbjct: 217 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEK 272
Query: 263 MLTKDPKRRITAAQV 277
+L D +R+ ++
Sbjct: 273 LLVLDATKRLGCEEM 287
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 126/251 (50%), Gaps = 10/251 (3%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89
LG+G F + ++ T +A K + K ++ + + + EI I L+ Q +VV F
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGF 106
Query: 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRD 149
+ED V VV+ELC L + + +E +A LR IV H V+HRD
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 166
Query: 150 LKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLRRR-YGKEID 207
LK N F++ D +K+ DFG A E +G+ + + G+ YIAPEVL ++ + E+D
Sbjct: 167 LKLGNL-FLNEDLE--VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVD 223
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
+WS G I+Y LL G PPF K TY I + E I+ A L+++ML D
Sbjct: 224 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTD 279
Query: 268 PKRRITAAQVL 278
P R T ++L
Sbjct: 280 PTARPTINELL 290
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 126/251 (50%), Gaps = 10/251 (3%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89
LG+G F + ++ T +A K + K ++ + + + EI I L+ Q +VV F
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGF 80
Query: 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRD 149
+ED V VV+ELC L + + +E +A LR IV H V+HRD
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 140
Query: 150 LKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLRRR-YGKEID 207
LK N F++ D +K+ DFG A E +G+ + + G+ YIAPEVL ++ + E+D
Sbjct: 141 LKLGNL-FLNEDLE--VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVD 197
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
+WS G I+Y LL G PPF K TY I + E I+ A L+++ML D
Sbjct: 198 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTD 253
Query: 268 PKRRITAAQVL 278
P R T ++L
Sbjct: 254 PTARPTINELL 264
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 128/245 (52%), Gaps = 11/245 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L + YA K + K+ ++L + + E +I L P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFLVK 105
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +++D + +++VME GG++F + G SE A IV HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEID 207
DLKPEN D ++VTDFG A + G+ + + G+ +APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEALAPEIILSKGYNKAVD 220
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
W+ GV++Y + +G PPF+A+ Y+ I+ G++ F + SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 268 PKRRI 272
+R
Sbjct: 277 LTKRF 281
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 134/260 (51%), Gaps = 17/260 (6%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR-LYLSGQPNVV 87
++LG+G FG L E +T R YA K + K+ + +A++++ + R L + P +
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKE--VIIAKDEVAHTVTESRVLQNTRHPFLT 73
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
K ++ + VME GG+LF + + +E A IV+A+ HS V++
Sbjct: 74 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVY 133
Query: 148 RDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKE 205
RD+K EN D + +K+TDFG +G + G+ Y+APEVL YG+
Sbjct: 134 RDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRA 190
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265
+D W GV++Y ++ G PF+ + + ++ IL EI F ++S AK L+ +L
Sbjct: 191 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLK 246
Query: 266 KDPKRRIT-----AAQVLEH 280
KDPK+R+ A +V+EH
Sbjct: 247 KDPKQRLGGGPSDAKEVMEH 266
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 134/260 (51%), Gaps = 17/260 (6%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR-LYLSGQPNVV 87
++LG+G FG L E +T R YA K + K+ + +A++++ + R L + P +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKE--VIIAKDEVAHTVTESRVLQNTRHPFLT 68
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
K ++ + VME GG+LF + + +E A IV+A+ HS V++
Sbjct: 69 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVY 128
Query: 148 RDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKE 205
RD+K EN D + +K+TDFG +G + G+ Y+APEVL YG+
Sbjct: 129 RDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRA 185
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265
+D W GV++Y ++ G PF+ + + ++ IL EI F ++S AK L+ +L
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLK 241
Query: 266 KDPKRRIT-----AAQVLEH 280
KDPK+R+ A +V+EH
Sbjct: 242 KDPKQRLGGGPSDAKEVMEH 261
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 134/260 (51%), Gaps = 17/260 (6%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR-LYLSGQPNVV 87
++LG+G FG L E +T R YA K + K+ + +A++++ + R L + P +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKE--VIIAKDEVAHTVTESRVLQNTRHPFLT 68
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
K ++ + VME GG+LF + + +E A IV+A+ HS V++
Sbjct: 69 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVY 128
Query: 148 RDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKE 205
RD+K EN D + +K+TDFG +G + G+ Y+APEVL YG+
Sbjct: 129 RDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRA 185
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265
+D W GV++Y ++ G PF+ + + ++ IL EI F ++S AK L+ +L
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLK 241
Query: 266 KDPKRRIT-----AAQVLEH 280
KDPK+R+ A +V+EH
Sbjct: 242 KDPKQRLGGGPSDAKEVMEH 261
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 134/260 (51%), Gaps = 17/260 (6%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR-LYLSGQPNVV 87
++LG+G FG L E +T R YA K + K+ + +A++++ + R L + P +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKE--VIIAKDEVAHTVTESRVLQNTRHPFLT 68
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
K ++ + VME GG+LF + + +E A IV+A+ HS V++
Sbjct: 69 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVY 128
Query: 148 RDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKE 205
RD+K EN D + +K+TDFG +G + G+ Y+APEVL YG+
Sbjct: 129 RDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRA 185
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265
+D W GV++Y ++ G PF+ + + ++ IL EI F ++S AK L+ +L
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLK 241
Query: 266 KDPKRRIT-----AAQVLEH 280
KDPK+R+ A +V+EH
Sbjct: 242 KDPKQRLGGGPSDAKEVMEH 261
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 134/260 (51%), Gaps = 17/260 (6%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR-LYLSGQPNVV 87
++LG+G FG L E +T R YA K + K+ + +A++++ + R L + P +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKE--VIIAKDEVAHTVTESRVLQNTRHPFLT 68
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
K ++ + VME GG+LF + + +E A IV+A+ HS V++
Sbjct: 69 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVY 128
Query: 148 RDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKE 205
RD+K EN D + +K+TDFG +G + G+ Y+APEVL YG+
Sbjct: 129 RDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRA 185
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265
+D W GV++Y ++ G PF+ + + ++ IL EI F ++S AK L+ +L
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLK 241
Query: 266 KDPKRRIT-----AAQVLEH 280
KDPK+R+ A +V+EH
Sbjct: 242 KDPKQRLGGGPSDAKEVMEH 261
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 134/260 (51%), Gaps = 17/260 (6%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR-LYLSGQPNVV 87
++LG+G FG L E +T R YA K + K+ + +A++++ + R L + P +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKE--VIIAKDEVAHTVTESRVLQNTRHPFLT 68
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
K ++ + VME GG+LF + + +E A IV+A+ HS V++
Sbjct: 69 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVY 128
Query: 148 RDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKE 205
RD+K EN D + +K+TDFG +G + G+ Y+APEVL YG+
Sbjct: 129 RDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRA 185
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265
+D W GV++Y ++ G PF+ + + ++ IL EI F ++S AK L+ +L
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLK 241
Query: 266 KDPKRRIT-----AAQVLEH 280
KDPK+R+ A +V+EH
Sbjct: 242 KDPKQRLGGGPSDAKEVMEH 261
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 123/252 (48%), Gaps = 9/252 (3%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
+ F +++G+G FG L + YA K + KK ++ E I E + L P
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
+V +++ ++ V++ GG+LF + + E A I +A+ HS+
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN 159
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-Y 202
+++RDLKPEN I D + +TDFG E G+ Y+APEVL ++ Y
Sbjct: 160 IVYRDLKPEN---ILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPY 216
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
+ +D W G +LY +L G+PPF++ YD IL + P+I+++A+ L+
Sbjct: 217 DRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSARHLLEG 272
Query: 263 MLTKDPKRRITA 274
+L KD +R+ A
Sbjct: 273 LLQKDRTKRLGA 284
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 134/260 (51%), Gaps = 17/260 (6%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR-LYLSGQPNVV 87
++LG+G FG L E +T R YA K + K+ + +A++++ + R L + P +
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKE--VIIAKDEVAHTVTESRVLQNTRHPFLT 71
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
K ++ + VME GG+LF + + +E A IV+A+ HS V++
Sbjct: 72 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVY 131
Query: 148 RDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKE 205
RD+K EN D + +K+TDFG +G + G+ Y+APEVL YG+
Sbjct: 132 RDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRA 188
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265
+D W GV++Y ++ G PF+ + + ++ IL EI F ++S AK L+ +L
Sbjct: 189 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLK 244
Query: 266 KDPKRRIT-----AAQVLEH 280
KDPK+R+ A +V+EH
Sbjct: 245 KDPKQRLGGGPSDAKEVMEH 264
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 135/254 (53%), Gaps = 18/254 (7%)
Query: 29 RMLGRGQFGVSYLCTENS---TNRPYACKSIAKKP-KMRLAENDMIRREIQIRLYLSGQP 84
++LG+G FG +L + S + YA K + K K+R + R+I + + P
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV---NHP 86
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
+V+ ++ E ++++++ GGDLF R+ + +E D L + A++ HS+G
Sbjct: 87 FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG 146
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFGSA--LLFEEGQVYRDIVGSGFYIAPEVLRRR- 201
+++RDLKPEN I D+ +K+TDFG + + E + Y G+ Y+APEV+ RR
Sbjct: 147 IIYRDLKPEN---ILLDEEGHIKLTDFGLSKESIDHEKKAY-SFCGTVEYMAPEVVNRRG 202
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
+ + D WS GV+++ +L+G PF + +K T IL+ ++ +S A+ L+R
Sbjct: 203 HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSLLR 258
Query: 262 RMLTKDPKRRITAA 275
+ ++P R+ A
Sbjct: 259 MLFKRNPANRLGAG 272
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 143/277 (51%), Gaps = 19/277 (6%)
Query: 14 LGKAYEDVMLHYF-FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRR 72
L K V ++ F + ++LG+G FG L E +T R YA K + K+ + +A++++
Sbjct: 141 LAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKE--VIVAKDEVAHT 198
Query: 73 EIQIR-LYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLR 131
+ R L S P + K +++ + VME GG+LF + + SE A
Sbjct: 199 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA 258
Query: 132 AIVNAVNVCHS-MGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGS 189
IV+A++ HS V++RDLK EN D + +K+TDFG ++G + G+
Sbjct: 259 EIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGT 315
Query: 190 GFYIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDP 248
Y+APEVL YG+ +D W GV++Y ++ G PF+ + + ++ IL EI F
Sbjct: 316 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR-- 373
Query: 249 WPSISSTAKDLVRRMLTKDPKRRIT-----AAQVLEH 280
++ AK L+ +L KDPK+R+ A ++++H
Sbjct: 374 --TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 408
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 135/254 (53%), Gaps = 18/254 (7%)
Query: 29 RMLGRGQFGVSYLCTENS---TNRPYACKSIAKKP-KMRLAENDMIRREIQIRLYLSGQP 84
++LG+G FG +L + S + YA K + K K+R + R+I + + P
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV---NHP 86
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
+V+ ++ E ++++++ GGDLF R+ + +E D L + A++ HS+G
Sbjct: 87 FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG 146
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFGSA--LLFEEGQVYRDIVGSGFYIAPEVLRRR- 201
+++RDLKPEN I D+ +K+TDFG + + E + Y G+ Y+APEV+ RR
Sbjct: 147 IIYRDLKPEN---ILLDEEGHIKLTDFGLSKESIDHEKKAY-SFCGTVEYMAPEVVNRRG 202
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
+ + D WS GV+++ +L+G PF + +K T IL+ ++ +S A+ L+R
Sbjct: 203 HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSLLR 258
Query: 262 RMLTKDPKRRITAA 275
+ ++P R+ A
Sbjct: 259 MLFKRNPANRLGAG 272
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 135/254 (53%), Gaps = 18/254 (7%)
Query: 29 RMLGRGQFGVSYLCTENS---TNRPYACKSIAKKP-KMRLAENDMIRREIQIRLYLSGQP 84
++LG+G FG +L + S + YA K + K K+R + R+I + + P
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV---NHP 87
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
+V+ ++ E ++++++ GGDLF R+ + +E D L + A++ HS+G
Sbjct: 88 FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG 147
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFGSA--LLFEEGQVYRDIVGSGFYIAPEVLRRR- 201
+++RDLKPEN I D+ +K+TDFG + + E + Y G+ Y+APEV+ RR
Sbjct: 148 IIYRDLKPEN---ILLDEEGHIKLTDFGLSKESIDHEKKAY-SFCGTVEYMAPEVVNRRG 203
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
+ + D WS GV+++ +L+G PF + +K T IL+ ++ +S A+ L+R
Sbjct: 204 HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSLLR 259
Query: 262 RMLTKDPKRRITAA 275
+ ++P R+ A
Sbjct: 260 MLFKRNPANRLGAG 273
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 143/277 (51%), Gaps = 19/277 (6%)
Query: 14 LGKAYEDVMLHYF-FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRR 72
L K V ++ F + ++LG+G FG L E +T R YA K + K+ + +A++++
Sbjct: 138 LAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKE--VIVAKDEVAHT 195
Query: 73 EIQIR-LYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLR 131
+ R L S P + K +++ + VME GG+LF + + SE A
Sbjct: 196 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA 255
Query: 132 AIVNAVNVCHS-MGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGS 189
IV+A++ HS V++RDLK EN D + +K+TDFG ++G + G+
Sbjct: 256 EIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGT 312
Query: 190 GFYIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDP 248
Y+APEVL YG+ +D W GV++Y ++ G PF+ + + ++ IL EI F
Sbjct: 313 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR-- 370
Query: 249 WPSISSTAKDLVRRMLTKDPKRRIT-----AAQVLEH 280
++ AK L+ +L KDPK+R+ A ++++H
Sbjct: 371 --TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 136/261 (52%), Gaps = 18/261 (6%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR-LYLSGQPNVV 87
++LG+G FG L E +T R YA K + K+ + +A++++ + R L S P +
Sbjct: 14 KLLGKGTFGKVILVKEKATGRYYAMKILKKE--VIVAKDEVAHTLTENRVLQNSRHPFLT 71
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS-MGVM 146
K +++ + VME GG+LF + + SE A IV+A++ HS V+
Sbjct: 72 ALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVV 131
Query: 147 HRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGK 204
+RDLK EN D + +K+TDFG ++G + G+ Y+APEVL YG+
Sbjct: 132 YRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGR 188
Query: 205 EIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRML 264
+D W GV++Y ++ G PF+ + + ++ IL EI F ++ AK L+ +L
Sbjct: 189 AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSGLL 244
Query: 265 TKDPKRRIT-----AAQVLEH 280
KDPK+R+ A ++++H
Sbjct: 245 KKDPKQRLGGGSEDAKEIMQH 265
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 136/261 (52%), Gaps = 18/261 (6%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR-LYLSGQPNVV 87
++LG+G FG L E +T R YA K + K+ + +A++++ + R L S P +
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILKKE--VIVAKDEVAHTLTENRVLQNSRHPFLT 72
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS-MGVM 146
K +++ + VME GG+LF + + SE A IV+A++ HS V+
Sbjct: 73 ALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVV 132
Query: 147 HRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGK 204
+RDLK EN D + +K+TDFG ++G + G+ Y+APEVL YG+
Sbjct: 133 YRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGR 189
Query: 205 EIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRML 264
+D W GV++Y ++ G PF+ + + ++ IL EI F ++ AK L+ +L
Sbjct: 190 AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSGLL 245
Query: 265 TKDPKRRIT-----AAQVLEH 280
KDPK+R+ A ++++H
Sbjct: 246 KKDPKQRLGGGSEDAKEIMQH 266
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 136/261 (52%), Gaps = 18/261 (6%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR-LYLSGQPNVV 87
++LG+G FG L E +T R YA K + K+ + +A++++ + R L S P +
Sbjct: 16 KLLGKGTFGKVILVKEKATGRYYAMKILKKE--VIVAKDEVAHTLTENRVLQNSRHPFLT 73
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS-MGVM 146
K +++ + VME GG+LF + + SE A IV+A++ HS V+
Sbjct: 74 ALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVV 133
Query: 147 HRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGK 204
+RDLK EN D + +K+TDFG ++G + G+ Y+APEVL YG+
Sbjct: 134 YRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGR 190
Query: 205 EIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRML 264
+D W GV++Y ++ G PF+ + + ++ IL EI F ++ AK L+ +L
Sbjct: 191 AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSGLL 246
Query: 265 TKDPKRRIT-----AAQVLEH 280
KDPK+R+ A ++++H
Sbjct: 247 KKDPKQRLGGGSEDAKEIMQH 267
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 135/256 (52%), Gaps = 22/256 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++GRG FG + +T R YA K + K ++ AE R E + + Q +
Sbjct: 96 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW-ITA 154
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNS--ERDAATVLRAIVNAVNVCHSMGVM 146
++DE +++VM+ GGDL +++K + E A + +V A++ H + +
Sbjct: 155 LHYAFQDENHLYLVMDYYVGGDLL-TLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYV 213
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSAL-LFEEGQVYRDI-VGSGFYIAPEVLRR---- 200
HRD+KP+N + D N +++ DFGS L + ++G V + VG+ YI+PE+L+
Sbjct: 214 HRDIKPDN---VLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDG 270
Query: 201 --RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS----ISS 254
+YG E D WS GV +Y +L G PF+AE+ TY I+ E F +PS +S
Sbjct: 271 MGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ---FPSHVTDVSE 327
Query: 255 TAKDLVRRMLTKDPKR 270
AKDL++R++ +R
Sbjct: 328 EAKDLIQRLICSRERR 343
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 133/256 (51%), Gaps = 22/256 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++GRG FG + + ++ +A K + K ++ AE R E + L +
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDV-LVNGDSKWITT 138
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVCHSMGVM 146
++D+ +++VM+ GGDL +++K + E A L +V A++ H + +
Sbjct: 139 LHYAFQDDNNLYLVMDYYVGGDLL-TLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYV 197
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSAL-LFEEGQVYRDI-VGSGFYIAPEVL------ 198
HRD+KP+N I D N +++ DFGS L L E+G V + VG+ YI+PE+L
Sbjct: 198 HRDIKPDN---ILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGG 254
Query: 199 RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS----ISS 254
+ RYG E D WS GV +Y +L G PF+AE+ TY I+ + F +P+ +S
Sbjct: 255 KGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ---FPTQVTDVSE 311
Query: 255 TAKDLVRRMLTKDPKR 270
AKDL+RR++ R
Sbjct: 312 NAKDLIRRLICSREHR 327
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 135/256 (52%), Gaps = 22/256 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++GRG FG + +T R YA K + K ++ AE R E + + Q +
Sbjct: 80 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ-WITA 138
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNS--ERDAATVLRAIVNAVNVCHSMGVM 146
++DE +++VM+ GGDL +++K + E A + +V A++ H + +
Sbjct: 139 LHYAFQDENHLYLVMDYYVGGDLL-TLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYV 197
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSAL-LFEEGQVYRDI-VGSGFYIAPEVLRR---- 200
HRD+KP+N + D N +++ DFGS L + ++G V + VG+ YI+PE+L+
Sbjct: 198 HRDIKPDN---VLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDG 254
Query: 201 --RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS----ISS 254
+YG E D WS GV +Y +L G PF+AE+ TY I+ E F +PS +S
Sbjct: 255 MGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ---FPSHVTDVSE 311
Query: 255 TAKDLVRRMLTKDPKR 270
AKDL++R++ +R
Sbjct: 312 EAKDLIQRLICSRERR 327
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 133/269 (49%), Gaps = 20/269 (7%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R+LG+G FG C +T + YACK + KK + M E QI ++ + VV
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR-FVVS 248
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC------HS 142
YE + A+ +V+ L GGDL I G +A RA+ A +C H
Sbjct: 249 LAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA----RAVFYAAEICCGLEDLHR 304
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RR 201
+++RDLKPEN I DD+ ++++D G A+ EGQ + VG+ Y+APEV++ R
Sbjct: 305 ERIVYRDLKPEN---ILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNER 361
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
Y D W+ G +LY +++G PF KK + + + + + S A+ L
Sbjct: 362 YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCS 421
Query: 262 RMLTKDPKRRI-----TAAQVLEHPWLRE 285
++L KDP R+ +A +V EHP ++
Sbjct: 422 QLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 133/269 (49%), Gaps = 20/269 (7%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R+LG+G FG C +T + YACK + KK + M E QI ++ + VV
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR-FVVS 248
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC------HS 142
YE + A+ +V+ L GGDL I G +A RA+ A +C H
Sbjct: 249 LAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA----RAVFYAAEICCGLEDLHR 304
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RR 201
+++RDLKPEN I DD+ ++++D G A+ EGQ + VG+ Y+APEV++ R
Sbjct: 305 ERIVYRDLKPEN---ILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNER 361
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
Y D W+ G +LY +++G PF KK + + + + + S A+ L
Sbjct: 362 YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCS 421
Query: 262 RMLTKDPKRRI-----TAAQVLEHPWLRE 285
++L KDP R+ +A +V EHP ++
Sbjct: 422 QLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 135/279 (48%), Gaps = 22/279 (7%)
Query: 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRRE 73
GK E + Y G +LG G FG Y S N P A K + K E + R
Sbjct: 28 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 74 IQIRLY---LSGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATV 129
+++ L SG V+ +E + +++E E DLFD I +G E A +
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++ VY D G
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 203
Query: 189 SGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246
+ Y PE +R R +G+ +WS G++LY ++ G PF + + I++G++ F
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQ 257
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+SS + L+R L P R T ++ HPW+++
Sbjct: 258 ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 135/279 (48%), Gaps = 22/279 (7%)
Query: 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRRE 73
GK E + Y G +LG G FG Y S N P A K + K E + R
Sbjct: 43 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 102
Query: 74 IQIRLY---LSGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATV 129
+++ L SG V+ +E + +++E E DLFD I +G E A +
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++ VY D G
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 218
Query: 189 SGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246
+ Y PE +R R +G+ +WS G++LY ++ G PF + + I++G++ F
Sbjct: 219 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQ 272
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+SS + L+R L P R T ++ HPW+++
Sbjct: 273 ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 135/279 (48%), Gaps = 22/279 (7%)
Query: 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRRE 73
GK E + Y G +LG G FG Y S N P A K + K E + R
Sbjct: 16 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 74 IQIRLY---LSGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATV 129
+++ L SG V+ +E + +++E E DLFD I +G E A +
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++ VY D G
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 191
Query: 189 SGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246
+ Y PE +R R +G+ +WS G++LY ++ G PF + + I++G++ F
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQ 245
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+SS + L+R L P R T ++ HPW+++
Sbjct: 246 ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 135/279 (48%), Gaps = 22/279 (7%)
Query: 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRRE 73
GK E + Y G +LG G FG Y S N P A K + K E + R
Sbjct: 15 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 74
Query: 74 IQIRLY---LSGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATV 129
+++ L SG V+ +E + +++E E DLFD I +G E A +
Sbjct: 75 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++ VY D G
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 190
Query: 189 SGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246
+ Y PE +R R +G+ +WS G++LY ++ G PF + + I++G++ F
Sbjct: 191 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQ 244
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+SS + L+R L P R T ++ HPW+++
Sbjct: 245 ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 135/279 (48%), Gaps = 22/279 (7%)
Query: 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRRE 73
GK E + Y G +LG G FG Y S N P A K + K E + R
Sbjct: 35 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 94
Query: 74 IQIRLY---LSGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATV 129
+++ L SG V+ +E + +++E E DLFD I +G E A +
Sbjct: 95 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 154
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++ VY D G
Sbjct: 155 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 210
Query: 189 SGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246
+ Y PE +R R +G+ +WS G++LY ++ G PF + + I++G++ F
Sbjct: 211 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQ 264
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+SS + L+R L P R T ++ HPW+++
Sbjct: 265 ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 299
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 134/279 (48%), Gaps = 22/279 (7%)
Query: 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRRE 73
GK E + Y G +LG G FG Y S N P A K + K E + R
Sbjct: 29 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 74 IQIRLY---LSGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATV 129
+++ L SG V+ +E + +++E E DLFD I +G E A +
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++ VY D G
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 204
Query: 189 SGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246
+ Y PE +R R +G+ +WS G++LY ++ G PF + + I+ G++ F
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQ 258
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+SS + L+R L P R T ++ HPW+++
Sbjct: 259 ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 134/279 (48%), Gaps = 22/279 (7%)
Query: 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRRE 73
GK E + Y G +LG G FG Y S N P A K + K E + R
Sbjct: 28 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 74 IQIRLY---LSGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATV 129
+++ L SG V+ +E + +++E E DLFD I +G E A +
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++ VY D G
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 203
Query: 189 SGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246
+ Y PE +R R +G+ +WS G++LY ++ G PF + + I+ G++ F
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQ 257
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+SS + L+R L P R T ++ HPW+++
Sbjct: 258 ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 134/279 (48%), Gaps = 22/279 (7%)
Query: 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRRE 73
GK E + Y G +LG G FG Y S N P A K + K E + R
Sbjct: 29 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 74 IQIRLY---LSGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATV 129
+++ L SG V+ +E + +++E E DLFD I +G E A +
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++ VY D G
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 204
Query: 189 SGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246
+ Y PE +R R +G+ +WS G++LY ++ G PF + + I+ G++ F
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQ 258
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+SS + L+R L P R T ++ HPW+++
Sbjct: 259 ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 134/279 (48%), Gaps = 22/279 (7%)
Query: 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRRE 73
GK E + Y G +LG G FG Y S N P A K + K E + R
Sbjct: 28 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 74 IQIRLY---LSGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATV 129
+++ L SG V+ +E + +++E E DLFD I +G E A +
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++ VY D G
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 203
Query: 189 SGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246
+ Y PE +R R +G+ +WS G++LY ++ G PF + + I+ G++ F
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQ 257
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+SS + L+R L P R T ++ HPW+++
Sbjct: 258 ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 135/258 (52%), Gaps = 16/258 (6%)
Query: 24 HYFFGRMLGRGQFGVSYLC---TENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYL 80
H+ ++LG+G FG +L T + YA K + KK +++ + + E I L
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMK-VLKKATLKVRDRVRTKMERDI-LAD 86
Query: 81 SGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC 140
P VV+ ++ E ++++++ GGDLF R+ + +E D L + ++
Sbjct: 87 VNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHL 146
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA--LLFEEGQVYRDIVGSGFYIAPEVL 198
HS+G+++RDLKPEN I D+ +K+TDFG + + E + Y G+ Y+APEV+
Sbjct: 147 HSLGIIYRDLKPEN---ILLDEEGHIKLTDFGLSKEAIDHEKKAY-SFCGTVEYMAPEVV 202
Query: 199 RRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
R+ + D WS GV+++ +L+G PF + +K T IL+ ++ +S+ A+
Sbjct: 203 NRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQ----FLSTEAQ 258
Query: 258 DLVRRMLTKDPKRRITAA 275
L+R + ++P R+ +
Sbjct: 259 SLLRALFKRNPANRLGSG 276
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 124/265 (46%), Gaps = 14/265 (5%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
F +LG+G FG L T YA K + K ++ + + E ++ L P +
Sbjct: 23 FLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFL 82
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
+ S ++ ++ VME GGDL I G E A I + H G++
Sbjct: 83 TQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGII 142
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSAL-LFEEGQVYRDIVGSGFYIAPEVLRRR-YGK 204
+RDLK +N + D +K+ DFG +G R+ G+ YIAPE++ + YGK
Sbjct: 143 YRDLKLDN---VMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGK 199
Query: 205 EIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRML 264
+D W+ GV+LY +L+G PPF E + + +I++ + + S+S A + + ++
Sbjct: 200 SVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLSKEAVSICKGLM 255
Query: 265 TKDPKRRITAA-----QVLEHPWLR 284
TK P +R+ V EH + R
Sbjct: 256 TKHPAKRLGCGPEGERDVREHAFFR 280
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 134/279 (48%), Gaps = 22/279 (7%)
Query: 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRRE 73
GK E + Y G +LG G FG Y S N P A K + K E + R
Sbjct: 15 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 74
Query: 74 IQIRLY---LSGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATV 129
+++ L SG V+ +E + +++E E DLFD I +G E A +
Sbjct: 75 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++ VY D G
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 190
Query: 189 SGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246
+ Y PE +R R +G+ +WS G++LY ++ G PF + + I++G++ F
Sbjct: 191 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQ 244
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+S + L+R L P R T ++ HPW+++
Sbjct: 245 ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 134/279 (48%), Gaps = 22/279 (7%)
Query: 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRRE 73
GK E + Y G +LG G FG Y S N P A K + K E + R
Sbjct: 43 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 102
Query: 74 IQIRLY---LSGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATV 129
+++ L SG V+ +E + +++E E DLFD I +G E A +
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++ VY D G
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 218
Query: 189 SGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246
+ Y PE +R R +G+ +WS G++LY ++ G PF + + I++G++ F
Sbjct: 219 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQ 272
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+S + L+R L P R T ++ HPW+++
Sbjct: 273 ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 134/279 (48%), Gaps = 22/279 (7%)
Query: 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRRE 73
GK E + Y G +LG G FG Y S N P A K + K E + R
Sbjct: 48 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 107
Query: 74 IQIRLY---LSGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATV 129
+++ L SG V+ +E + +++E E DLFD I +G E A +
Sbjct: 108 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 167
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++ VY D G
Sbjct: 168 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 223
Query: 189 SGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246
+ Y PE +R R +G+ +WS G++LY ++ G PF + + I++G++ F
Sbjct: 224 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQ 277
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+S + L+R L P R T ++ HPW+++
Sbjct: 278 ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 312
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 134/278 (48%), Gaps = 22/278 (7%)
Query: 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRREI 74
K E + Y G +LG G FG Y S N P A K + K E + R +
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 75 QIRLY---LSGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATVL 130
++ L SG V+ +E + +++E E DLFD I +G E A +
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFF 120
Query: 131 RAIVNAVNVCHSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVYRDIVGS 189
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++ VY D G+
Sbjct: 121 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDGT 176
Query: 190 GFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD 247
Y PE +R R +G+ +WS G++LY ++ G PF + + I++G++ F
Sbjct: 177 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQ- 229
Query: 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+SS + L+R L P R T ++ HPW+++
Sbjct: 230 ---RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 144/285 (50%), Gaps = 19/285 (6%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACK--SIAKKPKMRLAEND-MIRREIQIRLYLSGQPNVV 87
+G+G G Y + +T + A + ++ ++PK L N+ ++ RE + PN+V
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE-------NKNPNIV 81
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ +Y + VVME GG L D ++ + E A V R + A+ HS V+H
Sbjct: 82 NYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIH 140
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD-IVGSGFYIAPEVLRRR-YGKE 205
RD+K +N + D + +K+TDFG Q R +VG+ +++APEV+ R+ YG +
Sbjct: 141 RDIKSDNI-LLGMDGS--VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPK 197
Query: 206 IDIWSAGVILYILLSGVPPFWAETK-KGTYDAILQGEIDFDTDPWPSISSTAKDLVRRML 264
+DIWS G++ ++ G PP+ E + Y G + +S+ +D + R L
Sbjct: 198 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSAIFRDFLNRCL 255
Query: 265 TKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMNKLK 309
D ++R +A ++++H +L+ + S T +I K+ + N L+
Sbjct: 256 EMDVEKRGSAKELIQHQFLKIAKPLSSLTPLIAAAKEATKNNHLE 300
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 134/279 (48%), Gaps = 22/279 (7%)
Query: 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRRE 73
GK E + Y G +LG G FG Y S N P A K + K E + R
Sbjct: 16 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 74 IQIRLY---LSGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATV 129
+++ L SG V+ +E + +++E E DLFD I +G E A +
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++ VY D G
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 191
Query: 189 SGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246
+ Y PE +R R +G+ +WS G++LY ++ G PF + + I++G++ F
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQ 245
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+S + L+R L P R T ++ HPW+++
Sbjct: 246 ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 144/282 (51%), Gaps = 19/282 (6%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACK--SIAKKPKMRLAEND-MIRREIQIRLYLSGQPNVV 87
+G+G G Y + +T + A + ++ ++PK L N+ ++ RE + PN+V
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE-------NKNPNIV 80
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ +Y + VVME GG L D ++ + E A V R + A+ HS V+H
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIH 139
Query: 148 RDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKE 205
RD+K +N + D + +K+TDFG A + E ++VG+ +++APEV+ R+ YG +
Sbjct: 140 RDIKSDNI-LLGMDGS--VKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPK 196
Query: 206 IDIWSAGVILYILLSGVPPFWAETK-KGTYDAILQGEIDFDTDPWPSISSTAKDLVRRML 264
+DIWS G++ ++ G PP+ E + Y G + +S+ +D + R L
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSAIFRDFLNRCL 254
Query: 265 TKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMN 306
D ++R +A ++L+H +L+ + S T +I K+ + N
Sbjct: 255 DMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAKEATKNN 296
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 134/279 (48%), Gaps = 22/279 (7%)
Query: 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRRE 73
GK E + Y G +LG G FG Y S N P A K + K E + R
Sbjct: 16 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 74 IQIRLY---LSGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATV 129
+++ L SG V+ +E + +++E E DLFD I +G E A +
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++ VY D G
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 191
Query: 189 SGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246
+ Y PE +R R +G+ +WS G++LY ++ G PF + + I++G++ F
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQ 245
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+S + L+R L P R T ++ HPW+++
Sbjct: 246 ----RVSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQD 280
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 134/278 (48%), Gaps = 22/278 (7%)
Query: 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRREI 74
K E + Y G +LG G FG Y S N P A K + K E + R +
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 75 QIRLY---LSGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATVL 130
++ L SG V+ +E + +++E E DLFD I +G E A +
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 131 RAIVNAVNVCHSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVYRDIVGS 189
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++ VY D G+
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDGT 177
Query: 190 GFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD 247
Y PE +R R +G+ +WS G++LY ++ G PF + + I++G++ F
Sbjct: 178 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQ- 230
Query: 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+SS + L+R L P R T ++ HPW+++
Sbjct: 231 ---RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 134/278 (48%), Gaps = 22/278 (7%)
Query: 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRREI 74
K E + Y G +LG G FG Y S N P A K + K E + R +
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 75 QIRLY---LSGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATVL 130
++ L SG V+ +E + +++E E DLFD I +G E A +
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 131 RAIVNAVNVCHSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVYRDIVGS 189
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++ VY D G+
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDGT 177
Query: 190 GFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD 247
Y PE +R R +G+ +WS G++LY ++ G PF + + I++G++ F
Sbjct: 178 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQ- 230
Query: 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+SS + L+R L P R T ++ HPW+++
Sbjct: 231 ---RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 134/278 (48%), Gaps = 22/278 (7%)
Query: 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRREI 74
K E + Y G +LG G FG Y S N P A K + K E + R +
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 75 QIRLY---LSGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATVL 130
++ L SG V+ +E + +++E E DLFD I +G E A +
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 131 RAIVNAVNVCHSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVYRDIVGS 189
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++ VY D G+
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDGT 177
Query: 190 GFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD 247
Y PE +R R +G+ +WS G++LY ++ G PF + + I++G++ F
Sbjct: 178 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQ- 230
Query: 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+SS + L+R L P R T ++ HPW+++
Sbjct: 231 ---RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 134/278 (48%), Gaps = 22/278 (7%)
Query: 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRREI 74
K E + Y G +LG G FG Y S N P A K + K E + R +
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 75 QIRLY---LSGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATVL 130
++ L SG V+ +E + +++E E DLFD I +G E A +
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 120
Query: 131 RAIVNAVNVCHSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVYRDIVGS 189
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++ VY D G+
Sbjct: 121 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDGT 176
Query: 190 GFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD 247
Y PE +R R +G+ +WS G++LY ++ G PF + + I++G++ F
Sbjct: 177 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQ- 229
Query: 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+SS + L+R L P R T ++ HPW+++
Sbjct: 230 ---RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 133/279 (47%), Gaps = 22/279 (7%)
Query: 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRRE 73
GK E + Y G +LG G FG Y S N P A K + K E + R
Sbjct: 29 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 74 IQIRLY---LSGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATV 129
+++ L SG V+ +E + +++E E DLFD I +G E A +
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++ VY D G
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 204
Query: 189 SGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246
+ Y PE +R R +G+ +WS G++LY ++ G PF + + I+ G++ F
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQ 258
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+S + L+R L P R T ++ HPW+++
Sbjct: 259 ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 133/279 (47%), Gaps = 22/279 (7%)
Query: 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRRE 73
GK E + Y G +LG G FG Y S N P A K + K E + R
Sbjct: 28 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 74 IQIRLY---LSGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATV 129
+++ L SG V+ +E + +++E E DLFD I +G E A +
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++ VY D G
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 203
Query: 189 SGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246
+ Y PE +R R +G+ +WS G++LY ++ G PF + + I+ G++ F
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQ 257
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+S + L+R L P R T ++ HPW+++
Sbjct: 258 ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 133/279 (47%), Gaps = 22/279 (7%)
Query: 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRRE 73
GK E + Y G +LG G FG Y S N P A K + K E + R
Sbjct: 29 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 74 IQIRLY---LSGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATV 129
+++ L SG V+ +E + +++E E DLFD I +G E A +
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++ VY D G
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 204
Query: 189 SGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246
+ Y PE +R R +G+ +WS G++LY ++ G PF + + I+ G++ F
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQ 258
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+S + L+R L P R T ++ HPW+++
Sbjct: 259 ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 131/269 (48%), Gaps = 22/269 (8%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRREIQIRLY---L 80
Y G +LG G FG Y S N P A K + K E + R +++ L
Sbjct: 9 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 68
Query: 81 SGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATVLRAIVNAVNV 139
SG V+ +E + +++E E DLFD I +G E A + ++ AV
Sbjct: 69 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 128
Query: 140 CHSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
CH+ GV+HRD+K EN ++R + LK+ DFGS L ++ VY D G+ Y PE +
Sbjct: 129 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWI 184
Query: 199 R--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256
R R +G+ +WS G++LY ++ G PF + + I++G++ F +SS
Sbjct: 185 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQ----RVSSEC 234
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+R L P R T ++ HPW+++
Sbjct: 235 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 263
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 136/295 (46%), Gaps = 43/295 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR----LYLSGQPNV 86
+G G +GV + C T + A K + +E+D + ++I +R L PN+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLE------SEDDPVIKKIALREIRMLKQLKHPNL 64
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V + + +H+V E C+ L + + E ++ + AVN CH +
Sbjct: 65 VNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCI 124
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYRDIVGSGFYIAPEVL--RRRYG 203
HRD+KPEN I++ ++++K+ DFG A LL Y D V + +Y +PE+L +YG
Sbjct: 125 HRDVKPENI-LITK--HSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYG 181
Query: 204 KEIDIWSAGVILYILLSGVPPFWAET--------KKGTYDAILQGEIDFDT--------- 246
+D+W+ G + LLSGVP + ++ +K D I + + F T
Sbjct: 182 PPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKI 241
Query: 247 -DP---------WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD 291
DP +P+IS A L++ L DP R+T Q+L HP+ E D
Sbjct: 242 PDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIED 296
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 142/282 (50%), Gaps = 19/282 (6%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACK--SIAKKPKMRLAEND-MIRREIQIRLYLSGQPNVV 87
+G+G G Y + +T + A + ++ ++PK L N+ ++ RE + PN+V
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE-------NKNPNIV 80
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ +Y + VVME GG L D ++ + E A V R + A+ HS V+H
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIH 139
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD-IVGSGFYIAPEVLRRR-YGKE 205
RD+K +N + D + +K+TDFG Q R +VG+ +++APEV+ R+ YG +
Sbjct: 140 RDIKSDNI-LLGMDGS--VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPK 196
Query: 206 IDIWSAGVILYILLSGVPPFWAETK-KGTYDAILQGEIDFDTDPWPSISSTAKDLVRRML 264
+DIWS G++ ++ G PP+ E + Y G + +S+ +D + R L
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSAIFRDFLNRCL 254
Query: 265 TKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMN 306
D ++R +A ++L+H +L+ + S T +I K+ + N
Sbjct: 255 EMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAKEATKNN 296
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 142/282 (50%), Gaps = 19/282 (6%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACK--SIAKKPKMRLAEND-MIRREIQIRLYLSGQPNVV 87
+G+G G Y + +T + A + ++ ++PK L N+ ++ RE + PN+V
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE-------NKNPNIV 80
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ +Y + VVME GG L D ++ + E A V R + A+ HS V+H
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIH 139
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD-IVGSGFYIAPEVLRRR-YGKE 205
RD+K +N + D + +K+TDFG Q R +VG+ +++APEV+ R+ YG +
Sbjct: 140 RDIKSDNI-LLGMDGS--VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK 196
Query: 206 IDIWSAGVILYILLSGVPPFWAETK-KGTYDAILQGEIDFDTDPWPSISSTAKDLVRRML 264
+DIWS G++ ++ G PP+ E + Y G + +S+ +D + R L
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSAIFRDFLNRCL 254
Query: 265 TKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMN 306
D ++R +A ++L+H +L+ + S T +I K+ + N
Sbjct: 255 DMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAKEATKNN 296
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 131/269 (48%), Gaps = 22/269 (8%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRREIQIRLY---L 80
Y G +LG G FG Y S N P A K + K E + R +++ L
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 81 SGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATVLRAIVNAVNV 139
SG V+ +E + +++E E DLFD I +G E A + ++ AV
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 140 CHSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
CH+ GV+HRD+K EN ++R + LK+ DFGS L ++ VY D G+ Y PE +
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWI 181
Query: 199 R--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256
R R +G+ +WS G++LY ++ G PF + + I++G++ F +SS
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQ----RVSSEC 231
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+R L P R T ++ HPW+++
Sbjct: 232 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 137/274 (50%), Gaps = 20/274 (7%)
Query: 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR 77
Y M Y + +G G FG + L R Y K I +M E + RRE+ +
Sbjct: 19 YFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEI-NISRMSSKEREESRREVAVL 77
Query: 78 LYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIA-KGYNSERDAAT-VLRAIVN 135
+ PN+V+++ ++E+ ++++VM+ CEGGDLF RI A KG + D I
Sbjct: 78 ANMK-HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICL 136
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYRDIVGSGFYIA 194
A+ H ++HRD+K +N F+++D +++ DFG A +L ++ R +G+ +Y++
Sbjct: 137 ALKHVHDRKILHRDIKSQNI-FLTKD--GTVQLGDFGIARVLNSTVELARACIGTPYYLS 193
Query: 195 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI- 252
PE+ + Y + DIW+ G +LY L + F A + K I+ G +P +
Sbjct: 194 PEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS-------FPPVS 246
Query: 253 ---SSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
S + LV ++ ++P+ R + +LE ++
Sbjct: 247 LHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFI 280
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 145/285 (50%), Gaps = 19/285 (6%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACK--SIAKKPKMRLAEND-MIRREIQIRLYLSGQPNVV 87
+G+G G Y + +T + A + ++ ++PK L N+ ++ RE + PN+V
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE-------NKNPNIV 81
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ +Y + VVME GG L D ++ + E A V R + A+ HS V+H
Sbjct: 82 NYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIH 140
Query: 148 RDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKE 205
R++K +N + D + +K+TDFG A + E +VG+ +++APEV+ R+ YG +
Sbjct: 141 RNIKSDNI-LLGMDGS--VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK 197
Query: 206 IDIWSAGVILYILLSGVPPFWAETK-KGTYDAILQGEIDFDTDPWPSISSTAKDLVRRML 264
+DIWS G++ ++ G PP+ E + Y G + +S+ +D + R L
Sbjct: 198 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSAIFRDFLNRCL 255
Query: 265 TKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMNKLK 309
D ++R +A ++++H +L+ + S T +I K+ + N L+
Sbjct: 256 EMDVEKRGSAKELIQHQFLKIAKPLSSLTPLIAAAKEATKNNHLE 300
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 130/269 (48%), Gaps = 22/269 (8%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRREIQIRLY---L 80
Y G +LG G FG Y S N P A K + K E + R +++ L
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 81 SGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATVLRAIVNAVNV 139
SG V+ +E + +++E E DLFD I +G E A + ++ AV
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 140 CHSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
CH+ GV+HRD+K EN ++R + LK+ DFGS L ++ VY D G+ Y PE +
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWI 181
Query: 199 R--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256
R R +G+ +WS G++LY ++ G PF + + I+ G++ F +SS
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQ----RVSSEC 231
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+R L P R T ++ HPW+++
Sbjct: 232 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 133/278 (47%), Gaps = 22/278 (7%)
Query: 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRREI 74
K E + Y G +LG G FG Y S N P A K + K E + R +
Sbjct: 24 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 83
Query: 75 QIRLY---LSGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATVL 130
++ L SG V+ +E + +++E E DLFD I +G E A +
Sbjct: 84 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 143
Query: 131 RAIVNAVNVCHSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVYRDIVGS 189
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++ VY D G+
Sbjct: 144 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDGT 199
Query: 190 GFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD 247
Y PE +R R +G+ +WS G++LY ++ G PF + + I++G++ F
Sbjct: 200 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQ- 252
Query: 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+S + L+R L P R T ++ HPW+++
Sbjct: 253 ---RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 287
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 130/269 (48%), Gaps = 22/269 (8%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRREIQIRLY---L 80
Y G +LG G FG Y S N P A K + K E + R +++ L
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 81 SGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATVLRAIVNAVNV 139
SG V+ +E + +++E E DLFD I +G E A + ++ AV
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 140 CHSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
CH+ GV+HRD+K EN ++R + LK+ DFGS L ++ VY D G+ Y PE +
Sbjct: 126 CHNXGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWI 181
Query: 199 R--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256
R R +G+ +WS G++LY ++ G PF + + I++G++ F +S
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQ----RVSXEC 231
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+R L P R T ++ HPW+++
Sbjct: 232 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 122/267 (45%), Gaps = 15/267 (5%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
F R+LG+G FG L T YA K + K ++ + + E +I P +
Sbjct: 27 FIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFL 86
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
+ ++ + VME GGDL I E A I++A+ H G++
Sbjct: 87 TQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGII 146
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSALL-FEEGQVYRDIVGSGFYIAPEVLRRR-YGK 204
+RDLK +N + D K+ DFG G G+ YIAPE+L+ YG
Sbjct: 147 YRDLKLDN---VLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGP 203
Query: 205 EIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRML 264
+D W+ GV+LY +L G PF AE + ++AIL E+ + T W + A +++ +
Sbjct: 204 AVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT--W--LHEDATGILKSFM 259
Query: 265 TKDPKRRITA------AQVLEHPWLRE 285
TK+P R+ + +L HP+ +E
Sbjct: 260 TKNPTMRLGSLTQGGEHAILRHPFFKE 286
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 139/274 (50%), Gaps = 22/274 (8%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR- 77
ED +LH +MLG+G FG +L TN+ +A K++ K + L ++D+ ++ R
Sbjct: 17 EDFILH----KMLGKGSFGKVFLAEFKKTNQFFAIKALKKD--VVLMDDDVECTMVEKRV 70
Query: 78 LYLSGQ-PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA-IVN 135
L L+ + P + T++ + + VME GGDL I + + AT A I+
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI-QSCHKFDLSRATFYAAEIIL 129
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD-IVGSGFYIA 194
+ HS G+++RDLK +N I D + +K+ DFG G + G+ YIA
Sbjct: 130 GLQFLHSKGIVYRDLKLDN---ILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIA 186
Query: 195 PEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS-I 252
PE+L ++Y +D WS GV+LY +L G PF + ++ + + I D +P +
Sbjct: 187 PEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS-----IRMDNPFYPRWL 241
Query: 253 SSTAKDLVRRMLTKDPKRRI-TAAQVLEHPWLRE 285
AKDL+ ++ ++P++R+ + +HP RE
Sbjct: 242 EKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 275
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 138/274 (50%), Gaps = 22/274 (8%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR- 77
ED LH +MLG+G FG +L TN+ +A K++ K + L ++D+ ++ R
Sbjct: 18 EDFELH----KMLGKGSFGKVFLAEFKKTNQFFAIKALKKD--VVLMDDDVECTMVEKRV 71
Query: 78 LYLSGQ-PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA-IVN 135
L L+ + P + T++ + + VME GGDL I + + AT A I+
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI-QSCHKFDLSRATFYAAEIIL 130
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV-YRDIVGSGFYIA 194
+ HS G+++RDLK +N I D + +K+ DFG G + G+ YIA
Sbjct: 131 GLQFLHSKGIVYRDLKLDN---ILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIA 187
Query: 195 PEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS-I 252
PE+L ++Y +D WS GV+LY +L G PF + ++ + + I D +P +
Sbjct: 188 PEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS-----IRMDNPFYPRWL 242
Query: 253 SSTAKDLVRRMLTKDPKRRI-TAAQVLEHPWLRE 285
AKDL+ ++ ++P++R+ + +HP RE
Sbjct: 243 EKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 276
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 131/283 (46%), Gaps = 37/283 (13%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA-----------------------EN 67
+G+G +GV L + N YA K ++KK +R A
Sbjct: 21 IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPI 80
Query: 68 DMIRREIQIRLYLSGQPNVVEFKSTYED--ETAVHVVMELCEGGDLFDRIIAKGYNSERD 125
+ + +EI I L PNVV+ +D E +++V EL G + + K SE
Sbjct: 81 EQVYQEIAILKKLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPL-SEDQ 138
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYR 184
A + ++ + H ++HRD+KP N + D + +K+ DFG + F+ +
Sbjct: 139 ARFYFQDLIKGIEYLHYQKIIHRDIKPSNL-LVGEDGH--IKIADFGVSNEFKGSDALLS 195
Query: 185 DIVGSGFYIAPEVL---RRRY-GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG 240
+ VG+ ++APE L R+ + GK +D+W+ GV LY + G PF E + I
Sbjct: 196 NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQ 255
Query: 241 EIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
++F P I+ KDL+ RML K+P+ RI ++ HPW+
Sbjct: 256 ALEFPDQP--DIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 133/271 (49%), Gaps = 29/271 (10%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM--IRREIQIRLYLSGQPNVVE 88
LG G +G Y T + A K + E+D+ I +EI I + P+VV+
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVP-------VESDLQEIIKEISI-MQQCDSPHVVK 88
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSMGVMH 147
+ +Y T + +VME C G + D I + +E + AT+L++ + + H M +H
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIH 148
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD-IVGSGFYIAPEVLRR-RYGKE 205
RD+K N ++ + +A K+ DFG A + R+ ++G+ F++APEV++ Y
Sbjct: 149 RDIKAGNI-LLNTEGHA--KLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCV 205
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI------SSTAKDL 259
DIWS G+ + G PP+ A+ ++ T+P P+ S D
Sbjct: 206 ADIWSLGITAIEMAEGKPPY-ADIHP------MRAIFMIPTNPPPTFRKPELWSDNFTDF 258
Query: 260 VRRMLTKDPKRRITAAQVLEHPWLRESGEAS 290
V++ L K P++R TA Q+L+HP++R + S
Sbjct: 259 VKQCLVKSPEQRATATQLLQHPFVRSAKGVS 289
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 121/273 (44%), Gaps = 22/273 (8%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRREIQIRLYL--- 80
Y G +LG+G FG + + A K I + + + +D + +++ L
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92
Query: 81 --SGQPNVVEFKSTYEDETAVHVVME-LCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
G P V+ +E + +V+E DLFD I KG E + +V A+
Sbjct: 93 AGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAI 152
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV 197
CHS GV+HRD+K EN R A K+ DFGS L + + Y D G+ Y PE
Sbjct: 153 QHCHSRGVVHRDIKDENILIDLRRGCA--KLIDFGSGALLHD-EPYTDFDGTRVYSPPEW 209
Query: 198 LRRR--YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST 255
+ R + +WS G++LY ++ G PF + + IL+ E+ F +S
Sbjct: 210 ISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILEAELHFPA----HVSPD 259
Query: 256 AKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288
L+RR L P R + ++L PW++ E
Sbjct: 260 CCALIRRCLAPKPSSRPSLEEILLDPWMQTPAE 292
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 122/238 (51%), Gaps = 22/238 (9%)
Query: 62 MRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET--AVHVVMELCEGGDLFDRIIAKG 119
M AE M+ E+ + L PN+V + D T +++VME CEGGDL +I KG
Sbjct: 44 MTEAEKQMLVSEVNLLRELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKG 101
Query: 120 YNSER--DAATVLRAIVN---AVNVCHSMG-----VMHRDLKPENFSFISRDDNALLKVT 169
+ D VLR + A+ CH V+HRDLKP N F+ N +K+
Sbjct: 102 TKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANV-FLDGKQN--VKLG 158
Query: 170 DFGSALLFEEGQVY-RDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWA 227
DFG A + + + ++ VG+ +Y++PE + R Y ++ DIWS G +LY L + +PPF A
Sbjct: 159 DFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA 218
Query: 228 ETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
++K I +G+ F P+ S +++ RML R + ++LE+P + E
Sbjct: 219 FSQKELAGKIREGK--FRRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 129/284 (45%), Gaps = 17/284 (5%)
Query: 15 GKAYEDVMLHYF-FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRRE 73
GKA + L F R++GRG + L T+R YA K + K+ + D ++ E
Sbjct: 11 GKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTE 70
Query: 74 IQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAI 133
+ S P +V S ++ E+ + V+E GGDL + + E A I
Sbjct: 71 KHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI 130
Query: 134 VNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL-FEEGQVYRDIVGSGFY 192
A+N H G+++RDLK +N + D +K+TD+G G G+ Y
Sbjct: 131 SLALNYLHERGIIYRDLKLDN---VLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNY 187
Query: 193 IAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPF-----WAETKKGTYDAILQGEIDFDT 246
IAPE+LR YG +D W+ GV+++ +++G PF + T D + Q ++
Sbjct: 188 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 247
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRITA------AQVLEHPWLR 284
S+S A +++ L KDPK R+ A + HP+ R
Sbjct: 248 RIPRSMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFR 291
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 120/238 (50%), Gaps = 22/238 (9%)
Query: 62 MRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET--AVHVVMELCEGGDLFDRIIAKG 119
M AE M+ E+ + L PN+V + D T +++VME CEGGDL +I KG
Sbjct: 44 MTEAEKQMLVSEVNLLRELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKG 101
Query: 120 -----YNSERDAATVLRAIVNAVNVCHSMG-----VMHRDLKPENFSFISRDDNALLKVT 169
Y E V+ + A+ CH V+HRDLKP N F+ N +K+
Sbjct: 102 TKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANV-FLDGKQN--VKLG 158
Query: 170 DFGSA-LLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWA 227
DFG A +L + + VG+ +Y++PE + R Y ++ DIWS G +LY L + +PPF A
Sbjct: 159 DFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA 218
Query: 228 ETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
++K I +G+ F P+ S +++ RML R + ++LE+P + E
Sbjct: 219 FSQKELAGKIREGK--FRRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 121/238 (50%), Gaps = 22/238 (9%)
Query: 62 MRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET--AVHVVMELCEGGDLFDRIIAKG 119
M AE M+ E+ + L PN+V + D T +++VME CEGGDL +I KG
Sbjct: 44 MTEAEKQMLVSEVNLLRELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKG 101
Query: 120 YNSER--DAATVLRAIVN---AVNVCHSMG-----VMHRDLKPENFSFISRDDNALLKVT 169
+ D VLR + A+ CH V+HRDLKP N F+ N +K+
Sbjct: 102 TKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANV-FLDGKQN--VKLG 158
Query: 170 DFGSA-LLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWA 227
DFG A +L + + VG+ +Y++PE + R Y ++ DIWS G +LY L + +PPF A
Sbjct: 159 DFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA 218
Query: 228 ETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
++K I +G+ F P+ S +++ RML R + ++LE+P + E
Sbjct: 219 FSQKELAGKIREGK--FRRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 129/284 (45%), Gaps = 17/284 (5%)
Query: 15 GKAYEDVMLHYF-FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRRE 73
GKA + L F R++GRG + L T+R YA + + K+ + D ++ E
Sbjct: 43 GKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTE 102
Query: 74 IQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAI 133
+ S P +V S ++ E+ + V+E GGDL + + E A I
Sbjct: 103 KHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI 162
Query: 134 VNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL-FEEGQVYRDIVGSGFY 192
A+N H G+++RDLK +N + D +K+TD+G G G+ Y
Sbjct: 163 SLALNYLHERGIIYRDLKLDN---VLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNY 219
Query: 193 IAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPF-----WAETKKGTYDAILQGEIDFDT 246
IAPE+LR YG +D W+ GV+++ +++G PF + T D + Q ++
Sbjct: 220 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 279
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRITA------AQVLEHPWLR 284
S+S A +++ L KDPK R+ A + HP+ R
Sbjct: 280 RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 323
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 124/273 (45%), Gaps = 24/273 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R++GRG + L T+R YA K + K+ + D ++ E + S P +V
Sbjct: 11 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 70
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
S ++ E+ + V+E GGDL + + E A I A+N H G+++R
Sbjct: 71 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR 130
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALL-FEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
DLK +N + D +K+TD+G G G+ YIAPE+LR YG +
Sbjct: 131 DLKLDN---VLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSV 187
Query: 207 DIWSAGVILYILLSGVPPF---------WAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
D W+ GV+++ +++G PF T+ + IL+ +I S+S A
Sbjct: 188 DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKAA 243
Query: 258 DLVRRMLTKDPKRRITA------AQVLEHPWLR 284
+++ L KDPK R+ A + HP+ R
Sbjct: 244 SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 276
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 128/267 (47%), Gaps = 18/267 (6%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR-LYLSGQPN 85
F +LG+G FG L T+ YA K + K + + ++D+ ++ R L L G+P
Sbjct: 24 FLMVLGKGSFGKVMLSERKGTDELYAVKILKKD--VVIQDDDVECTMVEKRVLALPGKPP 81
Query: 86 -VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
+ + S ++ ++ VME GGDL I G E A I + S G
Sbjct: 82 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG 141
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFGSALL-FEEGQVYRDIVGSGFYIAPEVLRRR-Y 202
+++RDLK +N + D +K+ DFG +G + G+ YIAPE++ + Y
Sbjct: 142 IIYRDLKLDN---VMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPY 198
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
GK +D W+ GV+LY +L+G PF E + + +I++ + + S+S A + +
Sbjct: 199 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKG 254
Query: 263 MLTKDPKRRITAA-----QVLEHPWLR 284
++TK P +R+ + EH + R
Sbjct: 255 LMTKHPGKRLGCGPEGERDIKEHAFFR 281
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 124/273 (45%), Gaps = 24/273 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R++GRG + L T+R YA K + K+ + D ++ E + S P +V
Sbjct: 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 74
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
S ++ E+ + V+E GGDL + + E A I A+N H G+++R
Sbjct: 75 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR 134
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALL-FEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
DLK +N + D +K+TD+G G G+ YIAPE+LR YG +
Sbjct: 135 DLKLDN---VLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSV 191
Query: 207 DIWSAGVILYILLSGVPPF---------WAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
D W+ GV+++ +++G PF T+ + IL+ +I S+S A
Sbjct: 192 DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKAA 247
Query: 258 DLVRRMLTKDPKRRITA------AQVLEHPWLR 284
+++ L KDPK R+ A + HP+ R
Sbjct: 248 SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 280
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 127/265 (47%), Gaps = 14/265 (5%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKP-KMRLAENDMIRREIQIRLYLSGQ-PNV 86
R++GRG FG Y C + T + YA K + KK KM+ E + I + L +G P +
Sbjct: 194 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 253
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V + + +++L GGDL + G SE D I+ + H+ V+
Sbjct: 254 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVV 313
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYGK 204
+RDLKP N I D++ ++++D G A F + + + VG+ Y+APEVL++ Y
Sbjct: 314 YRDLKPAN---ILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDS 369
Query: 205 EIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRML 264
D +S G +L+ LL G PF K ++ I + + + S S + L+ +L
Sbjct: 370 SADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLTMAVELPDSFSPELRSLLEGLL 428
Query: 265 TKDPKRRI-----TAAQVLEHPWLR 284
+D RR+ A +V E P+ R
Sbjct: 429 QRDVNRRLGCLGRGAQEVKESPFFR 453
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 128/267 (47%), Gaps = 18/267 (6%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR-LYLSGQPN 85
F +LG+G FG L T+ YA K + K + + ++D+ ++ R L L G+P
Sbjct: 345 FLMVLGKGSFGKVMLSERKGTDELYAVKILKKD--VVIQDDDVECTMVEKRVLALPGKPP 402
Query: 86 -VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
+ + S ++ ++ VME GGDL I G E A I + S G
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG 462
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFGSALL-FEEGQVYRDIVGSGFYIAPEVLR-RRY 202
+++RDLK +N + D +K+ DFG +G + G+ YIAPE++ + Y
Sbjct: 463 IIYRDLKLDN---VMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPY 519
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
GK +D W+ GV+LY +L+G PF E + + +I++ + + S+S A + +
Sbjct: 520 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKG 575
Query: 263 MLTKDPKRRITAA-----QVLEHPWLR 284
++TK P +R+ + EH + R
Sbjct: 576 LMTKHPGKRLGCGPEGERDIKEHAFFR 602
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 127/265 (47%), Gaps = 14/265 (5%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKP-KMRLAENDMIRREIQIRLYLSGQ-PNV 86
R++GRG FG Y C + T + YA K + KK KM+ E + I + L +G P +
Sbjct: 195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 254
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V + + +++L GGDL + G SE D I+ + H+ V+
Sbjct: 255 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVV 314
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYGK 204
+RDLKP N I D++ ++++D G A F + + + VG+ Y+APEVL++ Y
Sbjct: 315 YRDLKPAN---ILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDS 370
Query: 205 EIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRML 264
D +S G +L+ LL G PF K ++ I + + + S S + L+ +L
Sbjct: 371 SADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLTMAVELPDSFSPELRSLLEGLL 429
Query: 265 TKDPKRRI-----TAAQVLEHPWLR 284
+D RR+ A +V E P+ R
Sbjct: 430 QRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 127/265 (47%), Gaps = 14/265 (5%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKP-KMRLAENDMIRREIQIRLYLSGQ-PNV 86
R++GRG FG Y C + T + YA K + KK KM+ E + I + L +G P +
Sbjct: 195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 254
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V + + +++L GGDL + G SE D I+ + H+ V+
Sbjct: 255 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVV 314
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYGK 204
+RDLKP N I D++ ++++D G A F + + + VG+ Y+APEVL++ Y
Sbjct: 315 YRDLKPAN---ILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDS 370
Query: 205 EIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRML 264
D +S G +L+ LL G PF K ++ I + + + S S + L+ +L
Sbjct: 371 SADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLTMAVELPDSFSPELRSLLEGLL 429
Query: 265 TKDPKRRI-----TAAQVLEHPWLR 284
+D RR+ A +V E P+ R
Sbjct: 430 QRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 127/265 (47%), Gaps = 14/265 (5%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKP-KMRLAENDMIRREIQIRLYLSGQ-PNV 86
R++GRG FG Y C + T + YA K + KK KM+ E + I + L +G P +
Sbjct: 195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 254
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V + + +++L GGDL + G SE D I+ + H+ V+
Sbjct: 255 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVV 314
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYGK 204
+RDLKP N I D++ ++++D G A F + + + VG+ Y+APEVL++ Y
Sbjct: 315 YRDLKPAN---ILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDS 370
Query: 205 EIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRML 264
D +S G +L+ LL G PF K ++ I + + + S S + L+ +L
Sbjct: 371 SADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLTMAVELPDSFSPELRSLLEGLL 429
Query: 265 TKDPKRRI-----TAAQVLEHPWLR 284
+D RR+ A +V E P+ R
Sbjct: 430 QRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 81 SGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATVLRAIVNAVNV 139
SG V+ +E + +++E E DLFD I +G E A + ++ AV
Sbjct: 113 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 172
Query: 140 CHSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
CH+ GV+HRD+K EN ++R + LK+ DFGS L ++ VY D G+ Y PE +
Sbjct: 173 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWI 228
Query: 199 R--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256
R R +G+ +WS G++LY ++ G PF + + I++G++ F +SS
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQ----RVSSEC 278
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+R L P R T ++ HPW+++
Sbjct: 279 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 135/274 (49%), Gaps = 13/274 (4%)
Query: 19 EDVML-HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR 77
EDV H+ R +G+G FG + +N T + YA K + K+ + E + +E+QI
Sbjct: 10 EDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIM 69
Query: 78 LYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L P +V +++DE + +V++L GGDL + + E + +V A+
Sbjct: 70 QGLE-HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMAL 128
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPE 196
+ + ++HRD+KP+N I D++ + +TDF +A+L E Q+ + G+ Y+APE
Sbjct: 129 DYLQNQRIIHRDMKPDN---ILLDEHGHVHITDFNIAAMLPRETQI-TTMAGTKPYMAPE 184
Query: 197 VLRRR----YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252
+ R Y +D WS GV Y LL G P+ + + + + E T P +
Sbjct: 185 MFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP-SAW 243
Query: 253 SSTAKDLVRRMLTKDPKRRITA-AQVLEHPWLRE 285
S L++++L +P +R + + V P++ +
Sbjct: 244 SQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMND 277
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 142/283 (50%), Gaps = 27/283 (9%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G+G FG + +N T + A K I + E + I++EI + L P V ++
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLE--EAEDEIEDIQQEITV-LSQCDSPYVTKYY 71
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
+Y +T + ++ME GG D ++ G E AT+LR I+ ++ HS +HRD+
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDI 130
Query: 151 KPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD-IVGSGFYIAPEVLRRR-YGKEIDI 208
K N + ++ +K+ DFG A + Q+ R+ VG+ F++APEV+++ Y + DI
Sbjct: 131 KAAN---VLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADI 187
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDF---DTDPWPSI----SSTAKDLVR 261
WS G+ L G PP + + ++ F +P P++ S K+ V
Sbjct: 188 WSLGITAIELARGEPP---------HSELHPMKVLFLIPKNNP-PTLEGNYSKPLKEFVE 237
Query: 262 RMLTKDPKRRITAAQVLEHPW-LRESGEASDDTSVILRMKQFR 303
L K+P R TA ++L+H + LR + + S T +I R K+++
Sbjct: 238 ACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRWK 280
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 142/283 (50%), Gaps = 27/283 (9%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G+G FG + +N T + A K I + E + I++EI + L P V ++
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLE--EAEDEIEDIQQEITV-LSQCDSPYVTKYY 71
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
+Y +T + ++ME GG D ++ G E AT+LR I+ ++ HS +HRD+
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDI 130
Query: 151 KPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD-IVGSGFYIAPEVLRRR-YGKEIDI 208
K N + ++ +K+ DFG A + Q+ R+ VG+ F++APEV+++ Y + DI
Sbjct: 131 KAAN---VLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADI 187
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDF---DTDPWPSI----SSTAKDLVR 261
WS G+ L G PP + + ++ F +P P++ S K+ V
Sbjct: 188 WSLGITAIELARGEPP---------HSELHPMKVLFLIPKNNP-PTLEGNYSKPLKEFVE 237
Query: 262 RMLTKDPKRRITAAQVLEHPW-LRESGEASDDTSVILRMKQFR 303
L K+P R TA ++L+H + LR + + S T +I R K+++
Sbjct: 238 ACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRWK 280
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 142/283 (50%), Gaps = 27/283 (9%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G+G FG + +N T + A K I + E + I++EI + L P V ++
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLE--EAEDEIEDIQQEITV-LSQCDSPYVTKYY 86
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
+Y +T + ++ME GG D ++ G E AT+LR I+ ++ HS +HRD+
Sbjct: 87 GSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDI 145
Query: 151 KPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD-IVGSGFYIAPEVLRRR-YGKEIDI 208
K N + ++ +K+ DFG A + Q+ R+ VG+ F++APEV+++ Y + DI
Sbjct: 146 KAAN---VLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADI 202
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDF---DTDPWPSI----SSTAKDLVR 261
WS G+ L G PP + + ++ F +P P++ S K+ V
Sbjct: 203 WSLGITAIELARGEPP---------HSELHPMKVLFLIPKNNP-PTLEGNYSKPLKEFVE 252
Query: 262 RMLTKDPKRRITAAQVLEHPW-LRESGEASDDTSVILRMKQFR 303
L K+P R TA ++L+H + LR + + S T +I R K+++
Sbjct: 253 ACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRWK 295
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 118/272 (43%), Gaps = 19/272 (6%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LG G YL + N A K+I P+ + RE+ LS Q N+V
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQ-NIVSMI 77
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
E++ ++VME EG L + I + G S A I++ + H M ++HRD+
Sbjct: 78 DVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDI 137
Query: 151 KPENFSFISRDDNALLKVTDFGSALLFEEGQVYR--DIVGSGFYIAPEVLRRRYGKE-ID 207
KP+N I D N LK+ DFG A E + + ++G+ Y +PE + E D
Sbjct: 138 KPQN---ILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTD 194
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI-DFDTDPWPSISSTAKDLVRRMLTK 266
I+S G++LY +L G PPF ET +Q + + TD I + +++ R K
Sbjct: 195 IYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEK 254
Query: 267 DPKRRITAAQVLEHPWLRESGEASDDTSVILR 298
D R Q E DD S +L
Sbjct: 255 DKANRYKTIQ-----------EMKDDLSSVLH 275
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 132/300 (44%), Gaps = 66/300 (22%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEND-----MIRREIQIRLYLSGQPN 85
+G G +GV Y +N+ +A K K+RL + D REI I L N
Sbjct: 10 IGEGTYGVVY-KAQNNYGETFALK------KIRLEKEDEGIPSTTIREISILKELK-HSN 61
Query: 86 VVEFKSTYEDETAVHVVME-----------LCEGGDLFDRIIAKGYNSERDAATVLRAIV 134
+V+ + + +V E +CEGG + + AK + L ++
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKSF---------LLQLL 110
Query: 135 NAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYI 193
N + CH V+HRDLKP+N I+R+ LK+ DFG A F + Y V + +Y
Sbjct: 111 NGIAYCHDRRVLHRDLKPQNL-LINREGE--LKIADFGLARAFGIPVRKYTHEVVTLWYR 167
Query: 194 APEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251
AP+VL ++Y IDIWS G I +++G P F ++ I + ++ WP+
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPN 227
Query: 252 ISSTAK-------------------------DLVRRMLTKDPKRRITAAQVLEHPWLRES 286
++ K DL+ +ML DP +RITA Q LEH + +E+
Sbjct: 228 VTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 132/300 (44%), Gaps = 66/300 (22%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEND-----MIRREIQIRLYLSGQPN 85
+G G +GV Y +N+ +A K K+RL + D REI I L N
Sbjct: 10 IGEGTYGVVY-KAQNNYGETFALK------KIRLEKEDEGIPSTTIREISILKELK-HSN 61
Query: 86 VVEFKSTYEDETAVHVVME-----------LCEGGDLFDRIIAKGYNSERDAATVLRAIV 134
+V+ + + +V E +CEGG + + AK + L ++
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKSF---------LLQLL 110
Query: 135 NAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYI 193
N + CH V+HRDLKP+N I+R+ LK+ DFG A F + Y V + +Y
Sbjct: 111 NGIAYCHDRRVLHRDLKPQNL-LINREGE--LKIADFGLARAFGIPVRKYTHEVVTLWYR 167
Query: 194 APEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251
AP+VL ++Y IDIWS G I +++G P F ++ I + ++ WP+
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPN 227
Query: 252 ISSTAK-------------------------DLVRRMLTKDPKRRITAAQVLEHPWLRES 286
++ K DL+ +ML DP +RITA Q LEH + +E+
Sbjct: 228 VTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 132/300 (44%), Gaps = 66/300 (22%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEND-----MIRREIQIRLYLSGQPN 85
+G G +GV Y +N+ +A K K+RL + D REI I L N
Sbjct: 10 IGEGTYGVVY-KAQNNYGETFALK------KIRLEKEDEGIPSTTIREISILKELK-HSN 61
Query: 86 VVEFKSTYEDETAVHVVME-----------LCEGGDLFDRIIAKGYNSERDAATVLRAIV 134
+V+ + + +V E +CEGG + + AK + L ++
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKSF---------LLQLL 110
Query: 135 NAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYI 193
N + CH V+HRDLKP+N I+R+ LK+ DFG A F + Y + + +Y
Sbjct: 111 NGIAYCHDRRVLHRDLKPQNL-LINREGE--LKIADFGLARAFGIPVRKYTHEIVTLWYR 167
Query: 194 APEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251
AP+VL ++Y IDIWS G I +++G P F ++ I + ++ WP+
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPN 227
Query: 252 ISSTAK-------------------------DLVRRMLTKDPKRRITAAQVLEHPWLRES 286
++ K DL+ +ML DP +RITA Q LEH + +E+
Sbjct: 228 VTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 129/308 (41%), Gaps = 52/308 (16%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89
+LG G +GV T T A K I K A + REI+I + + + F
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL--REIKILKHFKHENIITIF 75
Query: 90 K----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
++E+ V+++ EL + R+I+ S+ + + AV V H V
Sbjct: 76 NIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNV 133
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV-----------YRDIVGSGFYIA 194
+HRDLKP N + N LKV DFG A + +E + V + +Y A
Sbjct: 134 IHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRA 190
Query: 195 PEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAI--LQGEIDFDTD--- 247
PEV+ +Y + +D+WS G IL L P F + I + G D D
Sbjct: 191 PEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRC 250
Query: 248 ---P--------------------WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
P +P ++ DL++RML DP +RITA + LEHP+L+
Sbjct: 251 IESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQ 310
Query: 285 ESGEASDD 292
+ +D+
Sbjct: 311 TYHDPNDE 318
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 129/308 (41%), Gaps = 52/308 (16%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89
+LG G +GV T T A K I K A + REI+I + + + F
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL--REIKILKHFKHENIITIF 75
Query: 90 K----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
++E+ V+++ EL + R+I+ S+ + + AV V H V
Sbjct: 76 NIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNV 133
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV-----------YRDIVGSGFYIA 194
+HRDLKP N + N LKV DFG A + +E + V + +Y A
Sbjct: 134 IHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRA 190
Query: 195 PEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAI--LQGEIDFDTD--- 247
PEV+ +Y + +D+WS G IL L P F + I + G D D
Sbjct: 191 PEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRC 250
Query: 248 ---P--------------------WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
P +P ++ DL++RML DP +RITA + LEHP+L+
Sbjct: 251 IESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQ 310
Query: 285 ESGEASDD 292
+ +D+
Sbjct: 311 TYHDPNDE 318
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 129/308 (41%), Gaps = 52/308 (16%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89
+LG G +GV T T A K I K A + REI+I + + + F
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL--REIKILKHFKHENIITIF 75
Query: 90 K----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
++E+ V+++ EL + R+I+ S+ + + AV V H V
Sbjct: 76 NIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNV 133
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV-----------YRDIVGSGFYIA 194
+HRDLKP N + N LKV DFG A + +E + V + +Y A
Sbjct: 134 IHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRA 190
Query: 195 PEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAI--LQGEIDFDTD--- 247
PEV+ +Y + +D+WS G IL L P F + I + G D D
Sbjct: 191 PEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRC 250
Query: 248 ---P--------------------WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
P +P ++ DL++RML DP +RITA + LEHP+L+
Sbjct: 251 IESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQ 310
Query: 285 ESGEASDD 292
+ +D+
Sbjct: 311 TYHDPNDE 318
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 135/278 (48%), Gaps = 17/278 (6%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G+G FG Y +N T A K I + E + I++EI + L P + +
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLE--EAEDEIEDIQQEITV-LSQCDSPYITRYF 83
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
+Y T + ++ME GG D ++ G E AT+LR I+ ++ HS +HRD+
Sbjct: 84 GSYLKSTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLHSERKIHRDI 142
Query: 151 KPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD-IVGSGFYIAPEVLRRR-YGKEIDI 208
K N + D +K+ DFG A + Q+ R+ VG+ F++APEV+++ Y + DI
Sbjct: 143 KAANVLLSEQGD---VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADI 199
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPW--PSISSTAKDLVRRMLTK 266
WS G+ L G PP + + I ++ P S K+ V L K
Sbjct: 200 WSLGITAIELAKGEPP-----NSDLHPMRVLFLIPKNSPPTLEGQHSKPFKEFVEACLNK 254
Query: 267 DPKRRITAAQVLEHPWL-RESGEASDDTSVILRMKQFR 303
DP+ R TA ++L+H ++ R + + S T +I R K+++
Sbjct: 255 DPRFRPTAKELLKHKFITRYTKKTSFLTELIDRYKRWK 292
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 137/276 (49%), Gaps = 27/276 (9%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G+G FG + +N T + A K I + E + I++EI + L P V ++
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLE--EAEDEIEDIQQEITV-LSQCDSPYVTKYY 91
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
+Y +T + ++ME GG D ++ G E AT+LR I+ ++ HS +HRD+
Sbjct: 92 GSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDI 150
Query: 151 KPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD-IVGSGFYIAPEVLRRR-YGKEIDI 208
K N + ++ +K+ DFG A + Q+ R+ VG+ F++APEV+++ Y + DI
Sbjct: 151 KAAN---VLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADI 207
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDF---DTDPWPSI----SSTAKDLVR 261
WS G+ L G PP + + ++ F +P P++ S K+ V
Sbjct: 208 WSLGITAIELARGEPP---------HSELHPMKVLFLIPKNNP-PTLEGNYSKPLKEFVE 257
Query: 262 RMLTKDPKRRITAAQVLEHPW-LRESGEASDDTSVI 296
L K+P R TA ++L+H + LR + + S T +I
Sbjct: 258 ACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELI 293
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 129/291 (44%), Gaps = 37/291 (12%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89
++G G +G+ C T R A K + ++ + + REI++ L + N+V
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKK-IAMREIKLLKQLRHE-NLVNL 89
Query: 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRD 149
+ + ++V E + L D + + L I+N + CHS ++HRD
Sbjct: 90 LEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRD 149
Query: 150 LKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYRDIVGSGFYIAPEVL--RRRYGKEI 206
+KPEN I + ++K+ DFG A L G+VY D V + +Y APE+L +YGK +
Sbjct: 150 IKPEN---ILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAV 206
Query: 207 DIWSAGVILYILLSGVPPFWAET------------------------KKGTYDAILQGEI 242
D+W+ G ++ + G P F ++ K + + EI
Sbjct: 207 DVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEI 266
Query: 243 DFDTDP----WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEA 289
+ +P +P +S DL ++ L DP +R A++L H + + G A
Sbjct: 267 K-EREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFA 316
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 121/248 (48%), Gaps = 40/248 (16%)
Query: 68 DMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFD---RIIAKGYNS-- 122
D + +EIQ + PN+V + +++ + + +VM+L GG + D I+AKG +
Sbjct: 58 DELLKEIQ-AMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSG 116
Query: 123 ---ERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFE 178
E AT+LR ++ + H G +HRD+K N I ++ +++ DFG SA L
Sbjct: 117 VLDESTIATILREVLEGLEYLHKNGQIHRDVKAGN---ILLGEDGSVQIADFGVSAFLAT 173
Query: 179 EGQVYRD-----IVGSGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKK 231
G + R+ VG+ ++APEV+ R Y + DIWS G+ L +G P+
Sbjct: 174 GGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY------ 227
Query: 232 GTYDAILQGEIDFDTDPWPSISSTAKD-------------LVRRMLTKDPKRRITAAQVL 278
Y + + DP PS+ + +D ++ L KDP++R TAA++L
Sbjct: 228 HKYPPMKVLMLTLQNDP-PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
Query: 279 EHPWLRES 286
H + +++
Sbjct: 287 RHKFFQKA 294
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 121/248 (48%), Gaps = 40/248 (16%)
Query: 68 DMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFD---RIIAKGYNS-- 122
D + +EIQ + PN+V + +++ + + +VM+L GG + D I+AKG +
Sbjct: 53 DELLKEIQ-AMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSG 111
Query: 123 ---ERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFE 178
E AT+LR ++ + H G +HRD+K N I ++ +++ DFG SA L
Sbjct: 112 VLDESTIATILREVLEGLEYLHKNGQIHRDVKAGN---ILLGEDGSVQIADFGVSAFLAT 168
Query: 179 EGQVYRD-----IVGSGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKK 231
G + R+ VG+ ++APEV+ R Y + DIWS G+ L +G P+
Sbjct: 169 GGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY------ 222
Query: 232 GTYDAILQGEIDFDTDPWPSISSTAKD-------------LVRRMLTKDPKRRITAAQVL 278
Y + + DP PS+ + +D ++ L KDP++R TAA++L
Sbjct: 223 HKYPPMKVLMLTLQNDP-PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
Query: 279 EHPWLRES 286
H + +++
Sbjct: 282 RHKFFQKA 289
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 153/356 (42%), Gaps = 56/356 (15%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +G+ +N A K I+ + + REI+I L + N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL--REIKILLRFRHE-NIIGIN 87
Query: 91 -----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
T E V++V +L E DL+ +++ + S L I+ + HS V
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 145
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR----DIVGSGFYIAPEVL--R 199
+HRDLKP N + D LK+ DFG A + + + + V + +Y APE++
Sbjct: 146 LHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL-------QGEIDFDTD----- 247
+ Y K IDIWS G IL +LS P F + + IL Q +++ +
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 262
Query: 248 -----------PW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
PW P+ S A DL+ +MLT +P +RI Q L HP+L + + SD+
Sbjct: 263 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 322
Query: 293 TSVILRMKQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDEL 348
K ++ L K +K ++ EET + + ++G L DEL
Sbjct: 323 PIAEAPFKFDMELDDLPKEKLKELIF----EETARFQPGY------RSGDLGSDEL 368
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 132/300 (44%), Gaps = 46/300 (15%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +G+ +N A K I+ + + REI+I L + N++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL--REIKILLAFRHE-NIIGIN 89
Query: 91 -----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
T E V++V +L E DL+ +++ + S L I+ + HS V
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 147
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY----RDIVGSGFYIAPEVL--R 199
+HRDLKP N + D LK+ DFG A + + + + V + +Y APE++
Sbjct: 148 LHRDLKPSNLLLNTTSD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL-------QGEIDFDTD----- 247
+ Y K IDIWS G IL +LS P F + + IL Q +++ +
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARN 264
Query: 248 -----------PW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
PW P+ S A DL+ +MLT +P +RI Q L HP+L + + SD+
Sbjct: 265 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDPSDE 324
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 132/300 (44%), Gaps = 46/300 (15%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +G+ +N A K I+ + + REI+I L + N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL--REIKILLRFRHE-NIIGIN 87
Query: 91 -----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
T E V++V +L E DL+ +++ + S L I+ + HS V
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 145
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR----DIVGSGFYIAPEVL--R 199
+HRDLKP N + D LK+ DFG A + + + + V + +Y APE++
Sbjct: 146 LHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL-------QGEIDFDTD----- 247
+ Y K IDIWS G IL +LS P F + + IL Q +++ +
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARN 262
Query: 248 -----------PW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
PW P+ S A DL+ +MLT +P +RI Q L HP+L + + SD+
Sbjct: 263 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 322
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 132/300 (44%), Gaps = 46/300 (15%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +G+ +N A K I+ + + REI+I L + N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL--REIKILLRFRHE-NIIGIN 87
Query: 91 -----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
T E V++V +L E DL+ +++ + S L I+ + HS V
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 145
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR----DIVGSGFYIAPEVL--R 199
+HRDLKP N + D LK+ DFG A + + + + V + +Y APE++
Sbjct: 146 LHRDLKPSNLLLNTTXD---LKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL-------QGEIDFDTD----- 247
+ Y K IDIWS G IL +LS P F + + IL Q +++ +
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARN 262
Query: 248 -----------PW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
PW P+ S A DL+ +MLT +P +RI Q L HP+L + + SD+
Sbjct: 263 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 322
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 132/300 (44%), Gaps = 46/300 (15%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +G+ +N A K I+ + + REI+I L + N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL--REIKILLRFRHE-NIIGIN 87
Query: 91 -----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
T E V++V +L E DL+ +++ + S L I+ + HS V
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 145
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR----DIVGSGFYIAPEVL--R 199
+HRDLKP N + D LK+ DFG A + + + + V + +Y APE++
Sbjct: 146 LHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL-------QGEIDFDTD----- 247
+ Y K IDIWS G IL +LS P F + + IL Q +++ +
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 262
Query: 248 -----------PW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
PW P+ S A DL+ +MLT +P +RI Q L HP+L + + SD+
Sbjct: 263 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 322
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 119/290 (41%), Gaps = 46/290 (15%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIR-----REIQIRLYLSGQPN 85
LG G +G Y + TN A K I + + IR +E+Q R N
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR-------N 94
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
++E KS +H++ E E DL + S R + L ++N VN CHS
Sbjct: 95 IIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRC 153
Query: 146 MHRDLKPENFSFISRD--DNALLKVTDFGSALLF--EEGQVYRDIVGSGFYIAPEVL--R 199
+HRDLKP+N D + +LK+ DFG A F Q +I+ + +Y PE+L
Sbjct: 154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-TLWYRPPEILLGS 212
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---- 255
R Y +DIWS I +L P F +++ I + D WP +++
Sbjct: 213 RHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWK 272
Query: 256 -------AKDLVR---------------RMLTKDPKRRITAAQVLEHPWL 283
K L R ML DP +RI+A LEHP+
Sbjct: 273 QSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYF 322
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 131/300 (43%), Gaps = 46/300 (15%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +G+ +N A K I+ + + REI+I L + N++
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL--REIKILLRFRHE-NIIGIN 107
Query: 91 -----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
T E V++V L G DL+ +++ + S L I+ + HS V
Sbjct: 108 DIIRAPTIEQMKDVYLVTHLM-GADLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 165
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR----DIVGSGFYIAPEVL--R 199
+HRDLKP N + D LK+ DFG A + + + + V + +Y APE++
Sbjct: 166 LHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL-------QGEIDFDTD----- 247
+ Y K IDIWS G IL +LS P F + + IL Q +++ +
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 282
Query: 248 -----------PW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
PW P+ S A DL+ +MLT +P +RI Q L HP+L + + SD+
Sbjct: 283 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 342
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 135/284 (47%), Gaps = 30/284 (10%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA--ENDMIRREIQI 76
ED L + R+LGRG FG + C +T + YACK + KK + + M+ ++I
Sbjct: 184 EDWFLDF---RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 77 RLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERD--------AAT 128
+++ +V +E +T + +VM + GGD+ I YN + D A
Sbjct: 241 KVH---SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHI----YNVDEDNPGFQEPRAIF 293
Query: 129 VLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV-YRDIV 187
IV+ + H +++RDLKPEN + DD+ ++++D G A+ + GQ +
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPEN---VLLDDDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 188 GSGFYIAPE-VLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246
G+ ++APE +L Y +D ++ GV LY +++ PF A +K + Q ++
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAV 410
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRI-----TAAQVLEHPWLRE 285
S +KD +L KDP++R+ + + HP R+
Sbjct: 411 TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 135/284 (47%), Gaps = 30/284 (10%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA--ENDMIRREIQI 76
ED L + R+LGRG FG + C +T + YACK + KK + + M+ ++I
Sbjct: 184 EDWFLDF---RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 77 RLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERD--------AAT 128
+++ +V +E +T + +VM + GGD+ I YN + D A
Sbjct: 241 KVH---SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHI----YNVDEDNPGFQEPRAIF 293
Query: 129 VLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV-YRDIV 187
IV+ + H +++RDLKPEN + DD+ ++++D G A+ + GQ +
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPEN---VLLDDDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 188 GSGFYIAPE-VLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246
G+ ++APE +L Y +D ++ GV LY +++ PF A +K + Q ++
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAV 410
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRI-----TAAQVLEHPWLRE 285
S +KD +L KDP++R+ + + HP R+
Sbjct: 411 TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 135/284 (47%), Gaps = 30/284 (10%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA--ENDMIRREIQI 76
ED L + R+LGRG FG + C +T + YACK + KK + + M+ ++I
Sbjct: 184 EDWFLDF---RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 77 RLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERD--------AAT 128
+++ +V +E +T + +VM + GGD+ I YN + D A
Sbjct: 241 KVH---SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHI----YNVDEDNPGFQEPRAIF 293
Query: 129 VLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV-YRDIV 187
IV+ + H +++RDLKPEN + DD+ ++++D G A+ + GQ +
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPEN---VLLDDDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 188 GSGFYIAPE-VLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246
G+ ++APE +L Y +D ++ GV LY +++ PF A +K + Q ++
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAV 410
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRI-----TAAQVLEHPWLRE 285
S +KD +L KDP++R+ + + HP R+
Sbjct: 411 TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 135/284 (47%), Gaps = 30/284 (10%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA--ENDMIRREIQI 76
ED L + R+LGRG FG + C +T + YACK + KK + + M+ ++I
Sbjct: 184 EDWFLDF---RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 77 RLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERD--------AAT 128
+++ +V +E +T + +VM + GGD+ I YN + D A
Sbjct: 241 KVH---SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHI----YNVDEDNPGFQEPRAIF 293
Query: 129 VLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV-YRDIV 187
IV+ + H +++RDLKPEN + DD+ ++++D G A+ + GQ +
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPEN---VLLDDDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 188 GSGFYIAPE-VLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246
G+ ++APE +L Y +D ++ GV LY +++ PF A +K + Q ++
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAV 410
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRI-----TAAQVLEHPWLRE 285
S +KD +L KDP++R+ + + HP R+
Sbjct: 411 TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 128/290 (44%), Gaps = 37/290 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKK----------PKMRLAENDMIRREIQIRLYL 80
LG G FG + + N+ K I K+ PK+ + EI I L
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKL-----GKVTLEIAI-LSR 85
Query: 81 SGQPNVVEFKSTYEDETAVHVVMELCEGG-DLFDRIIAKGYNSERDAATVLRAIVNAVNV 139
N+++ +E++ +VME G DLF I E A+ + R +V+AV
Sbjct: 86 VEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGY 145
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL- 198
++HRD+K EN I ++ +K+ DFGSA E G+++ G+ Y APEVL
Sbjct: 146 LRLKDIIHRDIKDEN---IVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLM 202
Query: 199 -RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
G E+++WS GV LY L+ PF L+ ++ P +S
Sbjct: 203 GNPYRGPELEMWSLGVTLYTLVFEENPF----------CELEETVEAAIHPPYLVSKELM 252
Query: 258 DLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMNK 307
LV +L P+RR T +++ PW+ + +D T ++ R+NK
Sbjct: 253 SLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLADYT-----WEEVFRVNK 297
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 121/272 (44%), Gaps = 24/272 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++GRG F + T + YA K + K ++ E R E + L + + +
Sbjct: 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDV-LVNGDRRWITQ 125
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATV-LRAIVNAVNVCHSMGVMH 147
++DE +++VME GGDL + G + A L IV A++ H +G +H
Sbjct: 126 LHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVH 185
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF--YIAPEVLR------ 199
RD+KP+N I D +++ DFGS L R +V G Y++PE+L+
Sbjct: 186 RDIKPDN---ILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGP 242
Query: 200 --RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP----SIS 253
YG E D W+ GV Y + G PF+A++ TY I+ + P +
Sbjct: 243 GTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSL---PLVDEGVP 299
Query: 254 STAKDLVRRMLTKDPKR--RITAAQVLEHPWL 283
A+D ++R+L R R A HP+
Sbjct: 300 EEARDFIQRLLCPPETRLGRGGAGDFRTHPFF 331
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 132/300 (44%), Gaps = 46/300 (15%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +G+ +N A K I+ + + REI+I L + N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL--REIKILLRFRHE-NIIGIN 91
Query: 91 -----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
T E V++V +L E DL+ +++ + S L I+ + HS V
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR----DIVGSGFYIAPEVL--R 199
+HRDLKP N + D LK+ DFG A + + + + V + +Y APE++
Sbjct: 150 LHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL-------QGEIDFDTD----- 247
+ Y K IDIWS G IL +LS P F + + IL Q +++ +
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 266
Query: 248 -----------PW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
PW P+ S A DL+ +MLT +P +RI Q L HP+L + + SD+
Sbjct: 267 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 326
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 132/300 (44%), Gaps = 46/300 (15%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +G+ +N A K I+ + + REI+I L + N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL--REIKILLRFRHE-NIIGIN 87
Query: 91 -----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
T E V++V +L E DL+ +++ + S L I+ + HS V
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 145
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR----DIVGSGFYIAPEVL--R 199
+HRDLKP N + D LK+ DFG A + + + + V + +Y APE++
Sbjct: 146 LHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL-------QGEIDFDTD----- 247
+ Y K IDIWS G IL +LS P F + + IL Q +++ +
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 262
Query: 248 -----------PW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
PW P+ S A DL+ +MLT +P +RI Q L HP+L + + SD+
Sbjct: 263 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 322
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 132/300 (44%), Gaps = 46/300 (15%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +G+ +N A K I+ + + REI+I L + N++
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL--REIKILLRFRHE-NIIGIN 95
Query: 91 -----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
T E V++V +L E DL+ +++ + S L I+ + HS V
Sbjct: 96 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 153
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR----DIVGSGFYIAPEVL--R 199
+HRDLKP N + D LK+ DFG A + + + + V + +Y APE++
Sbjct: 154 LHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 210
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL-------QGEIDFDTD----- 247
+ Y K IDIWS G IL +LS P F + + IL Q +++ +
Sbjct: 211 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 270
Query: 248 -----------PW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
PW P+ S A DL+ +MLT +P +RI Q L HP+L + + SD+
Sbjct: 271 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 330
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 132/300 (44%), Gaps = 46/300 (15%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +G+ +N A K I+ + + REI+I L + N++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL--REIKILLRFRHE-NIIGIN 89
Query: 91 -----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
T E V++V +L E DL+ +++ + S L I+ + HS V
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 147
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR----DIVGSGFYIAPEVL--R 199
+HRDLKP N + D LK+ DFG A + + + + V + +Y APE++
Sbjct: 148 LHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL-------QGEIDFDTD----- 247
+ Y K IDIWS G IL +LS P F + + IL Q +++ +
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 264
Query: 248 -----------PW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
PW P+ S A DL+ +MLT +P +RI Q L HP+L + + SD+
Sbjct: 265 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 324
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 132/300 (44%), Gaps = 46/300 (15%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +G+ +N A K I+ + + REI+I L + N++
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL--REIKILLRFRHE-NIIGIN 85
Query: 91 -----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
T E V++V +L E DL+ +++ + S L I+ + HS V
Sbjct: 86 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 143
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR----DIVGSGFYIAPEVL--R 199
+HRDLKP N + D LK+ DFG A + + + + V + +Y APE++
Sbjct: 144 LHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL-------QGEIDFDTD----- 247
+ Y K IDIWS G IL +LS P F + + IL Q +++ +
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARN 260
Query: 248 -----------PW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
PW P+ S A DL+ +MLT +P +RI Q L HP+L + + SD+
Sbjct: 261 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 320
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 132/300 (44%), Gaps = 46/300 (15%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +G+ +N A K I+ + + REI+I L + N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTL--REIKILLRFRHE-NIIGIN 91
Query: 91 -----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
T E V++V +L E DL+ +++ + S L I+ + HS V
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR----DIVGSGFYIAPEVL--R 199
+HRDLKP N + D LK+ DFG A + + + + V + +Y APE++
Sbjct: 150 LHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL-------QGEIDFDTD----- 247
+ Y K IDIWS G IL +LS P F + + IL Q +++ +
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 266
Query: 248 -----------PW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
PW P+ S A DL+ +MLT +P +RI Q L HP+L + + SD+
Sbjct: 267 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 326
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 132/300 (44%), Gaps = 46/300 (15%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +G+ +N A K I+ + + REI+I L + N++
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL--REIKILLRFRHE-NIIGIN 107
Query: 91 -----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
T E V++V +L E DL+ +++ + S L I+ + HS V
Sbjct: 108 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 165
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR----DIVGSGFYIAPEVL--R 199
+HRDLKP N + D LK+ DFG A + + + + V + +Y APE++
Sbjct: 166 LHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL-------QGEIDFDTD----- 247
+ Y K IDIWS G IL +LS P F + + IL Q +++ +
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 282
Query: 248 -----------PW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
PW P+ S A DL+ +MLT +P +RI Q L HP+L + + SD+
Sbjct: 283 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 342
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 132/300 (44%), Gaps = 46/300 (15%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +G+ +N A K I+ + + REI+I L + N++
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL--REIKILLRFRHE-NIIGIN 85
Query: 91 -----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
T E V++V +L E DL+ +++ + S L I+ + HS V
Sbjct: 86 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 143
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR----DIVGSGFYIAPEVL--R 199
+HRDLKP N + D LK+ DFG A + + + + V + +Y APE++
Sbjct: 144 LHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL-------QGEIDFDTD----- 247
+ Y K IDIWS G IL +LS P F + + IL Q +++ +
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 260
Query: 248 -----------PW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
PW P+ S A DL+ +MLT +P +RI Q L HP+L + + SD+
Sbjct: 261 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 320
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 132/300 (44%), Gaps = 46/300 (15%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +G+ +N A K I+ + + REI+I L + N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL--REIKILLRFRHE-NIIGIN 91
Query: 91 -----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
T E V++V +L E DL+ +++ + S L I+ + HS V
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY----RDIVGSGFYIAPEVL--R 199
+HRDLKP N + D LK+ DFG A + + + + V + +Y APE++
Sbjct: 150 LHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 206
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL-------QGEIDFDTD----- 247
+ Y K IDIWS G IL +LS P F + + IL Q +++ +
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 266
Query: 248 -----------PW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
PW P+ S A DL+ +MLT +P +RI Q L HP+L + + SD+
Sbjct: 267 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 326
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 132/300 (44%), Gaps = 46/300 (15%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +G+ +N A K I+ + + REI+I L + N++
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL--REIKILLRFRHE-NIIGIN 92
Query: 91 -----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
T E V++V +L E DL+ +++ + S L I+ + HS V
Sbjct: 93 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 150
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY----RDIVGSGFYIAPEVL--R 199
+HRDLKP N + D LK+ DFG A + + + + V + +Y APE++
Sbjct: 151 LHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 207
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL-------QGEIDFDTD----- 247
+ Y K IDIWS G IL +LS P F + + IL Q +++ +
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 267
Query: 248 -----------PW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
PW P+ S A DL+ +MLT +P +RI Q L HP+L + + SD+
Sbjct: 268 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 327
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 132/300 (44%), Gaps = 46/300 (15%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +G+ +N A K I+ + + REI+I L + N++
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL--REIKILLRFRHE-NIIGIN 92
Query: 91 -----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
T E V++V +L E DL+ +++ + S L I+ + HS V
Sbjct: 93 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 150
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR----DIVGSGFYIAPEVL--R 199
+HRDLKP N + D LK+ DFG A + + + + V + +Y APE++
Sbjct: 151 LHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 207
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL-------QGEIDFDTD----- 247
+ Y K IDIWS G IL +LS P F + + IL Q +++ +
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 267
Query: 248 -----------PW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
PW P+ S A DL+ +MLT +P +RI Q L HP+L + + SD+
Sbjct: 268 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 327
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 132/300 (44%), Gaps = 46/300 (15%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +G+ +N A K I+ + + REI+I L + N++
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL--REIKILLRFRHE-NIIGIN 93
Query: 91 -----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
T E V++V +L E DL+ +++ + S L I+ + HS V
Sbjct: 94 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 151
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR----DIVGSGFYIAPEVL--R 199
+HRDLKP N + D LK+ DFG A + + + + V + +Y APE++
Sbjct: 152 LHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 208
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL-------QGEIDFDTD----- 247
+ Y K IDIWS G IL +LS P F + + IL Q +++ +
Sbjct: 209 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 268
Query: 248 -----------PW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
PW P+ S A DL+ +MLT +P +RI Q L HP+L + + SD+
Sbjct: 269 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 328
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 132/300 (44%), Gaps = 46/300 (15%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +G+ +N A K I+ + + REI+I L + N++
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL--REIKILLRFRHE-NIIGIN 84
Query: 91 -----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
T E V++V +L E DL+ +++ + S L I+ + HS V
Sbjct: 85 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 142
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR----DIVGSGFYIAPEVL--R 199
+HRDLKP N + D LK+ DFG A + + + + V + +Y APE++
Sbjct: 143 LHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 199
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL-------QGEIDFDTD----- 247
+ Y K IDIWS G IL +LS P F + + IL Q +++ +
Sbjct: 200 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 259
Query: 248 -----------PW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
PW P+ S A DL+ +MLT +P +RI Q L HP+L + + SD+
Sbjct: 260 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 319
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 132/300 (44%), Gaps = 46/300 (15%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +G+ +N A K I+ + + REI+I L + N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL--REIKILLRFRHE-NIIGIN 91
Query: 91 -----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
T E V++V +L E DL+ +++ + S L I+ + HS V
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR----DIVGSGFYIAPEVL--R 199
+HRDLKP N + D LK+ DFG A + + + + V + +Y APE++
Sbjct: 150 LHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL-------QGEIDFDTD----- 247
+ Y K IDIWS G IL +LS P F + + IL Q +++ +
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 266
Query: 248 -----------PW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
PW P+ S A DL+ +MLT +P +RI Q L HP+L + + SD+
Sbjct: 267 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 326
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 132/300 (44%), Gaps = 46/300 (15%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +G+ +N A K I+ + + REI+I L + N++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL--REIKILLAFRHE-NIIGIN 89
Query: 91 -----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
T E V++V +L E DL+ +++ + S L I+ + HS V
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 147
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR----DIVGSGFYIAPEVL--R 199
+HRDLKP N + D LK+ DFG A + + + + V + +Y APE++
Sbjct: 148 LHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL-------QGEIDFDTD----- 247
+ Y K IDIWS G IL +LS P F + + IL Q +++ +
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 264
Query: 248 -----------PW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
PW P+ S A DL+ +MLT +P +RI Q L HP+L + + SD+
Sbjct: 265 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDPSDE 324
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 135/283 (47%), Gaps = 40/283 (14%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
++LG G G + + + RP A K +M + D+ EI++ PNV+
Sbjct: 39 KILGYGSSG-TVVFQGSFQGRPVAVK------RMLIDFCDIALMEIKLLTESDDHPNVIR 91
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSER-------DAATVLRAIVNAVNVCH 141
+ + + +++ +ELC +L D + +K + E + ++LR I + V H
Sbjct: 92 YYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 150
Query: 142 SMGVMHRDLKPENF--SFISR--------DDNALLKVTDFGSALLFEEGQV-----YRDI 186
S+ ++HRDLKP+N S SR +N + ++DFG + GQ +
Sbjct: 151 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 210
Query: 187 VGSGFYIAPEVL----RRRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGE 241
G+ + APE+L +RR + IDI+S G + Y +LS G PF + + + I++G
Sbjct: 211 SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES--NIIRGI 268
Query: 242 IDFDTDPW---PSISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281
D S+ + A DL+ +M+ DP +R TA +VL HP
Sbjct: 269 FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 311
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 135/283 (47%), Gaps = 40/283 (14%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
++LG G G + + + RP A K +M + D+ EI++ PNV+
Sbjct: 39 KILGYGSSG-TVVFQGSFQGRPVAVK------RMLIDFCDIALMEIKLLTESDDHPNVIR 91
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSER-------DAATVLRAIVNAVNVCH 141
+ + + +++ +ELC +L D + +K + E + ++LR I + V H
Sbjct: 92 YYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 150
Query: 142 SMGVMHRDLKPENF--SFISR--------DDNALLKVTDFGSALLFEEGQV-----YRDI 186
S+ ++HRDLKP+N S SR +N + ++DFG + GQ +
Sbjct: 151 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 210
Query: 187 VGSGFYIAPEVL----RRRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGE 241
G+ + APE+L +RR + IDI+S G + Y +LS G PF + + + I++G
Sbjct: 211 SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES--NIIRGI 268
Query: 242 IDFDTDPW---PSISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281
D S+ + A DL+ +M+ DP +R TA +VL HP
Sbjct: 269 FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 311
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 132/300 (44%), Gaps = 46/300 (15%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +G+ +N A K I+ + + REI+I L + N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL--REIKILLRFRHE-NIIGIN 91
Query: 91 -----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
T E V++V +L E DL+ +++ + S L I+ + HS V
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKCQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR----DIVGSGFYIAPEVL--R 199
+HRDLKP N + D LK+ DFG A + + + + V + +Y APE++
Sbjct: 150 LHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL-------QGEIDFDTD----- 247
+ Y K IDIWS G IL +LS P F + + IL Q +++ +
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 266
Query: 248 -----------PW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
PW P+ S A DL+ +MLT +P +RI Q L HP+L + + SD+
Sbjct: 267 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 326
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 132/300 (44%), Gaps = 46/300 (15%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +G+ +N A + I+ + + REI+I L + N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTL--REIKILLRFRHE-NIIGIN 91
Query: 91 -----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
T E V++V +L E DL+ +++ + S L I+ + HS V
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR----DIVGSGFYIAPEVL--R 199
+HRDLKP N + D LK+ DFG A + + + + V + +Y APE++
Sbjct: 150 LHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL-------QGEIDFDTD----- 247
+ Y K IDIWS G IL +LS P F + + IL Q +++ +
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 266
Query: 248 -----------PW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
PW P+ S A DL+ +MLT +P +RI Q L HP+L + + SD+
Sbjct: 267 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 326
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 130/297 (43%), Gaps = 49/297 (16%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
Y R LGRG++ + + N K + KP + + I+REI+I L G P
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKIL--KP----VKKNKIKREIKILENLRGGP 92
Query: 85 NVVEFKSTYEDETA--VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS 142
N++ +D + +V E D F ++ ++ D + I+ A++ CHS
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQTL--TDYDIRFYMYEILKALDYCHS 149
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL--RR 200
MG+MHRD+KP N + ++ L++ D+G A + GQ Y V S ++ PE+L +
Sbjct: 150 MGIMHRDVKPHN--VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 201 RYGKEIDIWSAGVILYILLSGVPPFWAETKK-----------GT---YDAILQGEIDFDT 246
Y +D+WS G +L ++ PF+ GT YD I + I+ D
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 247 -----------DPWPS---------ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
W +S A D + ++L D + R+TA + +EHP+
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 124/303 (40%), Gaps = 57/303 (18%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR--LYLSGQPNV 86
RM G+G FG L E ST A K + + P+ R RE+QI L + PN+
Sbjct: 29 RMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFR-------NRELQIMQDLAVLHHPNI 81
Query: 87 VEFKSTY-------EDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAI-----V 134
V+ +S + + ++VVME D R Y + +L + +
Sbjct: 82 VQLQSYFYTLGERDRRDIYLNVVMEYVP--DTLHRCCRNYYRRQVAPPPILIKVFLFQLI 139
Query: 135 NAVNVCH--SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY 192
++ H S+ V HRD+KP N + + + LK+ DFGSA + + S +Y
Sbjct: 140 RSIGCLHLPSVNVCHRDIKPHN--VLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYY 197
Query: 193 IAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ----------- 239
APE++ + Y +DIWS G I ++ G P F + G I++
Sbjct: 198 RAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLR 257
Query: 240 ----GEIDFDTD-----PWPSISS--------TAKDLVRRMLTKDPKRRITAAQVLEHPW 282
D D PW ++ S A DL+ +L P+ R+ + L HP+
Sbjct: 258 KLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPY 317
Query: 283 LRE 285
E
Sbjct: 318 FDE 320
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 135/287 (47%), Gaps = 44/287 (15%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
++LG G G + + + RP A K +M + D+ EI++ PNV+
Sbjct: 21 KILGYGSSG-TVVFQGSFQGRPVAVK------RMLIDFCDIALMEIKLLTESDDHPNVIR 73
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSER-------DAATVLRAIVNAVNVCH 141
+ + + +++ +ELC +L D + +K + E + ++LR I + V H
Sbjct: 74 YYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 132
Query: 142 SMGVMHRDLKPENF--SFISR--------DDNALLKVTDFGSALLFEEGQV-----YRDI 186
S+ ++HRDLKP+N S SR +N + ++DFG + GQ +
Sbjct: 133 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 192
Query: 187 VGSGFYIAPEVL--------RRRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAI 237
G+ + APE+L +RR + IDI+S G + Y +LS G PF + + + I
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES--NI 250
Query: 238 LQGEIDFDTDPW---PSISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281
++G D S+ + A DL+ +M+ DP +R TA +VL HP
Sbjct: 251 IRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 132/286 (46%), Gaps = 43/286 (15%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSI---AKKPKMRLAENDMI---RREIQIRLYLSG- 82
+LG+G FG +R YA K I +K L+E ++ + +R Y +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 83 -QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAA-TVLRAIVNAVNVC 140
+ N V+ + + ++ + + ME CE G L+D I ++ N +RD + R I+ A++
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI-------------- 186
HS G++HRDLKP N FI N +K+ DFG A V+R +
Sbjct: 133 HSQGIIHRDLKPMNI-FIDESRN--VKIGDFGLA-----KNVHRSLDILKLDSQNLPGSS 184
Query: 187 ------VGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL 238
+G+ Y+A EVL Y ++ID++S G+I + + + PF ++ L
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM---IYPFSTGMERVNILKKL 241
Query: 239 QG-EIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+ I+F D + K ++R ++ DP +R A +L WL
Sbjct: 242 RSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 135/287 (47%), Gaps = 44/287 (15%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
++LG G G + + + RP A K +M + D+ EI++ PNV+
Sbjct: 21 KILGYGSSG-TVVFQGSFQGRPVAVK------RMLIDFCDIALMEIKLLTESDDHPNVIR 73
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSER-------DAATVLRAIVNAVNVCH 141
+ + + +++ +ELC +L D + +K + E + ++LR I + V H
Sbjct: 74 YYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 132
Query: 142 SMGVMHRDLKPENF--SFISR--------DDNALLKVTDFGSALLFEEGQV-----YRDI 186
S+ ++HRDLKP+N S SR +N + ++DFG + GQ +
Sbjct: 133 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNP 192
Query: 187 VGSGFYIAPEVL--------RRRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAI 237
G+ + APE+L +RR + IDI+S G + Y +LS G PF + + + I
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES--NI 250
Query: 238 LQGEIDFDTDPW---PSISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281
++G D S+ + A DL+ +M+ DP +R TA +VL HP
Sbjct: 251 IRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 136/311 (43%), Gaps = 46/311 (14%)
Query: 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLY 79
DV Y + +G G +G+ ++ A K I+ + + REIQI L
Sbjct: 40 DVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTL--REIQILLR 97
Query: 80 LSGQPNVVEFK-----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIV 134
+ NV+ + ST E V++V +L E DL+ +++ S L I+
Sbjct: 98 FRHE-NVIGIRDILRASTLEAMRDVYIVQDLMET-DLY-KLLKSQQLSNDHICYFLYQIL 154
Query: 135 NAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL----FEEGQVYRDIVGSG 190
+ HS V+HRDLKP N + D LK+ DFG A + + + V +
Sbjct: 155 RGLKYIHSANVLHRDLKPSNLLINTTCD---LKICDFGLARIADPEHDHTGFLTEXVATR 211
Query: 191 FYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL-------QGE 241
+Y APE++ + Y K IDIWS G IL +LS P F + + IL Q +
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 271
Query: 242 ID----------FDTDP----------WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281
++ + P +P S A DL+ RMLT +P +RIT + L HP
Sbjct: 272 LNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHP 331
Query: 282 WLRESGEASDD 292
+L + + +D+
Sbjct: 332 YLEQYYDPTDE 342
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 128/296 (43%), Gaps = 28/296 (9%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R +G G FG Y + + A K ++ K + I +E++ L PN ++
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQ 79
Query: 89 FKSTYEDETAVHVVMELCEG--GDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
++ Y E +VME C G DL + + K E + A V + + HS ++
Sbjct: 80 YRGCYLREHTAWLVMEYCLGSASDLLE--VHKKPLQEVEIAAVTHGALQGLAYLHSHNMI 137
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL----RRRY 202
HRD+K N I + L+K+ DFGSA + + VG+ +++APEV+ +Y
Sbjct: 138 HRDVKAGN---ILLSEPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVILAMDEGQY 191
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID-FDTDPWPSISSTAKDLVR 261
++D+WS G+ L PP + I Q E + W S ++ V
Sbjct: 192 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFVD 248
Query: 262 RMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMK---------QFRRMNKL 308
L K P+ R T+ +L+H ++ + +I R K Q+R+M K+
Sbjct: 249 SCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVRELDNLQYRKMKKI 304
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 128/296 (43%), Gaps = 28/296 (9%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R +G G FG Y + + A K ++ K + I +E++ L PN ++
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQ 118
Query: 89 FKSTYEDETAVHVVMELCEG--GDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
++ Y E +VME C G DL + + K E + A V + + HS ++
Sbjct: 119 YRGCYLREHTAWLVMEYCLGSASDLLE--VHKKPLQEVEIAAVTHGALQGLAYLHSHNMI 176
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL----RRRY 202
HRD+K N I + L+K+ DFGSA + + VG+ +++APEV+ +Y
Sbjct: 177 HRDVKAGN---ILLSEPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVILAMDEGQY 230
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID-FDTDPWPSISSTAKDLVR 261
++D+WS G+ L PP + I Q E + W S ++ V
Sbjct: 231 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFVD 287
Query: 262 RMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMK---------QFRRMNKL 308
L K P+ R T+ +L+H ++ + +I R K Q+R+M K+
Sbjct: 288 SCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVRELDNLQYRKMKKI 343
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 136/278 (48%), Gaps = 17/278 (6%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G+G FG + +N T + A K I + E + I++EI + L V ++
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKII--DLEEAEDEIEDIQQEITV-LSQCDSSYVTKYY 87
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
+Y + + ++ME GG D + A ++ E AT+L+ I+ ++ HS +HRD+
Sbjct: 88 GSYLKGSKLWIIMEYLGGGSALDLLRAGPFD-EFQIATMLKEILKGLDYLHSEKKIHRDI 146
Query: 151 KPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD-IVGSGFYIAPEVLRRR-YGKEIDI 208
K N + D +K+ DFG A + Q+ R+ VG+ F++APEV+++ Y + DI
Sbjct: 147 KAANVLLSEQGD---VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADI 203
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPW--PSISSTAKDLVRRMLTK 266
WS G+ L G PP + + I + P + + K+ + L K
Sbjct: 204 WSLGITAIELAKGEPP-----NSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFIDACLNK 258
Query: 267 DPKRRITAAQVLEHPWL-RESGEASDDTSVILRMKQFR 303
DP R TA ++L+H ++ + S + S T +I R K+++
Sbjct: 259 DPSFRPTAKELLKHKFIVKNSKKTSYLTELIDRFKRWK 296
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 120/264 (45%), Gaps = 22/264 (8%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LG G FG Y T+ A K I K + L E+ M+ +I L PN+V+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL-EDYMVEIDI---LASCDHPNIVKLL 100
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVCHSMGVMHR 148
+ E + +++E C GG + D ++ + +E V + ++A+N H ++HR
Sbjct: 101 DAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR 159
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD-IVGSGFYIAPEVLR------RR 201
DLK N F D +K+ DFG + RD +G+ +++APEV+ R
Sbjct: 160 DLKAGNILFTLDGD---IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDP--WPSISSTAKDL 259
Y + D+WS G+ L + PP I + E P W SS KD
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFKDF 273
Query: 260 VRRMLTKDPKRRITAAQVLEHPWL 283
+++ L K+ R T +Q+L+HP++
Sbjct: 274 LKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 120/264 (45%), Gaps = 22/264 (8%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LG G FG Y T+ A K I K + L E+ M+ +I L PN+V+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL-EDYMVEIDI---LASCDHPNIVKLL 100
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVCHSMGVMHR 148
+ E + +++E C GG + D ++ + +E V + ++A+N H ++HR
Sbjct: 101 DAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR 159
Query: 149 DLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLR------RR 201
DLK N F D +K+ DFG SA Q +G+ +++APEV+ R
Sbjct: 160 DLKAGNILFTLDGD---IKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDP--WPSISSTAKDL 259
Y + D+WS G+ L + PP I + E P W SS KD
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFKDF 273
Query: 260 VRRMLTKDPKRRITAAQVLEHPWL 283
+++ L K+ R T +Q+L+HP++
Sbjct: 274 LKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 120/264 (45%), Gaps = 22/264 (8%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LG G FG Y T+ A K I K + L E+ M+ +I L PN+V+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL-EDYMVEIDI---LASCDHPNIVKLL 100
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVCHSMGVMHR 148
+ E + +++E C GG + D ++ + +E V + ++A+N H ++HR
Sbjct: 101 DAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR 159
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD-IVGSGFYIAPEVLR------RR 201
DLK N F D +K+ DFG + RD +G+ +++APEV+ R
Sbjct: 160 DLKAGNILFTLDGD---IKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRP 216
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDP--WPSISSTAKDL 259
Y + D+WS G+ L + PP I + E P W SS KD
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFKDF 273
Query: 260 VRRMLTKDPKRRITAAQVLEHPWL 283
+++ L K+ R T +Q+L+HP++
Sbjct: 274 LKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 127/273 (46%), Gaps = 22/273 (8%)
Query: 25 YFFGRMLGRGQFGV--SYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSG 82
Y G +LG G +G L +E R K ++ E + +++EIQ+ L
Sbjct: 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEAN-VKKEIQLLRRLRH 65
Query: 83 QPNVVEFKSTY--EDETAVHVVMELCEGG--DLFDRIIAKGYNSERDAATVLRAIVNAVN 138
+ NV++ E++ +++VME C G ++ D + K + + A +++ +
Sbjct: 66 K-NVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQ-AHGYFCQLIDGLE 123
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA---LLFEEGQVYRDIVGSGFYIAP 195
HS G++H+D+KP N + LK++ G A F R GS + P
Sbjct: 124 YLHSQGIVHKDIKPGNLLLTT---GGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPP 180
Query: 196 EV---LRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252
E+ L G ++DIWSAGV LY + +G+ PF + ++ I +G D P +
Sbjct: 181 EIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPL 240
Query: 253 SSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
S DL++ ML +P +R + Q+ +H W R+
Sbjct: 241 S----DLLKGMLEYEPAKRFSIRQIRQHSWFRK 269
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 139/322 (43%), Gaps = 67/322 (20%)
Query: 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREI 74
GK E + Y +++G G FGV + ++ A K + + + + RE+
Sbjct: 32 GKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFK-------NREL 83
Query: 75 QIRLYLSGQPNVVEFKSTY------EDETAVHVVMELCEGGDLFDRIIAKGYNSERDAAT 128
QI + + PNVV+ K+ + +DE +++V+E + Y + R A
Sbjct: 84 QI-MRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEY---------VPETVYRASRHYAK 133
Query: 129 V------------LRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176
+ + ++ ++ HS+G+ HRD+KP+N + + +LK+ DFGSA +
Sbjct: 134 LKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQN--LLLDPPSGVLKLIDFGSAKI 191
Query: 177 FEEGQVYRDIVGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTY 234
G+ + S +Y APE++ Y IDIWS G ++ L+ G P F E+
Sbjct: 192 LIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQL 251
Query: 235 DAILQ-----------------GEIDFD---TDPW-----PSISSTAKDLVRRMLTKDPK 269
I++ E F P+ P A DL+ R+L P
Sbjct: 252 VEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPS 311
Query: 270 RRITAAQVLEHPWLRE--SGEA 289
R+TA + L HP+ E +GEA
Sbjct: 312 ARLTAIEALCHPFFDELRTGEA 333
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 16/252 (6%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ +GRGQF Y P A K + M +EI + L+ PNV++
Sbjct: 38 KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPNVIK 96
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRII-----AKGYNSERDAATVLRAIVNAVNVCHSM 143
+ +++ ++ +++V+EL + GDL R+I K ER + +A+ HS
Sbjct: 97 YYASFIEDNELNIVLELADAGDL-SRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR 155
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLF-EEGQVYRDIVGSGFYIAPEVLRRR- 201
VMHRD+KP N FI+ ++K+ D G F + +VG+ +Y++PE +
Sbjct: 156 RVMHRDIKPANV-FITA--TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG 212
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS--ISSTAKDL 259
Y + DIWS G +LY + + PF+ + K Y + E D P PS S + L
Sbjct: 213 YNFKSDIWSLGCLLYEMAALQSPFYGD-KMNLYSLCKKIE-QCDYPPLPSDHYSEELRQL 270
Query: 260 VRRMLTKDPKRR 271
V + DP++R
Sbjct: 271 VNMCINPDPEKR 282
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 129/305 (42%), Gaps = 57/305 (18%)
Query: 25 YFFGRM--------LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRL-AENDMIR---- 71
YF G M +G G +GV Y ++S R A K I RL AE++ I
Sbjct: 15 YFQGLMEKYQKLEKVGEGTYGVVYK-AKDSQGRIVALKRI------RLDAEDEGIPSTAI 67
Query: 72 REIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAAT--V 129
REI + L PN+V E + +V E E +++ + +D+
Sbjct: 68 REISLLKELH-HPNIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIY 124
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVG 188
L ++ V CH ++HRDLKP+N + + LK+ DFG A F + Y V
Sbjct: 125 LYQLLRGVAHCHQHRILHRDLKPQNLLI---NSDGALKLADFGLARAFGIPVRSYTHEVV 181
Query: 189 SGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKK----------GTYDA 236
+ +Y AP+VL ++Y +DIWS G I +++G P F T GT +
Sbjct: 182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNP 241
Query: 237 ILQGEID------------FDTDPW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280
++ F+ PW P DL+ ML DP +RI+A + H
Sbjct: 242 REWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301
Query: 281 PWLRE 285
P+ ++
Sbjct: 302 PYFKD 306
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 129/305 (42%), Gaps = 57/305 (18%)
Query: 25 YFFGRM--------LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRL-AENDMIR---- 71
YF G M +G G +GV Y ++S R A K I RL AE++ I
Sbjct: 15 YFQGLMEKYQKLEKVGEGTYGVVYK-AKDSQGRIVALKRI------RLDAEDEGIPSTAI 67
Query: 72 REIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAAT--V 129
REI + L PN+V E + +V E E +++ + +D+
Sbjct: 68 REISLLKELH-HPNIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIY 124
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVG 188
L ++ V CH ++HRDLKP+N + + LK+ DFG A F + Y V
Sbjct: 125 LYQLLRGVAHCHQHRILHRDLKPQNLLI---NSDGALKLADFGLARAFGIPVRSYTHEVV 181
Query: 189 SGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKK----------GTYDA 236
+ +Y AP+VL ++Y +DIWS G I +++G P F T GT +
Sbjct: 182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNP 241
Query: 237 ILQGEID------------FDTDPW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280
++ F+ PW P DL+ ML DP +RI+A + H
Sbjct: 242 REWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301
Query: 281 PWLRE 285
P+ ++
Sbjct: 302 PYFKD 306
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 131/286 (45%), Gaps = 43/286 (15%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSI---AKKPKMRLAENDMI---RREIQIRLYLSG- 82
+LG+G FG +R YA K I +K L+E ++ + +R Y +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 83 -QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAA-TVLRAIVNAVNVC 140
+ N V+ + + ++ + + ME CE L+D I ++ N +RD + R I+ A++
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI-------------- 186
HS G++HRDLKP N FI N +K+ DFG A V+R +
Sbjct: 133 HSQGIIHRDLKPMNI-FIDESRN--VKIGDFGLA-----KNVHRSLDILKLDSQNLPGSS 184
Query: 187 ------VGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL 238
+G+ Y+A EVL Y ++ID++S G+I + + + PF ++ L
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM---IYPFSTGMERVNILKKL 241
Query: 239 QG-EIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+ I+F D + K ++R ++ DP +R A +L WL
Sbjct: 242 RSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 122/270 (45%), Gaps = 24/270 (8%)
Query: 27 FGRMLGR-GQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
F ++G G FG Y T+ A K I K + L E+ M+ +I L PN
Sbjct: 13 FWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEEL-EDYMVEIDI---LASCDHPN 68
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVCHSM 143
+V+ + E + +++E C GG + D ++ + +E V + ++A+N H
Sbjct: 69 IVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDN 127
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR--DIVGSGFYIAPEVLR-- 199
++HRDLK N F D +K+ DFG + + R +G+ +++APEV+
Sbjct: 128 KIIHRDLKAGNILFTLDGD---IKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCE 184
Query: 200 ----RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDP--WPSIS 253
R Y + D+WS G+ L + PP I + E P W S
Sbjct: 185 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---S 241
Query: 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
S KD +++ L K+ R T +Q+L+HP++
Sbjct: 242 SNFKDFLKKCLEKNVDARWTTSQLLQHPFV 271
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 124/269 (46%), Gaps = 32/269 (11%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LG G FG Y T A K I K + L E+ ++ EI L P +V+
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL-EDYIVEIEI---LATCDHPYIVKLL 74
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIA---KGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
Y + + +++E C GG + D I+ +G +E V R ++ A+N HS ++H
Sbjct: 75 GAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGL-TEPQIQVVCRQMLEALNFLHSKRIIH 132
Query: 148 RDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLR------R 200
RDLK N D +++ DFG SA + Q +G+ +++APEV+
Sbjct: 133 RDLKAGNVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 189
Query: 201 RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK--- 257
Y + DIWS G+ L + PP I + +DP P++ + +K
Sbjct: 190 PYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK------SDP-PTLLTPSKWSV 242
Query: 258 ---DLVRRMLTKDPKRRITAAQVLEHPWL 283
D ++ L K+P+ R +AAQ+LEHP++
Sbjct: 243 EFRDFLKIALDKNPETRPSAAQLLEHPFV 271
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 124/269 (46%), Gaps = 32/269 (11%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LG G FG Y T A K I K + L E+ ++ EI L P +V+
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL-EDYIVEIEI---LATCDHPYIVKLL 82
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIA---KGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
Y + + +++E C GG + D I+ +G +E V R ++ A+N HS ++H
Sbjct: 83 GAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGL-TEPQIQVVCRQMLEALNFLHSKRIIH 140
Query: 148 RDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLR------R 200
RDLK N D +++ DFG SA + Q +G+ +++APEV+
Sbjct: 141 RDLKAGNVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 197
Query: 201 RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK--- 257
Y + DIWS G+ L + PP I + +DP P++ + +K
Sbjct: 198 PYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK------SDP-PTLLTPSKWSV 250
Query: 258 ---DLVRRMLTKDPKRRITAAQVLEHPWL 283
D ++ L K+P+ R +AAQ+LEHP++
Sbjct: 251 EFRDFLKIALDKNPETRPSAAQLLEHPFV 279
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 136/313 (43%), Gaps = 56/313 (17%)
Query: 1 MGCSVSKNQRDP-------ILGK---AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRP 50
MG S S Q D I+GK +DV+ H G ++ RG F NR
Sbjct: 1 MGSSPSLEQDDGDEETSVVIVGKISFCPKDVLGHGAEGTIVYRGMF----------DNRD 50
Query: 51 YACKSIAKKPKMRLAEN-DMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGG 109
A K I L E RE+Q+ PNV+ + T +D ++ +ELC
Sbjct: 51 VAVKRI-------LPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAA- 102
Query: 110 DLFDRIIAKGYNSERDAA-------TVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDD 162
+ Y ++D A T+L+ + + HS+ ++HRDLKP N +
Sbjct: 103 ------TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNA 156
Query: 163 NALLK--VTDFGSALLFEEGQVY----RDIVGSGFYIAPEVL----RRRYGKEIDIWSAG 212
+ +K ++DFG G+ + G+ +IAPE+L + +DI+SAG
Sbjct: 157 HGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAG 216
Query: 213 VILYILLS-GVPPFWAETKKGTYDAILQGEIDFDT-DPWPSISSTAKDLVRRMLTKDPKR 270
+ Y ++S G PF ++ IL G D P A++L+ +M+ DP++
Sbjct: 217 CVFYYVISEGSHPFGKSLQRQA--NILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQK 274
Query: 271 RITAAQVLEHPWL 283
R +A VL+HP+
Sbjct: 275 RPSAKHVLKHPFF 287
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 133/294 (45%), Gaps = 38/294 (12%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACK----SIAKKPKMRLAENDMIRREIQIRLYL 80
Y G +LG G +L + +R A K +A+ P L RRE Q L
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYL----RFRREAQNAAAL 69
Query: 81 SGQPNVVEFKSTYEDETAV----HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNA 136
+ P +V T E ET ++VME +G L D + +G + + A V+ A
Sbjct: 70 N-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 137 VNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYRD---IVGSGFY 192
+N H G++HRD+KP N + + +KV DFG A + + G ++G+ Y
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATN---AVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 193 IAPEVLRRRYGKEI----DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDP 248
++PE R G + D++S G +LY +L+G PPF ++ D++ + D P
Sbjct: 186 LSPEQAR---GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP----DSVAYQHVREDPIP 238
Query: 249 WPS-----ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR-ESGEASDDTSVI 296
PS +S+ +V + L K+P+ R A + +R +GE + V+
Sbjct: 239 -PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVL 291
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 132/296 (44%), Gaps = 42/296 (14%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACK----SIAKKPKMRLAENDMIRREIQIRLYL 80
Y G +LG G +L + +R A K +A+ P L RRE Q L
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYL----RFRREAQNAAAL 69
Query: 81 SGQPNVVEFKSTYEDETAV----HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNA 136
+ P +V +T E ET ++VME +G L D + +G + + A V+ A
Sbjct: 70 N-HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 137 VNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYRD---IVGSGFY 192
+N H G++HRD+KP N + + +KV DFG A + + G ++G+ Y
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATN---AVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 193 IAPEVLRRRYGKEI----DIWSAGVILYILLSGVPPFWAETKKG-TYDAILQGEIDFDTD 247
++PE R G + D++S G +LY +L+G PPF ++ Y + + D
Sbjct: 186 LSPEQAR---GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE-------D 235
Query: 248 PWP------SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR-ESGEASDDTSVI 296
P P +S+ +V + L K+P+ R A + +R +GE + V+
Sbjct: 236 PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVL 291
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 132/296 (44%), Gaps = 42/296 (14%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACK----SIAKKPKMRLAENDMIRREIQIRLYL 80
Y G +LG G +L + +R A K +A+ P L RRE Q L
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYL----RFRREAQNAAAL 69
Query: 81 SGQPNVVEFKSTYEDETAV----HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNA 136
+ P +V T E ET ++VME +G L D + +G + + A V+ A
Sbjct: 70 N-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 137 VNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYRD---IVGSGFY 192
+N H G++HRD+KP N IS + +KV DFG A + + G ++G+ Y
Sbjct: 129 LNFSHQNGIIHRDVKPANI-LISATN--AVKVVDFGIARAIADSGNSVXQTAAVIGTAQY 185
Query: 193 IAPEVLRRRYGKEI----DIWSAGVILYILLSGVPPFWAETKKG-TYDAILQGEIDFDTD 247
++PE R G + D++S G +LY +L+G PPF ++ Y + + D
Sbjct: 186 LSPEQAR---GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE-------D 235
Query: 248 PWP------SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR-ESGEASDDTSVI 296
P P +S+ +V + L K+P+ R A + +R +GE + V+
Sbjct: 236 PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVL 291
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 122/266 (45%), Gaps = 18/266 (6%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89
+LG+G +G+ Y + S A K I P+ + + EI + +L + N+V++
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEI---PERDSRYSQPLHEEIALHKHLKHK-NIVQY 84
Query: 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKG---YNSERDAATVLRAIVNAVNVCHSMGVM 146
++ + + + ME GG L + +K ++E+ + I+ + H ++
Sbjct: 85 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 144
Query: 147 HRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVL---RRRY 202
HRD+K +N + + +LK++DFG S L G+ Y+APE++ R Y
Sbjct: 145 HRDIKGDNV--LINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGY 202
Query: 203 GKEIDIWSAGVILYILLSGVPPFW--AETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260
GK DIWS G + + +G PPF+ E + + G + S+S+ AK +
Sbjct: 203 GKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV---GMFKVHPEIPESMSAEAKAFI 259
Query: 261 RRMLTKDPKRRITAAQVLEHPWLRES 286
+ DP +R A +L +L+ S
Sbjct: 260 LKCFEPDPDKRACANDLLVDEFLKVS 285
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 131/296 (44%), Gaps = 42/296 (14%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACK----SIAKKPKMRLAENDMIRREIQIRLYL 80
Y G +LG G +L + +R A K +A+ P L RRE Q L
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYL----RFRREAQNAAAL 69
Query: 81 SGQPNVVEFKSTYEDETAV----HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNA 136
+ P +V T E ET ++VME +G L D + +G + + A V+ A
Sbjct: 70 N-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 137 VNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYRD---IVGSGFY 192
+N H G++HRD+KP N + + +KV DFG A + + G ++G+ Y
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATN---AVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 193 IAPEVLRRRYGKEI----DIWSAGVILYILLSGVPPFWAETKKG-TYDAILQGEIDFDTD 247
++PE R G + D++S G +LY +L+G PPF ++ Y + + D
Sbjct: 186 LSPEQAR---GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE-------D 235
Query: 248 PWP------SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR-ESGEASDDTSVI 296
P P +S+ +V + L K+P+ R A + +R +GE + V+
Sbjct: 236 PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVL 291
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 131/296 (44%), Gaps = 42/296 (14%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACK----SIAKKPKMRLAENDMIRREIQIRLYL 80
Y G +LG G +L + +R A K +A+ P L RRE Q L
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYL----RFRREAQNAAAL 69
Query: 81 SGQPNVVEFKSTYEDETAV----HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNA 136
+ P +V T E ET ++VME +G L D + +G + + A V+ A
Sbjct: 70 N-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 137 VNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYRD---IVGSGFY 192
+N H G++HRD+KP N + + +KV DFG A + + G ++G+ Y
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATN---AVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 193 IAPEVLRRRYGKEI----DIWSAGVILYILLSGVPPFWAETKKG-TYDAILQGEIDFDTD 247
++PE R G + D++S G +LY +L+G PPF ++ Y + + D
Sbjct: 186 LSPEQAR---GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE-------D 235
Query: 248 PWP------SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR-ESGEASDDTSVI 296
P P +S+ +V + L K+P+ R A + +R +GE + V+
Sbjct: 236 PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVL 291
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 120/264 (45%), Gaps = 18/264 (6%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89
+LG+G +G+ Y + S A K I P+ + + EI + +L N+V++
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEI---PERDSRYSQPLHEEIALHKHLK-HKNIVQY 70
Query: 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKG---YNSERDAATVLRAIVNAVNVCHSMGVM 146
++ + + + ME GG L + +K ++E+ + I+ + H ++
Sbjct: 71 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 130
Query: 147 HRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVL---RRRY 202
HRD+K +N + + +LK++DFG S L G+ Y+APE++ R Y
Sbjct: 131 HRDIKGDNV--LINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGY 188
Query: 203 GKEIDIWSAGVILYILLSGVPPFW--AETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260
GK DIWS G + + +G PPF+ E + + G + S+S+ AK +
Sbjct: 189 GKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV---GMFKVHPEIPESMSAEAKAFI 245
Query: 261 RRMLTKDPKRRITAAQVLEHPWLR 284
+ DP +R A +L +L+
Sbjct: 246 LKCFEPDPDKRACANDLLVDEFLK 269
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 126/277 (45%), Gaps = 42/277 (15%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACK----SIAKKPKMRLAENDMIRREIQIRLYL 80
Y G +LG G +L + +R A K +A+ P L RRE Q L
Sbjct: 31 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYL----RFRREAQNAAAL 86
Query: 81 SGQPNVVEFKSTYEDETAV----HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNA 136
+ P +V T E ET ++VME +G L D + +G + + A V+ A
Sbjct: 87 N-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 145
Query: 137 VNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYRD---IVGSGFY 192
+N H G++HRD+KP N + + +KV DFG A + + G ++G+ Y
Sbjct: 146 LNFSHQNGIIHRDVKPANIMISATN---AVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 202
Query: 193 IAPEVLRRRYGKEI----DIWSAGVILYILLSGVPPFWAETKKG-TYDAILQGEIDFDTD 247
++PE R G + D++S G +LY +L+G PPF ++ Y + + D
Sbjct: 203 LSPEQAR---GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE-------D 252
Query: 248 PWP------SISSTAKDLVRRMLTKDPKRRI-TAAQV 277
P P +S+ +V + L K+P+ R TAA++
Sbjct: 253 PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 289
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 134/330 (40%), Gaps = 69/330 (20%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLY----- 79
Y G+ LG G FG+ + + + +A K + + P+ + E D+++ + +
Sbjct: 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDY 68
Query: 80 --------------------LSGQPNVV--EFKSTYEDETA---VHVVMELCEGGDLFDR 114
L G+ N V KS + + ++V+ME D +
Sbjct: 69 FYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP--DTLHK 126
Query: 115 IIAKGYNSERDAATVLRAI-----VNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVT 169
++ S R L +I AV HS+G+ HRD+KP+N S+D+ LK+
Sbjct: 127 VLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNT--LKLC 184
Query: 170 DFGSALLFEEGQVYRDIVGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWA 227
DFGSA + + S FY APE++ Y ID+WS G + L+ G P F
Sbjct: 185 DFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSG 244
Query: 228 ETKKGTYDAILQ-----------------GEIDFDT---DPWPSI-----SSTAKDLVRR 262
ET I+Q E+ F T W I S A DL+ +
Sbjct: 245 ETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQ 304
Query: 263 MLTKDPKRRITAAQVLEHPW---LRESGEA 289
+L +P RI + + HP+ LR S E+
Sbjct: 305 ILRYEPDLRINPYEAMAHPFFDHLRNSYES 334
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 130/286 (45%), Gaps = 43/286 (15%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSI---AKKPKMRLAENDMI---RREIQIRLYLSG- 82
+LG+G FG +R YA K I +K L+E ++ + +R Y +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 83 -QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAA-TVLRAIVNAVNVC 140
+ N V+ + + ++ + + E CE L+D I ++ N +RD + R I+ A++
Sbjct: 73 ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI-------------- 186
HS G++HR+LKP N FI D++ +K+ DFG A V+R +
Sbjct: 133 HSQGIIHRNLKPXNI-FI--DESRNVKIGDFGLA-----KNVHRSLDILKLDSQNLPGSS 184
Query: 187 ------VGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL 238
+G+ Y+A EVL Y ++ID +S G+I + + PF ++ L
Sbjct: 185 DNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFF---EXIYPFSTGXERVNILKKL 241
Query: 239 QG-EIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+ I+F D + K ++R ++ DP +R A +L WL
Sbjct: 242 RSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
+ +LG+G + T +A K +R + M RE ++ L+
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQM--REFEVLKKLN-HK 67
Query: 85 NVVEFKSTYEDETAVH--VVMELCEGGDLFDRIIAKGYNS----ERDAATVLRAIVNAVN 138
N+V+ + E+ T H ++ME C G L+ ++ + N+ E + VLR +V +N
Sbjct: 68 NIVKLFAIEEETTTRHKVLIMEFCPCGSLYT-VLEEPSNAYGLPESEFLIVLRDVVGGMN 126
Query: 139 VCHSMGVMHRDLKPENF-SFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPE- 196
G++HR++KP N I D ++ K+TDFG+A E+ + + + G+ Y+ P+
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDM 186
Query: 197 ----VLR----RRYGKEIDIWSAGVILYILLSGVPPF 225
VLR ++YG +D+WS GV Y +G PF
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 121/283 (42%), Gaps = 41/283 (14%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSI--AKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
LG GQF Y + +TN+ A K I + + + N REI++ LS PN++
Sbjct: 17 FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNII 75
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA----IVNAVNVCHSM 143
+ ++ + +V + E DL +I K NS + ++A + + H
Sbjct: 76 GLLDAFGHKSNISLVFDFMET-DL--EVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQH 131
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLF-EEGQVYRDIVGSGFYIAPEVL--RR 200
++HRDLKP N D+N +LK+ DFG A F + Y V + +Y APE+L R
Sbjct: 132 WILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGAR 188
Query: 201 RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK--- 257
YG +D+W+ G IL LL VP ++ I + + WP + S
Sbjct: 189 MYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT 248
Query: 258 ---------------------DLVRRMLTKDPKRRITAAQVLE 279
DL++ + +P RITA Q L+
Sbjct: 249 FKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 97/208 (46%), Gaps = 19/208 (9%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKK--PKMRLAENDMIRREIQIRLYLSGQPNVVE 88
LG G FG T A K ++ PK R + EIQI L+ PNVV
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNR----ERWCLEIQIMKKLN-HPNVVS 77
Query: 89 FKSTYEDETAVH------VVMELCEGGDLFDRIIAKGYNS----ERDAATVLRAIVNAVN 138
+ + + + ME CEGGDL + + + N E T+L I +A+
Sbjct: 78 AREVPDGLQKLAPNDLPLLAMEYCEGGDL-RKYLNQFENCCGLKEGPIRTLLSDISSALR 136
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
H ++HRDLKPEN + K+ D G A ++G++ + VG+ Y+APE+L
Sbjct: 137 YLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELL 196
Query: 199 -RRRYGKEIDIWSAGVILYILLSGVPPF 225
+++Y +D WS G + + ++G PF
Sbjct: 197 EQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 97/208 (46%), Gaps = 19/208 (9%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKK--PKMRLAENDMIRREIQIRLYLSGQPNVVE 88
LG G FG T A K ++ PK R + EIQI L+ PNVV
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNR----ERWCLEIQIMKKLN-HPNVVS 76
Query: 89 FKSTYEDETAVH------VVMELCEGGDLFDRIIAKGYNS----ERDAATVLRAIVNAVN 138
+ + + + ME CEGGDL + + + N E T+L I +A+
Sbjct: 77 AREVPDGLQKLAPNDLPLLAMEYCEGGDL-RKYLNQFENCCGLKEGPIRTLLSDISSALR 135
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
H ++HRDLKPEN + K+ D G A ++G++ + VG+ Y+APE+L
Sbjct: 136 YLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELL 195
Query: 199 -RRRYGKEIDIWSAGVILYILLSGVPPF 225
+++Y +D WS G + + ++G PF
Sbjct: 196 EQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
+ +LG+G + T +A K +R + M RE ++ L+
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQM--REFEVLKKLN-HK 67
Query: 85 NVVEFKSTYEDETAVH--VVMELCEGGDLFDRIIAKGYNS----ERDAATVLRAIVNAVN 138
N+V+ + E+ T H ++ME C G L+ ++ + N+ E + VLR +V +N
Sbjct: 68 NIVKLFAIEEETTTRHKVLIMEFCPCGSLYT-VLEEPSNAYGLPESEFLIVLRDVVGGMN 126
Query: 139 VCHSMGVMHRDLKPENF-SFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPE- 196
G++HR++KP N I D ++ K+TDFG+A E+ + + + G+ Y+ P+
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDM 186
Query: 197 ----VLR----RRYGKEIDIWSAGVILYILLSGVPPF 225
VLR ++YG +D+WS GV Y +G PF
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 19/254 (7%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LGRG FG + + T A K K+RL ++ R E + P +V
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVK------KVRL---EVFRAEELMACAGLTSPRIVPLY 132
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
+ V++ MEL EGG L + +G E A L + + HS ++H D+
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDV 192
Query: 151 KPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD------IVGSGFYIAPE-VLRRRYG 203
K +N S +A L DFG A+ + + +D I G+ ++APE VL R
Sbjct: 193 KADNVLLSSDGSHAAL--CDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCD 250
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
++D+WS+ ++ +L+G P W + +G + E + PS + ++
Sbjct: 251 AKVDVWSSCCMMLHMLNGCHP-WTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEG 309
Query: 264 LTKDPKRRITAAQV 277
L K+P R++AA++
Sbjct: 310 LRKEPIHRVSAAEL 323
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 124/270 (45%), Gaps = 25/270 (9%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAK--KPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
LG G GV + + + A K I KP +R + I RE+Q+ L+ P +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR----NQIIRELQV-LHECNSPYIVG 68
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCH-SMGVM 146
F + + + + ME +GG L D+++ K G E+ V A++ + +M
Sbjct: 69 FYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIM 127
Query: 147 HRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGK 204
HRD+KP N SR + +K+ DFG S L + + VG+ Y++PE L+ Y
Sbjct: 128 HRDVKPSNILVNSRGE---IKLCDFGVSGQLID--SMANSFVGTRSYMSPERLQGTHYSV 182
Query: 205 EIDIWSAGVILYILLSG---VPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA----- 256
+ DIWS G+ L + G +PP A+ AI + +P P + S
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEF 242
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRES 286
+D V + L K+P R Q++ H +++ S
Sbjct: 243 QDFVNKCLIKNPAERADLKQLMVHAFIKRS 272
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 114/294 (38%), Gaps = 48/294 (16%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRR-------EIQIRLYLS 81
+++G G FGV Y + A K + + + + E ++R+ ++ Y S
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSS 85
Query: 82 GQPNVVEFKST---YEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVN 138
G+ V + + Y ET V I K Y + + ++
Sbjct: 86 GEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY---------MYQLFRSLA 136
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
HS G+ HRD+KP+N + D A+LK+ DFGSA G+ + S +Y APE++
Sbjct: 137 YIHSFGICHRDIKPQNL--LLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 194
Query: 199 --RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ----------------- 239
Y ID+WSAG +L LL G P F ++ I++
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 254
Query: 240 GEIDFD---TDPW-----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
E F PW P A L R+L P R+T + H + E
Sbjct: 255 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 308
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 117/285 (41%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 68
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL D + A + L ++ + CHS V+HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKPEN + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 128 DLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 184
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 114/259 (44%), Gaps = 47/259 (18%)
Query: 80 LSGQPNVVEFKSTYEDETA--VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L G PN++ +D + +V E D F ++ ++ D + I+ A+
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQTL--TDYDIRFYMYEILKAL 144
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV 197
+ CHSMG+MHRD+KP N + ++ L++ D+G A + GQ Y V S ++ PE+
Sbjct: 145 DYCHSMGIMHRDVKPHN--VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 198 L--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKK-----------GT---YDAILQGE 241
L + Y +D+WS G +L ++ PF+ GT YD I +
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 242 IDFDT-----------DPWPS---------ISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281
I+ D W +S A D + ++L D + R+TA + +EHP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 282 W----LRESGEASDDTSVI 296
+ ++E + D +V+
Sbjct: 323 YFYPVVKEQSQPCADNAVL 341
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 129/283 (45%), Gaps = 48/283 (16%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF- 89
LGRG FGV + + YA K I + P LA + + RE++ L P +V +
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRI-RLPNRELA-REKVMREVKALAKLE-HPGIVRYF 69
Query: 90 -----KSTYED------ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLR---AIVN 135
K+T E + +++ M+LC +L D + + ER+ + L I
Sbjct: 70 NAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAE 129
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI--------- 186
AV HS G+MHRDLKP N F + DD ++KV DFG ++ + + +
Sbjct: 130 AVEFLHSKGLMHRDLKPSNI-FFTMDD--VVKVGDFGLVTAMDQDEEEQTVLTPMPAYAR 186
Query: 187 ----VGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGE 241
VG+ Y++PE + Y ++DI+S G+IL+ LL PF + ++ ++
Sbjct: 187 HTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER------VRTL 237
Query: 242 IDFDTDPWPSISSTAKD----LVRRMLTKDPKRRITAAQVLEH 280
D +P + + +V+ ML+ P R A ++E+
Sbjct: 238 TDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 132/341 (38%), Gaps = 81/341 (23%)
Query: 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIR--R 72
G+ V+ Y + LG+G +G+ + + T A K I + D R R
Sbjct: 1 GRVDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQ---NSTDAQRTFR 57
Query: 73 EIQIRLYLSGQPNVVEFKSTY--EDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVL 130
EI I LSG N+V + +++ V++V + E +I V+
Sbjct: 58 EIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETD--LHAVIRANILEPVHKQYVV 115
Query: 131 RAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF------------- 177
++ + HS G++HRD+KP N I + +KV DFG + F
Sbjct: 116 YQLIKVIKYLHSGGLLHRDMKPSN---ILLNAECHVKVADFGLSRSFVNIRRVTNNIPLS 172
Query: 178 ---------EEGQVYRDIVGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFW 226
++ + D V + +Y APE+L +Y K ID+WS G IL +L G P F
Sbjct: 173 INENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFP 232
Query: 227 AETKKGTYDAILQGEIDFDT---------------------------------------- 246
+ + I+ G IDF +
Sbjct: 233 GSSTMNQLERII-GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNL 291
Query: 247 ----DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+P + A DL+ ++L +P +RI+A L+HP++
Sbjct: 292 LLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFV 332
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 120/294 (40%), Gaps = 48/294 (16%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++G G FGV Y + A K + L + RE+QI L N+V
Sbjct: 45 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVR 96
Query: 89 ----FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA------IVNAVN 138
F S+ E + V++ + L + R+ A+ Y+ + V+ + ++
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMYQLFRSLA 155
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
HS G+ HRD+KP+N + D A+LK+ DFGSA G+ + S +Y APE++
Sbjct: 156 YIHSFGICHRDIKPQNL--LLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 213
Query: 199 --RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ----------------- 239
Y ID+WSAG +L LL G P F ++ I++
Sbjct: 214 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 273
Query: 240 GEIDFD---TDPW-----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
E F PW P A L R+L P R+T + H + E
Sbjct: 274 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 327
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 120/294 (40%), Gaps = 48/294 (16%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++G G FGV Y + A K + L + RE+QI L N+V
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVR 89
Query: 89 ----FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA------IVNAVN 138
F S+ E + V++ + L + R+ A+ Y+ + V+ + ++
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
HS G+ HRD+KP+N + D A+LK+ DFGSA G+ + S +Y APE++
Sbjct: 149 YIHSFGICHRDIKPQNL--LLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 206
Query: 199 --RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ----------------- 239
Y ID+WSAG +L LL G P F ++ I++
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 266
Query: 240 GEIDFD---TDPW-----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
E F PW P A L R+L P R+T + H + E
Sbjct: 267 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 320
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 120/294 (40%), Gaps = 48/294 (16%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++G G FGV Y + A K + L + RE+QI L N+V
Sbjct: 27 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVR 78
Query: 89 ----FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA------IVNAVN 138
F S+ E + V++ + L + R+ A+ Y+ + V+ + ++
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMYQLFRSLA 137
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
HS G+ HRD+KP+N + D A+LK+ DFGSA G+ + S +Y APE++
Sbjct: 138 YIHSFGICHRDIKPQNL--LLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 195
Query: 199 --RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ----------------- 239
Y ID+WSAG +L LL G P F ++ I++
Sbjct: 196 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 255
Query: 240 GEIDFD---TDPW-----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
E F PW P A L R+L P R+T + H + E
Sbjct: 256 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 309
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 122/267 (45%), Gaps = 29/267 (10%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAK--KPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
LG G GV + + + A K I KP +R + I RE+Q+ L+ P +V
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR----NQIIRELQV-LHECNSPYIVG 71
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCH-SMGVM 146
F + + + + ME +GG L D+++ K G E+ V A++ + +M
Sbjct: 72 FYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIM 130
Query: 147 HRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGK 204
HRD+KP N SR + +K+ DFG S L +E + + VG+ Y++PE L+ Y
Sbjct: 131 HRDVKPSNILVNSRGE---IKLCDFGVSGQLIDE--MANEFVGTRSYMSPERLQGTHYSV 185
Query: 205 EIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA-----KDL 259
+ DIWS G+ L + G P D I+ +P P + S +D
Sbjct: 186 QSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIV-------NEPPPKLPSAVFSLEFQDF 238
Query: 260 VRRMLTKDPKRRITAAQVLEHPWLRES 286
V + L K+P R Q++ H +++ S
Sbjct: 239 VNKCLIKNPAERADLKQLMVHAFIKRS 265
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 120/294 (40%), Gaps = 48/294 (16%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++G G FGV Y + A K + L + RE+QI L N+V
Sbjct: 30 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVR 81
Query: 89 ----FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA------IVNAVN 138
F S+ E + V++ + L + R+ A+ Y+ + V+ + ++
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMYQLFRSLA 140
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
HS G+ HRD+KP+N + D A+LK+ DFGSA G+ + S +Y APE++
Sbjct: 141 YIHSFGICHRDIKPQNL--LLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 198
Query: 199 --RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ----------------- 239
Y ID+WSAG +L LL G P F ++ I++
Sbjct: 199 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 258
Query: 240 GEIDFD---TDPW-----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
E F PW P A L R+L P R+T + H + E
Sbjct: 259 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 312
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 120/294 (40%), Gaps = 48/294 (16%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++G G FGV Y + A K + L + RE+QI L N+V
Sbjct: 34 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVR 85
Query: 89 ----FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA------IVNAVN 138
F S+ E + V++ + L + R+ A+ Y+ + V+ + ++
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMYQLFRSLA 144
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
HS G+ HRD+KP+N + D A+LK+ DFGSA G+ + S +Y APE++
Sbjct: 145 YIHSFGICHRDIKPQNL--LLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 202
Query: 199 --RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ----------------- 239
Y ID+WSAG +L LL G P F ++ I++
Sbjct: 203 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 262
Query: 240 GEIDFD---TDPW-----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
E F PW P A L R+L P R+T + H + E
Sbjct: 263 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 316
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 120/294 (40%), Gaps = 48/294 (16%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++G G FGV Y + A K + L + RE+QI L N+V
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVR 77
Query: 89 ----FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA------IVNAVN 138
F S+ E + V++ + L + R+ A+ Y+ + V+ + ++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
HS G+ HRD+KP+N + D A+LK+ DFGSA G+ + S +Y APE++
Sbjct: 137 YIHSFGICHRDIKPQNL--LLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 194
Query: 199 --RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ----------------- 239
Y ID+WSAG +L LL G P F ++ I++
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 254
Query: 240 GEIDFD---TDPW-----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
E F PW P A L R+L P R+T + H + E
Sbjct: 255 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 308
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 120/294 (40%), Gaps = 48/294 (16%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++G G FGV Y + A K + L + RE+QI L N+V
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVR 77
Query: 89 ----FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA------IVNAVN 138
F S+ E + V++ + L + R+ A+ Y+ + V+ + ++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
HS G+ HRD+KP+N + D A+LK+ DFGSA G+ + S +Y APE++
Sbjct: 137 YIHSFGICHRDIKPQNL--LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 194
Query: 199 --RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ----------------- 239
Y ID+WSAG +L LL G P F ++ I++
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 254
Query: 240 GEIDFD---TDPW-----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
E F PW P A L R+L P R+T + H + E
Sbjct: 255 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 308
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 128/295 (43%), Gaps = 56/295 (18%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEND-----MIRREIQIRLYLSGQPN 85
+G G +G + T+ A K ++RL ++D REI + L + N
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALK------RVRLDDDDEGVPSSALREICLLKELKHK-N 62
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDL---FDRIIAKGYNSERDAATV---LRAIVNAVNV 139
+V + + +V E C+ DL FD N + D V L ++ +
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSC-----NGDLDPEIVKSFLFQLLKGLGF 116
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVL 198
CHS V+HRDLKP+N I+R N LK+ DFG A F + Y V + +Y P+VL
Sbjct: 117 CHSRNVLHRDLKPQNL-LINR--NGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVL 173
Query: 199 --RRRYGKEIDIWSAGVILYILLSGVPPFWA-----ETKKGTYDAI----------LQGE 241
+ Y ID+WSAG I L + P + + K + + +
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233
Query: 242 IDFDTDPW-----------PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
D+ P P +++T +DL++ +L +P +RI+A + L+HP+ +
Sbjct: 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 120/294 (40%), Gaps = 48/294 (16%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++G G FGV Y + A K + L + RE+QI L N+V
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVR 89
Query: 89 ----FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA------IVNAVN 138
F S+ E + V++ + L + R+ A+ Y+ + V+ + ++
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
HS G+ HRD+KP+N + D A+LK+ DFGSA G+ + S +Y APE++
Sbjct: 149 YIHSFGICHRDIKPQNL--LLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 206
Query: 199 --RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ----------------- 239
Y ID+WSAG +L LL G P F ++ I++
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 266
Query: 240 GEIDFD---TDPW-----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
E F PW P A L R+L P R+T + H + E
Sbjct: 267 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 320
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 120/294 (40%), Gaps = 48/294 (16%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++G G FGV Y + A K + L + RE+QI L N+V
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVR 105
Query: 89 ----FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA------IVNAVN 138
F S+ E + V++ + L + R+ A+ Y+ + V+ + ++
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMYQLFRSLA 164
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
HS G+ HRD+KP+N + D A+LK+ DFGSA G+ + S +Y APE++
Sbjct: 165 YIHSFGICHRDIKPQNL--LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 222
Query: 199 --RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ----------------- 239
Y ID+WSAG +L LL G P F ++ I++
Sbjct: 223 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 282
Query: 240 GEIDFD---TDPW-----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
E F PW P A L R+L P R+T + H + E
Sbjct: 283 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 336
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 120/294 (40%), Gaps = 48/294 (16%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++G G FGV Y + A K + L + RE+QI L N+V
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVR 77
Query: 89 ----FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA------IVNAVN 138
F S+ E + V++ + L + R+ A+ Y+ + V+ + ++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
HS G+ HRD+KP+N + D A+LK+ DFGSA G+ + S +Y APE++
Sbjct: 137 YIHSFGICHRDIKPQNL--LLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 194
Query: 199 --RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ----------------- 239
Y ID+WSAG +L LL G P F ++ I++
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 254
Query: 240 GEIDFD---TDPW-----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
E F PW P A L R+L P R+T + H + E
Sbjct: 255 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 308
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 121/294 (41%), Gaps = 48/294 (16%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++G G FGV Y + A K + + + + RE+QI L N+V
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLD-HCNIVR 82
Query: 89 ----FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA------IVNAVN 138
F S+ E + V++ + L + R+ A+ Y+ + V+ + ++
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMYQLFRSLA 141
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
HS G+ HRD+KP+N + D A+LK+ DFGSA G+ + S +Y APE++
Sbjct: 142 YIHSFGICHRDIKPQNL--LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 199
Query: 199 --RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ----------------- 239
Y ID+WSAG +L LL G P F ++ I++
Sbjct: 200 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 259
Query: 240 GEIDFD---TDPW-----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
E F PW P A L R+L P R+T + H + E
Sbjct: 260 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 313
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 120/294 (40%), Gaps = 48/294 (16%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++G G FGV Y + A K + L + RE+QI L N+V
Sbjct: 39 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVR 90
Query: 89 ----FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA------IVNAVN 138
F S+ E + V++ + L + R+ A+ Y+ + V+ + ++
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMYQLFRSLA 149
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
HS G+ HRD+KP+N + D A+LK+ DFGSA G+ + S +Y APE++
Sbjct: 150 YIHSFGICHRDIKPQNL--LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 207
Query: 199 --RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ----------------- 239
Y ID+WSAG +L LL G P F ++ I++
Sbjct: 208 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 267
Query: 240 GEIDFD---TDPW-----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
E F PW P A L R+L P R+T + H + E
Sbjct: 268 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 321
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 120/275 (43%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ L + + I L NV + T E+ V++VMEL +
Sbjct: 56 SRPFQNQTHAKRAYRELVLLKCVNHKNIISLL-----NVFTPQKTLEEFQDVYLVMELMD 110
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I + LK
Sbjct: 111 AN--LCQVIHMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDCTLK 164
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPF- 225
+ DFG A + V + +Y APEV L Y + +DIWS G I+ L+ G F
Sbjct: 165 ILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQ 224
Query: 226 -------WAE------TKKGTYDAILQGEID--FDTDP-WPSI----------------- 252
W + T + A LQ + + P +P I
Sbjct: 225 GTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESER 284
Query: 253 ----SSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+S A+DL+ +ML DP +RI+ + L HP++
Sbjct: 285 DKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 319
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 119/275 (43%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ L + + I L NV + T E+ V++VMEL +
Sbjct: 58 SRPFQNQTHAKRAYRELVLLKCVNHKNIISLL-----NVFTPQKTLEEFQDVYLVMELMD 112
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I + LK
Sbjct: 113 AN--LCQVIHMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDCTLK 166
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPF- 225
+ DFG A + V + +Y APEV L Y +DIWS G I+ L+ G F
Sbjct: 167 ILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQ 226
Query: 226 -------WAE------TKKGTYDAILQGEID--FDTDP-WPSI----------------- 252
W + T + A LQ + + P +P I
Sbjct: 227 GTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESER 286
Query: 253 ----SSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+S A+DL+ +ML DP +RI+ + L HP++
Sbjct: 287 DKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 321
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 120/294 (40%), Gaps = 48/294 (16%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++G G FGV Y + A K + L + RE+QI L N+V
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVR 111
Query: 89 ----FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA------IVNAVN 138
F S+ E + V++ + L + R+ A+ Y+ + V+ + ++
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
HS G+ HRD+KP+N + D A+LK+ DFGSA G+ + S +Y APE++
Sbjct: 171 YIHSFGICHRDIKPQNL--LLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 228
Query: 199 --RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ----------------- 239
Y ID+WSAG +L LL G P F ++ I++
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 288
Query: 240 GEIDFD---TDPW-----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
E F PW P A L R+L P R+T + H + E
Sbjct: 289 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 342
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 123/267 (46%), Gaps = 25/267 (9%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAK--KPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
LG G GV + + + A K I KP +R + I RE+Q+ L+ P +V
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR----NQIIRELQV-LHECNSPYIVG 87
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCH-SMGVM 146
F + + + + ME +GG L D+++ K G E+ V A++ + +M
Sbjct: 88 FYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIM 146
Query: 147 HRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGK 204
HRD+KP N SR + +K+ DFG S L + + VG+ Y++PE L+ Y
Sbjct: 147 HRDVKPSNILVNSRGE---IKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQGTHYSV 201
Query: 205 EIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA-----KDL 259
+ DIWS G+ L + G P + + +L ++ +P P + S +D
Sbjct: 202 QSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVN---EPPPKLPSGVFSLEFQDF 258
Query: 260 VRRMLTKDPKRRITAAQVLEHPWLRES 286
V + L K+P R Q++ H +++ S
Sbjct: 259 VNKCLIKNPAERADLKQLMVHAFIKRS 285
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 120/294 (40%), Gaps = 48/294 (16%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++G G FGV Y + A K + L + RE+QI L N+V
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVR 111
Query: 89 ----FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA------IVNAVN 138
F S+ E + V++ + L + R+ A+ Y+ + V+ + ++
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
HS G+ HRD+KP+N + D A+LK+ DFGSA G+ + S +Y APE++
Sbjct: 171 YIHSFGICHRDIKPQNL--LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 228
Query: 199 --RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ----------------- 239
Y ID+WSAG +L LL G P F ++ I++
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 288
Query: 240 GEIDFD---TDPW-----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
E F PW P A L R+L P R+T + H + E
Sbjct: 289 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 342
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 120/294 (40%), Gaps = 48/294 (16%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++G G FGV Y + A K + L + RE+QI L N+V
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVR 113
Query: 89 ----FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA------IVNAVN 138
F S+ E + V++ + L + R+ A+ Y+ + V+ + ++
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMYQLFRSLA 172
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
HS G+ HRD+KP+N + D A+LK+ DFGSA G+ + S +Y APE++
Sbjct: 173 YIHSFGICHRDIKPQNL--LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 230
Query: 199 --RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ----------------- 239
Y ID+WSAG +L LL G P F ++ I++
Sbjct: 231 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 290
Query: 240 GEIDFD---TDPW-----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
E F PW P A L R+L P R+T + H + E
Sbjct: 291 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 344
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 133/303 (43%), Gaps = 53/303 (17%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKS-----IAKKPKMRLAENDMIRREIQIRLYLSGQ 83
R L +G+F LC ++ N+ YA K + KK + ND I + + + +
Sbjct: 37 RTLNQGKFNKIILCEKD--NKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNEL 94
Query: 84 PNVVEFKSTY--------EDETAVHVVMELCEGGDL--FDR---IIAKGYNSE---RDAA 127
+ + K+ Y + V+++ E E + FD ++ K Y +
Sbjct: 95 QIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIK 154
Query: 128 TVLRAIVNAVNVCHS-MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI 186
++++++N+ + H+ + HRD+KP N I D N +K++DFG + E V + I
Sbjct: 155 CIIKSVLNSFSYIHNEKNICHRDVKPSN---ILMDKNGRVKLSDFGES----EYMVDKKI 207
Query: 187 VGS-GFY--IAPEVLRRRY---GKEIDIWSAGVILYILLSGVPPFWAETK-KGTYDAILQ 239
GS G Y + PE G ++DIWS G+ LY++ V PF + ++ I
Sbjct: 208 KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRT 267
Query: 240 GEIDFDTD------PWPSISSTAK---------DLVRRMLTKDPKRRITAAQVLEHPWLR 284
I++ D P + ST D ++ L K+P RIT+ L+H WL
Sbjct: 268 KNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLA 327
Query: 285 ESG 287
++
Sbjct: 328 DTN 330
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 126/295 (42%), Gaps = 56/295 (18%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEND-----MIRREIQIRLYLSGQPN 85
+G G +G + T+ A K ++RL ++D REI + L + N
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALK------RVRLDDDDEGVPSSALREICLLKELKHK-N 62
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDL---FDRIIAKGYNSERDAATV---LRAIVNAVNV 139
+V + + +V E C+ DL FD N + D V L ++ +
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSC-----NGDLDPEIVKSFLFQLLKGLGF 116
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVL 198
CHS V+HRDLKP+N I+R N LK+ +FG A F + Y V + +Y P+VL
Sbjct: 117 CHSRNVLHRDLKPQNL-LINR--NGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVL 173
Query: 199 --RRRYGKEIDIWSAGVILYILL-SGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS-- 253
+ Y ID+WSAG I L +G P F I + + WPS++
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233
Query: 254 -----------------------STAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+T +DL++ +L +P +RI+A + L+HP+ +
Sbjct: 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 120/294 (40%), Gaps = 48/294 (16%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++G G FGV Y + A K + L + RE+QI L N+V
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVR 156
Query: 89 ----FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA------IVNAVN 138
F S+ E + V++ + L + R+ A+ Y+ + V+ + ++
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMYQLFRSLA 215
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
HS G+ HRD+KP+N + D A+LK+ DFGSA G+ + S +Y APE++
Sbjct: 216 YIHSFGICHRDIKPQNL--LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 273
Query: 199 --RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ----------------- 239
Y ID+WSAG +L LL G P F ++ I++
Sbjct: 274 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 333
Query: 240 GEIDFD---TDPW-----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
E F PW P A L R+L P R+T + H + E
Sbjct: 334 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 387
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 27/204 (13%)
Query: 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFI 158
+++VME C DL + K + + + ++ AV+ H G++H DLKP NF +
Sbjct: 84 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV 142
Query: 159 SRDDNALLKVTDFGSA--LLFEEGQVYRDI-VGSGFYIAPEVLR-----RRYG------- 203
+ +LK+ DFG A + + V +D VG+ Y+ PE ++ R G
Sbjct: 143 ----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 198
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKK-GTYDAIL--QGEIDFDTDPWPSISSTAKDLV 260
+ D+WS G ILY + G PF + AI+ EI+F P +D++
Sbjct: 199 PKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP----EKDLQDVL 254
Query: 261 RRMLTKDPKRRITAAQVLEHPWLR 284
+ L +DPK+RI+ ++L HP+++
Sbjct: 255 KCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 120/294 (40%), Gaps = 48/294 (16%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++G G FGV Y + A K + L + RE+QI L N+V
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVR 115
Query: 89 ----FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA------IVNAVN 138
F S+ E + V++ + L + R+ A+ Y+ + V+ + ++
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMYQLFRSLA 174
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
HS G+ HRD+KP+N + D A+LK+ DFGSA G+ + S +Y APE++
Sbjct: 175 YIHSFGICHRDIKPQNL--LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 232
Query: 199 --RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ----------------- 239
Y ID+WSAG +L LL G P F ++ I++
Sbjct: 233 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 292
Query: 240 GEIDFD---TDPW-----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
E F PW P A L R+L P R+T + H + E
Sbjct: 293 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 346
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 43/242 (17%)
Query: 80 LSGQPNVVEFKSTYEDETA--VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L G PN++ +D + +V E D F ++ ++ D + I+ A+
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQTL--TDYDIRFYMYEILKAL 144
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV 197
+ CHSMG+MHRD+KP N + ++ L++ D+G A + GQ Y V S ++ PE+
Sbjct: 145 DYCHSMGIMHRDVKPHN--VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 198 L--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKK-----------GT---YDAILQGE 241
L + Y +D+WS G +L ++ PF+ GT YD I +
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 242 IDFDT-----------DPWPS---------ISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281
I+ D W +S A D + ++L D + R+TA + +EHP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 282 WL 283
+
Sbjct: 323 YF 324
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 43/242 (17%)
Query: 80 LSGQPNVVEFKSTYEDETA--VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L G PN++ +D + +V E D F ++ ++ D + I+ A+
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQTL--TDYDIRFYMYEILKAL 144
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV 197
+ CHSMG+MHRD+KP N + ++ L++ D+G A + GQ Y V S ++ PE+
Sbjct: 145 DYCHSMGIMHRDVKPHN--VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 198 L--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKK-----------GT---YDAILQGE 241
L + Y +D+WS G +L ++ PF+ GT YD I +
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 242 IDFDT-----------DPWPS---------ISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281
I+ D W +S A D + ++L D + R+TA + +EHP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 282 WL 283
+
Sbjct: 323 YF 324
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 27/204 (13%)
Query: 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFI 158
+++VME C DL + K + + + ++ AV+ H G++H DLKP NF +
Sbjct: 103 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV 161
Query: 159 SRDDNALLKVTDFGSA--LLFEEGQVYRDI-VGSGFYIAPEVLR-----RRYG------- 203
+ +LK+ DFG A + + V +D VG+ Y+ PE ++ R G
Sbjct: 162 ----DGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 217
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKK-GTYDAIL--QGEIDFDTDPWPSISSTAKDLV 260
+ D+WS G ILY + G PF + AI+ EI+F P +D++
Sbjct: 218 PKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP----EKDLQDVL 273
Query: 261 RRMLTKDPKRRITAAQVLEHPWLR 284
+ L +DPK+RI+ ++L HP+++
Sbjct: 274 KCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 27/204 (13%)
Query: 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFI 158
+++VME C DL + K + + + ++ AV+ H G++H DLKP NF +
Sbjct: 131 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV 189
Query: 159 SRDDNALLKVTDFGSA--LLFEEGQVYRDI-VGSGFYIAPEVLR-----RRYG------- 203
+ +LK+ DFG A + + V +D VG+ Y+ PE ++ R G
Sbjct: 190 ----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 245
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKK-GTYDAIL--QGEIDFDTDPWPSISSTAKDLV 260
+ D+WS G ILY + G PF + AI+ EI+F P +D++
Sbjct: 246 PKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP----EKDLQDVL 301
Query: 261 RRMLTKDPKRRITAAQVLEHPWLR 284
+ L +DPK+RI+ ++L HP+++
Sbjct: 302 KCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 43/242 (17%)
Query: 80 LSGQPNVVEFKSTYEDETA--VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L G PN++ +D + +V E D F ++ ++ D + I+ A+
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQTL--TDYDIRFYMYEILKAL 144
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV 197
+ CHSMG+MHRD+KP N + ++ L++ D+G A + GQ Y V S ++ PE+
Sbjct: 145 DYCHSMGIMHRDVKPHN--VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 198 L--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKK-----------GT---YDAILQGE 241
L + Y +D+WS G +L ++ PF+ GT YD I +
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 242 IDFDT-----------DPWPS---------ISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281
I+ D W +S A D + ++L D + R+TA + +EHP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 282 WL 283
+
Sbjct: 323 YF 324
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 43/242 (17%)
Query: 80 LSGQPNVVEFKSTYEDETA--VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L G PN++ +D + +V E D F ++ ++ D + I+ A+
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQTL--TDYDIRFYMYEILKAL 144
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV 197
+ CHSMG+MHRD+KP N + ++ L++ D+G A + GQ Y V S ++ PE+
Sbjct: 145 DYCHSMGIMHRDVKPHN--VLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 198 L--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKK-----------GT---YDAILQGE 241
L + Y +D+WS G +L ++ PF+ GT YD I +
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 242 IDFDT-----------DPWPS---------ISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281
I+ D W +S A D + ++L D + R+TA + +EHP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 282 WL 283
+
Sbjct: 323 YF 324
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 43/242 (17%)
Query: 80 LSGQPNVVEFKSTYEDETA--VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L G PN++ +D + +V E D F ++ ++ D + I+ A+
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQTL--TDYDIRFYMYEILKAL 144
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV 197
+ CHSMG+MHRD+KP N + ++ L++ D+G A + GQ Y V S ++ PE+
Sbjct: 145 DYCHSMGIMHRDVKPHN--VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 198 L--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKK-----------GT---YDAILQGE 241
L + Y +D+WS G +L ++ PF+ GT YD I +
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 242 IDFDT-----------DPWPS---------ISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281
I+ D W +S A D + ++L D + R+TA + +EHP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 282 WL 283
+
Sbjct: 323 YF 324
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 27/204 (13%)
Query: 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFI 158
+++VME C DL + K + + + ++ AV+ H G++H DLKP NF +
Sbjct: 131 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV 189
Query: 159 SRDDNALLKVTDFGSA--LLFEEGQVYRDI-VGSGFYIAPEVLR-----RRYG------- 203
+ +LK+ DFG A + + V +D VG+ Y+ PE ++ R G
Sbjct: 190 ----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 245
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKK-GTYDAIL--QGEIDFDTDPWPSISSTAKDLV 260
+ D+WS G ILY + G PF + AI+ EI+F P + +D++
Sbjct: 246 PKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL----QDVL 301
Query: 261 RRMLTKDPKRRITAAQVLEHPWLR 284
+ L +DPK+RI+ ++L HP+++
Sbjct: 302 KCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 27/204 (13%)
Query: 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFI 158
+++VME C DL + K + + + ++ AV+ H G++H DLKP NF +
Sbjct: 87 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV 145
Query: 159 SRDDNALLKVTDFGSA--LLFEEGQVYRDI-VGSGFYIAPEVLR-----RRYG------- 203
+ +LK+ DFG A + + V +D VG+ Y+ PE ++ R G
Sbjct: 146 ----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 201
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKK-GTYDAIL--QGEIDFDTDPWPSISSTAKDLV 260
+ D+WS G ILY + G PF + AI+ EI+F P +D++
Sbjct: 202 PKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP----EKDLQDVL 257
Query: 261 RRMLTKDPKRRITAAQVLEHPWLR 284
+ L +DPK+RI+ ++L HP+++
Sbjct: 258 KCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 43/242 (17%)
Query: 80 LSGQPNVVEFKSTYEDETA--VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L G PN++ +D + +V E D F ++ ++ D + I+ A+
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQTL--TDYDIRFYMYEILKAL 144
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV 197
+ CHSMG+MHRD+KP N + ++ L++ D+G A + GQ Y V S ++ PE+
Sbjct: 145 DYCHSMGIMHRDVKPHN--VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 198 L--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKK-----------GT---YDAILQGE 241
L + Y +D+WS G +L ++ PF+ GT YD I +
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 242 IDFDT-----------DPWPS---------ISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281
I+ D W +S A D + ++L D + R+TA + +EHP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 282 WL 283
+
Sbjct: 323 YF 324
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 27/204 (13%)
Query: 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFI 158
+++VME C DL + K + + + ++ AV+ H G++H DLKP NF +
Sbjct: 103 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV 161
Query: 159 SRDDNALLKVTDFGSA--LLFEEGQVYRDI-VGSGFYIAPEVLR-----RRYG------- 203
+ +LK+ DFG A + + V +D VG+ Y+ PE ++ R G
Sbjct: 162 ----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 217
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKK-GTYDAIL--QGEIDFDTDPWPSISSTAKDLV 260
+ D+WS G ILY + G PF + AI+ EI+F P +D++
Sbjct: 218 PKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP----EKDLQDVL 273
Query: 261 RRMLTKDPKRRITAAQVLEHPWLR 284
+ L +DPK+RI+ ++L HP+++
Sbjct: 274 KCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 43/242 (17%)
Query: 80 LSGQPNVVEFKSTYEDETA--VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L G PN++ +D + +V E D F ++ ++ D + I+ A+
Sbjct: 87 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQTL--TDYDIRFYMYEILKAL 143
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV 197
+ CHSMG+MHRD+KP N + ++ L++ D+G A + GQ Y V S ++ PE+
Sbjct: 144 DYCHSMGIMHRDVKPHN--VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 201
Query: 198 L--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKK-----------GT---YDAILQGE 241
L + Y +D+WS G +L ++ PF+ GT YD I +
Sbjct: 202 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261
Query: 242 IDFDT-----------DPWPS---------ISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281
I+ D W +S A D + ++L D + R+TA + +EHP
Sbjct: 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 321
Query: 282 WL 283
+
Sbjct: 322 YF 323
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 27/204 (13%)
Query: 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFI 158
+++VME C DL + K + + + ++ AV+ H G++H DLKP NF +
Sbjct: 131 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV 189
Query: 159 SRDDNALLKVTDFGSA--LLFEEGQVYRDI-VGSGFYIAPEVLR-----RRYG------- 203
+ +LK+ DFG A + + V +D VG+ Y+ PE ++ R G
Sbjct: 190 ----DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKIS 245
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKK-GTYDAIL--QGEIDFDTDPWPSISSTAKDLV 260
+ D+WS G ILY + G PF + AI+ EI+F P + +D++
Sbjct: 246 PKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL----QDVL 301
Query: 261 RRMLTKDPKRRITAAQVLEHPWLR 284
+ L +DPK+RI+ ++L HP+++
Sbjct: 302 KCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 43/242 (17%)
Query: 80 LSGQPNVVEFKSTYEDETA--VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L G PN++ +D + +V E D F ++ ++ D + I+ A+
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQTL--TDYDIRFYMYEILKAL 144
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV 197
+ CHSMG+MHRD+KP N + ++ L++ D+G A + GQ Y V S ++ PE+
Sbjct: 145 DYCHSMGIMHRDVKPHN--VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 198 L--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKK-----------GT---YDAILQGE 241
L + Y +D+WS G +L ++ PF+ GT YD I +
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 242 IDFDT-----------DPWPS---------ISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281
I+ D W +S A D + ++L D + R+TA + +EHP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 282 WL 283
+
Sbjct: 323 YF 324
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 43/242 (17%)
Query: 80 LSGQPNVVEFKSTYEDETA--VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L G PN++ +D + +V E D F ++ ++ D + I+ A+
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQTL--TDYDIRFYMYEILKAL 144
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV 197
+ CHSMG+MHRD+KP N + ++ L++ D+G A + GQ Y V S ++ PE+
Sbjct: 145 DYCHSMGIMHRDVKPHN--VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 198 L--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKK-----------GT---YDAILQGE 241
L + Y +D+WS G +L ++ PF+ GT YD I +
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 242 IDFDT-----------DPWPS---------ISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281
I+ D W +S A D + ++L D + R+TA + +EHP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 282 WL 283
+
Sbjct: 323 YF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 43/242 (17%)
Query: 80 LSGQPNVVEFKSTYEDETA--VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L G PN++ +D + +V E D F ++ ++ D + I+ A+
Sbjct: 87 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQTL--TDYDIRFYMYEILKAL 143
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV 197
+ CHSMG+MHRD+KP N + ++ L++ D+G A + GQ Y V S ++ PE+
Sbjct: 144 DYCHSMGIMHRDVKPHN--VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 201
Query: 198 L--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKK-----------GT---YDAILQGE 241
L + Y +D+WS G +L ++ PF+ GT YD I +
Sbjct: 202 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261
Query: 242 IDFDT-----------DPWPS---------ISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281
I+ D W +S A D + ++L D + R+TA + +EHP
Sbjct: 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 321
Query: 282 WL 283
+
Sbjct: 322 YF 323
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 43/242 (17%)
Query: 80 LSGQPNVVEFKSTYEDETA--VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L G PN++ +D + +V E D F ++ ++ D + I+ A+
Sbjct: 86 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQTL--TDYDIRFYMYEILKAL 142
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV 197
+ CHSMG+MHRD+KP N + ++ L++ D+G A + GQ Y V S ++ PE+
Sbjct: 143 DYCHSMGIMHRDVKPHN--VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 200
Query: 198 L--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKK-----------GT---YDAILQGE 241
L + Y +D+WS G +L ++ PF+ GT YD I +
Sbjct: 201 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 260
Query: 242 IDFDT-----------DPWPS---------ISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281
I+ D W +S A D + ++L D + R+TA + +EHP
Sbjct: 261 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 320
Query: 282 WL 283
+
Sbjct: 321 YF 322
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 112/254 (44%), Gaps = 19/254 (7%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LGRG FG + + T A K K+RL ++ R E + P +V
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVK------KVRL---EVFRAEELMACAGLTSPRIVPLY 151
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
+ V++ MEL EGG L + +G E A L + + HS ++H D+
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDV 211
Query: 151 KPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD------IVGSGFYIAPE-VLRRRYG 203
K +N S +A L DFG A+ + + + I G+ ++APE VL R
Sbjct: 212 KADNVLLSSDGSHAAL--CDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCD 269
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
++D+WS+ ++ +L+G P W + +G + E + PS + ++
Sbjct: 270 AKVDVWSSCCMMLHMLNGCHP-WTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEG 328
Query: 264 LTKDPKRRITAAQV 277
L K+P R++AA++
Sbjct: 329 LRKEPIHRVSAAEL 342
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 107/242 (44%), Gaps = 43/242 (17%)
Query: 80 LSGQPNVVEFKSTYEDETA--VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L G PN++ +D + +V E D F ++ + ++ D + I+ A+
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQL--RQTLTDYDIRFYMYEILKAL 144
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV 197
+ CHSMG+MHRD+KP N + ++ L++ D+G A + GQ Y V S ++ PE+
Sbjct: 145 DYCHSMGIMHRDVKPHN--VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 198 L--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKK-----------GT---YDAILQGE 241
L + Y +D+WS G +L ++ PF+ GT YD I +
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 242 IDFDT-----------DPWPS---------ISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281
I+ D W +S A D + ++L D + R+TA + +EHP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 282 WL 283
+
Sbjct: 323 YF 324
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 117/285 (41%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 70
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL D + A + L ++ + CHS V+HR
Sbjct: 71 DVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 129
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 130 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 186
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 187 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 246
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 247 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 138/312 (44%), Gaps = 53/312 (16%)
Query: 14 LGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIA----KKPKMRLAENDM 69
LG Y D+ + LG G G+ + +N ++ A K I + K L E +
Sbjct: 9 LGSRYMDL-------KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKI 61
Query: 70 IRR---EIQIRLYLSGQPNVVEFK---STYEDETAVHVVMELCEGGDLFDRIIAKGYNSE 123
IRR + ++++ P+ + + + +V++V E E DL + ++ +G E
Sbjct: 62 IRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLAN-VLEQGPLLE 119
Query: 124 RDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY 183
A + ++ + HS V+HRDLKP N FI+ +D +LK+ DFG A + + +
Sbjct: 120 EHARLFMYQLLRGLKYIHSANVLHRDLKPANL-FINTED-LVLKIGDFGLARIMDPHYSH 177
Query: 184 RDIVGSG----FYIAPEVL--RRRYGKEIDIWSAGVILYILLSG---------------- 221
+ + G +Y +P +L Y K ID+W+AG I +L+G
Sbjct: 178 KGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI 237
Query: 222 ---VPPFWAETKKGTYDAILQGEIDFDTDP-------WPSISSTAKDLVRRMLTKDPKRR 271
+P E ++ I + T+P P IS A D + ++LT P R
Sbjct: 238 LESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDR 297
Query: 272 ITAAQVLEHPWL 283
+TA + L HP++
Sbjct: 298 LTAEEALSHPYM 309
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 120/294 (40%), Gaps = 48/294 (16%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++G G FGV Y + A K + + + RE+QI L N+V
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQIMRKLD-HCNIVR 77
Query: 89 ----FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA------IVNAVN 138
F S+ E + V++ + L + R+ A+ Y+ + V+ + ++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
HS G+ HRD+KP+N + D A+LK+ DFGSA G+ + S +Y APE++
Sbjct: 137 YIHSFGICHRDIKPQNL--LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 194
Query: 199 --RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ----------------- 239
Y ID+WSAG +L LL G P F ++ I++
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 254
Query: 240 GEIDFD---TDPW-----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
E F PW P A L R+L P R+T + H + E
Sbjct: 255 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 308
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 43/242 (17%)
Query: 80 LSGQPNVVEFKSTYEDETA--VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L G PN++ +D + +V E D F ++ ++ D + I+ A+
Sbjct: 93 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQTL--TDYDIRFYMYEILKAL 149
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV 197
+ CHSMG+MHRD+KP N + ++ L++ D+G A + GQ Y V S ++ PE+
Sbjct: 150 DYCHSMGIMHRDVKPHN--VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 207
Query: 198 L--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKK-----------GT---YDAILQGE 241
L + Y +D+WS G +L ++ PF+ GT YD I +
Sbjct: 208 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 267
Query: 242 IDFDT-----------DPWPS---------ISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281
I+ D W +S A D + ++L D + R+TA + +EHP
Sbjct: 268 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 327
Query: 282 WL 283
+
Sbjct: 328 YF 329
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 46/214 (21%)
Query: 125 DAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR 184
D + ++ A++ CHS G+MHRD+KP N + L++ D+G A + Q Y
Sbjct: 133 DIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKK--LRLIDWGLAEFYHPAQEYN 190
Query: 185 DIVGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ--- 239
V S ++ PE+L + Y +D+WS G +L ++ PF+ + YD +++
Sbjct: 191 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFF--HGQDNYDQLVRIAK 248
Query: 240 -----------GEIDFDTDP-------------WPS---------ISSTAKDLVRRMLTK 266
+ D DP W + +S A DL+ ++L
Sbjct: 249 VLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRY 308
Query: 267 DPKRRITAAQVLEHPW----LRESGEASDDTSVI 296
D ++R+TA + +EHP+ ++E + S D +V+
Sbjct: 309 DHQQRLTAKEAMEHPYFYPVVKEQSQPSADNAVL 342
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 117/285 (41%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 71
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL D + A + L ++ + CHS V+HR
Sbjct: 72 DVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 130
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 131 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 187
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 188 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 247
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 248 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 142/339 (41%), Gaps = 54/339 (15%)
Query: 31 LGRGQFGVSYLCTENSTN---------RPYACKSIAKKPKMRLAENDMIRREIQIRLYLS 81
+G G +G + T RP+ + AK+ L +R E I L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
P+ T +D T ++VM G DL + + +R V + ++ + H
Sbjct: 93 FTPD-----ETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQ-MLKGLRYIH 145
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR- 200
+ G++HRDLKP N + +++ LK+ DFG L + V + +Y APEV+
Sbjct: 146 AAGIIHRDLKPGNLAV---NEDCELKILDFG--LARQADSEMXGXVVTRWYRAPEVILNW 200
Query: 201 -RYGKEIDIWSAGVILYILLSG---------------------VPP--FWAETKKGTYDA 236
RY + +DIWS G I+ +++G PP F +
Sbjct: 201 MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKN 260
Query: 237 ILQGEIDFDTDPWPSI----SSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
++G + + + SI S A +L+ +ML D ++R+TA + L HP+ + D+
Sbjct: 261 YMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDE 320
Query: 293 TSVILRMKQF----RRMNKLKKLTIKVIVEYLPDEETQA 327
V F R +++ K++T K ++ + P + A
Sbjct: 321 PQVQKYDDSFDDVDRTLDEWKRVTYKEVLSFKPPRQLGA 359
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 27/204 (13%)
Query: 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFI 158
+++VME C DL + K + + + ++ AV+ H G++H DLKP NF +
Sbjct: 83 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV 141
Query: 159 SRDDNALLKVTDFGSA--LLFEEGQVYRDI-VGSGFYIAPEVLR-----RRYG------- 203
+ +LK+ DFG A + + V +D VG+ Y+ PE ++ R G
Sbjct: 142 ----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 197
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKK-GTYDAIL--QGEIDFDTDPWPSISSTAKDLV 260
+ D+WS G ILY + G PF + AI+ EI+F P +D++
Sbjct: 198 PKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP----EKDLQDVL 253
Query: 261 RRMLTKDPKRRITAAQVLEHPWLR 284
+ L +DPK+RI+ ++L HP+++
Sbjct: 254 KCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 117/282 (41%), Gaps = 46/282 (16%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G+FG + C + YA K +KKP + RE+ L +VV +
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYF 75
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAK----GYNSERDAATVLRAIVNAVNVCHSMGVM 146
S + ++ + + E C GG L D I Y E + +L + + HSM ++
Sbjct: 76 SAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLV 135
Query: 147 HRDLKPENFSFISR-------------DDNA----LLKVTDFGSALLFEEGQVYRDIVGS 189
H D+KP N FISR DD A + K+ D G QV G
Sbjct: 136 HMDIKPSNI-FISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE---GD 191
Query: 190 GFYIAPEVLRRRYGK--EIDIWSAGVILYILLSGVPPF------WAETKKGTYDAILQGE 241
++A EVL+ Y + DI++ + + + +G P W E ++G I Q
Sbjct: 192 SRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHEIRQGRLPRIPQ-- 248
Query: 242 IDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+S +L++ M+ DP+RR +A +++H L
Sbjct: 249 ---------VLSQEFTELLKVMIHPDPERRPSAMALVKHSVL 281
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 120/294 (40%), Gaps = 48/294 (16%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++G G FGV Y + A K + + + RE+QI L N+V
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQIMRKLD-HCNIVR 77
Query: 89 ----FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA------IVNAVN 138
F S+ E + V++ + L + R+ A+ Y+ + V+ + ++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
HS G+ HRD+KP+N + D A+LK+ DFGSA G+ + S +Y APE++
Sbjct: 137 YIHSFGICHRDIKPQNL--LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 194
Query: 199 --RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ----------------- 239
Y ID+WSAG +L LL G P F ++ I++
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 254
Query: 240 GEIDFD---TDPW-----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
E F PW P A L R+L P R+T + H + E
Sbjct: 255 TEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 308
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 117/282 (41%), Gaps = 46/282 (16%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G+FG + C + YA K +KKP + RE+ L +VV +
Sbjct: 19 IGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYF 77
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAK----GYNSERDAATVLRAIVNAVNVCHSMGVM 146
S + ++ + + E C GG L D I Y E + +L + + HSM ++
Sbjct: 78 SAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLV 137
Query: 147 HRDLKPENFSFISR-------------DDNA----LLKVTDFGSALLFEEGQVYRDIVGS 189
H D+KP N FISR DD A + K+ D G QV G
Sbjct: 138 HMDIKPSNI-FISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE---GD 193
Query: 190 GFYIAPEVLRRRYGK--EIDIWSAGVILYILLSGVPPF------WAETKKGTYDAILQGE 241
++A EVL+ Y + DI++ + + + +G P W E ++G I Q
Sbjct: 194 SRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHEIRQGRLPRIPQ-- 250
Query: 242 IDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+S +L++ M+ DP+RR +A +++H L
Sbjct: 251 ---------VLSQEFTELLKVMIHPDPERRPSAMALVKHSVL 283
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 119/296 (40%), Gaps = 52/296 (17%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++G G FGV Y + A K + + + RE+QI L N+V
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQIMRKLD-HCNIVR 77
Query: 89 FKSTY------EDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA------IVNA 136
+ + +DE +++V++ +A+ Y+ + V+ + +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYR---VARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 137 VNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPE 196
+ HS G+ HRD+KP+N + D A+LK+ DFGSA G+ + S +Y APE
Sbjct: 135 LAYIHSFGICHRDIKPQNL--LLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 192
Query: 197 VL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ--------------- 239
++ Y ID+WSAG +L LL G P F ++ I++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 240 --GEIDFD---TDPW-----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
E F PW P A L R+L P R+T + H + E
Sbjct: 253 NYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 308
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 117/282 (41%), Gaps = 46/282 (16%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G+FG + C + YA K +KKP + RE+ L +VV +
Sbjct: 15 IGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYF 73
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAK----GYNSERDAATVLRAIVNAVNVCHSMGVM 146
S + ++ + + E C GG L D I Y E + +L + + HSM ++
Sbjct: 74 SAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLV 133
Query: 147 HRDLKPENFSFISR-------------DDNA----LLKVTDFGSALLFEEGQVYRDIVGS 189
H D+KP N FISR DD A + K+ D G QV G
Sbjct: 134 HMDIKPSNI-FISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE---GD 189
Query: 190 GFYIAPEVLRRRYGK--EIDIWSAGVILYILLSGVPPF------WAETKKGTYDAILQGE 241
++A EVL+ Y + DI++ + + + +G P W E ++G I Q
Sbjct: 190 SRFLANEVLQENYTHLPKADIFALALTV-VXAAGAEPLPRNGDQWHEIRQGRLPRIPQ-- 246
Query: 242 IDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+S +L++ M+ DP+RR +A +++H L
Sbjct: 247 ---------VLSQEFTELLKVMIHPDPERRPSAMALVKHSVL 279
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 117/282 (41%), Gaps = 46/282 (16%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G+FG + C + YA K +KKP + RE+ L +VV +
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYF 75
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAK----GYNSERDAATVLRAIVNAVNVCHSMGVM 146
S + ++ + + E C GG L D I Y E + +L + + HSM ++
Sbjct: 76 SAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLV 135
Query: 147 HRDLKPENFSFISR-------------DDNA----LLKVTDFGSALLFEEGQVYRDIVGS 189
H D+KP N FISR DD A + K+ D G QV G
Sbjct: 136 HMDIKPSNI-FISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE---GD 191
Query: 190 GFYIAPEVLRRRYGK--EIDIWSAGVILYILLSGVPPF------WAETKKGTYDAILQGE 241
++A EVL+ Y + DI++ + + + +G P W E ++G I Q
Sbjct: 192 SRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHEIRQGRLPRIPQ-- 248
Query: 242 IDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+S +L++ M+ DP+RR +A +++H L
Sbjct: 249 ---------VLSQEFTELLKVMIHPDPERRPSAMALVKHSVL 281
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 122/275 (44%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ A +++ ++ + G NV + + E+ V++VMEL +
Sbjct: 58 SRPFQNQTHAKR-----AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD 112
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + + + +V + HS G++HRDLKP N I +A LK
Sbjct: 113 AN--LSQVIQMELDHERMSYLLYQMLV-GIKHLHSAGIIHRDLKPSN---IVVKSDATLK 166
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFW 226
+ DFG A + V + +Y APEV L Y + +DIWS GVI+ ++ G F
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFP 226
Query: 227 AETKKGTYDAILQ----GEIDFDTDPWPSI------------------------------ 252
++ +++ +F P++
Sbjct: 227 GTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH 286
Query: 253 ----SSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+S A+DL+ +ML D +RI+ + L+HP++
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 122/275 (44%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ A +++ ++ + G NV + + E+ V++VMEL +
Sbjct: 58 SRPFQNQTHAKR-----AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD 112
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + + + +V + HS G++HRDLKP N I +A LK
Sbjct: 113 AN--LSQVIQMELDHERMSYLLYQMLV-GIKHLHSAGIIHRDLKPSN---IVVKSDATLK 166
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFW 226
+ DFG A + V + +Y APEV L Y + +DIWS GVI+ ++ G F
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFP 226
Query: 227 AETKKGTYDAILQ----GEIDFDTDPWPSI------------------------------ 252
++ +++ +F P++
Sbjct: 227 GTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH 286
Query: 253 ----SSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+S A+DL+ +ML D +RI+ + L+HP++
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 69
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 70 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 128
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKPEN + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 129 DLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 185
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 186 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 245
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 246 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 70
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 71 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 129
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKPEN + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 130 DLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 186
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 187 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 246
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 247 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 131/309 (42%), Gaps = 42/309 (13%)
Query: 1 MGCSVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKP 60
+G + ++Q D +G+ E L R+L G F Y + + R YA K +
Sbjct: 7 LGGASGRDQSD-FVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE 65
Query: 61 KMRLAENDMIRREIQIRLYLSGQPNVVEFKSTY-----EDETA---VHVVMELCEGG--D 110
+ + N I +E+ LSG PN+V+F S E +T ++ ELC+G +
Sbjct: 66 EEK---NRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVE 122
Query: 111 LFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM--GVMHRDLKPENFSFISRDDNALLKV 168
++ ++G S + AV H ++HRDLK EN + +K+
Sbjct: 123 FLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL---SNQGTIKL 179
Query: 169 TDFGSALLFEEGQVY------RDIV-------GSGFYIAPEVL----RRRYGKEIDIWSA 211
DFGSA Y R +V + Y PE++ G++ DIW+
Sbjct: 180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWAL 239
Query: 212 GVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRR 271
G ILY+L PF + G I+ G+ + P + + L+R ML +P+ R
Sbjct: 240 GCILYLLCFRQHPF----EDGAKLRIVNGK--YSIPPHDTQYTVFHSLIRAMLQVNPEER 293
Query: 272 ITAAQVLEH 280
++ A+V+
Sbjct: 294 LSIAEVVHQ 302
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 117/285 (41%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 68
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ ++ CHS V+HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHR 127
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 128 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 184
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 75/186 (40%), Gaps = 36/186 (19%)
Query: 133 IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGF 191
++ + CH ++HRDLKP+N R LK+ DFG A F + V + +
Sbjct: 117 LLQGLAFCHENKILHRDLKPQNLLINKRGQ---LKLGDFGLARAFGIPVNTFSSEVVTLW 173
Query: 192 YIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPW 249
Y AP+VL R Y IDIWS G IL +++G P F + I + W
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLW 233
Query: 250 PSISSTAK------------------------------DLVRRMLTKDPKRRITAAQVLE 279
PS++ K D + +L +P R++A Q L
Sbjct: 234 PSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293
Query: 280 HPWLRE 285
HPW E
Sbjct: 294 HPWFAE 299
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 69
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 70 DVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 128
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKPEN + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 129 DLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 185
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 186 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 245
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 246 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 71
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 72 DVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 130
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKPEN + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 131 DLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 187
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 188 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 247
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 248 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 68
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVL--RRRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 128 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTA 184
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 68
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 128 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 184
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 123/317 (38%), Gaps = 70/317 (22%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYL-SGQPN---- 85
LG G FG C ++ + I K R E R EIQ+ +L + PN
Sbjct: 22 LGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCE--AARSEIQVLEHLNTTDPNSTFR 78
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSER--DAATVLRAIVNAVNVCHSM 143
V+ +E + +V EL G +D I G+ R + I +VN HS
Sbjct: 79 CVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN 137
Query: 144 GVMHRDLKPENFSF------------ISRDDNAL----LKVTDFGSALLFEEGQVYRDIV 187
+ H DLKPEN F I RD+ L +KV DFGSA +E + +V
Sbjct: 138 KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH--HSTLV 195
Query: 188 GSGFYIAPEV-LRRRYGKEIDIWSAGVIL---YILLSGVPPFWAETKKGTYDAIL----- 238
+ Y APEV L + + D+WS G IL Y+ + P ++ + IL
Sbjct: 196 STRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPK 255
Query: 239 --------QGEIDFDTDPWPSISSTAK------------------------DLVRRMLTK 266
+ D W SS + DL+++ML
Sbjct: 256 HMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEY 315
Query: 267 DPKRRITAAQVLEHPWL 283
DP +RIT + L+HP+
Sbjct: 316 DPAKRITLREALKHPFF 332
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 75
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 76 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 134
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVL--RRRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 135 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTA 191
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 192 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 251
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 252 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 69
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 70 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 128
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 129 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 185
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 186 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 245
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 246 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 69
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 70 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 128
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 129 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 185
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 186 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 245
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 246 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 67
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 68 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 126
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 127 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 183
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 184 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 243
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 244 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 68
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 128 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 184
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 71
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 72 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 130
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 131 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 187
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 188 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 247
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 248 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 69
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 70 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 128
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 129 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 185
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 186 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 245
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 246 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 71
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 72 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 130
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 131 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 187
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 188 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 247
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 248 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 70
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 71 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 129
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 130 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 186
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 187 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 246
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 247 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 67
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 68 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 126
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 127 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 183
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 184 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 243
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 244 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 68
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 128 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 184
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 68
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 128 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 184
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 70
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 71 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 129
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 130 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 186
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 187 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 246
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 247 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 68
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 128 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 184
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 72
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 73 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 131
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 132 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 188
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 189 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 248
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 249 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 67
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 68 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 126
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 127 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 183
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 184 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 243
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 244 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 68
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 128 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 184
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 67
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 68 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 126
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 127 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 183
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 184 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 243
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 244 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 71
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 72 DVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 130
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 131 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 187
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 188 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 247
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 248 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 72
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 73 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 131
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 132 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 188
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 189 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 248
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 249 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 75
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 76 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 134
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 135 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 191
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 192 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 251
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 252 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 117/275 (42%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ L + + I L NV + T E+ V++VMEL +
Sbjct: 58 SRPFQNQTHAKRAYRELVLMKXVNHKNIISLL-----NVFTPQKTLEEFQDVYLVMELMD 112
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I + LK
Sbjct: 113 AN--LXQVIQMELDHER-MSYLLYQMLXGIKHLHSAGIIHRDLKPSN---IVVKSDXTLK 166
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVIL------YILLS 220
+ DFG A + V + +Y APEV L Y + +DIWS G I+ IL
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 221 G-----------------VPPFWAETKKGTYDAI--------LQGEIDFDTDPWPSIS-- 253
G P F + + + + L F +P+ S
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 286
Query: 254 -----STAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
S A+DL+ +ML DP +RI+ L+HP++
Sbjct: 287 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 126/312 (40%), Gaps = 64/312 (20%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEND------MIRREIQIRLYLSGQP 84
+G+G FG + T + A K + L EN+ REI+I L L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV-------LMENEKEGFPITALREIKI-LQLLKHE 77
Query: 85 NVVEF-------KSTYED-ETAVHVVMELCEG--GDLFDRIIAKGYNSERDAATVLRAIV 134
NVV S Y + ++++V + CE L ++ K SE V++ ++
Sbjct: 78 NVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQMLL 135
Query: 135 NAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-----EGQVYRDIVGS 189
N + H ++HRD+K N I+RD +LK+ DFG A F + Y + V +
Sbjct: 136 NGLYYIHRNKILHRDMKAANV-LITRD--GVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 190 GFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD 247
+Y PE+L R YG ID+W AG I+ + + P T++ I Q +
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
Query: 248 PWPSISS----------------------------TAKDLVRRMLTKDPKRRITAAQVLE 279
WP++ + A DL+ ++L DP +RI + L
Sbjct: 253 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 312
Query: 280 HPWLRESGEASD 291
H + SD
Sbjct: 313 HDFFWSDPMPSD 324
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 117/275 (42%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ L + + I L NV + T E+ V++VMEL +
Sbjct: 58 SRPFQNQTHAKRAYRELVLMKCVNHKNIISLL-----NVFTPQKTLEEFQDVYLVMELMD 112
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I + LK
Sbjct: 113 AN--LXQVIQMELDHER-MSYLLYQMLXGIKHLHSAGIIHRDLKPSN---IVVKSDXTLK 166
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVIL------YILLS 220
+ DFG A + V + +Y APEV L Y + +DIWS G I+ IL
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 221 G-----------------VPPFWAETKKGTYDAI--------LQGEIDFDTDPWPSIS-- 253
G P F + + + + L F +P+ S
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 286
Query: 254 -----STAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
S A+DL+ +ML DP +RI+ L+HP++
Sbjct: 287 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 121/275 (44%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ A +++ ++ + G NV + + E+ V++VMEL +
Sbjct: 58 SRPFQNQTHAKR-----AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD 112
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + + + +V + HS G++HRDLKP N I +A LK
Sbjct: 113 AN--LSQVIQMELDHERMSYLLYQMLV-GIKHLHSAGIIHRDLKPSN---IVVKSDATLK 166
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFW 226
+ DFG A + V + +Y APEV L Y + +DIWS G I+ ++ G F
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP 226
Query: 227 AETKKGTYDAILQ----GEIDFDTDPWPSI------------------------------ 252
++ +++ +F P++
Sbjct: 227 GTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH 286
Query: 253 ----SSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+S A+DL+ +ML D +RI+ + L+HP++
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 110/248 (44%), Gaps = 39/248 (15%)
Query: 72 REIQIRLYLSG--QPNVVEF-----KSTYEDETAVHVVMELCEGGDL---FDRIIAKGYN 121
RE+ + +L PNVV S + ET + +V E + DL D++ G
Sbjct: 60 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVP 118
Query: 122 SERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181
+E ++ ++ ++ HS V+HRDLKP+N S + +K+ DFG A ++
Sbjct: 119 TE-TIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADFGLARIYSFQM 174
Query: 182 VYRDIVGSGFYIAPEVL-RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ- 239
+V + +Y APEVL + Y +D+WS G I + P F + IL
Sbjct: 175 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDV 234
Query: 240 ----GEIDFDTD---PWPSISSTA---------------KDLVRRMLTKDPKRRITAAQV 277
GE D+ D P + S + KDL+ + LT +P +RI+A
Sbjct: 235 IGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 294
Query: 278 LEHPWLRE 285
L HP+ ++
Sbjct: 295 LSHPYFQD 302
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 121/275 (44%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ A +++ ++ + G NV + + E+ V++VMEL +
Sbjct: 58 SRPFQNQTHAKR-----AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD 112
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I +A LK
Sbjct: 113 AN--LSQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDATLK 166
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFW 226
+ DFG A + V + +Y APEV L Y + +DIWS G I+ ++ G F
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP 226
Query: 227 AETKKGTYDAILQ----GEIDFDTDPWPSI------------------------------ 252
++ +++ +F P++
Sbjct: 227 GTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH 286
Query: 253 ----SSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+S A+DL+ +ML D +RI+ + L+HP++
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 117/275 (42%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ L + + I L NV + T E+ V++VMEL +
Sbjct: 96 SRPFQNQTHAKRAYRELVLMKCVNHKNIISLL-----NVFTPQKTLEEFQDVYLVMELMD 150
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I + LK
Sbjct: 151 AN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDCTLK 204
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVIL------YILLS 220
+ DFG A + V + +Y APEV L Y + +DIWS G I+ IL
Sbjct: 205 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 264
Query: 221 G-----------------VPPFWAETKKGTYDAI--------LQGEIDFDTDPWPSIS-- 253
G P F + + + + L F +P+ S
Sbjct: 265 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 324
Query: 254 -----STAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
S A+DL+ +ML DP +RI+ L+HP++
Sbjct: 325 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 134/298 (44%), Gaps = 42/298 (14%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQ 83
R +G G +G + + A K +++ P L RE+++ +L G
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSR-PFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
+V ++ ED + V++V L G DL + I+ S+ ++ ++ + HS
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLM-GADL-NNIVKSQALSDEHVQFLVYQLLRGLKYIHSA 150
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--R 201
G++HRDLKP N ++ ++++ L++ DFG A +E V + +Y APE++
Sbjct: 151 GIIHRDLKPSN---VAVNEDSELRILDFGLARQADEEMT--GYVATRWYRAPEIMLNWMH 205
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWA-----ETKK-----GTYDAILQGEIDFD------ 245
Y + +DIWS G I+ LL G F + K+ GT + +I +
Sbjct: 206 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYI 265
Query: 246 --TDPWPS--ISST-------AKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
P P +SS A DL+ RML D +R++AA+ L H + + + D+
Sbjct: 266 QSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDE 323
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 117/275 (42%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ L + + I L NV + T E+ V++VMEL +
Sbjct: 58 SRPFQNQTHAKRAYRELVLMKXVNHKNIISLL-----NVFTPQKTLEEFQDVYLVMELMD 112
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I + LK
Sbjct: 113 AN--LXQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDXTLK 166
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVIL------YILLS 220
+ DFG A + V + +Y APEV L Y + +DIWS G I+ IL
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 221 G-----------------VPPFWAETKKGTYDAI--------LQGEIDFDTDPWPSIS-- 253
G P F + + + + L F +P+ S
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 286
Query: 254 -----STAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
S A+DL+ +ML DP +RI+ L+HP++
Sbjct: 287 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 117/285 (41%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 71
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E + DL + A + L ++ + CHS V+HR
Sbjct: 72 DVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 130
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 131 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 187
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 188 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 247
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 248 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 117/275 (42%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ L + + I L NV + T E+ V++VMEL +
Sbjct: 51 SRPFQNQTHAKRAYRELVLMKCVNHKNIISLL-----NVFTPQKTLEEFQDVYLVMELMD 105
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I + LK
Sbjct: 106 AN--LXQVIQMELDHER-MSYLLYQMLXGIKHLHSAGIIHRDLKPSN---IVVKSDXTLK 159
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVIL------YILLS 220
+ DFG A + V + +Y APEV L Y + +DIWS G I+ IL
Sbjct: 160 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 219
Query: 221 G-----------------VPPFWAETKKGTYDAI--------LQGEIDFDTDPWPSIS-- 253
G P F + + + + L F +P+ S
Sbjct: 220 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 279
Query: 254 -----STAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
S A+DL+ +ML DP +RI+ L+HP++
Sbjct: 280 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 117/275 (42%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ L + + I L NV + T E+ V++VMEL +
Sbjct: 96 SRPFQNQTHAKRAYRELVLMKCVNHKNIISLL-----NVFTPQKTLEEFQDVYLVMELMD 150
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I + LK
Sbjct: 151 AN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDCTLK 204
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVIL------YILLS 220
+ DFG A + V + +Y APEV L Y + +DIWS G I+ IL
Sbjct: 205 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 264
Query: 221 G-----------------VPPFWAETKKGTYDAI--------LQGEIDFDTDPWPSIS-- 253
G P F + + + + L F +P+ S
Sbjct: 265 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 324
Query: 254 -----STAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
S A+DL+ +ML DP +RI+ L+HP++
Sbjct: 325 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 126/312 (40%), Gaps = 64/312 (20%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEND------MIRREIQIRLYLSGQP 84
+G+G FG + T + A K + L EN+ REI+I L L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV-------LMENEKEGFPITALREIKI-LQLLKHE 77
Query: 85 NVVEF-------KSTYED-ETAVHVVMELCEG--GDLFDRIIAKGYNSERDAATVLRAIV 134
NVV S Y + ++++V + CE L ++ K SE V++ ++
Sbjct: 78 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQMLL 135
Query: 135 NAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-----EGQVYRDIVGS 189
N + H ++HRD+K N I+RD +LK+ DFG A F + Y + V +
Sbjct: 136 NGLYYIHRNKILHRDMKAANV-LITRD--GVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 190 GFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD 247
+Y PE+L R YG ID+W AG I+ + + P T++ I Q +
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
Query: 248 PWPSISS----------------------------TAKDLVRRMLTKDPKRRITAAQVLE 279
WP++ + A DL+ ++L DP +RI + L
Sbjct: 253 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 312
Query: 280 HPWLRESGEASD 291
H + SD
Sbjct: 313 HDFFWSDPMPSD 324
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 126/312 (40%), Gaps = 64/312 (20%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEND------MIRREIQIRLYLSGQP 84
+G+G FG + T + A K + L EN+ REI+I L L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKV-------LMENEKEGFPITALREIKI-LQLLKHE 76
Query: 85 NVVEF-------KSTYED-ETAVHVVMELCEG--GDLFDRIIAKGYNSERDAATVLRAIV 134
NVV S Y + ++++V + CE L ++ K SE V++ ++
Sbjct: 77 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQMLL 134
Query: 135 NAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-----EGQVYRDIVGS 189
N + H ++HRD+K N I+RD +LK+ DFG A F + Y + V +
Sbjct: 135 NGLYYIHRNKILHRDMKAANV-LITRD--GVLKLADFGLARAFSLAKNSQPNRYXNRVVT 191
Query: 190 GFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD 247
+Y PE+L R YG ID+W AG I+ + + P T++ I Q +
Sbjct: 192 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 251
Query: 248 PWPSISS----------------------------TAKDLVRRMLTKDPKRRITAAQVLE 279
WP++ + A DL+ ++L DP +RI + L
Sbjct: 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311
Query: 280 HPWLRESGEASD 291
H + SD
Sbjct: 312 HDFFWSDPMPSD 323
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 117/275 (42%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ L + + I L NV + T E+ V++VMEL +
Sbjct: 59 SRPFQNQTHAKRAYRELVLMKCVNHKNIISLL-----NVFTPQKTLEEFQDVYLVMELMD 113
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I + LK
Sbjct: 114 AN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDCTLK 167
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVIL------YILLS 220
+ DFG A + V + +Y APEV L Y + +DIWS G I+ IL
Sbjct: 168 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 227
Query: 221 G-----------------VPPFWAETKKGTYDAI--------LQGEIDFDTDPWPSIS-- 253
G P F + + + + L F +P+ S
Sbjct: 228 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 287
Query: 254 -----STAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
S A+DL+ +ML DP +RI+ L+HP++
Sbjct: 288 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 122/317 (38%), Gaps = 70/317 (22%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYL-SGQPN---- 85
LG G FG C ++ + I K R E R EIQ+ +L + PN
Sbjct: 22 LGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCE--AARSEIQVLEHLNTTDPNSTFR 78
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSER--DAATVLRAIVNAVNVCHSM 143
V+ +E + +V EL G +D I G+ R + I +VN HS
Sbjct: 79 CVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN 137
Query: 144 GVMHRDLKPENFSF------------ISRDDNAL----LKVTDFGSALLFEEGQVYRDIV 187
+ H DLKPEN F I RD+ L +KV DFGSA +E + +V
Sbjct: 138 KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH--HSTLV 195
Query: 188 GSGFYIAPEV-LRRRYGKEIDIWSAGVIL---YILLSGVPPFWAETKKGTYDAIL----- 238
Y APEV L + + D+WS G IL Y+ + P ++ + IL
Sbjct: 196 XXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPK 255
Query: 239 --------QGEIDFDTDPWPSISSTAK------------------------DLVRRMLTK 266
+ D W SS + DL+++ML
Sbjct: 256 HMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEY 315
Query: 267 DPKRRITAAQVLEHPWL 283
DP +RIT + L+HP+
Sbjct: 316 DPAKRITLREALKHPFF 332
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 126/312 (40%), Gaps = 64/312 (20%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEND------MIRREIQIRLYLSGQP 84
+G+G FG + T + A K + L EN+ REI+I L L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV-------LMENEKEGFPITALREIKI-LQLLKHE 77
Query: 85 NVVEF-------KSTYED-ETAVHVVMELCEG--GDLFDRIIAKGYNSERDAATVLRAIV 134
NVV S Y + ++++V + CE L ++ K SE V++ ++
Sbjct: 78 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQMLL 135
Query: 135 NAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-----EGQVYRDIVGS 189
N + H ++HRD+K N I+RD +LK+ DFG A F + Y + V +
Sbjct: 136 NGLYYIHRNKILHRDMKAANV-LITRD--GVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 190 GFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD 247
+Y PE+L R YG ID+W AG I+ + + P T++ I Q +
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
Query: 248 PWPSISS----------------------------TAKDLVRRMLTKDPKRRITAAQVLE 279
WP++ + A DL+ ++L DP +RI + L
Sbjct: 253 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 312
Query: 280 HPWLRESGEASD 291
H + SD
Sbjct: 313 HDFFWSDPMPSD 324
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 117/275 (42%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ L + + I L NV + T E+ V++VMEL +
Sbjct: 57 SRPFQNQTHAKRAYRELVLMKCVNHKNIISLL-----NVFTPQKTLEEFQDVYLVMELMD 111
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I + LK
Sbjct: 112 AN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDCTLK 165
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVIL------YILLS 220
+ DFG A + V + +Y APEV L Y + +DIWS G I+ IL
Sbjct: 166 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 225
Query: 221 G-----------------VPPFWAETKKGTYDAI--------LQGEIDFDTDPWPSIS-- 253
G P F + + + + L F +P+ S
Sbjct: 226 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 285
Query: 254 -----STAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
S A+DL+ +ML DP +RI+ L+HP++
Sbjct: 286 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 320
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 117/275 (42%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ L + + I L NV + T E+ V++VMEL +
Sbjct: 58 SRPFQNQTHAKRAYRELVLMKCVNHKNIISLL-----NVFTPQKTLEEFQDVYLVMELMD 112
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I + LK
Sbjct: 113 AN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDCTLK 166
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVIL------YILLS 220
+ DFG A + V + +Y APEV L Y + +DIWS G I+ IL
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 221 G-----------------VPPFWAETKKGTYDAI--------LQGEIDFDTDPWPSIS-- 253
G P F + + + + L F +P+ S
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 286
Query: 254 -----STAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
S A+DL+ +ML DP +RI+ L+HP++
Sbjct: 287 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 110/248 (44%), Gaps = 39/248 (15%)
Query: 72 REIQIRLYLSG--QPNVVEF-----KSTYEDETAVHVVMELCEGGDL---FDRIIAKGYN 121
RE+ + +L PNVV S + ET + +V E + DL D++ G
Sbjct: 60 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVP 118
Query: 122 SERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181
+E ++ ++ ++ HS V+HRDLKP+N S + +K+ DFG A ++
Sbjct: 119 TE-TIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADFGLARIYSFQM 174
Query: 182 VYRDIVGSGFYIAPEVL-RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ- 239
+V + +Y APEVL + Y +D+WS G I + P F + IL
Sbjct: 175 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDV 234
Query: 240 ----GEIDFDTD---PWPSISSTA---------------KDLVRRMLTKDPKRRITAAQV 277
GE D+ D P + S + KDL+ + LT +P +RI+A
Sbjct: 235 IGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 294
Query: 278 LEHPWLRE 285
L HP+ ++
Sbjct: 295 LSHPYFQD 302
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 117/275 (42%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ L + + I L NV + T E+ V++VMEL +
Sbjct: 58 SRPFQNQTHAKRAYRELVLMKCVNHKNIISLL-----NVFTPQKTLEEFQDVYLVMELMD 112
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I + LK
Sbjct: 113 AN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDCTLK 166
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVIL------YILLS 220
+ DFG A + V + +Y APEV L Y + +DIWS G I+ IL
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 221 G-----------------VPPFWAETKKGTYDAI--------LQGEIDFDTDPWPSIS-- 253
G P F + + + + L F +P+ S
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 286
Query: 254 -----STAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
S A+DL+ +ML DP +RI+ L+HP++
Sbjct: 287 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 117/275 (42%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ L + + I L NV + T E+ V++VMEL +
Sbjct: 58 SRPFQNQTHAKRAYRELVLMKXVNHKNIISLL-----NVFTPQKTLEEFQDVYLVMELMD 112
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I + LK
Sbjct: 113 AN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDXTLK 166
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVIL------YILLS 220
+ DFG A + V + +Y APEV L Y + +DIWS G I+ IL
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 221 G-----------------VPPFWAETKKGTYDAI--------LQGEIDFDTDPWPSIS-- 253
G P F + + + + L F +P+ S
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 286
Query: 254 -----STAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
S A+DL+ +ML DP +RI+ L+HP++
Sbjct: 287 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 117/275 (42%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ L + + I L NV + T E+ V++VMEL +
Sbjct: 59 SRPFQNQTHAKRAYRELVLMKCVNHKNIISLL-----NVFTPQKTLEEFQDVYLVMELMD 113
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I + LK
Sbjct: 114 AN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDCTLK 167
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVIL------YILLS 220
+ DFG A + V + +Y APEV L Y + +DIWS G I+ IL
Sbjct: 168 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 227
Query: 221 G-----------------VPPFWAETKKGTYDAI--------LQGEIDFDTDPWPSIS-- 253
G P F + + + + L F +P+ S
Sbjct: 228 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 287
Query: 254 -----STAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
S A+DL+ +ML DP +RI+ L+HP++
Sbjct: 288 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 117/275 (42%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ L + + I L NV + T E+ V++VMEL +
Sbjct: 51 SRPFQNQTHAKRAYRELVLMKCVNHKNIISLL-----NVFTPQKTLEEFQDVYLVMELMD 105
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I + LK
Sbjct: 106 AN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDCTLK 159
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVIL------YILLS 220
+ DFG A + V + +Y APEV L Y + +DIWS G I+ IL
Sbjct: 160 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 219
Query: 221 G-----------------VPPFWAETKKGTYDAI--------LQGEIDFDTDPWPSIS-- 253
G P F + + + + L F +P+ S
Sbjct: 220 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 279
Query: 254 -----STAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
S A+DL+ +ML DP +RI+ L+HP++
Sbjct: 280 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 117/275 (42%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ L + + I L NV + T E+ V++VMEL +
Sbjct: 52 SRPFQNQTHAKRAYRELVLMKCVNHKNIISLL-----NVFTPQKTLEEFQDVYLVMELMD 106
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I + LK
Sbjct: 107 AN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDCTLK 160
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVIL------YILLS 220
+ DFG A + V + +Y APEV L Y + +DIWS G I+ IL
Sbjct: 161 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 220
Query: 221 G-----------------VPPFWAETKKGTYDAI--------LQGEIDFDTDPWPSIS-- 253
G P F + + + + L F +P+ S
Sbjct: 221 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 280
Query: 254 -----STAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
S A+DL+ +ML DP +RI+ L+HP++
Sbjct: 281 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 67
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 68 DVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 126
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 127 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 183
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 184 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 243
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 244 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 148/334 (44%), Gaps = 52/334 (15%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQ 83
R +G G +G + + A K +++ P L RE+++ +L G
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQKVAVKKLSR-PFQSLIHARRTYRELRLLKHLKHENVIGL 84
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
+V ++ ED + V++V L G DL + + + + E V + ++ + HS
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQALSDEHVQFLVYQ-LLRGLKYIHSA 142
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--R 201
G++HRDLKP N ++ +++ L++ DFG A +E V + +Y APE++
Sbjct: 143 GIIHRDLKPSN---VAVNEDCELRILDFGLARQADEEMT--GYVATRWYRAPEIMLNWMH 197
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWA-----ETKK-----GTYDAILQGEIDFD------ 245
Y + +DIWS G I+ LL G F + K+ GT + +I +
Sbjct: 198 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYI 257
Query: 246 --TDPWPS--ISST-------AKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD--- 291
P P +SS A DL+ RML D +R++AA+ L H + + + D
Sbjct: 258 QSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEPE 317
Query: 292 ----DTSVILRMKQFRRMNKLKKLTIKVIVEYLP 321
D SV + R + + K+LT + ++ + P
Sbjct: 318 AEPYDESV---EAKERTLEEWKELTYQEVLSFKP 348
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 143/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 147 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 201
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 262 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
R + F +++ K LT ++ ++P
Sbjct: 321 DPRDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 42/197 (21%)
Query: 125 DAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR 184
D + ++ A++ CHS G+MHRD+KP N + L++ D+G A + Q Y
Sbjct: 138 DIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKK--LRLIDWGLAEFYHPAQEYN 195
Query: 185 DIVGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ--- 239
V S ++ PE+L + Y +D+WS G +L ++ PF+ + YD +++
Sbjct: 196 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFF--HGQDNYDQLVRIAK 253
Query: 240 -----------GEIDFDTDP-------------WPS---------ISSTAKDLVRRMLTK 266
+ D DP W + +S A DL+ ++L
Sbjct: 254 VLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRY 313
Query: 267 DPKRRITAAQVLEHPWL 283
D ++R+TA + +EHP+
Sbjct: 314 DHQQRLTAKEAMEHPYF 330
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 117/275 (42%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ L + + I L NV + T E+ V++VMEL +
Sbjct: 52 SRPFQNQTHAKRAYRELVLMKCVNHKNIISLL-----NVFTPQKTLEEFQDVYLVMELMD 106
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I + LK
Sbjct: 107 AN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDCTLK 160
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVIL------YILLS 220
+ DFG A + V + +Y APEV L Y + +DIWS G I+ IL
Sbjct: 161 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 220
Query: 221 G-----------------VPPFWAETKKGTYDAI--------LQGEIDFDTDPWPSIS-- 253
G P F + + + + L F +P+ S
Sbjct: 221 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 280
Query: 254 -----STAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
S A+DL+ +ML DP +RI+ L+HP++
Sbjct: 281 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 134/298 (44%), Gaps = 42/298 (14%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQ 83
R +G G +G + + A K +++ P L RE+++ +L G
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSR-PFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
+V ++ ED + V++V L G DL + + + + E V + ++ + HS
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQALSDEHVQFLVYQ-LLRGLKYIHSA 150
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--R 201
G++HRDLKP N ++ ++++ L++ DFG A +E V + +Y APE++
Sbjct: 151 GIIHRDLKPSN---VAVNEDSELRILDFGLARQADEEMT--GYVATRWYRAPEIMLNWMH 205
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWA-----ETKK-----GTYDAILQGEIDFD------ 245
Y + +DIWS G I+ LL G F + K+ GT + +I +
Sbjct: 206 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYI 265
Query: 246 --TDPWPS--ISST-------AKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
P P +SS A DL+ RML D +R++AA+ L H + + + D+
Sbjct: 266 QSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDE 323
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 109/247 (44%), Gaps = 39/247 (15%)
Query: 72 REIQIRLYLSG--QPNVVEF-----KSTYEDETAVHVVMELCEGGDL---FDRIIAKGYN 121
RE+ + +L PNVV S + ET + +V E + DL D++ G
Sbjct: 60 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVP 118
Query: 122 SERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181
+E ++ ++ ++ HS V+HRDLKP+N S + +K+ DFG A ++
Sbjct: 119 TE-TIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADFGLARIYSFQM 174
Query: 182 VYRDIVGSGFYIAPEVL-RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ- 239
+V + +Y APEVL + Y +D+WS G I + P F + IL
Sbjct: 175 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDV 234
Query: 240 ----GEIDFDTD---PWPSISSTA---------------KDLVRRMLTKDPKRRITAAQV 277
GE D+ D P + S + KDL+ + LT +P +RI+A
Sbjct: 235 IGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 294
Query: 278 LEHPWLR 284
L HP+ +
Sbjct: 295 LSHPYFQ 301
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 115/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A I + + IR EI + L+ PN+V+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 68
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 128 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 184
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 115/285 (40%), Gaps = 36/285 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A I + + IR EI + L+ PN+V+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 67
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL + A + L ++ + CHS V+HR
Sbjct: 68 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 126
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR--RRYGKE 205
DLKP+N + +K+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 127 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 183
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST---------- 255
+DIWS G I +++ F +++ I + D WP ++S
Sbjct: 184 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 243
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+ +ML DP +RI+A L HP+ ++
Sbjct: 244 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 120/275 (43%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ A +++ + + G NV + + E+ V++VMEL +
Sbjct: 58 SRPFQNQTHAKR-----AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD 112
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I +A LK
Sbjct: 113 AN--LSQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDATLK 166
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFW 226
+ DFG A + V + +Y APEV L Y + +DIWS G I+ ++ G F
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP 226
Query: 227 AETKKGTYDAILQ----GEIDFDTDPWPSI------------------------------ 252
++ +++ +F P++
Sbjct: 227 GTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH 286
Query: 253 ----SSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+S A+DL+ +ML D +RI+ + L+HP++
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 147 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMA--GFVATRWYRAPEIMLNWMHYN 201
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 262 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 321 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 122/289 (42%), Gaps = 40/289 (13%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQI--RLYLSGQPNVVE 88
+G G +G Y + + A KS+ + P RE+ + RL PNVV
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV-RVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 89 F-----KSTYEDETAVHVVMELCEGGDL---FDRIIAKGYNSERDAATVLRAIVNAVNVC 140
S + E V +V E + DL D+ G +E ++R + ++
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAE-TIKDLMRQFLRGLDFL 128
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL-R 199
H+ ++HRDLKPEN S +K+ DFG A ++ +V + +Y APEVL +
Sbjct: 129 HANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQ 185
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKK----GTYDAI-LQGEIDFDTD------- 247
Y +D+WS G I + P F ++ +D I L E D+ D
Sbjct: 186 STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGA 245
Query: 248 -------PW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
P P + + L+ MLT +P +RI+A + L+H +L +
Sbjct: 246 FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 147 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMA--GFVATRWYRAPEIMLNWMHYN 201
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 262 LAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 321 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 122/289 (42%), Gaps = 40/289 (13%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQI--RLYLSGQPNVVE 88
+G G +G Y + + A KS+ + P RE+ + RL PNVV
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV-RVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 89 F-----KSTYEDETAVHVVMELCEGGDL---FDRIIAKGYNSERDAATVLRAIVNAVNVC 140
S + E V +V E + DL D+ G +E ++R + ++
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAE-TIKDLMRQFLRGLDFL 128
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL-R 199
H+ ++HRDLKPEN S +K+ DFG A ++ +V + +Y APEVL +
Sbjct: 129 HANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQ 185
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKK----GTYDAI-LQGEIDFDTD------- 247
Y +D+WS G I + P F ++ +D I L E D+ D
Sbjct: 186 STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGA 245
Query: 248 -------PW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
P P + + L+ MLT +P +RI+A + L+H +L +
Sbjct: 246 FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 300 KQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSML 359
KQF NK KK ++VI E L +EE LKE F +D DK+G ++++EL+AGL +VG+ L
Sbjct: 1 KQFSAXNKFKKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANL 60
Query: 360 TEFDVKHLMEA--VKNSSTLE 378
E ++ L +A V NS T++
Sbjct: 61 KESEILDLXQAADVDNSGTID 81
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 43/100 (43%)
Query: 376 TLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQYMEAG 435
L + E+L +E L E F +D D S +T SE+ +A
Sbjct: 13 ALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAA 72
Query: 436 DIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNS 475
D+D +G ID EF+ + K+E + L AF Y DK+
Sbjct: 73 DVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDG 112
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 28/260 (10%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89
++GRG FGV +C + A K I + +E E++ +L PN+V+
Sbjct: 15 VVGRGAFGV--VCKAKWRAKDVAIKQIESE-----SERKAFIVELR-QLSRVNHPNIVKL 66
Query: 90 KSTYEDETAVHVVMELCEGGDLFDRIIAK---GYNSERDAATVLRAIVNAVNVCHSM--- 143
+ V +VME EGG L++ + Y + A + V HSM
Sbjct: 67 YGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 124
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRY 202
++HRDLKP N ++ +LK+ DFG+A + GS ++APEV Y
Sbjct: 125 ALIHRDLKPPNLLLVA--GGTVLKICDFGTACDIQTHMTNNK--GSAAWMAPEVFEGSNY 180
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK---DL 259
++ D++S G+IL+ +++ PF + G + + T P P I + K L
Sbjct: 181 SEKCDVFSWGIILWEVITRRKPF---DEIGGPAFRIMWAVHNGTRP-PLIKNLPKPIESL 236
Query: 260 VRRMLTKDPKRRITAAQVLE 279
+ R +KDP +R + ++++
Sbjct: 237 MTRCWSKDPSQRPSMEEIVK 256
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 37/207 (17%)
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVG 188
L ++ + CH V+HRDLKP+N R + LK+ DFG A + Y + V
Sbjct: 106 LFQLLRGLAYCHRQKVLHRDLKPQNLLINERGE---LKLADFGLARAKSIPTKTYDNEVV 162
Query: 189 SGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAET---------------KK 231
+ +Y P++L Y +ID+W G I Y + +G P F T +
Sbjct: 163 TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTE 222
Query: 232 GTYDAILQGEIDFDTDPWPS------------ISSTAKDLVRRMLTKDPKRRITAAQVLE 279
T+ IL E +F T +P + S DL+ ++L + + RI+A ++
Sbjct: 223 ETWPGILSNE-EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281
Query: 280 HPWLRESGEASD---DTSVILRMKQFR 303
HP+ GE DT+ I +K+ +
Sbjct: 282 HPFFLSLGERIHKLPDTTSIFALKEIQ 308
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 28/260 (10%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89
++GRG FGV +C + A K I + +E E++ +L PN+V+
Sbjct: 16 VVGRGAFGV--VCKAKWRAKDVAIKQIESE-----SERKAFIVELR-QLSRVNHPNIVKL 67
Query: 90 KSTYEDETAVHVVMELCEGGDLFDRIIAK---GYNSERDAATVLRAIVNAVNVCHSM--- 143
+ V +VME EGG L++ + Y + A + V HSM
Sbjct: 68 YGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 125
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRY 202
++HRDLKP N ++ +LK+ DFG+A + GS ++APEV Y
Sbjct: 126 ALIHRDLKPPNLLLVA--GGTVLKICDFGTACDIQTHMTNNK--GSAAWMAPEVFEGSNY 181
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK---DL 259
++ D++S G+IL+ +++ PF + G + + T P P I + K L
Sbjct: 182 SEKCDVFSWGIILWEVITRRKPF---DEIGGPAFRIMWAVHNGTRP-PLIKNLPKPIESL 237
Query: 260 VRRMLTKDPKRRITAAQVLE 279
+ R +KDP +R + ++++
Sbjct: 238 MTRCWSKDPSQRPSMEEIVK 257
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 95 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 152
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 153 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 207
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 208 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 267
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 268 LAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 326
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 327 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 356
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 143/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 147 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 201
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 262 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ + F +++ K LT ++ ++P
Sbjct: 321 DPQDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 122/289 (42%), Gaps = 40/289 (13%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQI--RLYLSGQPNVVE 88
+G G +G Y + + A KS+ + P RE+ + RL PNVV
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV-RVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 89 F-----KSTYEDETAVHVVMELCEGGDL---FDRIIAKGYNSERDAATVLRAIVNAVNVC 140
S + E V +V E + DL D+ G +E ++R + ++
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAE-TIKDLMRQFLRGLDFL 128
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL-R 199
H+ ++HRDLKPEN S +K+ DFG A ++ +V + +Y APEVL +
Sbjct: 129 HANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQ 185
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKK----GTYDAI-LQGEIDFDTD------- 247
Y +D+WS G I + P F ++ +D I L E D+ D
Sbjct: 186 STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGA 245
Query: 248 -------PW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
P P + + L+ MLT +P +RI+A + L+H +L +
Sbjct: 246 FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 147 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 201
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 262 LAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 321 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K ++K P + RE+++ ++ G +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSK-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 100
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 101 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 158
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 159 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 213
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 214 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 273
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 274 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 332
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 333 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 362
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 85 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCAKLTDDHVQFLIYQILRGLKYIHSADI 142
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 143 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 197
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 257
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 258 LAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 316
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 317 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 346
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 85 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 142
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 143 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMA--GFVATRWYRAPEIMLNWMHYN 197
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 257
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 258 LAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 316
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 317 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 346
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 111/264 (42%), Gaps = 27/264 (10%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACK---SIAKKPKMRLAENDMIRR--EIQIRLYLSGQPN 85
LG G +G + R YA K S + PK D R+ E+ + P
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPK------DRARKLAEVGSHEKVGQHPC 118
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSMG 144
V + +E+ +++ ELC G L A G + E LR + A+ HS G
Sbjct: 119 CVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG 177
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG--FYIAPEVLRRRY 202
++H D+KP N R K+ DFG LL E G V G Y+APE+L+ Y
Sbjct: 178 LVHLDVKPANIFLGPRGR---CKLGDFG--LLVELGTAGAGEVQEGDPRYMAPELLQGSY 232
Query: 203 GKEIDIWSAGV-ILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
G D++S G+ IL + + P E + L E +SS + ++
Sbjct: 233 GTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTA------GLSSELRSVLV 286
Query: 262 RMLTKDPKRRITAAQVLEHPWLRE 285
ML DPK R TA +L P LR+
Sbjct: 287 MMLEPDPKLRATAEALLALPVLRQ 310
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKXQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 147 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 201
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 262 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 321 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 36/202 (17%)
Query: 122 SERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181
SE ++ ++ + HS GV+HRDLKP N ++ +++ LK+ DFG A +
Sbjct: 124 SEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGN---LAVNEDCELKILDFGLARHADAEM 180
Query: 182 VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ 239
V + +Y APEV+ Y + +DIWS G I+ +L+G F + IL+
Sbjct: 181 T--GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILK 238
Query: 240 ----------------------------GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRR 271
DF T +P S A DL+ +ML D +R
Sbjct: 239 VTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKR 297
Query: 272 ITAAQVLEHPWLRESGEASDDT 293
+TAAQ L HP+ + ++T
Sbjct: 298 LTAAQALTHPFFEPFRDPEEET 319
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 98
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 99 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 156
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 157 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 211
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 212 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 271
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 272 LAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 330
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 331 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 360
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 16/214 (7%)
Query: 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR 77
++ V Y +++G+G FG ++ ++ A K + + + + EI+I
Sbjct: 92 HDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE----EIRIL 147
Query: 78 LYLSGQP-----NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVL 130
+L Q NV+ + + + EL +L++ I + S
Sbjct: 148 EHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFA 206
Query: 131 RAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG 190
+I+ ++ H ++H DLKPEN + + + +KV DFGS+ +E +VY I S
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPENI-LLKQQGRSGIKVIDFGSSC-YEHQRVYXXIQ-SR 263
Query: 191 FYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVP 223
FY APEV L RYG ID+WS G IL LL+G P
Sbjct: 264 FYRAPEVILGARYGMPIDMWSLGCILAELLTGYP 297
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 258 DLVRRMLTKDPKRRITAAQVLEHPWLR 284
D +++ L DP R+T Q L HPWLR
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 108
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 109 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 166
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 167 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 221
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 222 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 281
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 282 LAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 340
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 341 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 370
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 119/275 (43%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ A +++ + + G NV + + E+ V++VMEL +
Sbjct: 58 SRPFQNQTHAKR-----AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD 112
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I + LK
Sbjct: 113 AN--LSQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDCTLK 166
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFW 226
+ DFG A + V + +Y APEV L Y + +DIWS G I+ ++ G F
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP 226
Query: 227 AETKKGTYDAILQ----GEIDFDTDPWPSI------------------------------ 252
++ +++ +F P++
Sbjct: 227 GTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH 286
Query: 253 ----SSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+S A+DL+ +ML D +RI+ + L+HP++
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 107
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 108 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 165
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 166 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 220
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 221 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 280
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 281 LAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 339
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 340 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 369
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 36/202 (17%)
Query: 122 SERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181
SE ++ ++ + HS GV+HRDLKP N ++ +++ LK+ DFG A +
Sbjct: 142 SEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGN---LAVNEDCELKILDFGLARHADAEM 198
Query: 182 VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ 239
V + +Y APEV+ Y + +DIWS G I+ +L+G F + IL+
Sbjct: 199 T--GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILK 256
Query: 240 ----------------------------GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRR 271
DF T +P S A DL+ +ML D +R
Sbjct: 257 VTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKR 315
Query: 272 ITAAQVLEHPWLRESGEASDDT 293
+TAAQ L HP+ + ++T
Sbjct: 316 LTAAQALTHPFFEPFRDPEEET 337
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKXQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 147 IHRDLKPSNLAV---NEDXELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 201
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 262 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 321 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 16/214 (7%)
Query: 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR 77
++ V Y +++G+G FG ++ ++ A K + + + + EI+I
Sbjct: 92 HDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE----EIRIL 147
Query: 78 LYLSGQP-----NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVL 130
+L Q NV+ + + + EL +L++ I + S
Sbjct: 148 EHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFA 206
Query: 131 RAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG 190
+I+ ++ H ++H DLKPEN + + + +KV DFGS+ +E +VY I S
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPENI-LLKQQGRSGIKVIDFGSSC-YEHQRVYTXIQ-SR 263
Query: 191 FYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVP 223
FY APEV L RYG ID+WS G IL LL+G P
Sbjct: 264 FYRAPEVILGARYGMPIDMWSLGCILAELLTGYP 297
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 258 DLVRRMLTKDPKRRITAAQVLEHPWLR 284
D +++ L DP R+T Q L HPWLR
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 143/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 91 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 148
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + ++++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 149 IHRDLKPSNLAV---NEDSELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 203
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 204 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 263
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 264 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 322
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 323 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 352
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 143/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 95 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 152
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + ++++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 153 IHRDLKPSNLAV---NEDSELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 207
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 208 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 267
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 268 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 326
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 327 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 356
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 108
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 109 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 166
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 167 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMX--GXVATRWYRAPEIMLNWMHYN 221
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 222 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 281
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 282 LAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 340
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 341 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 370
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 147 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 201
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 262 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 321 DPTDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 16/214 (7%)
Query: 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR 77
++ V Y +++G+G FG ++ ++ A K + + + + EI+I
Sbjct: 92 HDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE----EIRIL 147
Query: 78 LYLSGQP-----NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVL 130
+L Q NV+ + + + EL +L++ I + S
Sbjct: 148 EHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFA 206
Query: 131 RAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG 190
+I+ ++ H ++H DLKPEN + + + +KV DFGS+ +E +VY I S
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPENI-LLKQQGRSGIKVIDFGSSC-YEHQRVYTXIQ-SR 263
Query: 191 FYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVP 223
FY APEV L RYG ID+WS G IL LL+G P
Sbjct: 264 FYRAPEVILGARYGMPIDMWSLGCILAELLTGYP 297
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 258 DLVRRMLTKDPKRRITAAQVLEHPWLR 284
D +++ L DP R+T Q L HPWLR
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 85 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 142
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 143 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 197
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 257
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 258 LAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 316
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 317 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 346
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 123/292 (42%), Gaps = 43/292 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM---IRREIQI--RLYLSGQPN 85
+G G +G Y + + A KS+ + P + RE+ + RL PN
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSV-RVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 86 VVEF-----KSTYEDETAVHVVMELCEGGDL---FDRIIAKGYNSERDAATVLRAIVNAV 137
VV S + E V +V E + DL D+ G +E ++R + +
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAE-TIKDLMRQFLRGL 133
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV 197
+ H+ ++HRDLKPEN S +K+ DFG A ++ +V + +Y APEV
Sbjct: 134 DFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEV 190
Query: 198 L-RRRYGKEIDIWSAGVILYILLSGVPPFWAETKK----GTYDAI-LQGEIDFDTD---- 247
L + Y +D+WS G I + P F ++ +D I L E D+ D
Sbjct: 191 LLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP 250
Query: 248 ----------PW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
P P + + L+ MLT +P +RI+A + L+H +L +
Sbjct: 251 RGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 302
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 147 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNAMHYN 201
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 262 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 321 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 95 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 152
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 153 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 207
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 208 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 267
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 268 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 326
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 327 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 356
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 95 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 152
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 153 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 207
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 208 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 267
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 268 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 326
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 327 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 356
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 91 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 148
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 149 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 203
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 204 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 263
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 264 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 322
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 323 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 352
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 147 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 201
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 262 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 321 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 91 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 148
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 149 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 203
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 204 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 263
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 264 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 322
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 323 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 352
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 96 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 153
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 154 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 208
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 268
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 269 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 327
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 328 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 357
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 99
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 100 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 157
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 158 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 212
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 213 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 272
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 273 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 331
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 332 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 361
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 147 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 201
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 262 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 321 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 100
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 101 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 158
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 159 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 213
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 214 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 273
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 274 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 332
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 333 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 362
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 100
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 101 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 158
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 159 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 213
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 214 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 273
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 274 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 332
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 333 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 362
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 94 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 151
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 152 IHRDLKPSNLAV---NEDXELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 206
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 207 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 266
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 267 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 325
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 326 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 355
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 94 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 151
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 152 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 206
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 207 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 266
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 267 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 325
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 326 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 355
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 111
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 112 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 169
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 170 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEM--XGYVATRWYRAPEIMLNWMHYN 224
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 225 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 284
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 285 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 343
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 344 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 373
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 87
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 88 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 145
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 146 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 200
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 201 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 260
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 261 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 319
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 320 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 349
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 119/275 (43%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ A +++ + + G NV + + E+ V++VMEL +
Sbjct: 58 SRPFQNQTHAKR-----AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD 112
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I + LK
Sbjct: 113 AN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDCTLK 166
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFW 226
+ DFG A + V + +Y APEV L Y + +DIWS G I+ ++ G F
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP 226
Query: 227 AETKKGTYDAILQ----GEIDFDTDPWPSI------------------------------ 252
++ +++ +F P++
Sbjct: 227 GTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH 286
Query: 253 ----SSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+S A+DL+ +ML D +RI+ + L+HP++
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 111
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 112 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 169
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 170 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 224
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 225 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 284
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 285 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 343
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 344 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 373
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 99
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 100 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 157
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 158 IHRDLKPSNLAV---NEDXELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 212
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 213 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 272
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 273 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 331
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 332 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 361
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 107
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 108 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 165
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 166 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 220
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 221 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 280
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 281 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 339
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 340 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 369
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 94 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 151
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 152 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 206
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 207 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 266
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 267 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 325
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 326 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 355
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 108
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 109 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 166
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 167 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 221
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 222 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 281
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 282 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 340
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 341 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 370
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 94 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 151
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 152 IHRDLKPSNLAV---NEDXELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 206
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 207 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 266
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 267 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 325
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 326 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 355
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 147 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 201
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 262 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 321 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 91 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 148
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 149 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 203
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 204 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 263
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 264 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 322
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 323 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 352
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 119/302 (39%), Gaps = 46/302 (15%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV T + A K I + + RE++I + N++ K
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV-VTNAKRTLRELKILKHFKHD-NIIAIK 119
Query: 91 S------TYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
Y + +V+VV++L E DL I + + L ++ + HS
Sbjct: 120 DILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ 178
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFGSALLF-----EEGQVYRDIVGSGFYIAPEVL- 198
V+HRDLKP N ++N LK+ DFG A E + V + +Y APE++
Sbjct: 179 VIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML 235
Query: 199 -RRRYGKEIDIWSAGVI---------------------LYILLSGVPPFWAETKKGT--Y 234
Y + ID+WS G I L +++ G P G
Sbjct: 236 SLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERV 295
Query: 235 DAILQGEIDFDTDPW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEAS 290
A +Q PW P A L+ RML +P RI+AA L HP+L + +
Sbjct: 296 RAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPD 355
Query: 291 DD 292
D+
Sbjct: 356 DE 357
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 147 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GXVATRWYRAPEIMLNWMHYN 201
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 262 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 321 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 112/262 (42%), Gaps = 23/262 (8%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ---PNV 86
++G G+FG + + +C +I ++ + RRE + GQ PN+
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKT---LKGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 87 VEFKSTYEDETAVHVVMELCEGG--DLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
+ + + V ++ E E G D F R+ G + +LR I + + M
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFLRL-NDGQFTVIQLVGMLRGIASGMRYLAEMS 136
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ---VYRDIVGSGF---YIAPEVL 198
+HRDL N I + N + KV+DFG + EE Y +G + APE +
Sbjct: 137 YVHRDLAARN---ILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAI 193
Query: 199 R-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256
R++ D WS G++++ ++S G P+W + + +AI Q D+ P P ++
Sbjct: 194 AFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ---DYRLPPPPDCPTSL 250
Query: 257 KDLVRRMLTKDPKRRITAAQVL 278
L+ KD R QV+
Sbjct: 251 HQLMLDCWQKDRNARPRFPQVV 272
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 85
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 86 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 143
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 144 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 198
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 199 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 258
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 259 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 317
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 318 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 347
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 147 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 201
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 262 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 321 DPFDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 85
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 86 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 143
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 144 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 198
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 199 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 258
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 259 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 317
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 318 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 347
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 140/330 (42%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 96 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 153
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG L V + +Y APE++ Y
Sbjct: 154 IHRDLKPSNLAV---NEDCELKILDFG--LARHTADEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 268
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 269 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 327
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 328 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 357
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 117/276 (42%), Gaps = 34/276 (12%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89
++G G +G Y T + A K + + E + I++EI + S N+ +
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVM----DVTGDEEEEIKQEINMLKKYSHHRNIATY 86
Query: 90 KSTYEDETA------VHVVMELCEGGDLFDRIIAKGYNS--ERDAATVLRAIVNAVNVCH 141
+ + + +VME C G + D I N+ E A + R I+ ++ H
Sbjct: 87 YGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH 146
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD-IVGSGFYIAPEVLR- 199
V+HRD+K +N +NA +K+ DFG + + R+ +G+ +++APEV+
Sbjct: 147 QHKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIAC 203
Query: 200 -----RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254
Y + D+WS G+ + G PP ++ +P P + S
Sbjct: 204 DENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP-------MRALFLIPRNPAPRLKS 256
Query: 255 TA-----KDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ + L K+ +R Q+++HP++R+
Sbjct: 257 KKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRD 292
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 85 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 142
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 143 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 197
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 257
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 258 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 316
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 317 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 346
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 86
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 87 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 144
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 145 IHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 199
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 200 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 259
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 260 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 318
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 319 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 348
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 130/302 (43%), Gaps = 57/302 (18%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAK--KPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
LG G GV + + + A K I KP +R + I RE+Q+ L+ P +V
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR----NQIIRELQV-LHECNSPYIVG 95
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCH-SMGVM 146
F + + + + ME +GG L D+++ K G E+ V A++ + +M
Sbjct: 96 FYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIM 154
Query: 147 HRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGK 204
HRD+KP N SR + +K+ DFG S L + + VG+ Y++PE L+ Y
Sbjct: 155 HRDVKPSNILVNSRGE---IKLCDFGVSGQLID--SMANSFVGTRSYMSPERLQGTHYSV 209
Query: 205 EIDIWSAGVILYILLSG---VPPFWAETKKGTYDAILQGE-------------------- 241
+ DIWS G+ L + G +PP A+ + + ++G+
Sbjct: 210 QSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGM 269
Query: 242 -----------IDFDT-DPWPSISSTA-----KDLVRRMLTKDPKRRITAAQVLEHPWLR 284
+D+ +P P + S +D V + L K+P R Q++ H +++
Sbjct: 270 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 329
Query: 285 ES 286
S
Sbjct: 330 RS 331
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 34/211 (16%)
Query: 29 RMLGRGQFG-VSYLC---TENSTNRPYACKSIAKK--PKMRLAENDMIRREIQIRLYLSG 82
R LG G FG VS C T + T A K++ + P++R +REI+I L
Sbjct: 14 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSG----WQREIEILRTLYH 69
Query: 83 QPNVVEFKSTYED--ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC 140
+ ++V++K ED E +V +VME G L D + R + + ++ A +C
Sbjct: 70 E-HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-------PRHCVGLAQLLLFAQQIC 121
Query: 141 ------HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG---- 190
H+ +HR L N + D++ L+K+ DFG A EG Y + G
Sbjct: 122 EGMAYLHAQHYIHRALAARN---VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 178
Query: 191 FYIAPEVLRR-RYGKEIDIWSAGVILYILLS 220
F+ APE L+ ++ D+WS GV LY LL+
Sbjct: 179 FWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 34/211 (16%)
Query: 29 RMLGRGQFG-VSYLC---TENSTNRPYACKSIAKK--PKMRLAENDMIRREIQIRLYLSG 82
R LG G FG VS C T + T A K++ + P++R +REI+I L
Sbjct: 15 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSG----WQREIEILRTLYH 70
Query: 83 QPNVVEFKSTYED--ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC 140
+ ++V++K ED E +V +VME G L D + R + + ++ A +C
Sbjct: 71 E-HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-------PRHCVGLAQLLLFAQQIC 122
Query: 141 ------HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG---- 190
H+ +HR L N + D++ L+K+ DFG A EG Y + G
Sbjct: 123 EGMAYLHAQHYIHRALAARN---VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 179
Query: 191 FYIAPEVLRR-RYGKEIDIWSAGVILYILLS 220
F+ APE L+ ++ D+WS GV LY LL+
Sbjct: 180 FWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 130/302 (43%), Gaps = 57/302 (18%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAK--KPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
LG G GV + + + A K I KP +R + I RE+Q+ L+ P +V
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR----NQIIRELQV-LHECNSPYIVG 130
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCH-SMGVM 146
F + + + + ME +GG L D+++ K G E+ V A++ + +M
Sbjct: 131 FYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIM 189
Query: 147 HRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGK 204
HRD+KP N SR + +K+ DFG S L + + VG+ Y++PE L+ Y
Sbjct: 190 HRDVKPSNILVNSRGE---IKLCDFGVSGQLID--SMANSFVGTRSYMSPERLQGTHYSV 244
Query: 205 EIDIWSAGVILYILLSG---VPPFWAETKKGTYDAILQGE-------------------- 241
+ DIWS G+ L + G +PP A+ + + ++G+
Sbjct: 245 QSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGM 304
Query: 242 -----------IDFDTD-PWPSISSTA-----KDLVRRMLTKDPKRRITAAQVLEHPWLR 284
+D+ + P P + S +D V + L K+P R Q++ H +++
Sbjct: 305 DSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 364
Query: 285 ES 286
S
Sbjct: 365 RS 366
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 119/275 (43%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ A +++ + + G NV + + E+ V++VMEL +
Sbjct: 58 SRPFQNQTHAKR-----AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD 112
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I + LK
Sbjct: 113 AN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDCTLK 166
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFW 226
+ DFG A + V + +Y APEV L Y + +DIWS G I+ ++ G F
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP 226
Query: 227 AETKKGTYDAILQG-------------------------------EIDFDTDPWPSIS-- 253
++ +++ E F +P+ S
Sbjct: 227 GTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH 286
Query: 254 -----STAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
S A+DL+ +ML D +RI+ + L+HP++
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 122/313 (38%), Gaps = 46/313 (14%)
Query: 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLY 79
DV Y +G G +GV T + A K I + + RE++I +
Sbjct: 52 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV-VTNAKRTLRELKILKH 110
Query: 80 LSGQPNVVEFKS------TYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAI 133
N++ K Y + +V+VV++L E DL I + + L +
Sbjct: 111 FKHD-NIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQL 168
Query: 134 VNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF-----EEGQVYRDIVG 188
+ + HS V+HRDLKP N ++N LK+ DFG A E + V
Sbjct: 169 LRGLKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 225
Query: 189 SGFYIAPEVL--RRRYGKEIDIWSAGVI---------------------LYILLSGVPPF 225
+ +Y APE++ Y + ID+WS G I L +++ G P
Sbjct: 226 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSP 285
Query: 226 WAETKKGT--YDAILQGEIDFDTDPW----PSISSTAKDLVRRMLTKDPKRRITAAQVLE 279
G A +Q PW P A L+ RML +P RI+AA L
Sbjct: 286 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 345
Query: 280 HPWLRESGEASDD 292
HP+L + + D+
Sbjct: 346 HPFLAKYHDPDDE 358
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 119/275 (43%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ A +++ + + G NV + + E+ V++VMEL +
Sbjct: 59 SRPFQNQTHAKR-----AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD 113
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I + LK
Sbjct: 114 AN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDCTLK 167
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFW 226
+ DFG A + V + +Y APEV L Y + +DIWS G I+ ++ G F
Sbjct: 168 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP 227
Query: 227 AETKKGTYDAILQG-------------------------------EIDFDTDPWPSIS-- 253
++ +++ E F +P+ S
Sbjct: 228 GTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH 287
Query: 254 -----STAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
S A+DL+ +ML D +RI+ + L+HP++
Sbjct: 288 NKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 322
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 128/297 (43%), Gaps = 44/297 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +G + + A K +++ P + RE+++ ++ + NV+
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE-NVIGLL 116
Query: 91 STYEDETA------VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
+ T+ V++V L G DL + I+ ++ ++ I+ + HS
Sbjct: 117 DVFTPATSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 174
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RY 202
++HRDLKP N + +++ LK+ DFG A ++ V + +Y APE++ Y
Sbjct: 175 IIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHY 229
Query: 203 GKEIDIWSAGVILYILLSG---------------------VPPFWAETKKGTYDA----- 236
+DIWS G I+ LL+G PP ++ +++A
Sbjct: 230 NMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEARNYIN 289
Query: 237 -ILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
+ Q D + + A DL+ +ML D +RITA++ L HP+ + + D+
Sbjct: 290 SLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQYHDPDDE 346
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 105/241 (43%), Gaps = 45/241 (18%)
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
G NV + + E+ V++VMEL + ++I + ER + +L ++ + H
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHER-MSYLLYQMLCGIKHLH 143
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRR 200
S G++HRDLKP N I + LK+ DFG A + V + +Y APEV L
Sbjct: 144 SAGIIHRDLKPSN---IVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGM 200
Query: 201 RYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETKKGTYDAI 237
Y + +DIWS G I+ IL G P F + + + +
Sbjct: 201 GYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYV 260
Query: 238 -------------LQGEIDFDTDPWPS--ISSTAKDLVRRMLTKDPKRRITAAQVLEHPW 282
L ++ F D + +S A+DL+ +ML D +RI+ + L+HP+
Sbjct: 261 ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320
Query: 283 L 283
+
Sbjct: 321 I 321
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 119/275 (43%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ A +++ + + G NV + + E+ V++VMEL +
Sbjct: 60 SRPFQNQTHAKR-----AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD 114
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I + LK
Sbjct: 115 AN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDCTLK 168
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFW 226
+ DFG A + V + +Y APEV L Y + +DIWS G I+ ++ G F
Sbjct: 169 ILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP 228
Query: 227 AETKKGTYDAILQG-------------------------------EIDFDTDPWPSIS-- 253
++ +++ E F +P+ S
Sbjct: 229 GTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH 288
Query: 254 -----STAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
S A+DL+ +ML D +RI+ + L+HP++
Sbjct: 289 NKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 323
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 27/211 (12%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA---ENDMIR--REIQIRLYLSG 82
G+ +G G FG Y + A P+ A E ++R R + I L++
Sbjct: 17 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 75
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSE-RDAATVLRAIVNAVNVCH 141
Y + + +V + CEG L+ + A E + + R ++ H
Sbjct: 76 ----------YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH 125
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL---FEEGQVYRDIVGSGFYIAPEVL 198
+ ++HRDLK N F+ D+ +K+ DFG A + + + + GS ++APEV+
Sbjct: 126 AKSIIHRDLKSNNI-FLHEDNT--VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 182
Query: 199 RRR----YGKEIDIWSAGVILYILLSGVPPF 225
R + Y + D+++ G++LY L++G P+
Sbjct: 183 RMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 213
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 130/302 (43%), Gaps = 57/302 (18%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAK--KPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
LG G GV + + + A K I KP +R + I RE+Q+ L+ P +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR----NQIIRELQV-LHECNSPYIVG 68
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCH-SMGVM 146
F + + + + ME +GG L D+++ K G E+ V A++ + +M
Sbjct: 69 FYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIM 127
Query: 147 HRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGK 204
HRD+KP N SR + +K+ DFG S L + + VG+ Y++PE L+ Y
Sbjct: 128 HRDVKPSNILVNSRGE---IKLCDFGVSGQLID--SMANSFVGTRSYMSPERLQGTHYSV 182
Query: 205 EIDIWSAGVILYILLSG---VPPFWAETKKGTYDAILQGE-------------------- 241
+ DIWS G+ L + G +PP A+ + + ++G+
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGM 242
Query: 242 -----------IDFDTD-PWPSISSTA-----KDLVRRMLTKDPKRRITAAQVLEHPWLR 284
+D+ + P P + S +D V + L K+P R Q++ H +++
Sbjct: 243 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302
Query: 285 ES 286
S
Sbjct: 303 RS 304
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 130/302 (43%), Gaps = 57/302 (18%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAK--KPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
LG G GV + + + A K I KP +R + I RE+Q+ L+ P +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR----NQIIRELQV-LHECNSPYIVG 68
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCH-SMGVM 146
F + + + + ME +GG L D+++ K G E+ V A++ + +M
Sbjct: 69 FYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIM 127
Query: 147 HRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGK 204
HRD+KP N SR + +K+ DFG S L + + VG+ Y++PE L+ Y
Sbjct: 128 HRDVKPSNILVNSRGE---IKLCDFGVSGQLID--SMANSFVGTRSYMSPERLQGTHYSV 182
Query: 205 EIDIWSAGVILYILLSG---VPPFWAETKKGTYDAILQGE-------------------- 241
+ DIWS G+ L + G +PP A+ + + ++G+
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGM 242
Query: 242 -----------IDFDTD-PWPSISSTA-----KDLVRRMLTKDPKRRITAAQVLEHPWLR 284
+D+ + P P + S +D V + L K+P R Q++ H +++
Sbjct: 243 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302
Query: 285 ES 286
S
Sbjct: 303 RS 304
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 128/297 (43%), Gaps = 44/297 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKSQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + ++++ LK+ DFG L V + +Y APE++ Y
Sbjct: 147 IHRDLKPSNLAV---NEDSELKILDFG--LCRHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 262 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ D+G A ++ V + +Y APE++ Y
Sbjct: 147 IHRDLKPSNLAV---NEDCELKILDYGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 201
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 262 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 321 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 130/302 (43%), Gaps = 57/302 (18%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAK--KPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
LG G GV + + + A K I KP +R + I RE+Q+ L+ P +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR----NQIIRELQV-LHECNSPYIVG 68
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCH-SMGVM 146
F + + + + ME +GG L D+++ K G E+ V A++ + +M
Sbjct: 69 FYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIM 127
Query: 147 HRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGK 204
HRD+KP N SR + +K+ DFG S L + + VG+ Y++PE L+ Y
Sbjct: 128 HRDVKPSNILVNSRGE---IKLCDFGVSGQLID--SMANSFVGTRSYMSPERLQGTHYSV 182
Query: 205 EIDIWSAGVILYILLSG---VPPFWAETKKGTYDAILQGE-------------------- 241
+ DIWS G+ L + G +PP A+ + + ++G+
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGM 242
Query: 242 -----------IDFDTD-PWPSISSTA-----KDLVRRMLTKDPKRRITAAQVLEHPWLR 284
+D+ + P P + S +D V + L K+P R Q++ H +++
Sbjct: 243 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302
Query: 285 ES 286
S
Sbjct: 303 RS 304
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 130/302 (43%), Gaps = 57/302 (18%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAK--KPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
LG G GV + + + A K I KP +R + I RE+Q+ L+ P +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR----NQIIRELQV-LHECNSPYIVG 68
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCH-SMGVM 146
F + + + + ME +GG L D+++ K G E+ V A++ + +M
Sbjct: 69 FYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIM 127
Query: 147 HRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGK 204
HRD+KP N SR + +K+ DFG S L + + VG+ Y++PE L+ Y
Sbjct: 128 HRDVKPSNILVNSRGE---IKLCDFGVSGQLID--SMANSFVGTRSYMSPERLQGTHYSV 182
Query: 205 EIDIWSAGVILYILLSG---VPPFWAETKKGTYDAILQGE-------------------- 241
+ DIWS G+ L + G +PP A+ + + ++G+
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGM 242
Query: 242 -----------IDFDTD-PWPSISSTA-----KDLVRRMLTKDPKRRITAAQVLEHPWLR 284
+D+ + P P + S +D V + L K+P R Q++ H +++
Sbjct: 243 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302
Query: 285 ES 286
S
Sbjct: 303 RS 304
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 51/254 (20%)
Query: 80 LSGQPNVVEFKSTYEDETA--VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L G PN+V+ D+ + ++ E D +++ ++ D + ++ A+
Sbjct: 83 LCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPTL-TDYDIRYYIYELLKAL 139
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNAL--LKVTDFGSALLFEEGQVYRDIVGSGFYIAP 195
+ CHS G+MHRD+KP N D+ L L++ D+G A + G+ Y V S ++ P
Sbjct: 140 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 195
Query: 196 EVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD------ 247
E+L + Y +D+WS G + ++ PF+ +D +++ TD
Sbjct: 196 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF--YGHDNHDQLVKIAKVLGTDGLNVYL 253
Query: 248 ---------------------PWPS---------ISSTAKDLVRRMLTKDPKRRITAAQV 277
PW +S A D + ++L D + R+TA +
Sbjct: 254 NKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEA 313
Query: 278 LEHPWLRESGEASD 291
+ HP+ ++ A +
Sbjct: 314 MTHPYFQQVRAAEN 327
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 51/254 (20%)
Query: 80 LSGQPNVVEFKSTYEDETA--VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L G PN+V+ D+ + ++ E D +++ ++ D + ++ A+
Sbjct: 82 LCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPTL-TDYDIRYYIYELLKAL 138
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNAL--LKVTDFGSALLFEEGQVYRDIVGSGFYIAP 195
+ CHS G+MHRD+KP N D+ L L++ D+G A + G+ Y V S ++ P
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 194
Query: 196 EVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD------ 247
E+L + Y +D+WS G + ++ PF+ +D +++ TD
Sbjct: 195 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF--YGHDNHDQLVKIAKVLGTDGLNVYL 252
Query: 248 ---------------------PWPS---------ISSTAKDLVRRMLTKDPKRRITAAQV 277
PW +S A D + ++L D + R+TA +
Sbjct: 253 NKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEA 312
Query: 278 LEHPWLRESGEASD 291
+ HP+ ++ A +
Sbjct: 313 MTHPYFQQVRAAEN 326
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 51/254 (20%)
Query: 80 LSGQPNVVEFKSTYEDETA--VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L G PN+V+ D+ + ++ E D +++ ++ D + ++ A+
Sbjct: 83 LXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPTL-TDYDIRYYIYELLKAL 139
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNAL--LKVTDFGSALLFEEGQVYRDIVGSGFYIAP 195
+ CHS G+MHRD+KP N D+ L L++ D+G A + G+ Y V S ++ P
Sbjct: 140 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 195
Query: 196 EVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD------ 247
E+L + Y +D+WS G + ++ PF+ +D +++ TD
Sbjct: 196 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF--YGHDNHDQLVKIAKVLGTDGLNVYL 253
Query: 248 ---------------------PWPS---------ISSTAKDLVRRMLTKDPKRRITAAQV 277
PW +S A D + ++L D + R+TA +
Sbjct: 254 NKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEA 313
Query: 278 LEHPWLRESGEASD 291
+ HP+ ++ A +
Sbjct: 314 MTHPYFQQVRAAEN 327
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 127/297 (42%), Gaps = 44/297 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 96 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 153
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG L V + +Y APE++ Y
Sbjct: 154 IHRDLKPSNLAV---NEDCELKILDFG--LARHTADEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 268
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 269 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 324
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 51/254 (20%)
Query: 80 LSGQPNVVEFKSTYEDETA--VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L G PN+V+ D+ + ++ E D +++ ++ D + ++ A+
Sbjct: 84 LCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPTL-TDYDIRYYIYELLKAL 140
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNAL--LKVTDFGSALLFEEGQVYRDIVGSGFYIAP 195
+ CHS G+MHRD+KP N D+ L L++ D+G A + G+ Y V S ++ P
Sbjct: 141 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 196
Query: 196 EVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD------ 247
E+L + Y +D+WS G + ++ PF+ +D +++ TD
Sbjct: 197 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF--YGHDNHDQLVKIAKVLGTDGLNVYL 254
Query: 248 ---------------------PWPS---------ISSTAKDLVRRMLTKDPKRRITAAQV 277
PW +S A D + ++L D + R+TA +
Sbjct: 255 NKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEA 314
Query: 278 LEHPWLRESGEASD 291
+ HP+ ++ A +
Sbjct: 315 MTHPYFQQVRAAEN 328
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 95/221 (42%), Gaps = 20/221 (9%)
Query: 71 RREIQIRLYLSGQ---PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERD 125
RR+ + GQ PNV+ + T V ++ E E G L D + + G +
Sbjct: 78 RRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQ 136
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ---V 182
+LR I + M +HRDL N I + N + KV+DFG + E+
Sbjct: 137 LVGMLRGIAAGMKYLADMNYVHRDLAARN---ILVNSNLVCKVSDFGLSRFLEDDTSDPT 193
Query: 183 YRDIVGSGF---YIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAI 237
Y +G + APE ++ R++ D+WS G++++ ++S G P+W T + +AI
Sbjct: 194 YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI 253
Query: 238 LQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVL 278
Q D+ P S L+ KD R Q++
Sbjct: 254 EQ---DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIV 291
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 51/254 (20%)
Query: 80 LSGQPNVVEFKSTYEDETA--VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L G PN+V+ D+ + ++ E D +++ ++ D + ++ A+
Sbjct: 82 LXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPTL-TDYDIRYYIYELLKAL 138
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNAL--LKVTDFGSALLFEEGQVYRDIVGSGFYIAP 195
+ CHS G+MHRD+KP N D+ L L++ D+G A + G+ Y V S ++ P
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 194
Query: 196 EVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD------ 247
E+L + Y +D+WS G + ++ PF+ +D +++ TD
Sbjct: 195 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF--YGHDNHDQLVKIAKVLGTDGLNVYL 252
Query: 248 ---------------------PWPS---------ISSTAKDLVRRMLTKDPKRRITAAQV 277
PW +S A D + ++L D + R+TA +
Sbjct: 253 NKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEA 312
Query: 278 LEHPWLRESGEASD 291
+ HP+ ++ A +
Sbjct: 313 MTHPYFQQVRAAEN 326
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 51/254 (20%)
Query: 80 LSGQPNVVEFKSTYEDETA--VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L G PN+V+ D+ + ++ E D +++ ++ D + ++ A+
Sbjct: 82 LXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPTL-TDYDIRYYIYELLKAL 138
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNAL--LKVTDFGSALLFEEGQVYRDIVGSGFYIAP 195
+ CHS G+MHRD+KP N D+ L L++ D+G A + G+ Y V S ++ P
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 194
Query: 196 EVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD------ 247
E+L + Y +D+WS G + ++ PF+ +D +++ TD
Sbjct: 195 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF--YGHDNHDQLVKIAKVLGTDGLNVYL 252
Query: 248 ---------------------PWPS---------ISSTAKDLVRRMLTKDPKRRITAAQV 277
PW +S A D + ++L D + R+TA +
Sbjct: 253 NKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEA 312
Query: 278 LEHPWLRESGEASD 291
+ HP+ ++ A +
Sbjct: 313 MTHPYFQQVRAAEN 326
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 51/254 (20%)
Query: 80 LSGQPNVVEFKSTYEDETA--VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L G PN+V+ D+ + ++ E D +++ ++ D + ++ A+
Sbjct: 82 LXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPTL-TDYDIRYYIYELLKAL 138
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNAL--LKVTDFGSALLFEEGQVYRDIVGSGFYIAP 195
+ CHS G+MHRD+KP N D+ L L++ D+G A + G+ Y V S ++ P
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 194
Query: 196 EVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD------ 247
E+L + Y +D+WS G + ++ PF+ +D +++ TD
Sbjct: 195 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF--YGHDNHDQLVKIAKVLGTDGLNVYL 252
Query: 248 ---------------------PWPS---------ISSTAKDLVRRMLTKDPKRRITAAQV 277
PW +S A D + ++L D + R+TA +
Sbjct: 253 NKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEA 312
Query: 278 LEHPWLRESGEASD 291
+ HP+ ++ A +
Sbjct: 313 MTHPYFQQVRAAEN 326
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 70 IRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATV 129
+R+E ++ L PN++ + E + +VME GG L +R+++
Sbjct: 53 VRQEAKLFAMLK-HPNIIALRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDILVNW 110
Query: 130 LRAIVNAVNVCHS---MGVMHRDLKPENFSFISRDDNA-----LLKVTDFGSALLFEEGQ 181
I +N H + ++HRDLK N + + +N +LK+TDFG A +
Sbjct: 111 AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR-T 169
Query: 182 VYRDIVGSGFYIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPF 225
G+ ++APEV+R + K D+WS GV+L+ LL+G PF
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 127/297 (42%), Gaps = 44/297 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 96 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 153
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DFG L V + +Y APE++ Y
Sbjct: 154 IHRDLKPSNLAV---NEDCELKILDFG--LARHTADEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 268
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 269 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 324
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 119/275 (43%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ A +++ + + G NV + + E+ V++VMEL +
Sbjct: 58 SRPFQNQTHAKR-----AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD 112
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I + LK
Sbjct: 113 AN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDCTLK 166
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSG----- 221
+ DFG A + V + +Y APEV L Y + +DIWS G I+ ++ G
Sbjct: 167 ILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP 226
Query: 222 ------------------VPPFWAETKKGTYDAI-------------LQGEIDFDTDPWP 250
P F + + + L ++ F D
Sbjct: 227 GTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH 286
Query: 251 SI--SSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+ +S A+DL+ +ML D +RI+ + L+HP++
Sbjct: 287 NALKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 106/252 (42%), Gaps = 51/252 (20%)
Query: 80 LSGQPNVVEFKSTYEDETA--VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L G PN+V+ D+ + ++ E D +++ ++ D + ++ A+
Sbjct: 82 LCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPTL-TDYDIRYYIYELLKAL 138
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNAL--LKVTDFGSALLFEEGQVYRDIVGSGFYIAP 195
+ CHS G+MHRD+KP N D+ L L++ D+G A + G+ Y V S ++ P
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 194
Query: 196 EVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD------ 247
E+L + Y +D+WS G + ++ PF+ +D +++ TD
Sbjct: 195 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF--YGHDNHDQLVKIAKVLGTDGLNVYL 252
Query: 248 ---------------------PWPS---------ISSTAKDLVRRMLTKDPKRRITAAQV 277
PW +S A D + ++L D + R+TA +
Sbjct: 253 NKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEA 312
Query: 278 LEHPWLRESGEA 289
+ HP+ ++ A
Sbjct: 313 MTHPYFQQVRAA 324
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 93/206 (45%), Gaps = 19/206 (9%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRREIQIRLYLSGQPNV 86
G +G G FGV Y N+T A K +A + E +EI++ + N+
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTT--VAVKKLAAMVDITTEELKQQFDQEIKV-MAKCQHENL 92
Query: 87 VE---FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN---SERDAATVLRAIVNAVNVC 140
VE F S +D V+V M G L DR+ S + + N +N
Sbjct: 93 VELLGFSSDGDDLCLVYVYMP---NGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL 149
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL---FEEGQVYRDIVGSGFYIAPEV 197
H +HRD+K N I D+ K++DFG A F + + IVG+ Y+APE
Sbjct: 150 HENHHIHRDIKSAN---ILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEA 206
Query: 198 LRRRYGKEIDIWSAGVILYILLSGVP 223
LR + DI+S GV+L +++G+P
Sbjct: 207 LRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 93/206 (45%), Gaps = 19/206 (9%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRREIQIRLYLSGQPNV 86
G +G G FGV Y N+T A K +A + E +EI++ + N+
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTT--VAVKKLAAMVDITTEELKQQFDQEIKV-MAKCQHENL 92
Query: 87 VE---FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN---SERDAATVLRAIVNAVNVC 140
VE F S +D V+V M G L DR+ S + + N +N
Sbjct: 93 VELLGFSSDGDDLCLVYVYMP---NGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL 149
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL---FEEGQVYRDIVGSGFYIAPEV 197
H +HRD+K N I D+ K++DFG A F + + IVG+ Y+APE
Sbjct: 150 HENHHIHRDIKSAN---ILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEA 206
Query: 198 LRRRYGKEIDIWSAGVILYILLSGVP 223
LR + DI+S GV+L +++G+P
Sbjct: 207 LRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 51/254 (20%)
Query: 80 LSGQPNVVEFKSTYEDETA--VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L G PN+V+ D+ + ++ E D +++ ++ D + ++ A+
Sbjct: 82 LMGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPTL-TDYDIRYYIYELLKAL 138
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNAL--LKVTDFGSALLFEEGQVYRDIVGSGFYIAP 195
+ CHS G+MHRD+KP N D+ L L++ D+G A + G+ Y V S ++ P
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 194
Query: 196 EVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD------ 247
E+L + Y +D+WS G + ++ PF+ +D +++ TD
Sbjct: 195 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF--YGHDNHDQLVKIAKVLGTDGLNVYL 252
Query: 248 ---------------------PWPS---------ISSTAKDLVRRMLTKDPKRRITAAQV 277
PW +S A D + ++L D + R+TA +
Sbjct: 253 NKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEA 312
Query: 278 LEHPWLRESGEASD 291
+ HP+ ++ A +
Sbjct: 313 MTHPYFQQVRAAEN 326
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 51/254 (20%)
Query: 80 LSGQPNVVEFKSTYEDETA--VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L G PN+V+ D+ + ++ E D +++ ++ D + ++ A+
Sbjct: 103 LXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPTL-TDYDIRYYIYELLKAL 159
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNAL--LKVTDFGSALLFEEGQVYRDIVGSGFYIAP 195
+ CHS G+MHRD+KP N D+ L L++ D+G A + G+ Y V S ++ P
Sbjct: 160 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 215
Query: 196 EVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD------ 247
E+L + Y +D+WS G + ++ PF+ +D +++ TD
Sbjct: 216 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF--YGHDNHDQLVKIAKVLGTDGLNAYL 273
Query: 248 ---------------------PWPS---------ISSTAKDLVRRMLTKDPKRRITAAQV 277
PW +S A D + ++L D + R+TA +
Sbjct: 274 NKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEA 333
Query: 278 LEHPWLRESGEASD 291
+ HP+ ++ A +
Sbjct: 334 MTHPYFQQVRAAEN 347
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 141/330 (42%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ DF A ++ V + +Y APE++ Y
Sbjct: 147 IHRDLKPSNLAV---NEDCELKILDFYLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 201
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 262 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 321 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 19/254 (7%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LGRG FG + + T A K K+RL ++ R E + P +V
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVK------KVRL---EVFRVEELVACAGLSSPRIVPLY 130
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
+ V++ MEL EGG L I G E A L + + H+ ++H D+
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 190
Query: 151 KPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIV------GSGFYIAPE-VLRRRYG 203
K +N S D + + DFG AL + + + ++ G+ ++APE V+ +
Sbjct: 191 KADNVLLSS--DGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 248
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
++DIWS+ ++ +L+G P W + +G + E + PS + ++
Sbjct: 249 AKVDIWSSCCMMLHMLNGCHP-WTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEG 307
Query: 264 LTKDPKRRITAAQV 277
L K+P R +A ++
Sbjct: 308 LRKEPVHRASAMEL 321
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 27/211 (12%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA---ENDMIR--REIQIRLYLSG 82
G+ +G G FG Y + A P+ A E ++R R + I L++
Sbjct: 29 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 87
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSE-RDAATVLRAIVNAVNVCH 141
Y + + +V + CEG L+ + A E + + R ++ H
Sbjct: 88 ----------YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH 137
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL---LFEEGQVYRDIVGSGFYIAPEVL 198
+ ++HRDLK N F+ D+ +K+ DFG A + + + GS ++APEV+
Sbjct: 138 AKSIIHRDLKSNNI-FLHEDNT--VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194
Query: 199 RRR----YGKEIDIWSAGVILYILLSGVPPF 225
R + Y + D+++ G++LY L++G P+
Sbjct: 195 RMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 93/206 (45%), Gaps = 19/206 (9%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRREIQIRLYLSGQPNV 86
G +G G FGV Y N+T A K +A + E +EI++ + N+
Sbjct: 30 GNKMGEGGFGVVYKGYVNNTT--VAVKKLAAMVDITTEELKQQFDQEIKV-MAKCQHENL 86
Query: 87 VE---FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN---SERDAATVLRAIVNAVNVC 140
VE F S +D V+V M G L DR+ S + + N +N
Sbjct: 87 VELLGFSSDGDDLCLVYVYMP---NGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL 143
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL---FEEGQVYRDIVGSGFYIAPEV 197
H +HRD+K N I D+ K++DFG A F + + IVG+ Y+APE
Sbjct: 144 HENHHIHRDIKSAN---ILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEA 200
Query: 198 LRRRYGKEIDIWSAGVILYILLSGVP 223
LR + DI+S GV+L +++G+P
Sbjct: 201 LRGEITPKSDIYSFGVVLLEIITGLP 226
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 141/330 (42%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ FG A ++ V + +Y APE++ Y
Sbjct: 147 IHRDLKPSNLAV---NEDCELKILGFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 201
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 262 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 321 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 117/275 (42%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ L + + I G NV + + E+ V++VMEL +
Sbjct: 52 SRPFQNQTHAKRAYRELVLMKCVNHKNII-----GLLNVFTPQKSLEEFQDVYIVMELMD 106
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I + LK
Sbjct: 107 AN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDCTLK 160
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVIL------YILLS 220
+ DFG A + V + +Y APEV L Y + +D+WS G I+ IL
Sbjct: 161 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFP 220
Query: 221 G-----------------VPPFWAETKKGTYDAI-------------LQGEIDFDTDPWP 250
G P F + + + L ++ F D
Sbjct: 221 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH 280
Query: 251 S--ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+ +S A+DL+ +ML D +RI+ + L+HP++
Sbjct: 281 NKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 315
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 119/275 (43%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ A +++ + + G NV + + E+ V++VMEL +
Sbjct: 63 SRPFQNQTHAKR-----AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD 117
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I + LK
Sbjct: 118 AN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDCTLK 171
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVIL------YILLS 220
+ DFG A + V + +Y APEV L Y + +D+WS G I+ IL
Sbjct: 172 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFP 231
Query: 221 G-----------------VPPFWAETKKGTYDAI-------------LQGEIDFDTDPWP 250
G P F + + + L ++ F D
Sbjct: 232 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH 291
Query: 251 S--ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+ +S A+DL+ +ML D +RI+ + L+HP++
Sbjct: 292 NKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 326
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 121/281 (43%), Gaps = 49/281 (17%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSI-----AKKPKMRLAENDMIRREIQIRLYLSGQPN 85
+GRG +G + + A K I K+ K L + D++ R S P
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRS-------SDCPY 82
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN------SERDAATVLRAIVNAVN- 138
+V+F E + MEL FD+ Y+ E + A V A+N
Sbjct: 83 IVQFYGALFREGDCWICMELMSTS--FDKFYKYVYSVLDDVIPEEILGKITLATVKALNH 140
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEV 197
+ ++ ++HRD+KP N I D + +K+ DFG S L + RD G Y+APE
Sbjct: 141 LKENLKIIHRDIKPSN---ILLDRSGNIKLCDFGISGQLVDSIAKTRD-AGCRPYMAPER 196
Query: 198 L-----RRRYGKEIDIWSAGVILYILLSGVPPF--WAETKKGTYDAILQGEIDFDTDPWP 250
+ R+ Y D+WS G+ LY L +G P+ W +D + Q DP P
Sbjct: 197 IDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKW----NSVFDQLTQV---VKGDP-P 248
Query: 251 SISSTAK--------DLVRRMLTKDPKRRITAAQVLEHPWL 283
+S++ + + V LTKD +R ++L+HP++
Sbjct: 249 QLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA---ENDMIR--REIQIRLYLSG 82
G+ +G G FG Y + A P+ A E ++R R + I L++
Sbjct: 29 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 87
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSE-RDAATVLRAIVNAVNVCH 141
Y + +V + CEG L+ + A E + + R ++ H
Sbjct: 88 ----------YSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH 137
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL---LFEEGQVYRDIVGSGFYIAPEVL 198
+ ++HRDLK N F+ D+ +K+ DFG A + + + GS ++APEV+
Sbjct: 138 AKSIIHRDLKSNNI-FLHEDNT--VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194
Query: 199 RRR----YGKEIDIWSAGVILYILLSGVPPF 225
R + Y + D+++ G++LY L++G P+
Sbjct: 195 RMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 119/275 (43%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ A +++ + + G NV + + E+ V++VMEL +
Sbjct: 58 SRPFQNQTHAKR-----AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD 112
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I + LK
Sbjct: 113 AN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDCTLK 166
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVIL------YILLS 220
+ DFG A + V + +Y APEV L Y + +D+WS G I+ IL
Sbjct: 167 ILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFP 226
Query: 221 G-----------------VPPFWAETKKGTYDAI-------------LQGEIDFDTDPWP 250
G P F + + + L ++ F D
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH 286
Query: 251 S--ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+ +S A+DL+ +ML D +RI+ + L+HP++
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 141/330 (42%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ D G A ++ V + +Y APE++ Y
Sbjct: 147 IHRDLKPSNLAV---NEDCELKILDAGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 201
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 262 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 321 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 141/330 (42%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ D G A ++ V + +Y APE++ Y
Sbjct: 147 IHRDLKPSNLAV---NEDCELKILDGGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 201
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 262 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 321 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 23/262 (8%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ---PNV 86
++G G+FG + + +C +I ++ + RRE + GQ PN+
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKT---LKGGYTERQRREFLSEASIMGQFEHPNI 79
Query: 87 VEFKSTYEDETAVHVVMELCEGG--DLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
+ + + V ++ E E G D F R+ G + +LR I + + M
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGALDSFLRL-NDGQFTVIQLVGMLRGIASGMRYLAEMS 138
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ---VYRDIVGSGF---YIAPEVL 198
+HRDL N I + N + KV+DFG + EE +G + APE +
Sbjct: 139 YVHRDLAARN---ILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAI 195
Query: 199 R-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256
R++ D WS G++++ ++S G P+W + + +AI Q D+ P P ++
Sbjct: 196 AFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ---DYRLPPPPDCPTSL 252
Query: 257 KDLVRRMLTKDPKRRITAAQVL 278
L+ KD R QV+
Sbjct: 253 HQLMLDCWQKDRNARPRFPQVV 274
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 141/330 (42%), Gaps = 48/330 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + T A K +++ P + RE+++ ++ G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V + E+ V++V L G DL + I+ ++ ++ I+ + HS +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N + +++ LK+ D G A ++ V + +Y APE++ Y
Sbjct: 147 IHRDLKPSNLAV---NEDCELKILDRGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYN 201
Query: 204 KEIDIWSAGVILYILLSGVPPF---------------------------WAETKKGTYDA 236
+ +DIWS G I+ LL+G F +E+ + +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 237 ILQ-GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
+ Q +++F + + + A DL+ +ML D +RITAAQ L H + + + D+
Sbjct: 262 LTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
Query: 296 ILRMKQFRR----MNKLKKLTIKVIVEYLP 321
+ F +++ K LT ++ ++P
Sbjct: 321 DPYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 19/254 (7%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+GRG FG + + T A K K+RL ++ R E + P +V
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVK------KVRL---EVFRVEELVACAGLSSPRIVPLY 132
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
+ V++ MEL EGG L I G E A L + + H+ ++H D+
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 192
Query: 151 KPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIV------GSGFYIAPE-VLRRRYG 203
K +N S A L DFG AL + + + ++ G+ ++APE V+ +
Sbjct: 193 KADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 250
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
++DIWS+ ++ +L+G P W + +G + E + PS + ++
Sbjct: 251 AKVDIWSSCCMMLHMLNGCHP-WTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEG 309
Query: 264 LTKDPKRRITAAQV 277
L K+P R +A ++
Sbjct: 310 LRKEPVHRASAMEL 323
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 104/223 (46%), Gaps = 18/223 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ---PN 85
R++G G+FG +C+ ++A K +++ + RR+ + GQ PN
Sbjct: 49 RVIGAGEFG--EVCSGRLKLPGKRDVAVAIK-TLKVGYTEKQRRDFLCEASIMGQFDHPN 105
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSM 143
VV + V +V+E E G L D + K G + +LR I + M
Sbjct: 106 VVHLEGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADM 164
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG--QVYRDIVG--SGFYIAPEVLR 199
G +HRDL N I + N + KV+DFG + + E+ VY G + APE ++
Sbjct: 165 GYVHRDLAARN---ILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQ 221
Query: 200 -RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
R++ D+WS G++++ ++S G P+W + + AI +G
Sbjct: 222 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 264
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 48/233 (20%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQI------- 76
+Y ++GRG +G YL + +T + A K + + + L + I REI I
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFE-DLIDCKRILREITILNRLKSD 85
Query: 77 ---RLY-LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA 132
RLY L ++++F Y +V+E+ + DL + +E T+L
Sbjct: 86 YIIRLYDLIIPDDLLKFDELY-------IVLEIADS-DLKKLFKTPIFLTEEHIKTILYN 137
Query: 133 IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF--------------- 177
++ N H G++HRDLKP N +++D +KV DFG A
Sbjct: 138 LLLGENFIHESGIIHRDLKPAN-CLLNQD--CSVKVCDFGLARTINSEKDTNIVNDLEEN 194
Query: 178 -EEGQVYRDI-------VGSGFYIAPE--VLRRRYGKEIDIWSAGVILYILLS 220
E G +++ V + +Y APE +L+ Y K IDIWS G I LL+
Sbjct: 195 EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+PSIS +L+ ML +P +RIT Q L+HP+L++
Sbjct: 331 YPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKD 367
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 110/254 (43%), Gaps = 19/254 (7%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+GRG FG + + T A K K+RL ++ R E + P +V
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVK------KVRL---EVFRVEELVACAGLSSPRIVPLY 116
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
+ V++ MEL EGG L I G E A L + + H+ ++H D+
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 176
Query: 151 KPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIV------GSGFYIAPE-VLRRRYG 203
K +N S D + + DFG AL + + + ++ G+ ++APE V+ +
Sbjct: 177 KADNVLLSS--DGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 234
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
++DIWS+ ++ +L+G P W + +G + E + PS + ++
Sbjct: 235 AKVDIWSSCCMMLHMLNGCHP-WTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEG 293
Query: 264 LTKDPKRRITAAQV 277
L K+P R +A ++
Sbjct: 294 LRKEPVHRASAMEL 307
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 92/218 (42%), Gaps = 54/218 (24%)
Query: 128 TVLRAIVNAVNVCHSMGVMHRDLKPENFSFISR-DDNALLKVTDFGSALLFEEG-QVYRD 185
++L I++ ++ H+ V+HRDLKP N + + +K+ D G A LF + D
Sbjct: 132 SLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD 191
Query: 186 ---IVGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPF--------------- 225
+V + +Y APE+L R Y K IDIW+ G I LL+ P F
Sbjct: 192 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHH 251
Query: 226 -----------------WAETKKGTYDAILQGEIDFDTDPWPSIS-------------ST 255
W + KK + L DF + + + S S
Sbjct: 252 DQLDRIFNVMGFPADKDWEDIKKMPEHSTLMK--DFRRNTYTNCSLIKYMEKHKVKPDSK 309
Query: 256 AKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDT 293
A L++++LT DP +RIT+ Q ++ P+ E + D
Sbjct: 310 AFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSDV 347
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 34/211 (16%)
Query: 29 RMLGRGQFG-VSYLC---TENSTNRPYACKSIAK--KPKMRLAENDMIRREIQIRLYLSG 82
R LG G FG VS C T + T A K++ P+ R ++EI I L
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSG----WKQEIDILRTLYH 75
Query: 83 QPNVVEFKSTYED--ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC 140
+ +++++K ED E ++ +VME G L D + R + + + ++ A +C
Sbjct: 76 E-HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-------PRHSIGLAQLLLFAQQIC 127
Query: 141 ------HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG---- 190
HS +HR+L N + D++ L+K+ DFG A EG Y + G
Sbjct: 128 EGMAYLHSQHYIHRNLAARN---VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 184
Query: 191 FYIAPEVLRR-RYGKEIDIWSAGVILYILLS 220
F+ APE L+ ++ D+WS GV LY LL+
Sbjct: 185 FWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 120/284 (42%), Gaps = 27/284 (9%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LGRG +GV + + A K I + + E + ++ I + P V F
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRI--RATVNSQEQKRLLMDLDISMRTVDCPFTVTFY 72
Query: 91 STYEDETAVHVVMELCEGG--DLFDRIIAKGYNSERDA-ATVLRAIVNAVNVCHS-MGVM 146
E V + MEL + + ++I KG D + +IV A+ HS + V+
Sbjct: 73 GALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVI 132
Query: 147 HRDLKPENFSFISRDDNAL--LKVTDFG-SALLFEEGQVYRDI-VGSGFYIAPEVL---- 198
HRD+KP N NAL +K+ DFG S L ++ V +DI G Y+APE +
Sbjct: 133 HRDVKPSNVLI-----NALGQVKMCDFGISGYLVDD--VAKDIDAGCKPYMAPERINPEL 185
Query: 199 -RRRYGKEIDIWSAGVILYILLSGVPPF--WAETKKGTYDAILQGEIDFDTDPWPSISST 255
++ Y + DIWS G+ + L P+ W + + + D S+
Sbjct: 186 NQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD---KFSAE 242
Query: 256 AKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRM 299
D + L K+ K R T ++++HP+ D + +++
Sbjct: 243 FVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGTDVASFVKL 286
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 106/253 (41%), Gaps = 18/253 (7%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSI--AKKPKMRLAENDMIRREIQIRLYLSGQP 84
GR +G GQFG + S P +I K ++ + +R + P
Sbjct: 11 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF--DHP 68
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA--IVNAVNVCHS 142
++V+ E V ++MELC G+L + + Y+ + A+ +L A + A+ S
Sbjct: 69 HIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDL-ASLILYAYQLSTALAYLES 126
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF--YIAPEVLR- 199
+HRD+ N S D +K+ DFG + E+ Y+ G ++APE +
Sbjct: 127 KRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 183
Query: 200 RRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
RR+ D+W GV ++ IL+ GV PF I GE P+ T
Sbjct: 184 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLYS 240
Query: 259 LVRRMLTKDPKRR 271
L+ + DP RR
Sbjct: 241 LMTKCWAYDPSRR 253
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 31/193 (16%)
Query: 44 ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103
+ ST+ P + S P +++ D + + P V +++ M
Sbjct: 92 DESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVY-----------LYIQM 140
Query: 104 ELCEGGDLFDRIIAKGYNSERDAATVLR---AIVNAVNVCHSMGVMHRDLKPENFSFISR 160
+LC +L D + + +R+ L I AV HS G+MHRDLKP N F +
Sbjct: 141 QLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNI-FFTM 199
Query: 161 DDNALLKVTDFGSALLFEEGQVYRDI-------------VGSGFYIAPEVLR-RRYGKEI 206
DD ++KV DFG ++ + + + VG+ Y++PE + Y ++
Sbjct: 200 DD--VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKV 257
Query: 207 DIWSAGVILYILL 219
DI+S G+IL+ LL
Sbjct: 258 DIFSLGLILFELL 270
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 106/253 (41%), Gaps = 18/253 (7%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSI--AKKPKMRLAENDMIRREIQIRLYLSGQP 84
GR +G GQFG + S P +I K ++ + +R + P
Sbjct: 16 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF--DHP 73
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA--IVNAVNVCHS 142
++V+ E V ++MELC G+L + + Y+ + A+ +L A + A+ S
Sbjct: 74 HIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDL-ASLILYAYQLSTALAYLES 131
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF--YIAPEVLR- 199
+HRD+ N S D +K+ DFG + E+ Y+ G ++APE +
Sbjct: 132 KRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 188
Query: 200 RRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
RR+ D+W GV ++ IL+ GV PF I GE P+ T
Sbjct: 189 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLYS 245
Query: 259 LVRRMLTKDPKRR 271
L+ + DP RR
Sbjct: 246 LMTKCWAYDPSRR 258
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 106/253 (41%), Gaps = 18/253 (7%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSI--AKKPKMRLAENDMIRREIQIRLYLSGQP 84
GR +G GQFG + S P +I K ++ + +R + P
Sbjct: 42 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF--DHP 99
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA--IVNAVNVCHS 142
++V+ E V ++MELC G+L + + Y+ + A+ +L A + A+ S
Sbjct: 100 HIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDL-ASLILYAYQLSTALAYLES 157
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF--YIAPEVLR- 199
+HRD+ N S D +K+ DFG + E+ Y+ G ++APE +
Sbjct: 158 KRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 214
Query: 200 RRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
RR+ D+W GV ++ IL+ GV PF I GE P+ T
Sbjct: 215 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLYS 271
Query: 259 LVRRMLTKDPKRR 271
L+ + DP RR
Sbjct: 272 LMTKCWAYDPSRR 284
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 106/253 (41%), Gaps = 18/253 (7%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSI--AKKPKMRLAENDMIRREIQIRLYLSGQP 84
GR +G GQFG + S P +I K ++ + +R + P
Sbjct: 17 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF--DHP 74
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA--IVNAVNVCHS 142
++V+ E V ++MELC G+L + + Y+ + A+ +L A + A+ S
Sbjct: 75 HIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDL-ASLILYAYQLSTALAYLES 132
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF--YIAPEVLR- 199
+HRD+ N S D +K+ DFG + E+ Y+ G ++APE +
Sbjct: 133 KRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 189
Query: 200 RRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
RR+ D+W GV ++ IL+ GV PF I GE P+ T
Sbjct: 190 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLYS 246
Query: 259 LVRRMLTKDPKRR 271
L+ + DP RR
Sbjct: 247 LMTKCWAYDPSRR 259
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 20/221 (9%)
Query: 71 RREIQIRLYLSGQ---PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERD 125
RR+ + GQ PNV+ + T V ++ E E G L D + + G +
Sbjct: 52 RRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQ 110
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ---V 182
+LR I + M +HR L N I + N + KV+DFG + E+
Sbjct: 111 LVGMLRGIAAGMKYLADMNYVHRALAARN---ILVNSNLVCKVSDFGLSRFLEDDTSDPT 167
Query: 183 YRDIVGSGF---YIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAI 237
Y +G + APE ++ R++ D+WS G++++ ++S G P+W T + +AI
Sbjct: 168 YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI 227
Query: 238 LQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVL 278
Q D+ P S L+ KD R Q++
Sbjct: 228 EQ---DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIV 265
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 106/253 (41%), Gaps = 18/253 (7%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSI--AKKPKMRLAENDMIRREIQIRLYLSGQP 84
GR +G GQFG + S P +I K ++ + +R + P
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF--DHP 71
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA--IVNAVNVCHS 142
++V+ E V ++MELC G+L + + Y+ + A+ +L A + A+ S
Sbjct: 72 HIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDL-ASLILYAYQLSTALAYLES 129
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF--YIAPEVLR- 199
+HRD+ N S D +K+ DFG + E+ Y+ G ++APE +
Sbjct: 130 KRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 186
Query: 200 RRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
RR+ D+W GV ++ IL+ GV PF I GE P+ T
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLYS 243
Query: 259 LVRRMLTKDPKRR 271
L+ + DP RR
Sbjct: 244 LMTKCWAYDPSRR 256
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 106/253 (41%), Gaps = 18/253 (7%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSI--AKKPKMRLAENDMIRREIQIRLYLSGQP 84
GR +G GQFG + S P +I K ++ + +R + P
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF--DHP 71
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA--IVNAVNVCHS 142
++V+ E V ++MELC G+L + + Y+ + A+ +L A + A+ S
Sbjct: 72 HIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDL-ASLILYAYQLSTALAYLES 129
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF--YIAPEVLR- 199
+HRD+ N S D +K+ DFG + E+ Y+ G ++APE +
Sbjct: 130 KRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 186
Query: 200 RRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
RR+ D+W GV ++ IL+ GV PF I GE P+ T
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLYS 243
Query: 259 LVRRMLTKDPKRR 271
L+ + DP RR
Sbjct: 244 LMTKCWAYDPSRR 256
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 106/253 (41%), Gaps = 18/253 (7%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSI--AKKPKMRLAENDMIRREIQIRLYLSGQP 84
GR +G GQFG + S P +I K ++ + +R + P
Sbjct: 19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF--DHP 76
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA--IVNAVNVCHS 142
++V+ E V ++MELC G+L + + Y+ + A+ +L A + A+ S
Sbjct: 77 HIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDL-ASLILYAYQLSTALAYLES 134
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF--YIAPEVLR- 199
+HRD+ N S D +K+ DFG + E+ Y+ G ++APE +
Sbjct: 135 KRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 191
Query: 200 RRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
RR+ D+W GV ++ IL+ GV PF I GE P+ T
Sbjct: 192 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLYS 248
Query: 259 LVRRMLTKDPKRR 271
L+ + DP RR
Sbjct: 249 LMTKCWAYDPSRR 261
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 34/211 (16%)
Query: 29 RMLGRGQFG-VSYLC---TENSTNRPYACKSIAK--KPKMRLAENDMIRREIQIRLYLSG 82
R LG G FG VS C T + T A K++ P+ R ++EI I L
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSG----WKQEIDILRTLYH 75
Query: 83 QPNVVEFKSTYED--ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC 140
+ +++++K ED E ++ +VME G L D + R + + + ++ A +C
Sbjct: 76 E-HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-------PRHSIGLAQLLLFAQQIC 127
Query: 141 ------HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG---- 190
H+ +HR+L N + D++ L+K+ DFG A EG Y + G
Sbjct: 128 EGMAYLHAQHYIHRNLAARN---VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 184
Query: 191 FYIAPEVLRR-RYGKEIDIWSAGVILYILLS 220
F+ APE L+ ++ D+WS GV LY LL+
Sbjct: 185 FWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 18/253 (7%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSI--AKKPKMRLAENDMIRREIQIRLYLSGQP 84
GR +G GQFG + S P +I K ++ + +R + P
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF--DHP 451
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA--IVNAVNVCHS 142
++V+ E V ++MELC G+L + + ++ + A+ +L A + A+ S
Sbjct: 452 HIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDL-ASLILYAYQLSTALAYLES 509
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF--YIAPEVLR- 199
+HRD+ N S D +K+ DFG + E+ Y+ G ++APE +
Sbjct: 510 KRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 566
Query: 200 RRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
RR+ D+W GV ++ IL+ GV PF I GE P+ T
Sbjct: 567 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLYS 623
Query: 259 LVRRMLTKDPKRR 271
L+ + DP RR
Sbjct: 624 LMTKCWAYDPSRR 636
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 22/188 (11%)
Query: 98 AVHVVMELCEGGDLFDRIIAKGYNSERD---AATVLRAIVNAVNVCHSMGVMHRDLKPEN 154
+ + ME C+ G L ++ I K + D A + I V+ HS ++HRDLKP N
Sbjct: 108 CLFIQMEFCDKGTL-EQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSN 166
Query: 155 FSFISRDDNALLKVTDFGSAL-LFEEGQVYRDIVGSGFYIAPEVLRRR-YGKEIDIWSAG 212
+ D +K+ DFG L +G+ R G+ Y++PE + + YGKE+D+++ G
Sbjct: 167 IFLV---DTKQVKIGDFGLVTSLKNDGKRTRS-KGTLRYMSPEQISSQDYGKEVDLYALG 222
Query: 213 VILYILLSGVPPFWAETKKGT--YDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKR 270
+IL LL + +K T D I+ D K L++++L+K P+
Sbjct: 223 LILAELLHVCDTAFETSKFFTDLRDGIISDIFD----------KKEKTLLQKLLSKKPED 272
Query: 271 RITAAQVL 278
R +++L
Sbjct: 273 RPNTSEIL 280
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 90/227 (39%), Gaps = 38/227 (16%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G F YL T P + IA K + + I E+Q GQ NV+ K
Sbjct: 29 IGEGTFSSVYLATAQLQVGPE--EKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVK 86
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
+ V + M E D + + + R+ + + A+ H G++HRD+
Sbjct: 87 YCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVRE---YMLNLFKALKRIHQFGIVHRDV 143
Query: 151 KPENFSFISRDDNALLKVTDFGSA----------LLFEEGQVYRDIV------------- 187
KP NF + R L DFG A L F + + ++
Sbjct: 144 KPSNFLYNRRLKKYAL--VDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQ 201
Query: 188 ------GSGFYIAPEVLRRRYGK--EIDIWSAGVILYILLSGVPPFW 226
G+ + APEVL + + ID+WSAGVI LLSG PF+
Sbjct: 202 QVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY 248
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 24/226 (10%)
Query: 29 RMLGRGQFG---VSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ-- 83
R++G G+FG L P A K+ +++ + RR+ + GQ
Sbjct: 28 RVIGAGEFGEVCSGRLKLPGKRELPVAIKT------LKVGYTEKQRRDFLGEASIMGQFD 81
Query: 84 -PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVC 140
PN++ + V +V E E G L D + K G + +LR I +
Sbjct: 82 HPNIIHLEGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVGMLRGISAGMKYL 140
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG----FYIAPE 196
MG +HRDL N I + N + KV+DFG + + E+ G + APE
Sbjct: 141 SDMGYVHRDLAARN---ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPE 197
Query: 197 VLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
+ R++ D+WS G++++ ++S G P+W T + A+ +G
Sbjct: 198 AIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEG 243
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 118/272 (43%), Gaps = 46/272 (16%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89
++G G FG + + Y K + N+ RE++ L N+V +
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVK-------YNNEKAEREVKALAKLD-HVNIVHY 69
Query: 90 KST-----YEDETA-----------VHVVMELCEGGDLFDRIIAKGYNSERD---AATVL 130
Y+ ET+ + + ME C+ G L ++ I K + D A +
Sbjct: 70 NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTL-EQWIEKRRGEKLDKVLALELF 128
Query: 131 RAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL-LFEEGQVYRDIVGS 189
I V+ HS +++RDLKP N + D +K+ DFG L +G+ R G+
Sbjct: 129 EQITKGVDYIHSKKLINRDLKPSNIFLV---DTKQVKIGDFGLVTSLKNDGKRXRS-KGT 184
Query: 190 GFYIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGT--YDAILQGEIDFDT 246
Y++PE + + YGKE+D+++ G+IL LL + +K T D I+ D
Sbjct: 185 LRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFD--- 241
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVL 278
K L++++L+K P+ R +++L
Sbjct: 242 -------KKEKTLLQKLLSKKPEDRPNTSEIL 266
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA---ENDMIR--REIQIRLYLSG 82
G+ +G G FG Y + A P+ A E ++R R + I L++
Sbjct: 18 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 76
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRI-IAKGYNSERDAATVLRAIVNAVNVCH 141
Y + + +V + CEG L+ + I + + R ++ H
Sbjct: 77 ----------YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 126
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL---FEEGQVYRDIVGSGFYIAPEVL 198
+ ++HRDLK N F+ D +K+ DFG A + + + + GS ++APEV+
Sbjct: 127 AKSIIHRDLKSNNI-FLHED--LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 183
Query: 199 RRR----YGKEIDIWSAGVILYILLSGVPPF 225
R + Y + D+++ G++LY L++G P+
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 86/203 (42%), Gaps = 13/203 (6%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRREIQIRLYLSGQPNV 86
G G G FGV Y N+T A K +A + E +EI++ + N+
Sbjct: 27 GNKXGEGGFGVVYKGYVNNTT--VAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHE-NL 83
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN---SERDAATVLRAIVNAVNVCHSM 143
VE D + +V G L DR+ S + + N +N H
Sbjct: 84 VELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHEN 143
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALL---FEEGQVYRDIVGSGFYIAPEVLRR 200
+HRD+K N I D+ K++DFG A F + IVG+ Y APE LR
Sbjct: 144 HHIHRDIKSAN---ILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRG 200
Query: 201 RYGKEIDIWSAGVILYILLSGVP 223
+ DI+S GV+L +++G+P
Sbjct: 201 EITPKSDIYSFGVVLLEIITGLP 223
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA---ENDMIR--REIQIRLYLSG 82
G+ +G G FG Y + A P+ A E ++R R + I L++
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 71
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRI-IAKGYNSERDAATVLRAIVNAVNVCH 141
Y + + +V + CEG L+ + I + + R ++ H
Sbjct: 72 ----------YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 121
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL---FEEGQVYRDIVGSGFYIAPEVL 198
+ ++HRDLK N F+ D +K+ DFG A + + + + GS ++APEV+
Sbjct: 122 AKSIIHRDLKSNNI-FLHED--LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 199 RRR----YGKEIDIWSAGVILYILLSGVPPF 225
R + Y + D+++ G++LY L++G P+
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA---ENDMIR--REIQIRLYLSG 82
G+ +G G FG Y + A P+ A E ++R R + I L++
Sbjct: 18 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 76
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRI-IAKGYNSERDAATVLRAIVNAVNVCH 141
Y + + +V + CEG L+ + I + + R ++ H
Sbjct: 77 ----------YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 126
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL---FEEGQVYRDIVGSGFYIAPEVL 198
+ ++HRDLK N F+ D +K+ DFG A + + + + GS ++APEV+
Sbjct: 127 AKSIIHRDLKSNNI-FLHED--LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 183
Query: 199 RRR----YGKEIDIWSAGVILYILLSGVPPF 225
R + Y + D+++ G++LY L++G P+
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 113/256 (44%), Gaps = 33/256 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDM---IRREIQIRLYLSGQP 84
LG+G FG ++ T N T R A K++ P+ L E + +R E ++LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY----- 79
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA--IVNAVNVCHS 142
VV E +++VME G L D + + R V A I + +
Sbjct: 80 AVV-------SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPE-VL 198
M +HRDL+ N I +N + KV DFG A L E+ + Y G+ F + APE L
Sbjct: 133 MNYVHRDLRAAN---ILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL 188
Query: 199 RRRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
R+ + D+WS G++L L + G P+ + D + +G + P +
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 245
Query: 258 DLVRRMLTKDPKRRIT 273
DL+ + KDP+ R T
Sbjct: 246 DLMCQCWRKDPEERPT 261
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 107/253 (42%), Gaps = 18/253 (7%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSI--AKKPKMRLAENDMIRREIQIRLYLSGQP 84
GR +G GQFG + S P +I K ++ + +R + P
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF--DHP 451
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA--IVNAVNVCHS 142
++V+ E V ++MELC G+L + + ++ + A+ +L A + A+ S
Sbjct: 452 HIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDL-ASLILYAYQLSTALAYLES 509
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF--YIAPEVLR- 199
+HRD+ N +S D +K+ DFG + E+ Y+ G ++APE +
Sbjct: 510 KRFVHRDIAARNV-LVSATD--CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 566
Query: 200 RRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
RR+ D+W GV ++ IL+ GV PF I GE P+ T
Sbjct: 567 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLYS 623
Query: 259 LVRRMLTKDPKRR 271
L+ + DP RR
Sbjct: 624 LMTKCWAYDPSRR 636
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA---ENDMIR--REIQIRLYLSG 82
G+ +G G FG Y + A P+ A E ++R R + I L++
Sbjct: 15 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 73
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRI-IAKGYNSERDAATVLRAIVNAVNVCH 141
Y + + +V + CEG L+ + I + + R ++ H
Sbjct: 74 ----------YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 123
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL---FEEGQVYRDIVGSGFYIAPEVL 198
+ ++HRDLK N F+ D +K+ DFG A + + + + GS ++APEV+
Sbjct: 124 AKSIIHRDLKSNNI-FLHED--LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 180
Query: 199 RRR----YGKEIDIWSAGVILYILLSGVPPF 225
R + Y + D+++ G++LY L++G P+
Sbjct: 181 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA---ENDMIR--REIQIRLYLSG 82
G+ +G G FG Y + A P+ A E ++R R + I L++
Sbjct: 41 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 99
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRI-IAKGYNSERDAATVLRAIVNAVNVCH 141
Y + + +V + CEG L+ + I + + R ++ H
Sbjct: 100 ----------YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 149
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL---FEEGQVYRDIVGSGFYIAPEVL 198
+ ++HRDLK N F+ D +K+ DFG A + + + + GS ++APEV+
Sbjct: 150 AKSIIHRDLKSNNI-FLHED--LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 206
Query: 199 RRR----YGKEIDIWSAGVILYILLSGVPPF 225
R + Y + D+++ G++LY L++G P+
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA---ENDMIR--REIQIRLYLSG 82
G+ +G G FG Y + A P+ A E ++R R + I L++
Sbjct: 40 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 98
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRI-IAKGYNSERDAATVLRAIVNAVNVCH 141
Y + + +V + CEG L+ + I + + R ++ H
Sbjct: 99 ----------YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 148
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL---FEEGQVYRDIVGSGFYIAPEVL 198
+ ++HRDLK N F+ D +K+ DFG A + + + + GS ++APEV+
Sbjct: 149 AKSIIHRDLKSNNI-FLHED--LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 205
Query: 199 RRR----YGKEIDIWSAGVILYILLSGVPPF 225
R + Y + D+++ G++LY L++G P+
Sbjct: 206 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 104/236 (44%), Gaps = 30/236 (12%)
Query: 66 ENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSE 123
EN I ++ + L P +V+ T+ T V + MEL G +++ + G E
Sbjct: 66 ENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPE 123
Query: 124 RDAATVLRAIVNAVN-VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV 182
R + AIV A+ + GV+HRD+KP N I D+ +K+ DFG + + +
Sbjct: 124 RILGKMTVAIVKALYYLKEKHGVIHRDVKPSN---ILLDERGQIKLCDFGISGRLVDDKA 180
Query: 183 YRDIVGSGFYIAPEVL------RRRYGKEIDIWSAGVILYILLSGVPPFW-AETKKGTYD 235
G Y+APE + + Y D+WS G+ L L +G P+ +T
Sbjct: 181 KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLT 240
Query: 236 AILQ-------GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
+LQ G + F D + V+ LTKD ++R ++LEH +++
Sbjct: 241 KVLQEEPPLLPGHMGFSGD--------FQSFVKDCLTKDHRKRPKYNKLLEHSFIK 288
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 27/211 (12%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA---ENDMIR--REIQIRLYLSG 82
G+ +G G FG Y + A P+ A E ++R R + I L++
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 71
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRI-IAKGYNSERDAATVLRAIVNAVNVCH 141
Y + +V + CEG L+ + I + + R ++ H
Sbjct: 72 ----------YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 121
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL---FEEGQVYRDIVGSGFYIAPEVL 198
+ ++HRDLK N F+ D +K+ DFG A + + + + GS ++APEV+
Sbjct: 122 AKSIIHRDLKSNNI-FLHED--LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 199 RRR----YGKEIDIWSAGVILYILLSGVPPF 225
R + Y + D+++ G++LY L++G P+
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 120/284 (42%), Gaps = 33/284 (11%)
Query: 3 CSVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAK---K 59
C SK Q + A+E LG+G FG ++ T N T R A K++
Sbjct: 164 CPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMS 222
Query: 60 PKMRLAENDM---IRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRII 116
P+ L E + +R E ++LY VV E +++V E G L D +
Sbjct: 223 PEAFLQEAQVMKKLRHEKLVQLY-----AVV-------SEEPIYIVTEYMSKGSLLDFLK 270
Query: 117 AKGYNSERDAATVLRA--IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174
+ R V A I + + M +HRDL+ N I +N + KV DFG A
Sbjct: 271 GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN---ILVGENLVCKVADFGLA 327
Query: 175 LLFEEGQVYRDIVGSGF---YIAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWAET 229
L E+ + Y G+ F + APE L R+ + D+WS G++L L + G P+
Sbjct: 328 RLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 386
Query: 230 KKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRIT 273
+ D + +G + P + DL+ + K+P+ R T
Sbjct: 387 NREVLDQVERG---YRMPCPPECPESLHDLMCQCWRKEPEERPT 427
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 114/282 (40%), Gaps = 23/282 (8%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LGRG +GV + + A K I + + E + ++ I + P V F
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRI--RATVNSQEQKRLLMDLDISMRTVDCPFTVTFY 116
Query: 91 STYEDETAVHVVMELCEGG--DLFDRIIAKGYNSERDA-ATVLRAIVNAVNVCHS-MGVM 146
E V + MEL + + ++I KG D + +IV A+ HS + V+
Sbjct: 117 GALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVI 176
Query: 147 HRDLKPENFSFISRDDNAL--LKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL-----R 199
HRD+KP N NAL +K+ DFG + + G Y+APE + +
Sbjct: 177 HRDVKPSNVLI-----NALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQ 231
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPF--WAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
+ Y + DIWS G+ + L P+ W + + + D S+
Sbjct: 232 KGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD---KFSAEFV 288
Query: 258 DLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRM 299
D + L K+ K R T ++++HP+ D + +++
Sbjct: 289 DFTSQCLKKNSKERPTYPELMQHPFFTLHESKGTDVASFVKL 330
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 112/256 (43%), Gaps = 33/256 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDM---IRREIQIRLYLSGQP 84
LG+G FG ++ T N T R A K++ P+ L E + IR E ++LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLY----- 79
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA--IVNAVNVCHS 142
VV E +++V E G L D + + R V A I + +
Sbjct: 80 AVV-------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPE-VL 198
M +HRDL+ N I +N + KV DFG A L E+ + Y G+ F + APE L
Sbjct: 133 MNYVHRDLRAAN---ILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL 188
Query: 199 RRRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
R+ + D+WS G++L L + G P+ + D + +G + P +
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 245
Query: 258 DLVRRMLTKDPKRRIT 273
DL+ + KDP+ R T
Sbjct: 246 DLMCQCWRKDPEERPT 261
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 120/284 (42%), Gaps = 33/284 (11%)
Query: 3 CSVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAK---K 59
C SK Q + A+E LG+G FG ++ T N T R A K++
Sbjct: 164 CPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMS 222
Query: 60 PKMRLAENDM---IRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRII 116
P+ L E + +R E ++LY VV E +++V E G L D +
Sbjct: 223 PEAFLQEAQVMKKLRHEKLVQLY-----AVV-------SEEPIYIVTEYMSKGSLLDFLK 270
Query: 117 AKGYNSERDAATVLRA--IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174
+ R V A I + + M +HRDL+ N I +N + KV DFG A
Sbjct: 271 GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN---ILVGENLVCKVADFGLA 327
Query: 175 LLFEEGQVYRDIVGSGF---YIAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWAET 229
L E+ + Y G+ F + APE L R+ + D+WS G++L L + G P+
Sbjct: 328 RLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 386
Query: 230 KKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRIT 273
+ D + +G + P + DL+ + K+P+ R T
Sbjct: 387 NREVLDQVERG---YRMPCPPECPESLHDLMCQCWRKEPEERPT 427
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 113/256 (44%), Gaps = 33/256 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDM---IRREIQIRLYLSGQP 84
LG+G FG ++ T N T R A K++ P+ L E + +R E ++LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY----- 79
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA--IVNAVNVCHS 142
VV E +++V+E G L D + + R V A I + +
Sbjct: 80 AVV-------SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPE-VL 198
M +HRDL+ N I +N + KV DFG A L E+ + Y G+ F + APE L
Sbjct: 133 MNYVHRDLRAAN---ILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL 188
Query: 199 RRRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
R+ + D+WS G++L L + G P+ + D + +G + P +
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 245
Query: 258 DLVRRMLTKDPKRRIT 273
DL+ + KDP+ R T
Sbjct: 246 DLMCQCWRKDPEERPT 261
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 119/284 (41%), Gaps = 33/284 (11%)
Query: 3 CSVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAK---K 59
C SK Q + A+E LG+G FG ++ T N T R A K++
Sbjct: 165 CPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGNMS 223
Query: 60 PKMRLAENDM---IRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRII 116
P+ L E + +R E ++LY VV E +++V E G L D +
Sbjct: 224 PEAFLQEAQVMKKLRHEKLVQLY-----AVV-------SEEPIYIVTEYMSKGSLLDFLK 271
Query: 117 AKGYNSERDAATVLRA--IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174
+ R V A I + + M +HRDL+ N I +N + KV DFG
Sbjct: 272 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN---ILVGENLVCKVADFGLG 328
Query: 175 LLFEEGQVYRDIVGSGF---YIAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWAET 229
L E+ + Y G+ F + APE L R+ + D+WS G++L L + G P+
Sbjct: 329 RLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 387
Query: 230 KKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRIT 273
+ D + +G + P + DL+ + KDP+ R T
Sbjct: 388 NREVLDQVERG---YRMPCPPECPESLHDLMCQCWRKDPEERPT 428
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 34/211 (16%)
Query: 29 RMLGRGQFG-VSYLC---TENSTNRPYACKSIAK--KPKMRLAENDMIRREIQIRLYLSG 82
R LG G FG VS C T + T A K++ P+ R ++EI I L
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSG----WKQEIDILRTLYH 92
Query: 83 QPNVVEFKSTYEDETA--VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC 140
+ +++++K ED A + +VME G L D + R + + + ++ A +C
Sbjct: 93 E-HIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL-------PRHSIGLAQLLLFAQQIC 144
Query: 141 ------HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ----VYRDIVGSG 190
H+ +HRDL N + D++ L+K+ DFG A EG V D
Sbjct: 145 EGMAYLHAQHYIHRDLAARN---VLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPV 201
Query: 191 FYIAPEVLRR-RYGKEIDIWSAGVILYILLS 220
F+ APE L+ ++ D+WS GV LY LL+
Sbjct: 202 FWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 107/253 (42%), Gaps = 18/253 (7%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSI--AKKPKMRLAENDMIRREIQIRLYLSGQP 84
GR +G GQFG + S P +I K ++ + +R + P
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF--DHP 71
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA--IVNAVNVCHS 142
++V+ E V ++MELC G+L + + ++ + A+ +L A + A+ S
Sbjct: 72 HIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDL-ASLILYAYQLSTALAYLES 129
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF--YIAPEVLR- 199
+HRD+ N +S D +K+ DFG + E+ Y+ G ++APE +
Sbjct: 130 KRFVHRDIAARNV-LVSATD--CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 186
Query: 200 RRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
RR+ D+W GV ++ IL+ GV PF I GE P+ T
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLYS 243
Query: 259 LVRRMLTKDPKRR 271
L+ + DP RR
Sbjct: 244 LMTKCWAYDPSRR 256
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 120/284 (42%), Gaps = 33/284 (11%)
Query: 3 CSVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAK---K 59
C SK Q + A+E LG+G FG ++ T N T R A K++
Sbjct: 247 CPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMS 305
Query: 60 PKMRLAENDM---IRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRII 116
P+ L E + +R E ++LY VV E +++V E G L D +
Sbjct: 306 PEAFLQEAQVMKKLRHEKLVQLYA-----VV-------SEEPIYIVTEYMSKGSLLDFLK 353
Query: 117 AKGYNSERDAATVLRA--IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174
+ R V A I + + M +HRDL+ N I +N + KV DFG A
Sbjct: 354 GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN---ILVGENLVCKVADFGLA 410
Query: 175 LLFEEGQVYRDIVGSGF---YIAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWAET 229
L E+ + Y G+ F + APE L R+ + D+WS G++L L + G P+
Sbjct: 411 RLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 469
Query: 230 KKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRIT 273
+ D + +G + P + DL+ + K+P+ R T
Sbjct: 470 NREVLDQVERG---YRMPCPPECPESLHDLMCQCWRKEPEERPT 510
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 120/284 (42%), Gaps = 33/284 (11%)
Query: 3 CSVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAK---K 59
C SK Q + A+E LG+G FG ++ T N T R A K++
Sbjct: 164 CPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMS 222
Query: 60 PKMRLAENDM---IRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRII 116
P+ L E + +R E ++LY VV E +++V E G L D +
Sbjct: 223 PEAFLQEAQVMKKLRHEKLVQLY-----AVV-------SEEPIYIVGEYMSKGSLLDFLK 270
Query: 117 AKGYNSERDAATVLRA--IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174
+ R V A I + + M +HRDL+ N I +N + KV DFG A
Sbjct: 271 GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN---ILVGENLVCKVADFGLA 327
Query: 175 LLFEEGQVYRDIVGSGF---YIAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWAET 229
L E+ + Y G+ F + APE L R+ + D+WS G++L L + G P+
Sbjct: 328 RLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 386
Query: 230 KKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRIT 273
+ D + +G + P + DL+ + K+P+ R T
Sbjct: 387 NREVLDQVERG---YRMPCPPECPESLHDLMCQCWRKEPEERPT 427
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 27/211 (12%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA---ENDMIR--REIQIRLYLSG 82
G+ +G G FG Y + A P+ A E ++R R + I L++
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 71
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRI-IAKGYNSERDAATVLRAIVNAVNVCH 141
Y + + +V + CEG L+ + I + + R ++ H
Sbjct: 72 ----------YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 121
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL---LFEEGQVYRDIVGSGFYIAPEVL 198
+ ++HRDLK N F+ D +K+ DFG A + + + GS ++APEV+
Sbjct: 122 AKSIIHRDLKSNNI-FLHED--LTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 199 RRR----YGKEIDIWSAGVILYILLSGVPPF 225
R + Y + D+++ G++LY L++G P+
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 34/210 (16%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAK--KPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
LG G GV + A K I KP +R + I RE+Q+ L+ P +V
Sbjct: 24 LGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIR----NQIIRELQV-LHECNSPYIVG 78
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG---- 144
F + + + + ME +GG L D+++ ++A + I+ V++ G
Sbjct: 79 FYGAFYSDGEISICMEHMDGGSL-DQVL-------KEAKRIPEEILGKVSIAVLRGLAYL 130
Query: 145 -----VMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVL 198
+MHRD+KP N SR + +K+ DFG S L + + VG+ Y+APE L
Sbjct: 131 REKHQIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLID--SMANSFVGTRSYMAPERL 185
Query: 199 R-RRYGKEIDIWSAGVILYILLSG---VPP 224
+ Y + DIWS G+ L L G +PP
Sbjct: 186 QGTHYSVQSDIWSMGLSLVELAVGRYPIPP 215
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 27/211 (12%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA---ENDMIR--REIQIRLYLSG 82
G+ +G G FG Y + A P+ A E ++R R + I L++
Sbjct: 33 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 91
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRI-IAKGYNSERDAATVLRAIVNAVNVCH 141
Y + + +V + CEG L+ + I + + R ++ H
Sbjct: 92 ----------YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 141
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL---LFEEGQVYRDIVGSGFYIAPEVL 198
+ ++HRDLK N F+ D +K+ DFG A + + + GS ++APEV+
Sbjct: 142 AKSIIHRDLKSNNI-FLHED--LTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 198
Query: 199 RRR----YGKEIDIWSAGVILYILLSGVPPF 225
R + Y + D+++ G++LY L++G P+
Sbjct: 199 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 112/256 (43%), Gaps = 33/256 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDM---IRREIQIRLYLSGQP 84
LG+G FG ++ T N T R A K++ P+ L E + +R E ++LY
Sbjct: 17 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY----- 70
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA--IVNAVNVCHS 142
VV E +++V E G L D + + R V A I + +
Sbjct: 71 AVV-------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 123
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPE-VL 198
M +HRDL+ N I +N + KV DFG A L E+ + Y G+ F + APE L
Sbjct: 124 MNYVHRDLRAAN---ILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL 179
Query: 199 RRRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
R+ + D+WS G++L L + G P+ + D + +G + P +
Sbjct: 180 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 236
Query: 258 DLVRRMLTKDPKRRIT 273
DL+ + KDP+ R T
Sbjct: 237 DLMCQCWRKDPEERPT 252
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 112/256 (43%), Gaps = 33/256 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDM---IRREIQIRLYLSGQP 84
LG+G FG ++ T N T R A K++ P+ L E + +R E ++LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY----- 79
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA--IVNAVNVCHS 142
VV E +++V E G L D + + R V A I + +
Sbjct: 80 AVV-------SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPE-VL 198
M +HRDL+ N I +N + KV DFG A L E+ + Y G+ F + APE L
Sbjct: 133 MNYVHRDLRAAN---ILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL 188
Query: 199 RRRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
R+ + D+WS G++L L + G P+ + D + +G + P +
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 245
Query: 258 DLVRRMLTKDPKRRIT 273
DL+ + KDP+ R T
Sbjct: 246 DLMCQCWRKDPEERPT 261
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 29/212 (13%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA---ENDMIR--REIQIRLYLSG 82
G+ +G G FG Y + A P+ A E ++R R + I L++
Sbjct: 41 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 99
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDR--IIAKGYNSERDAATVLRAIVNAVNVC 140
Y + + +V + CEG L+ II + + + R ++
Sbjct: 100 ----------YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK-LIDIARQTAQGMDYL 148
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL---LFEEGQVYRDIVGSGFYIAPEV 197
H+ ++HRDLK N F+ D +K+ DFG A + + + GS ++APEV
Sbjct: 149 HAKSIIHRDLKSNNI-FLHED--LTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV 205
Query: 198 LRRR----YGKEIDIWSAGVILYILLSGVPPF 225
+R + Y + D+++ G++LY L++G P+
Sbjct: 206 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 112/256 (43%), Gaps = 33/256 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDM---IRREIQIRLYLSGQP 84
LG+G FG ++ T N T R A K++ P+ L E + +R E ++LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY----- 79
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA--IVNAVNVCHS 142
VV E +++V E G L D + + R V A I + +
Sbjct: 80 AVV-------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPE-VL 198
M +HRDL+ N I +N + KV DFG A L E+ + Y G+ F + APE L
Sbjct: 133 MNYVHRDLRAAN---ILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL 188
Query: 199 RRRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
R+ + D+WS G++L L + G P+ + D + +G + P +
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 245
Query: 258 DLVRRMLTKDPKRRIT 273
DL+ + KDP+ R T
Sbjct: 246 DLMCQCWRKDPEERPT 261
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 112/256 (43%), Gaps = 33/256 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDM---IRREIQIRLYLSGQP 84
LG+G FG ++ T N T R A K++ P+ L E + +R E ++LY
Sbjct: 15 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY----- 68
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA--IVNAVNVCHS 142
VV E +++V E G L D + + R V A I + +
Sbjct: 69 AVV-------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 121
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPE-VL 198
M +HRDL+ N I +N + KV DFG A L E+ + Y G+ F + APE L
Sbjct: 122 MNYVHRDLRAAN---ILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL 177
Query: 199 RRRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
R+ + D+WS G++L L + G P+ + D + +G + P +
Sbjct: 178 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 234
Query: 258 DLVRRMLTKDPKRRIT 273
DL+ + KDP+ R T
Sbjct: 235 DLMCQCWRKDPEERPT 250
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 125/299 (41%), Gaps = 43/299 (14%)
Query: 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR 77
+ED++L G +GRG FG + + N A KS + L + I
Sbjct: 113 HEDLVL----GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARI--- 165
Query: 78 LYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNA- 136
L PN+V + +++VMEL +GGD + +G + T+L+ + +A
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG--ARLRVKTLLQMVGDAA 223
Query: 137 --VNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVG----SG 190
+ S +HRDL N ++ +LK++DFG + +G VY G
Sbjct: 224 AGMEYLESKCCIHRDLAARNCLVTEKN---VLKISDFGMSREEADG-VYAASGGLRQVPV 279
Query: 191 FYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDP 248
+ APE L RY E D+WS G++L+ S G P+ + + T + + +G P
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKG----GRLP 335
Query: 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMNK 307
P + D V R+ +E W E G+ +++ ++ R+ ++
Sbjct: 336 CPEL---CPDAVFRL--------------MEQCWAYEPGQRPSFSTIYQELQSIRKRHR 377
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 18/223 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ---PN 85
+++G G+FG +C+ S+A K +++ + RR+ + GQ PN
Sbjct: 51 KVVGAGEFG--EVCSGRLKLPSKKEISVAIK-TLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSM 143
++ + V +V E E G L D + K + +LR I + + M
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG----FYIAPEVLR 199
G +HRDL N I + N + KV+DFG A + E+ G + +PE +
Sbjct: 167 GYVHRDLAARN---ILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 200 -RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
R++ D+WS G++L+ ++S G P+W + + A+ +G
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 112/256 (43%), Gaps = 33/256 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDM---IRREIQIRLYLSGQP 84
LG+G FG ++ T N T R A K++ P+ L E + +R E ++LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY----- 79
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA--IVNAVNVCHS 142
VV E +++V E G L D + + R V A I + +
Sbjct: 80 AVV-------SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPE-VL 198
M +HRDL+ N I +N + KV DFG A L E+ + Y G+ F + APE L
Sbjct: 133 MNYVHRDLRAAN---ILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL 188
Query: 199 RRRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
R+ + D+WS G++L L + G P+ + D + +G + P +
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 245
Query: 258 DLVRRMLTKDPKRRIT 273
DL+ + KDP+ R T
Sbjct: 246 DLMCQCWRKDPEERPT 261
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 111/256 (43%), Gaps = 33/256 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDM---IRREIQIRLYLSGQP 84
LG+G FG ++ T N T R A K++ P+ L E + +R E ++LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY----- 79
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA--IVNAVNVCHS 142
VV E +++V E G L D + + R V A I + +
Sbjct: 80 AVV-------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPE-VL 198
M +HRDL N I +N + KV DFG A L E+ + Y G+ F + APE L
Sbjct: 133 MNYVHRDLAAAN---ILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL 188
Query: 199 RRRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
R+ + D+WS G++L L + G P+ + D + +G + P +
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 245
Query: 258 DLVRRMLTKDPKRRIT 273
DL+ + KDP+ R T
Sbjct: 246 DLMCQCWRKDPEERPT 261
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 18/223 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ---PN 85
+++G G+FG +C+ S+A K +++ + RR+ + GQ PN
Sbjct: 51 KVVGAGEFG--EVCSGRLKLPSKKEISVAIK-TLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSM 143
++ + V +V E E G L D + K + +LR I + + M
Sbjct: 108 IIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG----FYIAPEVLR 199
G +HRDL N I + N + KV+DFG + + E+ G + +PE +
Sbjct: 167 GAVHRDLAARN---ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 200 -RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
R++ D+WS G++L+ ++S G P+W + + A+ +G
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 112/256 (43%), Gaps = 33/256 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDM---IRREIQIRLYLSGQP 84
LG+G FG ++ T N T R A K++ P+ L E + +R E ++LY
Sbjct: 19 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY----- 72
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA--IVNAVNVCHS 142
VV E +++V E G L D + + R V A I + +
Sbjct: 73 AVV-------SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 125
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPE-VL 198
M +HRDL+ N I +N + KV DFG A L E+ + Y G+ F + APE L
Sbjct: 126 MNYVHRDLRAAN---ILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL 181
Query: 199 RRRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
R+ + D+WS G++L L + G P+ + D + +G + P +
Sbjct: 182 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 238
Query: 258 DLVRRMLTKDPKRRIT 273
DL+ + K+P+ R T
Sbjct: 239 DLMCQCWRKEPEERPT 254
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 25/204 (12%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
F + +G GQFG+ +L + ++ A K+I + ++E+D I E ++ + LS P +
Sbjct: 31 FVQEIGSGQFGLVHLGYWLNKDK-VAIKTIKEG---SMSEDDFIE-EAEVMMKLS-HPKL 84
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG-- 144
V+ ++ + +V E E G L D + ++R + ++VC M
Sbjct: 85 VQLYGVCLEQAPICLVFEFMEHGCLSDYL-----RTQRGLFAAETLLGMCLDVCEGMAYL 139
Query: 145 ----VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPEV 197
V+HRDL N +N ++KV+DFG + Q Y G+ F + +PEV
Sbjct: 140 EEACVIHRDLAARN---CLVGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEV 195
Query: 198 LR-RRYGKEIDIWSAGVILYILLS 220
RY + D+WS GV+++ + S
Sbjct: 196 FSFSRYSSKSDVWSFGVLMWEVFS 219
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 105/253 (41%), Gaps = 18/253 (7%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSI--AKKPKMRLAENDMIRREIQIRLYLSGQP 84
GR +G GQFG + S P +I K ++ + +R + P
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF--DHP 71
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA--IVNAVNVCHS 142
++V+ E V ++MELC G+L + + ++ + A+ +L A + A+ S
Sbjct: 72 HIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDL-ASLILYAYQLSTALAYLES 129
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF--YIAPEVLR- 199
+HRD+ N S D +K+ DFG + E+ + G ++APE +
Sbjct: 130 KRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINF 186
Query: 200 RRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
RR+ D+W GV ++ IL+ GV PF I GE P+ T
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLYS 243
Query: 259 LVRRMLTKDPKRR 271
L+ + DP RR
Sbjct: 244 LMTKCWAYDPSRR 256
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 18/223 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ---PN 85
+++G G+FG +C+ S+A K +++ + RR+ + GQ PN
Sbjct: 51 KVVGAGEFG--EVCSGRLKLPSKKEISVAIK-TLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSM 143
++ + V +V E E G L D + K + +LR I + + M
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG----FYIAPEVLR 199
G +HRDL N I + N + KV+DFG + + E+ G + +PE +
Sbjct: 167 GFVHRDLAARN---ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 200 -RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
R++ D+WS G++L+ ++S G P+W + + A+ +G
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 125/280 (44%), Gaps = 41/280 (14%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM--IRREIQIRLYLSGQPN 85
G +LG+G FG + T T K + +R E +E+++ L PN
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKEL-----IRFDEETQRTFLKEVKVMRCLE-HPN 68
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSE---RDAATVLRAIVNAVNVCHS 142
V++F + ++ + E +GG L R I K +S+ + + I + + HS
Sbjct: 69 VLKFIGVLYKDKRLNFITEYIKGGTL--RGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS 126
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD---------------IV 187
M ++HRDL N + + N + V DFG A L + + + +V
Sbjct: 127 MNIIHRDLNSHN-CLVRENKNVV--VADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV 183
Query: 188 GSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLSGV---PPFWAETKKGTYDAILQGEID 243
G+ +++APE++ R Y +++D++S G++L ++ V P + T + ++G +D
Sbjct: 184 GNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD--FGLNVRGFLD 241
Query: 244 FDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
P+ + + R DP++R + + LEH WL
Sbjct: 242 RYCP--PNCPPSFFPITVRCCDLDPEKRPSFVK-LEH-WL 277
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 109/268 (40%), Gaps = 26/268 (9%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
HY F + LG G F L YA K I + + + +RE + L
Sbjct: 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQ---DREEAQREADMH-RLFNH 85
Query: 84 PNVVEFKS-TYEDETAVH---VVMELCEGGDLFD---RIIAKG-YNSERDAATVLRAIVN 135
PN++ + + A H +++ + G L++ R+ KG + +E +L I
Sbjct: 86 PNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICR 145
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG-------QVYRDIVG 188
+ H+ G HRDLKP N L+ + A + EG Q +
Sbjct: 146 GLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC 205
Query: 189 SGFYIAPEVLRRRYGKEI----DIWSAGVILYILLSGVPPFWAETKKGTYDAI-LQGEID 243
+ Y APE+ + I D+WS G +LY ++ G P+ +KG A+ +Q ++
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLS 265
Query: 244 FDTDPWPSISSTAKDLVRRMLTKDPKRR 271
P SS L+ M+T DP +R
Sbjct: 266 IPQS--PRHSSALWQLLNSMMTVDPHQR 291
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 7/192 (3%)
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS 142
+P+VV E + ++V L G DL + +G + A ++R I +A++ H+
Sbjct: 93 EPHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHA 152
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFG--SALLFEEGQVYRDIVGSGFYIAPEVLRR 200
G HRD+KPEN +S DD A L DFG SA E+ + VG+ +Y APE
Sbjct: 153 AGATHRDVKPENI-LVSADDFAYL--VDFGIASATTDEKLTQLGNTVGTLYYXAPERFSE 209
Query: 201 RYGK-EIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259
+ DI++ +LY L+G PP+ + + A + I + P I +
Sbjct: 210 SHATYRADIYALTCVLYECLTGSPPYQGD-QLSVXGAHINQAIPRPSTVRPGIPVAFDAV 268
Query: 260 VRRMLTKDPKRR 271
+ R K+P+ R
Sbjct: 269 IARGXAKNPEDR 280
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 18/223 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ---PN 85
+++G G+FG +C+ S+A K +++ + RR+ + GQ PN
Sbjct: 51 KVVGAGEFG--EVCSGRLKLPSKKEISVAIK-TLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSM 143
++ + V +V E E G L D + K + +LR I + + M
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG----FYIAPEVLR 199
G +HRDL N I + N + KV+DFG + + E+ G + +PE +
Sbjct: 167 GYVHRDLAARN---ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 200 -RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
R++ D+WS G++L+ ++S G P+W + + A+ +G
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 112/256 (43%), Gaps = 33/256 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDM---IRREIQIRLYLSGQP 84
LG+G FG ++ T N T R A K++ P+ L E + +R E ++LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY----- 79
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA--IVNAVNVCHS 142
VV E +++V+E G L D + + R V A I + +
Sbjct: 80 AVV-------SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPE-VL 198
M +HRDL+ N I +N + KV DFG A L E+ + G+ F + APE L
Sbjct: 133 MNYVHRDLRAAN---ILVGENLVCKVADFGLARLIEDNEXTAR-QGAKFPIKWTAPEAAL 188
Query: 199 RRRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
R+ + D+WS G++L L + G P+ + D + +G + P +
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 245
Query: 258 DLVRRMLTKDPKRRIT 273
DL+ + KDP+ R T
Sbjct: 246 DLMCQCWRKDPEERPT 261
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 18/223 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ---PN 85
+++G G+FG +C+ S+A K +++ + RR+ + GQ PN
Sbjct: 49 KVVGAGEFG--EVCSGRLKLPSKKEISVAIK-TLKVGYTEKQRRDFLGEASIMGQFDHPN 105
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSM 143
++ + V +V E E G L D + K + +LR I + + M
Sbjct: 106 IIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 164
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG----FYIAPEVLR 199
G +HRDL N I + N + KV+DFG + + E+ G + +PE +
Sbjct: 165 GYVHRDLAARN---ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 221
Query: 200 -RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
R++ D+WS G++L+ ++S G P+W + + A+ +G
Sbjct: 222 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 264
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 18/223 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ---PN 85
+++G G+FG +C+ S+A K +++ + RR+ + GQ PN
Sbjct: 51 KVVGAGEFG--EVCSGRLKLPSKKEISVAIK-TLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSM 143
++ + V +V E E G L D + K + +LR I + + M
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG----FYIAPEVLR 199
G +HRDL N I + N + KV+DFG + + E+ G + +PE +
Sbjct: 167 GYVHRDLAARN---ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 200 -RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
R++ D+WS G++L+ ++S G P+W + + A+ +G
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 18/223 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ---PN 85
+++G G+FG +C+ S+A K +++ + RR+ + GQ PN
Sbjct: 51 KVVGAGEFG--EVCSGRLKLPSKKEISVAIK-TLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSM 143
++ + V +V E E G L D + K + +LR I + + M
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG----FYIAPEVLR 199
G +HRDL N I + N + KV+DFG + + E+ G + +PE +
Sbjct: 167 GYVHRDLAARN---ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 200 -RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
R++ D+WS G++L+ ++S G P+W + + A+ +G
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 18/223 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ---PN 85
+++G G+FG +C+ S+A K +++ + RR+ + GQ PN
Sbjct: 22 KVVGAGEFG--EVCSGRLKLPSKKEISVAIK-TLKVGYTEKQRRDFLGEASIMGQFDHPN 78
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSM 143
++ + V +V E E G L D + K + +LR I + + M
Sbjct: 79 IIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 137
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG----FYIAPEVLR 199
G +HRDL N I + N + KV+DFG + + E+ G + +PE +
Sbjct: 138 GYVHRDLAARN---ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 194
Query: 200 -RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
R++ D+WS G++L+ ++S G P+W + + A+ +G
Sbjct: 195 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 237
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ---PN 85
+++G G+FG +C+ S+A K +++ + RR+ + GQ PN
Sbjct: 51 KVVGAGEFG--EVCSGRLKLPSKKEISVAIK-TLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSM 143
++ + V +V E E G L D + K + +LR I + + M
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG----FYIAPEVLR 199
G +HRDL N I + N + KV+DFG + E+ G + +PE +
Sbjct: 167 GYVHRDLAARN---ILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 200 -RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
R++ D+WS G++L+ ++S G P+W + + A+ +G
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 18/223 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ---PN 85
+++G G+FG +C+ S+A K +++ + RR+ + GQ PN
Sbjct: 51 KVVGAGEFG--EVCSGRLKLPSKKEISVAIK-TLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSM 143
++ + V +V E E G L D + K + +LR I + + M
Sbjct: 108 IIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG----FYIAPEVLR 199
G +HRDL N I + N + KV+DFG + + E+ G + +PE +
Sbjct: 167 GYVHRDLAARN---ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 200 -RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
R++ D+WS G++L+ ++S G P+W + + A+ +G
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 124/301 (41%), Gaps = 47/301 (15%)
Query: 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR 77
+ED++L G +GRG FG + + N A KS + L + I
Sbjct: 113 HEDLVL----GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARI--- 165
Query: 78 LYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNA- 136
L PN+V + +++VMEL +GGD + +G + T+L+ + +A
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG--ARLRVKTLLQMVGDAA 223
Query: 137 --VNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF--- 191
+ S +HRDL N ++ +LK++DFG + EE G G
Sbjct: 224 AGMEYLESKCCIHRDLAARNCLVTEKN---VLKISDFGMSR--EEADGVXAASG-GLRQV 277
Query: 192 ---YIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDT 246
+ APE L RY E D+WS G++L+ S G P+ + + T + + +G
Sbjct: 278 PVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKG----GR 333
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMN 306
P P + D V R+ +E W E G+ +++ ++ R+ +
Sbjct: 334 LPCPEL---CPDAVFRL--------------MEQCWAYEPGQRPSFSTIYQELQSIRKRH 376
Query: 307 K 307
+
Sbjct: 377 R 377
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 18/223 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ---PN 85
+++G G+FG +C+ S+A K +++ + RR+ + GQ PN
Sbjct: 22 KVVGAGEFG--EVCSGRLKLPSKKEISVAIK-TLKVGYTEKQRRDFLGEASIMGQFDHPN 78
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSM 143
++ + V +V E E G L D + K + +LR I + + M
Sbjct: 79 IIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 137
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG----FYIAPEVLR 199
G +HRDL N I + N + KV+DFG + + E+ G + +PE +
Sbjct: 138 GYVHRDLAARN---ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 194
Query: 200 -RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
R++ D+WS G++L+ ++S G P+W + + A+ +G
Sbjct: 195 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 237
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 18/223 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ---PN 85
+++G G+FG +C+ S+A K +++ + RR+ + GQ PN
Sbjct: 51 KVVGAGEFG--EVCSGRLKLPSKKEISVAIK-TLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSM 143
++ + V +V E E G L D + K + +LR I + + M
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG----FYIAPEVLR 199
G +HRDL N I + N + KV+DFG + + E+ G + +PE +
Sbjct: 167 GYVHRDLAARN---ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 200 -RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
R++ D+WS G++L+ ++S G P+W + + A+ +G
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 18/223 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ---PN 85
+++G G+FG +C+ S+A K +++ + RR+ + GQ PN
Sbjct: 39 KVVGAGEFG--EVCSGRLKLPSKKEISVAIK-TLKVGYTEKQRRDFLGEASIMGQFDHPN 95
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSM 143
++ + V +V E E G L D + K + +LR I + + M
Sbjct: 96 IIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 154
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG----FYIAPEVLR 199
G +HRDL N I + N + KV+DFG + + E+ G + +PE +
Sbjct: 155 GYVHRDLAARN---ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 211
Query: 200 -RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
R++ D+WS G++L+ ++S G P+W + + A+ +G
Sbjct: 212 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 254
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 79/213 (37%), Gaps = 69/213 (32%)
Query: 133 IVNAVNVCHSMGVMHRDLKPENFSFISRD----------------DNALLKVTDFGSALL 176
+ +A+ H + H DLKPEN F++ + N ++V DFGSA
Sbjct: 164 LCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF 223
Query: 177 FEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYD 235
E IV + Y PEV L + + D+WS G IL+ G F +T +
Sbjct: 224 DHEHHT--TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLF--QTHENREH 279
Query: 236 AILQGEIDFDTDPWPS--ISSTAK------------------------------------ 257
++ +I P PS I T K
Sbjct: 280 LVMMEKI---LGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDS 336
Query: 258 -------DLVRRMLTKDPKRRITAAQVLEHPWL 283
DL+RRML DP +RIT A+ L HP+
Sbjct: 337 LEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 369
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 25/204 (12%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
F + +G GQFG+ +L + ++ A K+I + ++E D I E ++ + LS P +
Sbjct: 9 FVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGA---MSEEDFIE-EAEVMMKLS-HPKL 62
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG-- 144
V+ ++ + +V E E G L D + ++R + ++VC M
Sbjct: 63 VQLYGVCLEQAPICLVFEFMEHGCLSDYL-----RTQRGLFAAETLLGMCLDVCEGMAYL 117
Query: 145 ----VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPEV 197
V+HRDL N +N ++KV+DFG + Q Y G+ F + +PEV
Sbjct: 118 EEACVIHRDLAARN---CLVGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEV 173
Query: 198 LR-RRYGKEIDIWSAGVILYILLS 220
RY + D+WS GV+++ + S
Sbjct: 174 FSFSRYSSKSDVWSFGVLMWEVFS 197
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 25/204 (12%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
F + +G GQFG+ +L + ++ A K+I + ++E D I E ++ + LS P +
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGA---MSEEDFIE-EAEVMMKLS-HPKL 64
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG-- 144
V+ ++ + +V E E G L D + ++R + ++VC M
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYL-----RTQRGLFAAETLLGMCLDVCEGMAYL 119
Query: 145 ----VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPEV 197
V+HRDL N +N ++KV+DFG + Q Y G+ F + +PEV
Sbjct: 120 EEACVIHRDLAARN---CLVGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEV 175
Query: 198 LR-RRYGKEIDIWSAGVILYILLS 220
RY + D+WS GV+++ + S
Sbjct: 176 FSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 25/204 (12%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
F + +G GQFG+ +L + ++ A K+I + ++E D I E ++ + LS P +
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGA---MSEEDFIE-EAEVMMKLS-HPKL 64
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG-- 144
V+ ++ + +V E E G L D + ++R + ++VC M
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYL-----RTQRGLFAAETLLGMCLDVCEGMAYL 119
Query: 145 ----VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPEV 197
V+HRDL N +N ++KV+DFG + Q Y G+ F + +PEV
Sbjct: 120 EEASVIHRDLAARN---CLVGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEV 175
Query: 198 LR-RRYGKEIDIWSAGVILYILLS 220
RY + D+WS GV+++ + S
Sbjct: 176 FSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 79/213 (37%), Gaps = 69/213 (32%)
Query: 133 IVNAVNVCHSMGVMHRDLKPENFSFISRD----------------DNALLKVTDFGSALL 176
+ +A+ H + H DLKPEN F++ + N ++V DFGSA
Sbjct: 141 LCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF 200
Query: 177 FEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYD 235
E IV + Y PEV L + + D+WS G IL+ G F +T +
Sbjct: 201 DHEHHT--TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLF--QTHENREH 256
Query: 236 AILQGEIDFDTDPWPS--ISSTAK------------------------------------ 257
++ +I P PS I T K
Sbjct: 257 LVMMEKI---LGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDS 313
Query: 258 -------DLVRRMLTKDPKRRITAAQVLEHPWL 283
DL+RRML DP +RIT A+ L HP+
Sbjct: 314 LEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 346
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 96/223 (43%), Gaps = 18/223 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ---PN 85
+++G G+FG + C +I ++ D RR+ + GQ PN
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKT---LKAGYTDKQRRDFLSEASIMGQFDHPN 91
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSM 143
++ + V ++ E E G L D + K G + +LR I + + M
Sbjct: 92 IIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 150
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG----FYIAPEVLR 199
+HRDL N I + N + KV+DFG + + E+ G + APE +
Sbjct: 151 SAVHRDLAARN---ILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 207
Query: 200 -RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
R++ D+WS G++++ ++S G P+W + + AI +G
Sbjct: 208 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 250
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 122/283 (43%), Gaps = 48/283 (16%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
F + +G GQFG+ +L + ++ A K+I + ++E D I E ++ + LS P +
Sbjct: 14 FVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGA---MSEEDFIE-EAEVMMKLS-HPKL 67
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG-- 144
V+ ++ + +V E E G L D + ++R + ++VC M
Sbjct: 68 VQLYGVCLEQAPICLVFEFMEHGCLSDYL-----RTQRGLFAAETLLGMCLDVCEGMAYL 122
Query: 145 ----VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPEV 197
V+HRDL N +N ++KV+DFG + Q Y G+ F + +PEV
Sbjct: 123 EEACVIHRDLAARN---CLVGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEV 178
Query: 198 LR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256
RY + D+WS GV+++ + S +G+I ++ S S
Sbjct: 179 FSFSRYSSKSDVWSFGVLMWEVFS------------------EGKIPYENR---SNSEVV 217
Query: 257 KDLVRRMLTKDPKRRITAA-QVLEHPWLRESGEASDDTSVILR 298
+D+ P+ T Q++ H W RE E S +LR
Sbjct: 218 EDISTGFRLYKPRLASTHVYQIMNHCW-RERPEDRPAFSRLLR 259
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 79/213 (37%), Gaps = 69/213 (32%)
Query: 133 IVNAVNVCHSMGVMHRDLKPENFSFISRD----------------DNALLKVTDFGSALL 176
+ +A+ H + H DLKPEN F++ + N ++V DFGSA
Sbjct: 132 LCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF 191
Query: 177 FEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYD 235
E IV + Y PEV L + + D+WS G IL+ G F +T +
Sbjct: 192 DHEHHT--TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLF--QTHENREH 247
Query: 236 AILQGEIDFDTDPWPS--ISSTAK------------------------------------ 257
++ +I P PS I T K
Sbjct: 248 LVMMEKI---LGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDS 304
Query: 258 -------DLVRRMLTKDPKRRITAAQVLEHPWL 283
DL+RRML DP +RIT A+ L HP+
Sbjct: 305 LEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 337
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
F + +G GQFG+ +L + ++ A K+I + ++E D I E ++ + LS P +
Sbjct: 12 FVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGA---MSEEDFIE-EAEVMMKLS-HPKL 65
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG-- 144
V+ ++ + +V E E G L D + ++R + ++VC M
Sbjct: 66 VQLYGVCLEQAPICLVTEFMEHGCLSDYL-----RTQRGLFAAETLLGMCLDVCEGMAYL 120
Query: 145 ----VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPEV 197
V+HRDL N +N ++KV+DFG + Q Y G+ F + +PEV
Sbjct: 121 EEACVIHRDLAARN---CLVGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEV 176
Query: 198 LR-RRYGKEIDIWSAGVILYILLS-GVPPF 225
RY + D+WS GV+++ + S G P+
Sbjct: 177 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 206
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 111/256 (43%), Gaps = 33/256 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDM---IRREIQIRLYLSGQP 84
LG+G FG ++ T N T R A K++ P+ L E + +R E ++LY
Sbjct: 23 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY----- 76
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATV--LRAIVNAVNVCHS 142
VV E +++V E G L D + + R V I + +
Sbjct: 77 AVV-------SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER 129
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPE-VL 198
M +HRDL+ N I +N + KV DFG A L E+ + Y G+ F + APE L
Sbjct: 130 MNYVHRDLRAAN---ILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL 185
Query: 199 RRRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
R+ + D+WS G++L L + G P+ + D + +G + P +
Sbjct: 186 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 242
Query: 258 DLVRRMLTKDPKRRIT 273
DL+ + K+P+ R T
Sbjct: 243 DLMCQCWRKEPEERPT 258
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 10/144 (6%)
Query: 317 VEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEA--VKNS 374
E L +EE LKE F +DTD +GT+++DEL+ GL +VGS L E ++K LM+A + S
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 375 STLE-----SLCENLPTKEKQK-LMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEV 428
T++ + +L E+++ L+ F D D S +TL +
Sbjct: 61 GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDI--HI 118
Query: 429 NQYMEAGDIDGNGNIDSIEFVNLM 452
+ ++ D D +G ID EF +M
Sbjct: 119 DDMIKEIDQDNDGQIDYGEFAAMM 142
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 45/95 (47%)
Query: 381 CENLPTKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQYMEAGDIDGN 440
E L +E L E F+ +DTDNS T+T SE+ M+A DID +
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 441 GNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNS 475
G ID EF+ + KLE E L AF Y DK+
Sbjct: 61 GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDG 95
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 87/177 (49%), Gaps = 10/177 (5%)
Query: 287 GEASDDTSVILRMKQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYD 346
G ++++ +K F++ N+LKK+ + +I ++L D E L+ FI +D D +GTLS
Sbjct: 18 GHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQ 77
Query: 347 ELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENL--PTKEKQKLMEK------FRE 398
E+ GL K+G D+ ++ + ++++ + + T +KQ ++K F+
Sbjct: 78 EILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKF 137
Query: 399 MDTDNSDTLTLSXXXXX--XXXXXXXXXXSEVNQYMEAGDIDGNGNIDSIEFVNLMT 453
D D + +++ ++ ++ D++G+G ID EF+ +M+
Sbjct: 138 FDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMS 194
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G FG Y + K + P+ A R E+ + L + N++ F
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQA----FRNEVAV-LRKTRHVNILLFM 98
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSER-DAATVLRAIVNAVNVCHSMGVMHRD 149
Y + + +V + CEG L+ + + + + R ++ H+ ++HRD
Sbjct: 99 G-YMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRD 157
Query: 150 LKPENFSFISRDDNALLKVTDFGSALL---FEEGQVYRDIVGSGFYIAPEVLRRR----Y 202
+K N I + +K+ DFG A + + Q GS ++APEV+R + +
Sbjct: 158 MKSNN---IFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 203 GKEIDIWSAGVILYILLSGVPPF 225
+ D++S G++LY L++G P+
Sbjct: 215 SFQSDVYSYGIVLYELMTGELPY 237
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 96/223 (43%), Gaps = 18/223 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ---PN 85
+++G G+FG + C +I ++ D RR+ + GQ PN
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKT---LKAGYTDKQRRDFLSEASIMGQFDHPN 76
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSM 143
++ + V ++ E E G L D + K G + +LR I + + M
Sbjct: 77 IIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 135
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG----FYIAPEVLR 199
+HRDL N I + N + KV+DFG + + E+ G + APE +
Sbjct: 136 SYVHRDLAARN---ILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 192
Query: 200 -RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
R++ D+WS G++++ ++S G P+W + + AI +G
Sbjct: 193 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 235
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 96/223 (43%), Gaps = 18/223 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ---PN 85
+++G G+FG + C +I ++ D RR+ + GQ PN
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKT---LKAGYTDKQRRDFLSEASIMGQFDHPN 70
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSM 143
++ + V ++ E E G L D + K G + +LR I + + M
Sbjct: 71 IIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 129
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG----FYIAPEVLR 199
+HRDL N I + N + KV+DFG + + E+ G + APE +
Sbjct: 130 SYVHRDLAARN---ILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 186
Query: 200 -RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
R++ D+WS G++++ ++S G P+W + + AI +G
Sbjct: 187 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 229
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 85/210 (40%), Gaps = 63/210 (30%)
Query: 133 IVNAVNVCHSMGVMHRDLKPENFSFIS------------RDDNAL----LKVTDFGSALL 176
+ AV H + H DLKPEN F++ RD+ ++ ++V DFGSA
Sbjct: 146 LCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATF 205
Query: 177 FEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWA-------- 227
E + IV + Y APEV L + + D+WS G I++ G F
Sbjct: 206 DHEH--HSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLA 263
Query: 228 ---------------ETKKGTYDAILQGEIDFDTDPWPS-------------ISSTAK-- 257
+T+K Y +G +D+D + ++S A+
Sbjct: 264 MMERILGPIPSRMIRKTRKQKY--FYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEH 321
Query: 258 ----DLVRRMLTKDPKRRITAAQVLEHPWL 283
DL+ ML +P +R+T + L+HP+
Sbjct: 322 HQLFDLIESMLEYEPAKRLTLGEALQHPFF 351
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 111/259 (42%), Gaps = 29/259 (11%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE---NDMIRREIQIRLYLSGQPNVV 87
LG GQ+G Y + A K++ K+ M + E + +EI+ PN+V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 72
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVL----RAIVNAVNVCHSM 143
+ E ++++E G+L D + + N + +A VL I +A+
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPEVLR- 199
+HRDL N +N L+KV DFG + L G Y G+ F + APE L
Sbjct: 131 NFIHRDLAARN---CLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 200 RRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
++ + D+W+ GV+L+ I G+ P+ Y+ + E D+ + +
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYE 243
Query: 259 LVRRMLTKDPKRRITAAQV 277
L+R +P R + A++
Sbjct: 244 LMRACWQWNPSDRPSFAEI 262
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 111/259 (42%), Gaps = 29/259 (11%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE---NDMIRREIQIRLYLSGQPNVV 87
LG GQ+G Y + A K++ K+ M + E + +EI+ PN+V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 72
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVL----RAIVNAVNVCHSM 143
+ E ++++E G+L D + + N + +A VL I +A+
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPEVLR- 199
+HRDL N +N L+KV DFG + L G Y G+ F + APE L
Sbjct: 131 NFIHRDLAARN---CLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 200 RRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
++ + D+W+ GV+L+ I G+ P+ Y+ + E D+ + +
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYE 243
Query: 259 LVRRMLTKDPKRRITAAQV 277
L+R +P R + A++
Sbjct: 244 LMRACWQWNPSDRPSFAEI 262
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 33/181 (18%)
Query: 133 IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY 192
I+ ++V H GV+HRDL P N I DN + + DF A V +Y
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGN---ILLADNNDITICDFNLAREDTADANKTHYVTHRWY 199
Query: 193 IAPEVLRRRYG--KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ-------GEID 243
APE++ + G K +D+WSAG ++ + + F T + I++ ++
Sbjct: 200 RAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVV 259
Query: 244 FDTDP-----------------W----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPW 282
+ P W P+ A DL+ +ML +P+RRI+ Q L HP+
Sbjct: 260 MFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPY 319
Query: 283 L 283
Sbjct: 320 F 320
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 33/181 (18%)
Query: 133 IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY 192
I+ ++V H GV+HRDL P N I DN + + DF A V +Y
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGN---ILLADNNDITICDFNLAREDTADANKTHYVTHRWY 199
Query: 193 IAPEVLRRRYG--KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ-------GEID 243
APE++ + G K +D+WSAG ++ + + F T + I++ ++
Sbjct: 200 RAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVV 259
Query: 244 FDTDP-----------------W----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPW 282
+ P W P+ A DL+ +ML +P+RRI+ Q L HP+
Sbjct: 260 MFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPY 319
Query: 283 L 283
Sbjct: 320 F 320
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 111/256 (43%), Gaps = 33/256 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDM---IRREIQIRLYLSGQP 84
LG+G FG ++ T N T R A K++ P+ L E + +R E ++LY
Sbjct: 23 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY----- 76
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATV--LRAIVNAVNVCHS 142
VV E +++V E G L D + + R V I + +
Sbjct: 77 AVV-------SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER 129
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPE-VL 198
M +HRDL+ N I +N + KV DFG A L E+ + + G+ F + APE L
Sbjct: 130 MNYVHRDLRAAN---ILVGENLVCKVADFGLARLIEDNE-WTARQGAKFPIKWTAPEAAL 185
Query: 199 RRRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
R+ + D+WS G++L L + G P+ + D + +G + P +
Sbjct: 186 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 242
Query: 258 DLVRRMLTKDPKRRIT 273
DL+ + K+P+ R T
Sbjct: 243 DLMCQCWRKEPEERPT 258
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 114/260 (43%), Gaps = 31/260 (11%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LG GQFGV L + A K I + ++E++ + E Q + LS P +V+F
Sbjct: 16 LGSGQFGVVKL-GKWKGQYDVAVKMIKEG---SMSEDEFFQ-EAQTMMKLS-HPKLVKFY 69
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM---- 146
E +++V E G L + + + G E + + +VC M +
Sbjct: 70 GVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPS-----QLLEMCYDVCEGMAFLESHQ 124
Query: 147 --HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPEVLRR- 200
HRDL N + RD +KV+DFG + Q Y VG+ F + APEV
Sbjct: 125 FIHRDLAARN-CLVDRD--LCVKVSDFGMTRYVLDDQ-YVSSVGTKFPVKWSAPEVFHYF 180
Query: 201 RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS-TAKD 258
+Y + D+W+ G++++ + S G P+ T + QG + P ++S T
Sbjct: 181 KYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYR----PHLASDTIYQ 236
Query: 259 LVRRMLTKDPKRRITAAQVL 278
++ + P++R T Q+L
Sbjct: 237 IMYSCWHELPEKRPTFQQLL 256
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 102/236 (43%), Gaps = 51/236 (21%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQI------- 76
+Y ++GRG +G YL + + N+ A K + + + L + I REI I
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFE-DLIDCKRILREITILNRLKSD 87
Query: 77 ---RLY-LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA 132
RL+ L ++++F Y +V+E+ + DL + +E+ T+L
Sbjct: 88 YIIRLHDLIIPEDLLKFDELY-------IVLEIADS-DLKKLFKTPIFLTEQHVKTILYN 139
Query: 133 IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF---EEGQVYRDI--- 186
++ H G++HRDLKP N +++D +K+ DFG A ++ + D+
Sbjct: 140 LLLGEKFIHESGIIHRDLKPAN-CLLNQD--CSVKICDFGLARTINSDKDIHIVNDLEEK 196
Query: 187 --------------------VGSGFYIAPE--VLRRRYGKEIDIWSAGVILYILLS 220
V + +Y APE +L+ Y IDIWS G I LL+
Sbjct: 197 EENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLN 252
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ SIS DL+ ML + ++RIT + L HP+L++
Sbjct: 336 YSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKD 372
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 114/284 (40%), Gaps = 27/284 (9%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LGRG +GV + + A K I + + E + ++ I P V F
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRI--RATVNSQEQKRLLXDLDISXRTVDCPFTVTFY 99
Query: 91 STYEDETAVHVVMELCEGG--DLFDRIIAKGYNSERDA-ATVLRAIVNAVNVCHS-MGVM 146
E V + EL + + ++I KG D + +IV A+ HS + V+
Sbjct: 100 GALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVI 159
Query: 147 HRDLKPENFSFISRDDNAL--LKVTDFG-SALLFEEGQVYRDI-VGSGFYIAPEVL---- 198
HRD+KP N NAL +K DFG S L ++ V +DI G Y APE +
Sbjct: 160 HRDVKPSNVLI-----NALGQVKXCDFGISGYLVDD--VAKDIDAGCKPYXAPERINPEL 212
Query: 199 -RRRYGKEIDIWSAGVILYILLSGVPPF--WAETKKGTYDAILQGEIDFDTDPWPSISST 255
++ Y + DIWS G+ L P+ W + + + D S+
Sbjct: 213 NQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD---KFSAE 269
Query: 256 AKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRM 299
D + L K+ K R T ++ +HP+ D + +++
Sbjct: 270 FVDFTSQCLKKNSKERPTYPELXQHPFFTLHESKGTDVASFVKL 313
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 110/259 (42%), Gaps = 29/259 (11%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE---NDMIRREIQIRLYLSGQPNVV 87
LG GQ+G Y + A K++ K+ M + E + +EI+ PN+V
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 77
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVL----RAIVNAVNVCHSM 143
+ E ++++E G+L D + + N + A VL I +A+
Sbjct: 78 QLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPEVLR- 199
+HRDL N +N L+KV DFG + L G Y G+ F + APE L
Sbjct: 136 NFIHRDLAARN---CLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAY 191
Query: 200 RRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
++ + D+W+ GV+L+ I G+ P+ Y+ + E D+ + +
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYE 248
Query: 259 LVRRMLTKDPKRRITAAQV 277
L+R +P R + A++
Sbjct: 249 LMRACWQWNPSDRPSFAEI 267
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 121/273 (44%), Gaps = 49/273 (17%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA----ENDMIRR--EIQIRLYL 80
+ + +G+G FG+ + R KS+ + L E +MI + E Q +++
Sbjct: 23 YEKQIGKGGFGLVH------KGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 81 SG---QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
PN+V+ + +VME GDL+ R++ K + + + LR +++
Sbjct: 77 MSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIK--WSVKLRLMLDIA 132
Query: 138 NVCHSM-----GVMHRDLKPENFSFISRDDNALL--KVTDFGSALLFEEGQVYRDIVGSG 190
M ++HRDL+ N S D+NA + KV DFG++ + ++G+
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ--QSVHSVSGLLGNF 190
Query: 191 FYIAPEVL---RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDF--- 244
++APE + Y ++ D +S +ILY +L+G +G +D G+I F
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTG---------EGPFDEYSYGKIKFINM 241
Query: 245 --DTDPWPSISSTAKDLVRRML----TKDPKRR 271
+ P+I +R ++ + DPK+R
Sbjct: 242 IREEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 314 KVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEA--V 371
K + E L +EE LKE F +DTD +GT+++DEL+ GL +VGS L E ++K LM+A +
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70
Query: 372 KNSSTLE 378
S T++
Sbjct: 71 DKSGTID 77
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 34/70 (48%)
Query: 380 LCENLPTKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQYMEAGDIDG 439
+ E L +E L E F+ +DTDNS T+T SE+ M+A DID
Sbjct: 13 MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDK 72
Query: 440 NGNIDSIEFV 449
+G ID EF+
Sbjct: 73 SGTIDYGEFI 82
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 110/256 (42%), Gaps = 33/256 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDM---IRREIQIRLYLSGQP 84
LG+G FG ++ T N T R A K++ P+ L E + +R E ++LY
Sbjct: 16 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY----- 69
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA--IVNAVNVCHS 142
VV E + +V E G L D + + R V A I + +
Sbjct: 70 AVV-------SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 122
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPE-VL 198
M +HRDL+ N I +N + KV DFG A L E+ + G+ F + APE L
Sbjct: 123 MNYVHRDLRAAN---ILVGENLVCKVADFGLARLIEDNEXTAR-QGAKFPIKWTAPEAAL 178
Query: 199 RRRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
R+ + D+WS G++L L + G P+ + D + +G + P +
Sbjct: 179 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 235
Query: 258 DLVRRMLTKDPKRRIT 273
DL+ + K+P+ R T
Sbjct: 236 DLMCQCWRKEPEERPT 251
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 120/273 (43%), Gaps = 49/273 (17%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA----ENDMIRR--EIQIRLYL 80
+ + +G+G FG+ + R KS+ + L E +MI + E Q +++
Sbjct: 23 YEKQIGKGGFGLVH------KGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 81 SG---QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
PN+V+ + +VME GDL+ R++ K + + + LR +++
Sbjct: 77 MSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIK--WSVKLRLMLDIA 132
Query: 138 NVCHSM-----GVMHRDLKPENFSFISRDDNALL--KVTDFGSALLFEEGQVYRDIVGSG 190
M ++HRDL+ N S D+NA + KV DFG L + ++G+
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG--LSQQSVHSVSGLLGNF 190
Query: 191 FYIAPEVL---RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDF--- 244
++APE + Y ++ D +S +ILY +L+G +G +D G+I F
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTG---------EGPFDEYSYGKIKFINM 241
Query: 245 --DTDPWPSISSTAKDLVRRML----TKDPKRR 271
+ P+I +R ++ + DPK+R
Sbjct: 242 IREEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 110/259 (42%), Gaps = 29/259 (11%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE---NDMIRREIQIRLYLSGQPNVV 87
LG GQ+G Y + A K++ K+ M + E + +EI+ PN+V
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 70
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVL----RAIVNAVNVCHSM 143
+ E ++++E G+L D + + N + +A VL I +A+
Sbjct: 71 QLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPEVLR- 199
+HRDL N +N L+KV DFG + L G G+ F + APE L
Sbjct: 129 NFIHRDLAARN---CLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAY 184
Query: 200 RRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
++ + D+W+ GV+L+ I G+ P+ Y+ + E D+ + +
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELL---EKDYRMERPEGCPEKVYE 241
Query: 259 LVRRMLTKDPKRRITAAQV 277
L+R +P R + A++
Sbjct: 242 LMRACWQWNPSDRPSFAEI 260
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 105/254 (41%), Gaps = 32/254 (12%)
Query: 31 LGRGQFGVSYLCTENSTN-RPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89
+ G G YL + + N RP K + M R+ + P++V+
Sbjct: 88 IAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVV---HPSIVQI 144
Query: 90 KSTYED-----ETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSM 143
+ E + ++VME GG R +KG +A L I+ A++ HS+
Sbjct: 145 FNFVEHTDRHGDPVGYIVMEYV-GGQSLKR--SKGQKLPVAEAIAYLLEILPALSYLHSI 201
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE-GQVYRDIVGSGFYIAPEVLRRRY 202
G+++ DLKPEN LK+ D G+ G +Y G+ + APE++R
Sbjct: 202 GLVYNDLKPENIMLTEEQ----LKLIDLGAVSRINSFGYLY----GTPGFQAPEIVRTGP 253
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
DI++ G L L +P T+ G Y L + DP + L+RR
Sbjct: 254 TVATDIYTVGRTLAALTLDLP-----TRNGRYVDGLP-----EDDPVLKTYDSYGRLLRR 303
Query: 263 MLTKDPKRRITAAQ 276
+ DP++R T A+
Sbjct: 304 AIDPDPRQRFTTAE 317
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 12/166 (7%)
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGG--DLFDRIIAKGYNSERDAATVLRAIVNAVNVC 140
PN++ + +V E E G D F R G + +LR + +
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRYL 167
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG----FYIAPE 196
+G +HRDL N + D N + KV+DFG + + E+ G + APE
Sbjct: 168 SDLGYVHRDLAARN---VLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPE 224
Query: 197 VLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQG 240
+ R + D+WS GV+++ +L G P+W T + ++ +G
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG 270
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RR 201
+ ++H DLKPEN + +A+ K+ DFGS+ + GQ + S FY +PEVL
Sbjct: 178 LSIIHCDLKPENILLCNPKRSAI-KIVDFGSSC--QLGQRIYQXIQSRFYRSPEVLLGMP 234
Query: 202 YGKEIDIWSAGVILYILLSGVPPF 225
Y ID+WS G IL + +G P F
Sbjct: 235 YDLAIDMWSLGCILVEMHTGEPLF 258
Score = 31.6 bits (70), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288
KDL+ RML DPK RI L+H + +++ +
Sbjct: 350 KDLILRMLDYDPKTRIQPYYALQHSFFKKTAD 381
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL-RRR 201
+ ++H DLKPEN + +A+ K+ DFGS+ + GQ + S FY +PEVL
Sbjct: 159 LSIIHCDLKPENILLCNPKRSAI-KIVDFGSSC--QLGQRIYQXIQSRFYRSPEVLLGMP 215
Query: 202 YGKEIDIWSAGVILYILLSGVPPF 225
Y ID+WS G IL + +G P F
Sbjct: 216 YDLAIDMWSLGCILVEMHTGEPLF 239
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTS 294
KDL+ RML DPK RI L+H + +++ + +TS
Sbjct: 331 KDLILRMLDYDPKTRIQPYYALQHSFFKKTADEGTNTS 368
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 120/273 (43%), Gaps = 49/273 (17%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA----ENDMIRR--EIQIRLYL 80
+ + +G+G FG+ + R KS+ + L E +MI + E Q +++
Sbjct: 23 YEKQIGKGGFGLVH------KGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 81 SG---QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
PN+V+ + +VME GDL+ R++ K + + + LR +++
Sbjct: 77 MSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIK--WSVKLRLMLDIA 132
Query: 138 NVCHSM-----GVMHRDLKPENFSFISRDDNALL--KVTDFGSALLFEEGQVYRDIVGSG 190
M ++HRDL+ N S D+NA + KV DF +L + ++G+
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF--SLSQQSVHSVSGLLGNF 190
Query: 191 FYIAPEVL---RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDF--- 244
++APE + Y ++ D +S +ILY +L+G +G +D G+I F
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTG---------EGPFDEYSYGKIKFINM 241
Query: 245 --DTDPWPSISSTAKDLVRRML----TKDPKRR 271
+ P+I +R ++ + DPK+R
Sbjct: 242 IREEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 105/289 (36%), Gaps = 51/289 (17%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK---PKMRLAENDMIRREIQIRLYLSGQ 83
FG+ LG G FG T + A ++A K P L E + + E+++ YL
Sbjct: 43 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 102
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRA--------- 132
N+V V+ E C GDL + + K + + + ++
Sbjct: 103 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 162
Query: 133 -------IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD 185
+ + S +HRDL N I + K+ DFG A RD
Sbjct: 163 LLSFSYQVAKGMAFLASKNCIHRDLAARN---ILLTHGRITKICDFGLA---------RD 210
Query: 186 IVGSGFYI------------APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWA-ETK 230
I Y+ APE + Y E D+WS G+ L+ L S G P+
Sbjct: 211 IKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 270
Query: 231 KGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279
Y I +G + P + D+++ DP +R T Q+++
Sbjct: 271 SKFYKMIKEGFRMLSPEHAP---AEMYDIMKTCWDADPLKRPTFKQIVQ 316
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 87/230 (37%), Gaps = 43/230 (18%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA---ENDMIRREIQIRLYLSGQ 83
FG+ LG G FG T + A +A K A E + + E++I +L
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRI--------------IAKGYNSERDAATV 129
N+V V V+ E C GDL + + IA S RD
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGS 189
+ + S +HRD+ N + + + K+ DFG A RDI+
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARN---VLLTNGHVAKIGDFGLA---------RDIMND 217
Query: 190 GFYI------------APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 225
YI APE + Y + D+WS G++L+ + S G+ P+
Sbjct: 218 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 105/289 (36%), Gaps = 51/289 (17%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK---PKMRLAENDMIRREIQIRLYLSGQ 83
FG+ LG G FG T + A ++A K P L E + + E+++ YL
Sbjct: 50 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRA--------- 132
N+V V+ E C GDL + + K + + + ++
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 133 -------IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD 185
+ + S +HRDL N I + K+ DFG A RD
Sbjct: 170 LLSFSYQVAKGMAFLASKNCIHRDLAARN---ILLTHGRITKICDFGLA---------RD 217
Query: 186 IVGSGFYI------------APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWA-ETK 230
I Y+ APE + Y E D+WS G+ L+ L S G P+
Sbjct: 218 IKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 277
Query: 231 KGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279
Y I +G + P + D+++ DP +R T Q+++
Sbjct: 278 SKFYKMIKEGFRMLSPEHAP---AEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RR 201
+ ++H DLKPEN + A+ K+ DFGS+ + GQ + S FY +PEVL
Sbjct: 178 LSIIHCDLKPENILLCNPKRXAI-KIVDFGSSC--QLGQRIYQXIQSRFYRSPEVLLGMP 234
Query: 202 YGKEIDIWSAGVILYILLSGVPPF 225
Y ID+WS G IL + +G P F
Sbjct: 235 YDLAIDMWSLGCILVEMHTGEPLF 258
Score = 31.6 bits (70), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288
KDL+ RML DPK RI L+H + +++ +
Sbjct: 350 KDLILRMLDYDPKTRIQPYYALQHSFFKKTAD 381
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 105/289 (36%), Gaps = 51/289 (17%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK---PKMRLAENDMIRREIQIRLYLSGQ 83
FG+ LG G FG T + A ++A K P L E + + E+++ YL
Sbjct: 45 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 104
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRA--------- 132
N+V V+ E C GDL + + K + + + ++
Sbjct: 105 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 164
Query: 133 -------IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD 185
+ + S +HRDL N I + K+ DFG A RD
Sbjct: 165 LLSFSYQVAKGMAFLASKNCIHRDLAARN---ILLTHGRITKICDFGLA---------RD 212
Query: 186 IVGSGFYI------------APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWA-ETK 230
I Y+ APE + Y E D+WS G+ L+ L S G P+
Sbjct: 213 IKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 272
Query: 231 KGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279
Y I +G + P + D+++ DP +R T Q+++
Sbjct: 273 SKFYKMIKEGFRMLSPEHAP---AEMYDIMKTCWDADPLKRPTFKQIVQ 318
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 107/281 (38%), Gaps = 35/281 (12%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK---PKMRLAENDMIRREIQIRLYLSGQ 83
FG+ LG G FG T + A ++A K P L E + + E+++ YL
Sbjct: 50 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRA--------- 132
N+V V+ E C GDL + + K + + + ++
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 133 -------IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD 185
+ + S +HRDL N I + K+ DFG A + Y
Sbjct: 170 LLSFSYQVAKGMAFLASKNCIHRDLAARN---ILLTHGRITKICDFGLARHIKNDSNYV- 225
Query: 186 IVGSGF----YIAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWA-ETKKGTYDAIL 238
+ G+ ++APE + Y E D+WS G+ L+ L S G P+ Y I
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 285
Query: 239 QGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279
+G + P + D+++ DP +R T Q+++
Sbjct: 286 EGFRMLSPEHAP---AEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 105/289 (36%), Gaps = 51/289 (17%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK---PKMRLAENDMIRREIQIRLYLSGQ 83
FG+ LG G FG T + A ++A K P L E + + E+++ YL
Sbjct: 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 86
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRA--------- 132
N+V V+ E C GDL + + K + + + ++
Sbjct: 87 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146
Query: 133 -------IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD 185
+ + S +HRDL N I + K+ DFG A RD
Sbjct: 147 LLSFSYQVAKGMAFLASKNCIHRDLAARN---ILLTHGRITKICDFGLA---------RD 194
Query: 186 IVGSGFYI------------APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWA-ETK 230
I Y+ APE + Y E D+WS G+ L+ L S G P+
Sbjct: 195 IKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 254
Query: 231 KGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279
Y I +G + P + D+++ DP +R T Q+++
Sbjct: 255 SKFYKMIKEGFRMLSPEHAP---AEMYDIMKTCWDADPLKRPTFKQIVQ 300
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 109/259 (42%), Gaps = 29/259 (11%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE---NDMIRREIQIRLYLSGQPNVV 87
LG GQ+G Y + A K++ K+ M + E + +EI+ PN+V
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 73
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVL----RAIVNAVNVCHSM 143
+ E ++++E G+L D + + N + A VL I +A+
Sbjct: 74 QLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK 131
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPEVLR- 199
+HRDL N +N L+KV DFG + L G G+ F + APE L
Sbjct: 132 NFIHRDLAARN---CLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAY 187
Query: 200 RRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
++ + D+W+ GV+L+ I G+ P+ Y+ + E D+ + +
Sbjct: 188 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYE 244
Query: 259 LVRRMLTKDPKRRITAAQV 277
L+R +P R + A++
Sbjct: 245 LMRACWQWNPSDRPSFAEI 263
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 12/166 (7%)
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGG--DLFDRIIAKGYNSERDAATVLRAIVNAVNVC 140
PN++ + +V E E G D F R G + +LR + +
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRYL 167
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG----FYIAPE 196
+G +HRDL N + D N + KV+DFG + + E+ G + APE
Sbjct: 168 SDLGYVHRDLAARN---VLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPE 224
Query: 197 VLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQG 240
+ R + D+WS GV+++ +L G P+W T + ++ +G
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG 270
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 87/230 (37%), Gaps = 43/230 (18%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA---ENDMIRREIQIRLYLSGQ 83
FG+ LG G FG T + A +A K A E + + E++I +L
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRI--------------IAKGYNSERDAATV 129
N+V V V+ E C GDL + + IA S RD
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHF 169
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGS 189
+ + S +HRD+ N + + + K+ DFG A RDI+
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARN---VLLTNGHVAKIGDFGLA---------RDIMND 217
Query: 190 GFYI------------APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 225
YI APE + Y + D+WS G++L+ + S G+ P+
Sbjct: 218 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 46/225 (20%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM--IRREIQIRLYLSGQPN 85
G ++G+G+FG Y R + +I R E+ + +RE+ + + N
Sbjct: 38 GELIGKGRFGQVY------HGRWHGEVAIRLIDIERDNEDQLKAFKREV-MAYRQTRHEN 90
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVL---------RAIVNA 136
VV F + ++ LC+G L Y+ RDA VL + IV
Sbjct: 91 VVLFMGACMSPPHLAIITSLCKGRTL--------YSVVRDAKIVLDVNKTRQIAQEIVKG 142
Query: 137 VNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG----SALLFEEGQVYRDIVGSGF- 191
+ H+ G++H+DLK +N + DN + +TDFG S +L + + + +G+
Sbjct: 143 MGYLHAKGILHKDLKSKNVFY----DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWL 198
Query: 192 -YIAPEVLRR----------RYGKEIDIWSAGVILYILLSGVPPF 225
++APE++R+ + K D+++ G I Y L + PF
Sbjct: 199 CHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF 243
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 103/235 (43%), Gaps = 27/235 (11%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACK--SIAKKPKMRLAENDMIRREIQIRLYLSG 82
+ GR +G G FG YL T TN A K ++ K L E+ + R I +G
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYR----ILQGGTG 64
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGG--DLFDRIIAKGYNSERDAATVLRAIVNAVNVC 140
PNV F E + V +VM+L DLF+ K S + + ++N V
Sbjct: 65 IPNVRWF--GVEGDYNV-LVMDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVEFV 119
Query: 141 HSMGVMHRDLKPENFSF-ISRDDNALLKVTDFGSALLFEEGQVY--------RDIVGSGF 191
HS +HRD+KP+NF + R N + + DFG A + + + +++ G+
Sbjct: 120 HSKSFLHRDIKPDNFLMGLGRRANQVY-IIDFGLAKKYRDTSTHQHIPYRENKNLTGTAR 178
Query: 192 YIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFW---AETKKGTYDAILQGEI 242
Y + L + D+ S G +L L G P+ A TKK Y+ I + ++
Sbjct: 179 YASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV 233
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 88/221 (39%), Gaps = 34/221 (15%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACK---SIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
R +G G FG LC + YA K +I K + E D++++ I+ N
Sbjct: 41 RKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKK---IQNDDINNNN 97
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSER--DAATVLRAIVNAVNVCHSM 143
+V++ + + ++ E G L++ I YN D I+ A+N M
Sbjct: 98 IVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM 156
Query: 144 GVMHRDLKPENFSF----------------------ISRDDNALLKVTDFGSALLFEEGQ 181
+ H DLKPEN I R + +K+ DFG A +
Sbjct: 157 SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATF--KSD 214
Query: 182 VYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSG 221
+ I+ + Y APEV L + D+WS G +L L +G
Sbjct: 215 YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG 255
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 110/269 (40%), Gaps = 28/269 (10%)
Query: 31 LGRGQFGVSYLCTENSTNRPYA-C----KSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
+GRG F Y + T A C + + K + R E + +Q PN
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQ-------HPN 86
Query: 86 VVEF----KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
+V F +ST + + + +V EL G L + + + R I+ + H
Sbjct: 87 IVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLH 146
Query: 142 SMG--VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR 199
+ ++HRDLK +N FI+ ++ K+ D G A L + + ++G+ + APE
Sbjct: 147 TRTPPIIHRDLKCDNI-FITGPTGSV-KIGDLGLATL-KRASFAKAVIGTPEFXAPEXYE 203
Query: 200 RRYGKEIDIWSAG-VILYILLSGVPPFWAETKKGTYDAILQG--EIDFDTDPWPSISSTA 256
+Y + +D+++ G L S P + Y + G FD P +
Sbjct: 204 EKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEV---- 259
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
K+++ + ++ R + +L H + +E
Sbjct: 260 KEIIEGCIRQNKDERYSIKDLLNHAFFQE 288
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 128/337 (37%), Gaps = 74/337 (21%)
Query: 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREI 74
G+ Y+D Y R LG G F +L + N A K + A D I+
Sbjct: 13 GEPYKDA--RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQ 70
Query: 75 QI------RLYLSGQPNVVEFKSTYEDE--TAVHVVMELCEGGDLFDRIIAKGYNSERDA 126
++ + G ++++ + + VHVVM G+ +I K Y
Sbjct: 71 RVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKK-YEHRGIP 129
Query: 127 ATVLRAIVN----AVNVCHS-MGVMHRDLKPEN--FSFISRDDNAL-LKVTDFGSALLFE 178
++ I ++ H G++H D+KPEN + +N + +K+ D G+A ++
Sbjct: 130 LIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD 189
Query: 179 EGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSG---------------- 221
E Y + + + Y +PEV L +G DIWS +++ L++G
Sbjct: 190 EH--YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247
Query: 222 ------------VPPFWAETKKGT--------------------YDAILQGEIDFDTDPW 249
+P + K T + +L + F D
Sbjct: 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEA 307
Query: 250 PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286
IS D + ML DP++R A ++ HPWL+++
Sbjct: 308 KEIS----DFLSPMLQLDPRKRADAGGLVNHPWLKDT 340
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 88/232 (37%), Gaps = 45/232 (19%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA---ENDMIRREIQIRLYLSGQ 83
FG+ LG G FG T + A +A K A E + + E++I +L
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-------GYN---------SERDAA 127
N+V V V+ E C GDL + + K YN S RD
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 128 TVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIV 187
+ + S +HRD+ N + + + K+ DFG A RDI+
Sbjct: 170 HFSSQVAQGMAFLASKNCIHRDVAARN---VLLTNGHVAKIGDFGLA---------RDIM 217
Query: 188 GSGFYI------------APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 225
YI APE + Y + D+WS G++L+ + S G+ P+
Sbjct: 218 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 269
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 38/229 (16%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK---PKMRLAENDMIRREIQIRLYLSGQ 83
G+ LGRG FG ++ C+++A K +E+ + E++I +++
Sbjct: 33 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 84 PNVVEF-KSTYEDETAVHVVMELCEGGDLFDRIIAK-----GYNSE-----RDAATVLRA 132
NVV + + + V++E C+ G+L + +K Y +D T+
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHL 152
Query: 133 IVNAVNVCHSM------GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD- 185
I + V M +HRDL N I + ++K+ DFG A +Y+D
Sbjct: 153 ICYSFQVAKGMEFLASRKCIHRDLAARN---ILLSEKNVVKICDFGLAR-----DIYKDP 204
Query: 186 -IVGSG------FYIAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 225
V G ++APE + R Y + D+WS GV+L+ + S G P+
Sbjct: 205 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 253
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 36/218 (16%)
Query: 29 RMLGRGQFGVSYL--CTENSTNR-PYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
R++G+G FGV Y + + NR A KS+++ +M+ E +R + +R PN
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEA-FLREGLLMRGL--NHPN 83
Query: 86 VVEFKST-YEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSM 143
V+ E HV++ GDL I + N + +D + + +
Sbjct: 84 VLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ 143
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY----------- 192
+HRDL N D++ +KV DFG A RDI+ +Y
Sbjct: 144 KFVHRDLAARNCML---DESFTVKVADFGLA---------RDILDREYYSVQQHRHARLP 191
Query: 193 ---IAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPF 225
A E L+ R+ + D+WS GV+L+ LL+ G PP+
Sbjct: 192 VKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPY 229
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 128/337 (37%), Gaps = 74/337 (21%)
Query: 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREI 74
G+ Y+D Y R LG G F +L + N A K + A D I+
Sbjct: 13 GEPYKDA--RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQ 70
Query: 75 QI------RLYLSGQPNVVEFKSTYEDE--TAVHVVMELCEGGDLFDRIIAKGYNSERDA 126
++ + G ++++ + + VHVVM G+ +I K Y
Sbjct: 71 RVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKK-YEHRGIP 129
Query: 127 ATVLRAIVN----AVNVCHS-MGVMHRDLKPEN--FSFISRDDNAL-LKVTDFGSALLFE 178
++ I ++ H G++H D+KPEN + +N + +K+ D G+A ++
Sbjct: 130 LIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD 189
Query: 179 EGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSG---------------- 221
E Y + + + Y +PEV L +G DIWS +++ L++G
Sbjct: 190 EH--YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247
Query: 222 ------------VPPFWAETKKGT--------------------YDAILQGEIDFDTDPW 249
+P + K T + +L + F D
Sbjct: 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEA 307
Query: 250 PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286
IS D + ML DP++R A ++ HPWL+++
Sbjct: 308 KEIS----DFLSPMLQLDPRKRADAGGLVNHPWLKDT 340
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 12/164 (7%)
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHS 142
N++ + + ++ E E G L D+ + + G S +LR I + +
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGAL-DKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN 165
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG----FYIAPEVL 198
M +HRDL N I + N + KV+DFG + + E+ G + APE +
Sbjct: 166 MNYVHRDLAARN---ILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 199 R-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQG 240
R++ D+WS G++++ ++ G P+W + AI G
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG 266
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 34/226 (15%)
Query: 27 FGRMLGRGQFGVSYLCT-----ENSTNRPYACKSIAKKPKMRLAENDM--IRREIQIRLY 79
G+ LG G FG L ++ NR K K K E D+ + E+++
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNR--VTKVAVKMLKSDATEKDLSDLISEMEMMKM 89
Query: 80 LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-------GYN---------SE 123
+ N++ + ++V++E G+L + + A+ YN S
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSS 149
Query: 124 RDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY 183
+D + + + S +HRDL N + +DN ++K+ DFG A Y
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNV--LVTEDN-VMKIADFGLARDIHHIDYY 206
Query: 184 RDIVGSGF---YIAPEVLRRR-YGKEIDIWSAGVILY--ILLSGVP 223
+ ++APE L R Y + D+WS GV+L+ L G P
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 34/226 (15%)
Query: 27 FGRMLGRGQFGVSYLCT-----ENSTNRPYACKSIAKKPKMRLAENDM--IRREIQIRLY 79
G+ LG G FG L ++ NR K K K E D+ + E+++
Sbjct: 21 LGKPLGEGAFGQVVLAEAIGLDKDKPNR--VTKVAVKMLKSDATEKDLSDLISEMEMMKM 78
Query: 80 LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-------GYN---------SE 123
+ N++ + ++V++E G+L + + A+ YN S
Sbjct: 79 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 138
Query: 124 RDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY 183
+D + + + S +HRDL N + +DN ++K+ DFG A Y
Sbjct: 139 KDLVSCAYQVARGMEYLASKKCIHRDLAARNV--LVTEDN-VMKIADFGLARDIHHIDYY 195
Query: 184 RDIVGSGF---YIAPEVLRRR-YGKEIDIWSAGVILY--ILLSGVP 223
+ ++APE L R Y + D+WS GV+L+ L G P
Sbjct: 196 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 241
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 33/226 (14%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK---PKMRLAENDMIRREIQIRLYLSGQ 83
G+ LGRG FG ++ C+++A K +E+ + E++I +++
Sbjct: 32 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 91
Query: 84 PNVVEF-KSTYEDETAVHVVMELCEGGDLFDRIIAK-----GYNSE----RDAATVLRAI 133
NVV + + + V++E C+ G+L + +K Y + +D T+ I
Sbjct: 92 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLI 151
Query: 134 VNAVNVCHSM------GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIV 187
+ V M +HRDL N I + ++K+ DFG A + D V
Sbjct: 152 CYSFQVAKGMEFLASRKCIHRDLAARN---ILLSEKNVVKICDFGLARDIXKDP---DXV 205
Query: 188 GSG------FYIAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 225
G ++APE + R Y + D+WS GV+L+ + S G P+
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 34/226 (15%)
Query: 27 FGRMLGRGQFGVSYLCT-----ENSTNRPYACKSIAKKPKMRLAENDM--IRREIQIRLY 79
G+ LG G FG L ++ NR K K K E D+ + E+++
Sbjct: 25 LGKPLGEGAFGQVVLAEAIGLDKDKPNR--VTKVAVKMLKSDATEKDLSDLISEMEMMKM 82
Query: 80 LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-------GYN---------SE 123
+ N++ + ++V++E G+L + + A+ YN S
Sbjct: 83 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 142
Query: 124 RDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY 183
+D + + + S +HRDL N + +DN ++K+ DFG A Y
Sbjct: 143 KDLVSCAYQVARGMEYLASKKCIHRDLAARNV--LVTEDN-VMKIADFGLARDIHHIDYY 199
Query: 184 RDIVGSGF---YIAPEVLRRR-YGKEIDIWSAGVILY--ILLSGVP 223
+ ++APE L R Y + D+WS GV+L+ L G P
Sbjct: 200 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 245
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 34/226 (15%)
Query: 27 FGRMLGRGQFGVSYLCT-----ENSTNRPYACKSIAKKPKMRLAENDM--IRREIQIRLY 79
G+ LG G FG L ++ NR K K K E D+ + E+++
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNR--VTKVAVKMLKSDATEKDLSDLISEMEMMKM 89
Query: 80 LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-------GYN---------SE 123
+ N++ + ++V++E G+L + + A+ YN S
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 149
Query: 124 RDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY 183
+D + + + S +HRDL N + +DN ++K+ DFG A Y
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNV--LVTEDN-VMKIADFGLARDIHHIDYY 206
Query: 184 RDIVGSGF---YIAPEVLRRR-YGKEIDIWSAGVILY--ILLSGVP 223
+ ++APE L R Y + D+WS GV+L+ L G P
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 34/226 (15%)
Query: 27 FGRMLGRGQFGVSYLCT-----ENSTNRPYACKSIAKKPKMRLAENDM--IRREIQIRLY 79
G+ LG G FG L ++ NR K K K E D+ + E+++
Sbjct: 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNR--VTKVAVKMLKSDATEKDLSDLISEMEMMKM 130
Query: 80 LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-------GYN---------SE 123
+ N++ + ++V++E G+L + + A+ YN S
Sbjct: 131 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 190
Query: 124 RDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY 183
+D + + + S +HRDL N + +DN ++K+ DFG A Y
Sbjct: 191 KDLVSCAYQVARGMEYLASKKCIHRDLAARNV--LVTEDN-VMKIADFGLARDIHHIDYY 247
Query: 184 RDIVGSGF---YIAPEVLRRR-YGKEIDIWSAGVILY--ILLSGVP 223
+ ++APE L R Y + D+WS GV+L+ L G P
Sbjct: 248 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 293
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 38/229 (16%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK---PKMRLAENDMIRREIQIRLYLSGQ 83
G+ LGRG FG ++ C+++A K +E+ + E++I +++
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 84 PNVVEF-KSTYEDETAVHVVMELCEGGDLFDRIIAK----------GYNSERDAATVLRA 132
NVV + + + V++E C+ G+L + +K + +D T+
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 133 IVNAVNVCHSM------GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD- 185
I + V M +HRDL N I + ++K+ DFG A +Y+D
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARN---ILLSEKNVVKICDFGLA-----RDIYKDP 202
Query: 186 -IVGSG------FYIAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 225
V G ++APE + R Y + D+WS GV+L+ + S G P+
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 34/226 (15%)
Query: 27 FGRMLGRGQFGVSYLCT-----ENSTNRPYACKSIAKKPKMRLAENDM--IRREIQIRLY 79
G+ LG G FG L ++ NR K K K E D+ + E+++
Sbjct: 24 LGKPLGEGAFGQVVLAEAIGLDKDKPNR--VTKVAVKMLKSDATEKDLSDLISEMEMMKM 81
Query: 80 LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-------GYN---------SE 123
+ N++ + ++V++E G+L + + A+ YN S
Sbjct: 82 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 141
Query: 124 RDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY 183
+D + + + S +HRDL N + +DN ++K+ DFG A Y
Sbjct: 142 KDLVSCAYQVARGMEYLASKKCIHRDLAARNV--LVTEDN-VMKIADFGLARDIHHIDYY 198
Query: 184 RDIVGSGF---YIAPEVLRRR-YGKEIDIWSAGVILY--ILLSGVP 223
+ ++APE L R Y + D+WS GV+L+ L G P
Sbjct: 199 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 244
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 38/229 (16%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK---PKMRLAENDMIRREIQIRLYLSGQ 83
G+ LGRG FG ++ C+++A K +E+ + E++I +++
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 84 PNVVEF-KSTYEDETAVHVVMELCEGGDLFDRIIAK----------GYNSERDAATVLRA 132
NVV + + + V++E C+ G+L + +K + +D T+
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 133 IVNAVNVCHSM------GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD- 185
I + V M +HRDL N I + ++K+ DFG A +Y+D
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARN---ILLSEKNVVKICDFGLA-----RDIYKDP 202
Query: 186 -IVGSG------FYIAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 225
V G ++APE + R Y + D+WS GV+L+ + S G P+
Sbjct: 203 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 38/229 (16%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK---PKMRLAENDMIRREIQIRLYLSGQ 83
G+ LGRG FG ++ C+++A K +E+ + E++I +++
Sbjct: 68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 127
Query: 84 PNVVEF-KSTYEDETAVHVVMELCEGGDLFDRIIAK----------GYNSERDAATVLRA 132
NVV + + + V++E C+ G+L + +K + +D T+
Sbjct: 128 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 187
Query: 133 IVNAVNVCHSM------GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD- 185
I + V M +HRDL N I + ++K+ DFG A +Y+D
Sbjct: 188 ICYSFQVAKGMEFLASRKCIHRDLAARN---ILLSEKNVVKICDFGLAR-----DIYKDP 239
Query: 186 -IVGSG------FYIAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 225
V G ++APE + R Y + D+WS GV+L+ + S G P+
Sbjct: 240 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 288
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 34/226 (15%)
Query: 27 FGRMLGRGQFGVSYLCT-----ENSTNRPYACKSIAKKPKMRLAENDM--IRREIQIRLY 79
G+ LG G FG L ++ NR K K K E D+ + E+++
Sbjct: 17 LGKPLGEGAFGQVVLAEAIGLDKDKPNR--VTKVAVKMLKSDATEKDLSDLISEMEMMKM 74
Query: 80 LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-------GYN---------SE 123
+ N++ + ++V++E G+L + + A+ YN S
Sbjct: 75 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 134
Query: 124 RDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY 183
+D + + + S +HRDL N + +DN ++K+ DFG A Y
Sbjct: 135 KDLVSCAYQVARGMEYLASKKCIHRDLAARNV--LVTEDN-VMKIADFGLARDIHHIDYY 191
Query: 184 RDIVGSGF---YIAPEVLRRR-YGKEIDIWSAGVILY--ILLSGVP 223
+ ++APE L R Y + D+WS GV+L+ L G P
Sbjct: 192 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 237
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 34/226 (15%)
Query: 27 FGRMLGRGQFGVSYLCT-----ENSTNRPYACKSIAKKPKMRLAENDM--IRREIQIRLY 79
G+ LG G FG L ++ NR K K K E D+ + E+++
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNR--VTKVAVKMLKSDATEKDLSDLISEMEMMKM 89
Query: 80 LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-------GYN---------SE 123
+ N++ + ++V++E G+L + + A+ YN S
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 149
Query: 124 RDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY 183
+D + + + S +HRDL N + +DN ++K+ DFG A Y
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNV--LVTEDN-VMKIADFGLARDIHHIDYY 206
Query: 184 RDIVGSGF---YIAPEVLRRR-YGKEIDIWSAGVILY--ILLSGVP 223
+ ++APE L R Y + D+WS GV+L+ L G P
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 36/227 (15%)
Query: 27 FGRMLGRGQFGV-----SYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS 81
G+ LGRG FG ++ + +T R A K + K +E+ + E++I +++
Sbjct: 33 LGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKML--KEGATHSEHRALMSELKILIHIG 90
Query: 82 GQPNVVEF-KSTYEDETAVHVVMELCEGGDLFDRIIAK-----GYNSE---RDAATVLRA 132
NVV + + + V++E C+ G+L + +K Y E +D T+
Sbjct: 91 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHL 150
Query: 133 IVNAVNVCHSMGVM------HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI 186
I + V M + HRDL N I + ++K+ DFG A + D
Sbjct: 151 IXYSFQVAKGMEFLASRKXIHRDLAARN---ILLSEKNVVKICDFGLARDIXKDP---DX 204
Query: 187 VGSG------FYIAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 225
V G ++APE + R Y + D+WS GV+L+ + S G P+
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 38/229 (16%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK---PKMRLAENDMIRREIQIRLYLSGQ 83
G+ LGRG FG ++ C+++A K +E+ + E++I +++
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 84 PNVVEF-KSTYEDETAVHVVMELCEGGDLFDRIIAK----------GYNSERDAATVLRA 132
NVV + + + V+ E C+ G+L + +K + +D T+
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 133 IVNAVNVCHSM------GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD- 185
I + V M +HRDL N I + ++K+ DFG A +Y+D
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARN---ILLSEKNVVKICDFGLA-----RDIYKDP 193
Query: 186 -IVGSG------FYIAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 225
V G ++APE + R Y + D+WS GV+L+ + S G P+
Sbjct: 194 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 97/222 (43%), Gaps = 22/222 (9%)
Query: 10 RDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM 69
+DP + +E+ L Y LG+G FG LC + K+ + +
Sbjct: 2 QDPTI---FEERHLKYI--SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR 56
Query: 70 -IRREIQIRLYLSGQPNVVEFK--STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA 126
+REIQI L +V+++ S ++ +VME G L D + + + + DA
Sbjct: 57 DFQREIQILKALHSD-FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDA 113
Query: 127 ATVL---RAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY 183
+ +L I + S +HRDL N I + A +K+ DFG A L + Y
Sbjct: 114 SRLLLYSSQICKGMEYLGSRRCVHRDLAARN---ILVESEAHVKIADFGLAKLLPLDKDY 170
Query: 184 RDIVGSG----FYIAPEVLRRR-YGKEIDIWSAGVILYILLS 220
+ G F+ APE L + ++ D+WS GV+LY L +
Sbjct: 171 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 38/229 (16%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK---PKMRLAENDMIRREIQIRLYLSGQ 83
G+ LGRG FG ++ C+++A K +E+ + E++I +++
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 84 PNVVEF-KSTYEDETAVHVVMELCEGGDLFDRIIAK----------GYNSERDAATVLRA 132
NVV + + + V+ E C+ G+L + +K + +D T+
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 133 IVNAVNVCHSM------GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD- 185
I + V M +HRDL N I + ++K+ DFG A +Y+D
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARN---ILLSEKNVVKICDFGLA-----RDIYKDP 193
Query: 186 -IVGSG------FYIAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 225
V G ++APE + R Y + D+WS GV+L+ + S G P+
Sbjct: 194 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 97/222 (43%), Gaps = 22/222 (9%)
Query: 10 RDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM 69
+DP + +E+ L Y LG+G FG LC + K+ + +
Sbjct: 3 QDPTI---FEERHLKYI--SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR 57
Query: 70 -IRREIQIRLYLSGQPNVVEFK--STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA 126
+REIQI L +V+++ S ++ +VME G L D + + + + DA
Sbjct: 58 DFQREIQILKALHSD-FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDA 114
Query: 127 ATVL---RAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY 183
+ +L I + S +HRDL N I + A +K+ DFG A L + Y
Sbjct: 115 SRLLLYSSQICKGMEYLGSRRCVHRDLAARN---ILVESEAHVKIADFGLAKLLPLDKDY 171
Query: 184 RDIVGSG----FYIAPEVLRRR-YGKEIDIWSAGVILYILLS 220
+ G F+ APE L + ++ D+WS GV+LY L +
Sbjct: 172 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 101/227 (44%), Gaps = 38/227 (16%)
Query: 27 FGRMLGRGQFGV-----SYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS 81
G+ LGRG FG ++ + +T R A K + K +E+ + E++I +++
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKML--KEGATHSEHRALMSELKILIHIG 88
Query: 82 GQPNVVEF-KSTYEDETAVHVVMELCEGGDLFDRIIAKG------YNSERDAATVLRAIV 134
NVV + + + V++E C+ G+L + +K + +D T+ I
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIC 148
Query: 135 NAVNVCHSMGVM------HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD--I 186
+ V M + HRDL N I + ++K+ DFG A +Y+D
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARN---ILLSEKNVVKICDFGLA-----RDIYKDPDY 200
Query: 187 VGSG------FYIAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 225
V G ++APE + R Y + D+WS GV+L+ + S G P+
Sbjct: 201 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 247
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 101/227 (44%), Gaps = 38/227 (16%)
Query: 27 FGRMLGRGQFGV-----SYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS 81
G+ LGRG FG ++ + +T R A K + K +E+ + E++I +++
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKML--KEGATHSEHRALMSELKILIHIG 88
Query: 82 GQPNVVEF-KSTYEDETAVHVVMELCEGGDLFDRIIAKG------YNSERDAATVLRAIV 134
NVV + + + V++E C+ G+L + +K + +D T+ I
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIX 148
Query: 135 NAVNVCHSMGVM------HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD--I 186
+ V M + HRDL N I + ++K+ DFG A +Y+D
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARN---ILLSEKNVVKIXDFGLA-----RDIYKDPDY 200
Query: 187 VGSG------FYIAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 225
V G ++APE + R Y + D+WS GV+L+ + S G P+
Sbjct: 201 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 247
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 97/222 (43%), Gaps = 22/222 (9%)
Query: 10 RDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM 69
+DP + +E+ L Y LG+G FG LC + K+ + +
Sbjct: 15 QDPTI---FEERHLKYI--SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR 69
Query: 70 -IRREIQIRLYLSGQPNVVEFK--STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA 126
+REIQI L +V+++ S ++ +VME G L D + + + + DA
Sbjct: 70 DFQREIQILKALHSD-FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDA 126
Query: 127 ATVL---RAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY 183
+ +L I + S +HRDL N I + A +K+ DFG A L + Y
Sbjct: 127 SRLLLYSSQICKGMEYLGSRRCVHRDLAARN---ILVESEAHVKIADFGLAKLLPLDKDY 183
Query: 184 RDIVGSG----FYIAPEVLRRR-YGKEIDIWSAGVILYILLS 220
+ G F+ APE L + ++ D+WS GV+LY L +
Sbjct: 184 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 16/220 (7%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
F + LG GQFGV + R +I + ++E++ I E ++ + LS + +
Sbjct: 8 FLKELGTGQFGV----VKYGKWRGQYDVAIKMIKEGSMSEDEFIE-EAKVMMNLSHE-KL 61
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSE-RDAATVLRAIVNAVNVCHSMGV 145
V+ + + ++ E G L + + + + + + + + A+ S
Sbjct: 62 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF 121
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPEVLR-RR 201
+HRDL N +D ++KV+DFG + + + Y VGS F + PEVL +
Sbjct: 122 LHRDLAARN---CLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSK 177
Query: 202 YGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
+ + DIW+ GV+++ + S G P+ T T + I QG
Sbjct: 178 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 217
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 16/220 (7%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
F + LG GQFGV + R +I + ++E++ I E ++ + LS + +
Sbjct: 12 FLKELGTGQFGV----VKYGKWRGQYDVAIKMIKEGSMSEDEFIE-EAKVMMNLSHE-KL 65
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSE-RDAATVLRAIVNAVNVCHSMGV 145
V+ + + ++ E G L + + + + + + + + A+ S
Sbjct: 66 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF 125
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPEVL-RRR 201
+HRDL N +D ++KV+DFG + + + Y VGS F + PEVL +
Sbjct: 126 LHRDLAARN---CLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSK 181
Query: 202 YGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
+ + DIW+ GV+++ + S G P+ T T + I QG
Sbjct: 182 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 221
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 34/227 (14%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK---PKMRLAENDMIRREIQIRLYLSGQ 83
G+ LGRG FG ++ C+++A K +E+ + E++I +++
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 84 PNVVEF-KSTYEDETAVHVVMELCEGGDLFDRIIAK----------GYNSERDAATVLRA 132
NVV + + + V++E C+ G+L + +K + +D T+
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 133 IVNAVNVCHSM------GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI 186
I + V M +HRDL N I + ++K+ DFG A + D
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARN---ILLSEKNVVKICDFGLARDIXKDP---DX 204
Query: 187 VGSG------FYIAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 225
V G ++APE + R Y + D+WS GV+L+ + S G P+
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 25/214 (11%)
Query: 24 HYFFGRMLGRGQFGVSYLCT----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLY 79
H F + LG+G FG +C +++T A K + + L + REI+I
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKS 70
Query: 80 LSGQPNVVEFKSTY--EDETAVHVVMELCEGGDLFDRIIAKGYNSER-DAATVLR---AI 133
L N+V++K + ++ME G L D + A ++ER D +L+ I
Sbjct: 71 LQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQA---HAERIDHIKLLQYTSQI 126
Query: 134 VNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG--- 190
+ + +HRDL N I ++ +K+ DFG + + + + G
Sbjct: 127 CKGMEYLGTKRYIHRDLATRN---ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 191 -FYIAPEVL-RRRYGKEIDIWSAGVILYILLSGV 222
F+ APE L ++ D+WS GV+LY L + +
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 87/226 (38%), Gaps = 39/226 (17%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA---ENDMIRREIQIRLYLSGQ 83
FG+ LG G FG T + A +A K A E + + E++I +L
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK---------GYNSE-RDAATVLRAI 133
N+V V V+ E C GDL + + K G E RD +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 169
Query: 134 VNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI 193
+ S +HRD+ N + + + K+ DFG A RDI+ YI
Sbjct: 170 AQGMAFLASKNCIHRDVAARN---VLLTNGHVAKIGDFGLA---------RDIMNDSNYI 217
Query: 194 ------------APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 225
APE + Y + D+WS G++L+ + S G+ P+
Sbjct: 218 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 263
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 87/226 (38%), Gaps = 39/226 (17%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA---ENDMIRREIQIRLYLSGQ 83
FG+ LG G FG T + A +A K A E + + E++I +L
Sbjct: 42 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 101
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK---------GYNSE-RDAATVLRAI 133
N+V V V+ E C GDL + + K G E RD +
Sbjct: 102 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 161
Query: 134 VNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI 193
+ S +HRD+ N + + + K+ DFG A RDI+ YI
Sbjct: 162 AQGMAFLASKNCIHRDVAARN---VLLTNGHVAKIGDFGLA---------RDIMNDSNYI 209
Query: 194 ------------APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 225
APE + Y + D+WS G++L+ + S G+ P+
Sbjct: 210 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 255
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 16/220 (7%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
F + LG GQFGV + R +I + ++E++ I E ++ + LS + +
Sbjct: 13 FLKELGTGQFGV----VKYGKWRGQYDVAIKMIKEGSMSEDEFIE-EAKVMMNLSHE-KL 66
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSE-RDAATVLRAIVNAVNVCHSMGV 145
V+ + + ++ E G L + + + + + + + + A+ S
Sbjct: 67 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF 126
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPEVL-RRR 201
+HRDL N +D ++KV+DFG + + + Y VGS F + PEVL +
Sbjct: 127 LHRDLAARN---CLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSK 182
Query: 202 YGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
+ + DIW+ GV+++ + S G P+ T T + I QG
Sbjct: 183 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 222
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 23/213 (10%)
Query: 24 HYFFGRMLGRGQFGVSYLCT----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLY 79
H F R LG+G FG +C +++T A K + + L + REI+I
Sbjct: 14 HLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKS 70
Query: 80 LSGQPNVVEFKSTY--EDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLR---AIV 134
L N+V++K + ++ME G L R + + D +L+ I
Sbjct: 71 LQ-HDNIVKYKGVCYSAGRRNLKLIMEFLPYGSL--REYLQKHKERIDHIKLLQYTSQIC 127
Query: 135 NAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG---- 190
+ + +HRDL N I ++ +K+ DFG + + + + G
Sbjct: 128 KGMEYLGTKRYIHRDLATRN---ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
Query: 191 FYIAPEVL-RRRYGKEIDIWSAGVILYILLSGV 222
F+ APE L ++ D+WS GV+LY L + +
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 105/239 (43%), Gaps = 35/239 (14%)
Query: 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYL 80
V +HY GR +G G FGV + T N + +A K + R ++ +R E + L
Sbjct: 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNN-----QQVAIKFEPRRSDAPQLRDEYRTYKLL 62
Query: 81 SGQ---PNVVEFKSTYEDETAVHVVMELCEGG----DLFDRIIAKGYNSERDAATVLRAI 133
+G PNV F + +H V+ + G DL D + + + S + A + +
Sbjct: 63 AGCTGIPNVYYF-----GQEGLHNVLVIDLLGPSLEDLLD-LCGRKF-SVKTVAMAAKQM 115
Query: 134 VNAVNVCHSMGVMHRDLKPENFSFISRDDNA---LLKVTDFGSALLFEEGQV-----YR- 184
+ V H +++RD+KP+NF I R ++ ++ V DFG + + YR
Sbjct: 116 LARVQSIHEKSLVYRDIKPDNF-LIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYRE 174
Query: 185 --DIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFW---AETKKGTYDAI 237
++ G+ Y++ L R + D+ + G + L G P+ A T K Y+ I
Sbjct: 175 KKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERI 233
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 105/239 (43%), Gaps = 35/239 (14%)
Query: 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYL 80
V +HY GR +G G FGV + T N + +A K + R ++ +R E + L
Sbjct: 7 VGVHYKVGRRIGEGSFGVIFEGTNLLNN-----QQVAIKFEPRRSDAPQLRDEYRTYKLL 61
Query: 81 SGQ---PNVVEFKSTYEDETAVHVVMELCEGG----DLFDRIIAKGYNSERDAATVLRAI 133
+G PNV F + +H V+ + G DL D + + + S + A + +
Sbjct: 62 AGCTGIPNVYYF-----GQEGLHNVLVIDLLGPSLEDLLD-LCGRKF-SVKTVAMAAKQM 114
Query: 134 VNAVNVCHSMGVMHRDLKPENFSFISRDDNA---LLKVTDFGSALLFEEGQV-----YR- 184
+ V H +++RD+KP+NF I R ++ ++ V DFG + + YR
Sbjct: 115 LARVQSIHEKSLVYRDIKPDNF-LIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYRE 173
Query: 185 --DIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFW---AETKKGTYDAI 237
++ G+ Y++ L R + D+ + G + L G P+ A T K Y+ I
Sbjct: 174 KKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERI 232
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 34/227 (14%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK---PKMRLAENDMIRREIQIRLYLSGQ 83
G+ LGRG FG ++ C+++A K +E+ + E++I +++
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 84 PNVVEF-KSTYEDETAVHVVMELCEGGDLFDRIIAK----------GYNSERDAATVLRA 132
NVV + + + V++E C+ G+L + +K + +D T+
Sbjct: 82 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 133 IVNAVNVCHSM------GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI 186
I + V M +HRDL N I + ++K+ DFG A + D
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARN---ILLSEKNVVKICDFGLARDIXKDP---DX 195
Query: 187 VGSG------FYIAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 225
V G ++APE + R Y + D+WS GV+L+ + S G P+
Sbjct: 196 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 29/216 (13%)
Query: 24 HYFFGRMLGRGQFGVSYLCT----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLY 79
H F + LG+G FG +C +++T A K + + L + REI+I
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKS 67
Query: 80 LSGQPNVVEFKSTY--EDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L N+V++K + ++ME G L D + ++ ++ +
Sbjct: 68 LQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTS 121
Query: 138 NVCHSMGVM------HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG- 190
+C M + HRDL N I ++ +K+ DFG + + + + + G
Sbjct: 122 QICKGMEYLGTKRYIHRDLATRN---ILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGE 178
Query: 191 ---FYIAPEVL-RRRYGKEIDIWSAGVILYILLSGV 222
F+ APE L ++ D+WS GV+LY L + +
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 29/216 (13%)
Query: 24 HYFFGRMLGRGQFGVSYLCT----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLY 79
H F + LG+G FG +C +++T A K + + L + REI+I
Sbjct: 12 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKS 68
Query: 80 LSGQPNVVEFKSTY--EDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L N+V++K + ++ME G L D + ++ ++ +
Sbjct: 69 LQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTS 122
Query: 138 NVCHSMGVM------HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG- 190
+C M + HR+L N I ++ +K+ DFG + + + Y + G
Sbjct: 123 QICKGMEYLGTKRYIHRNLATRN---ILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGE 179
Query: 191 ---FYIAPEVL-RRRYGKEIDIWSAGVILYILLSGV 222
F+ APE L ++ D+WS GV+LY L + +
Sbjct: 180 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 215
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 34/154 (22%)
Query: 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFI 158
++VV+E+ + D Y +E T+L ++ V HS G++HRDLKP N +
Sbjct: 132 LYVVLEIADS-DFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPAN-CLV 189
Query: 159 SRDDNALLKVTDFGSALLF---EEG----------------------QVYRDIVG---SG 190
++D +KV DFG A E G + R + G +
Sbjct: 190 NQD--CSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTR 247
Query: 191 FYIAPE--VLRRRYGKEIDIWSAGVILYILLSGV 222
+Y APE +L+ Y + ID+WS G I LL+ +
Sbjct: 248 WYRAPELILLQENYTEAIDVWSIGCIFAELLNMI 281
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTS----VILRMKQFRR 304
+P+ S+ A L++RML +P +RIT + L HP+ +E A +T+ V L +
Sbjct: 366 FPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIAEVETNATEKVRLPFNDWMN 425
Query: 305 MN--KLKKLTIKVIVEYLPD 322
M+ +L+ +K I Y P+
Sbjct: 426 MDEPQLRYAFVKEIQRYHPE 445
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 96/232 (41%), Gaps = 35/232 (15%)
Query: 14 LGKAYEDV------MLHYFFGRMLGRGQFGVSYLCT----ENSTNRPYACKSIAKKPKMR 63
+G A+ED H F + LG+G FG +C +++T A K + +
Sbjct: 26 MGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH 85
Query: 64 LAENDMIRREIQIRLYLSGQPNVVEFKSTY--EDETAVHVVMELCEGGDLFDRIIAKGYN 121
L + REI+I L N+V++K + ++ME G L D +
Sbjct: 86 LRD---FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----Q 136
Query: 122 SERDAATVLRAIVNAVNVCHSMGVM------HRDLKPENFSFISRDDNALLKVTDFGSAL 175
++ ++ + +C M + HRDL N I ++ +K+ DFG
Sbjct: 137 KHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN---ILVENENRVKIGDFGLTK 193
Query: 176 LFEEGQVYRDIVGSG----FYIAPEVL-RRRYGKEIDIWSAGVILYILLSGV 222
+ + + + G F+ APE L ++ D+WS GV+LY L + +
Sbjct: 194 VLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 245
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 16/220 (7%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
F + LG GQFGV + R +I + ++E++ I E ++ + LS + +
Sbjct: 19 FLKELGTGQFGV----VKYGKWRGQYDVAIKMIKEGSMSEDEFIE-EAKVMMNLSHE-KL 72
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSE-RDAATVLRAIVNAVNVCHSMGV 145
V+ + + ++ E G L + + + + + + + + A+ S
Sbjct: 73 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF 132
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPEVL-RRR 201
+HRDL N +D ++KV+DFG + + + Y VGS F + PEVL +
Sbjct: 133 LHRDLAARN---CLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSK 188
Query: 202 YGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
+ + DIW+ GV+++ + S G P+ T T + I QG
Sbjct: 189 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 228
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 16/220 (7%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
F + LG GQFGV + R +I + ++E++ I E ++ + LS + +
Sbjct: 28 FLKELGTGQFGV----VKYGKWRGQYDVAIKMIKEGSMSEDEFIE-EAKVMMNLSHE-KL 81
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSE-RDAATVLRAIVNAVNVCHSMGV 145
V+ + + ++ E G L + + + + + + + + A+ S
Sbjct: 82 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF 141
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPEVL-RRR 201
+HRDL N +D ++KV+DFG + + + Y VGS F + PEVL +
Sbjct: 142 LHRDLAARN---CLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSK 197
Query: 202 YGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
+ + DIW+ GV+++ + S G P+ T T + I QG
Sbjct: 198 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 34/227 (14%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK---PKMRLAENDMIRREIQIRLYLSGQ 83
G+ LGRG FG ++ C+++A K +E+ + E++I +++
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 84 PNVVEF-KSTYEDETAVHVVMELCEGGDLFDRIIAK----------GYNSERDAATVLRA 132
NVV + + + V+ E C+ G+L + +K + +D T+
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 133 IVNAVNVCHSM------GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI 186
I + V M +HRDL N I + ++K+ DFG A + D
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARN---ILLSEKNVVKICDFGLARDIXKDP---DX 195
Query: 187 VGSG------FYIAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 225
V G ++APE + R Y + D+WS GV+L+ + S G P+
Sbjct: 196 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 89/239 (37%), Gaps = 52/239 (21%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA---ENDMIRREIQIRLYLSGQ 83
FG+ LG G FG T + A +A K A E + + E++I +L
Sbjct: 35 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 94
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRI-----------IAKGYNSE--------- 123
N+V V V+ E C GDL + + +A G + E
Sbjct: 95 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP 154
Query: 124 ---RDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180
RD + + S +HRD+ N + + + K+ DFG A
Sbjct: 155 LELRDLLHFSSQVAQGMAFLASKNCIHRDVAARN---VLLTNGHVAKIGDFGLA------ 205
Query: 181 QVYRDIVGSGFYI------------APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 225
RDI+ YI APE + Y + D+WS G++L+ + S G+ P+
Sbjct: 206 ---RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 261
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 34/238 (14%)
Query: 2 GCSVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCT----ENSTNRPYACKSIA 57
G S + RDP +E+ H F + LG+G FG +C +++T A K +
Sbjct: 1 GSSGAFEDRDPT---QFEE--RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ 55
Query: 58 KKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTY--EDETAVHVVMELCEGGDLFDRI 115
+ L + REI+I L N+V++K + ++ME G L D +
Sbjct: 56 HSTEEHLRD---FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 111
Query: 116 IAKGYNSERDAATVLRAIVNAVNVCHSMGVM------HRDLKPENFSFISRDDNALLKVT 169
++ ++ + +C M + HRDL N I ++ +K+
Sbjct: 112 -----QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN---ILVENENRVKIG 163
Query: 170 DFGSALLFEEGQVYRDIVGSG----FYIAPEVL-RRRYGKEIDIWSAGVILYILLSGV 222
DFG + + + + G F+ APE L ++ D+WS GV+LY L + +
Sbjct: 164 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 221
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 96/241 (39%), Gaps = 56/241 (23%)
Query: 27 FGRMLGRGQFG-----VSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS 81
FG++LG G FG +Y ++ + A K + K K +E + + E+++ L
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKML--KEKADSSEREALMSELKMMTQLG 106
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK---------GYNSER-------- 124
N+V ++++ E C GDL + + +K Y +++
Sbjct: 107 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166
Query: 125 DAATVLRAIVNAVNVCHSM------GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178
+ T + A V M +HRDL N + ++K+ DFG A
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARN---VLVTHGKVVKICDFGLA---- 219
Query: 179 EGQVYRDIVGSGFYI------------APEVLRRR-YGKEIDIWSAGVILYILLS-GVPP 224
RDI+ Y+ APE L Y + D+WS G++L+ + S GV P
Sbjct: 220 -----RDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 274
Query: 225 F 225
+
Sbjct: 275 Y 275
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 98/246 (39%), Gaps = 45/246 (18%)
Query: 29 RMLGRGQFGVSYL--CTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
R LG G FG +L C S + ++ LA +RE ++ L + ++
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHE-HI 79
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNS-------ERDAA---------TVL 130
V+F D + +V E + GDL + A G ++ R A +
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 131 RAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG 190
I + + S +HRDL N N L+K+ DFG + RD+ +
Sbjct: 140 SQIASGMVYLASQHFVHRDLATRNCLV---GANLLVKIGDFGMS---------RDVYSTD 187
Query: 191 FY------------IAPE-VLRRRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDA 236
+Y + PE ++ R++ E D+WS GVIL+ I G P++ + +
Sbjct: 188 YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIEC 247
Query: 237 ILQGEI 242
I QG +
Sbjct: 248 ITQGRV 253
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 22/185 (11%)
Query: 58 KKPKMRLAENDMIRREIQIRLYLS---GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDR 114
++ + N+M+ +Q L++S PN+V +++T+ + + VV G D
Sbjct: 58 RRINLEACSNEMVTF-LQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDL 116
Query: 115 IIAK---GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDF 171
I G N E A +L+ ++ A++ H MG +HR +K + IS D L +
Sbjct: 117 ICTHFMDGMN-ELAIAYILQGVLKALDYIHHMGYVHRSVKASHI-LISVDGKVYL--SGL 172
Query: 172 GSAL-LFEEGQVYRDI-------VGSGFYIAPEVLRRR---YGKEIDIWSAGVILYILLS 220
S L + GQ R + V +++PEVL++ Y + DI+S G+ L +
Sbjct: 173 RSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELAN 232
Query: 221 GVPPF 225
G PF
Sbjct: 233 GHVPF 237
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 29/216 (13%)
Query: 24 HYFFGRMLGRGQFGVSYLCT----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLY 79
H F + LG+G FG +C +++T A K + + L + REI+I
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKS 67
Query: 80 LSGQPNVVEFKSTY--EDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L N+V++K + ++ME G L D + ++ ++ +
Sbjct: 68 LQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTS 121
Query: 138 NVCHSMGVM------HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG- 190
+C M + HRDL N I ++ +K+ DFG + + + + G
Sbjct: 122 QICKGMEYLGTKRYIHRDLATRN---ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 178
Query: 191 ---FYIAPEVL-RRRYGKEIDIWSAGVILYILLSGV 222
F+ APE L ++ D+WS GV+LY L + +
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 29/216 (13%)
Query: 24 HYFFGRMLGRGQFGVSYLCT----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLY 79
H F + LG+G FG +C +++T A K + + L + REI+I
Sbjct: 16 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKS 72
Query: 80 LSGQPNVVEFKSTY--EDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L N+V++K + ++ME G L D + ++ ++ +
Sbjct: 73 LQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTS 126
Query: 138 NVCHSMGVM------HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG- 190
+C M + HRDL N I ++ +K+ DFG + + + + G
Sbjct: 127 QICKGMEYLGTKRYIHRDLATRN---ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 183
Query: 191 ---FYIAPEVL-RRRYGKEIDIWSAGVILYILLSGV 222
F+ APE L ++ D+WS GV+LY L + +
Sbjct: 184 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 219
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 29/216 (13%)
Query: 24 HYFFGRMLGRGQFGVSYLCT----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLY 79
H F + LG+G FG +C +++T A K + + L + REI+I
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKS 70
Query: 80 LSGQPNVVEFKSTY--EDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L N+V++K + ++ME G L D + ++ ++ +
Sbjct: 71 LQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTS 124
Query: 138 NVCHSMGVM------HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG- 190
+C M + HRDL N I ++ +K+ DFG + + + + G
Sbjct: 125 QICKGMEYLGTKRYIHRDLATRN---ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 181
Query: 191 ---FYIAPEVL-RRRYGKEIDIWSAGVILYILLSGV 222
F+ APE L ++ D+WS GV+LY L + +
Sbjct: 182 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 29/216 (13%)
Query: 24 HYFFGRMLGRGQFGVSYLCT----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLY 79
H F + LG+G FG +C +++T A K + + L + REI+I
Sbjct: 10 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKS 66
Query: 80 LSGQPNVVEFKSTY--EDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L N+V++K + ++ME G L D + ++ ++ +
Sbjct: 67 LQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTS 120
Query: 138 NVCHSMGVM------HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG- 190
+C M + HRDL N I ++ +K+ DFG + + + + G
Sbjct: 121 QICKGMEYLGTKRYIHRDLATRN---ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 177
Query: 191 ---FYIAPEVL-RRRYGKEIDIWSAGVILYILLSGV 222
F+ APE L ++ D+WS GV+LY L + +
Sbjct: 178 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 213
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 22/185 (11%)
Query: 58 KKPKMRLAENDMIRREIQIRLYLS---GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDR 114
++ + N+M+ +Q L++S PN+V +++T+ + + VV G D
Sbjct: 42 RRINLEACSNEMVTF-LQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDL 100
Query: 115 IIAK---GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDF 171
I G N E A +L+ ++ A++ H MG +HR +K + IS D L +
Sbjct: 101 ICTHFMDGMN-ELAIAYILQGVLKALDYIHHMGYVHRSVKASHI-LISVDGKVYL--SGL 156
Query: 172 GSAL-LFEEGQVYRDI-------VGSGFYIAPEVLRRR---YGKEIDIWSAGVILYILLS 220
S L + GQ R + V +++PEVL++ Y + DI+S G+ L +
Sbjct: 157 RSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELAN 216
Query: 221 GVPPF 225
G PF
Sbjct: 217 GHVPF 221
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 29/216 (13%)
Query: 24 HYFFGRMLGRGQFGVSYLCT----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLY 79
H F + LG+G FG +C +++T A K + + L + REI+I
Sbjct: 9 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKS 65
Query: 80 LSGQPNVVEFKSTY--EDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L N+V++K + ++ME G L D + ++ ++ +
Sbjct: 66 LQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTS 119
Query: 138 NVCHSMGVM------HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG- 190
+C M + HRDL N I ++ +K+ DFG + + + + G
Sbjct: 120 QICKGMEYLGTKRYIHRDLATRN---ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 176
Query: 191 ---FYIAPEVL-RRRYGKEIDIWSAGVILYILLSGV 222
F+ APE L ++ D+WS GV+LY L + +
Sbjct: 177 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 29/216 (13%)
Query: 24 HYFFGRMLGRGQFGVSYLCT----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLY 79
H F + LG+G FG +C +++T A K + + L + REI+I
Sbjct: 17 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKS 73
Query: 80 LSGQPNVVEFKSTY--EDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L N+V++K + ++ME G L D + ++ ++ +
Sbjct: 74 LQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTS 127
Query: 138 NVCHSMGVM------HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG- 190
+C M + HRDL N I ++ +K+ DFG + + + + G
Sbjct: 128 QICKGMEYLGTKRYIHRDLATRN---ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 184
Query: 191 ---FYIAPEVL-RRRYGKEIDIWSAGVILYILLSGV 222
F+ APE L ++ D+WS GV+LY L + +
Sbjct: 185 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 220
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 29/216 (13%)
Query: 24 HYFFGRMLGRGQFGVSYLCT----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLY 79
H F + LG+G FG +C +++T A K + + L + REI+I
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKS 67
Query: 80 LSGQPNVVEFKSTY--EDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L N+V++K + ++ME G L D + ++ ++ +
Sbjct: 68 LQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTS 121
Query: 138 NVCHSMGVM------HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG- 190
+C M + HRDL N I ++ +K+ DFG + + + + G
Sbjct: 122 QICKGMEYLGTKRYIHRDLATRN---ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 178
Query: 191 ---FYIAPEVL-RRRYGKEIDIWSAGVILYILLSGV 222
F+ APE L ++ D+WS GV+LY L + +
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 29/216 (13%)
Query: 24 HYFFGRMLGRGQFGVSYLCT----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLY 79
H F + LG+G FG +C +++T A K + + L + REI+I
Sbjct: 15 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKS 71
Query: 80 LSGQPNVVEFKSTY--EDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L N+V++K + ++ME G L D + ++ ++ +
Sbjct: 72 LQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTS 125
Query: 138 NVCHSMGVM------HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG- 190
+C M + HRDL N I ++ +K+ DFG + + + + G
Sbjct: 126 QICKGMEYLGTKRYIHRDLATRN---ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 182
Query: 191 ---FYIAPEVL-RRRYGKEIDIWSAGVILYILLSGV 222
F+ APE L ++ D+WS GV+LY L + +
Sbjct: 183 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 218
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 29/216 (13%)
Query: 24 HYFFGRMLGRGQFGVSYLCT----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLY 79
H F + LG+G FG +C +++T A K + + L + REI+I
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKS 85
Query: 80 LSGQPNVVEFKSTY--EDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L N+V++K + ++ME G L D + ++ ++ +
Sbjct: 86 LQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTS 139
Query: 138 NVCHSMGVM------HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG- 190
+C M + HRDL N I ++ +K+ DFG + + + + G
Sbjct: 140 QICKGMEYLGTKRYIHRDLATRN---ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 196
Query: 191 ---FYIAPEVL-RRRYGKEIDIWSAGVILYILLSGV 222
F+ APE L ++ D+WS GV+LY L + +
Sbjct: 197 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 232
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 89/214 (41%), Gaps = 29/214 (13%)
Query: 24 HYFFGRMLGRGQFGVSYLCT----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLY 79
H F + LG+G FG +C +++T A K + + L + REI+I
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKS 85
Query: 80 LSGQPNVVEFKSTY--EDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
L N+V++K + ++ME G L D + ++ ++ +
Sbjct: 86 LQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTS 139
Query: 138 NVCHSMGVM------HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG- 190
+C M + HRDL N I ++ +K+ DFG + + + + G
Sbjct: 140 QICKGMEYLGTKRYIHRDLATRN---ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 196
Query: 191 ---FYIAPEVL-RRRYGKEIDIWSAGVILYILLS 220
F+ APE L ++ D+WS GV+LY L +
Sbjct: 197 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 21/210 (10%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIR---REIQIRLYL 80
H + LG+G FG LC + K+ ++ + D R REIQI L
Sbjct: 8 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQ--LQHSGPDQQRDFQREIQILKAL 65
Query: 81 SGQPNVVEFK--STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVL---RAIVN 135
+V+++ S + +VME G L D + + + + DA+ +L I
Sbjct: 66 HSD-FIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICK 122
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF---EEGQVYRDIVGSG-F 191
+ S +HRDL N I + A +K+ DFG A L ++ V R+ S F
Sbjct: 123 GMEYLGSRRCVHRDLAARN---ILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIF 179
Query: 192 YIAPEVLRRR-YGKEIDIWSAGVILYILLS 220
+ APE L + ++ D+WS GV+LY L +
Sbjct: 180 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 98/235 (41%), Gaps = 37/235 (15%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
FG++ FG + + A K++ K + L E R E +R L PNV
Sbjct: 39 FGKVYKGHLFGPA----PGEQTQAVAIKTLKDKAEGPLREE--FRHEAMLRARLQ-HPNV 91
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSE----------------RDAATVL 130
V + + ++ C GDL + ++ + +S+ D ++
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 131 RAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE--GQVYRDIVG 188
I + S V+H+DL N + D +K++D G LF E Y ++G
Sbjct: 152 AQIAAGMEYLSSHHVVHKDLATRN---VLVYDKLNVKISDLG---LFREVYAADYYKLLG 205
Query: 189 SGF----YIAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAI 237
+ ++APE ++ ++ + DIWS GV+L+ + S G+ P+ + + + I
Sbjct: 206 NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMI 260
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 90/224 (40%), Gaps = 30/224 (13%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM---RLAENDM--IRREIQIRLYLS 81
G+ LG G FG + ++ +++ KM E D+ + E+++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-------GYNSER---------D 125
N++ + ++V++E G+L + + A+ Y+ R D
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD 185
+ + + S +HRDL N + +N ++K+ DFG A Y++
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARN---VLVTENNVMKIADFGLARDINNIDYYKN 215
Query: 186 IVGSGF---YIAPEVL-RRRYGKEIDIWSAGVILY--ILLSGVP 223
++APE L R Y + D+WS GV+++ L G P
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 28/207 (13%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ +G+G+FG L C + LAE ++ Q+R N+V+
Sbjct: 12 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVM---TQLR-----HSNLVQ 63
Query: 89 FKST-YEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM---- 143
E++ +++V E G L D + ++G S +L+ +++VC +M
Sbjct: 64 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKF---SLDVCEAMEYLE 119
Query: 144 --GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF-YIAPEVLR- 199
+HRDL N +S D+ A KV+DFG L +E +D + APE LR
Sbjct: 120 GNNFVHRDLAARNV-LVSEDNVA--KVSDFG---LTKEASSTQDTGKLPVKWTAPEALRE 173
Query: 200 RRYGKEIDIWSAGVILYILLS-GVPPF 225
+++ + D+WS G++L+ + S G P+
Sbjct: 174 KKFSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 25/202 (12%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG GQFG ++ T N N A K++ KP E+ + +I +L +V+
Sbjct: 15 KRLGNGQFGEVWMGTWNG-NTKVAIKTL--KPGTMSPESFLEEAQIMKKL---KHDKLVQ 68
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG---- 144
+ +E +++V E G L D + + E A + + A V M
Sbjct: 69 LYAVVSEE-PIYIVTEYMNKGSLLDFL----KDGEGRALKLPNLVDMAAQVAAGMAYIER 123
Query: 145 --VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPE-VL 198
+HRDL+ N I + + K+ DFG A L E+ + G+ F + APE L
Sbjct: 124 MNYIHRDLRSAN---ILVGNGLICKIADFGLARLIEDNEXTAR-QGAKFPIKWTAPEAAL 179
Query: 199 RRRYGKEIDIWSAGVILYILLS 220
R+ + D+WS G++L L++
Sbjct: 180 YGRFTIKSDVWSFGILLTELVT 201
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 28/207 (13%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ +G+G+FG L C + LAE ++ Q+R N+V+
Sbjct: 27 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVM---TQLR-----HSNLVQ 78
Query: 89 FKST-YEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM---- 143
E++ +++V E G L D + ++G S +L+ +++VC +M
Sbjct: 79 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKF---SLDVCEAMEYLE 134
Query: 144 --GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF-YIAPEVLR- 199
+HRDL N +S D+ A KV+DFG L +E +D + APE LR
Sbjct: 135 GNNFVHRDLAARNV-LVSEDNVA--KVSDFG---LTKEASSTQDTGKLPVKWTAPEALRE 188
Query: 200 RRYGKEIDIWSAGVILYILLS-GVPPF 225
+++ + D+WS G++L+ + S G P+
Sbjct: 189 KKFSTKSDVWSFGILLWEIYSFGRVPY 215
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 98/235 (41%), Gaps = 37/235 (15%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
FG++ FG + + A K++ K + L E R E +R L PNV
Sbjct: 22 FGKVYKGHLFGPA----PGEQTQAVAIKTLKDKAEGPLREE--FRHEAMLRARLQ-HPNV 74
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSE----------------RDAATVL 130
V + + ++ C GDL + ++ + +S+ D ++
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 131 RAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE--GQVYRDIVG 188
I + S V+H+DL N + D +K++D G LF E Y ++G
Sbjct: 135 AQIAAGMEYLSSHHVVHKDLATRN---VLVYDKLNVKISDLG---LFREVYAADYYKLLG 188
Query: 189 SGF----YIAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAI 237
+ ++APE ++ ++ + DIWS GV+L+ + S G+ P+ + + + I
Sbjct: 189 NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMI 243
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 9/143 (6%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST--- 376
L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 377 -----LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQ 430
L + + T ++++ E FR D D + ++ + EV++
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 390
Query: 431 YMEAGDIDGNGNIDSIEFVNLMT 453
+ DIDG+G ++ EFV +MT
Sbjct: 391 MIREADIDGDGQVNYEEFVQMMT 413
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 9/143 (6%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST--- 376
L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 377 -----LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQ 430
L + + T ++++ E FR D D + ++ + EV++
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 431 YMEAGDIDGNGNIDSIEFVNLMT 453
+ DIDG+G ++ EFV +MT
Sbjct: 425 MIREADIDGDGQVNYEEFVQMMT 447
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 9/143 (6%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST--- 376
L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 377 -----LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQ 430
L + + T ++++ E FR D D + ++ + EV++
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 431 YMEAGDIDGNGNIDSIEFVNLMT 453
+ DIDG+G ++ EFV +MT
Sbjct: 425 MIREADIDGDGQVNYEEFVQMMT 447
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 9/143 (6%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST--- 376
L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 306 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 365
Query: 377 -----LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQ 430
L + + T ++++ E FR D D + ++ + EV++
Sbjct: 366 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 425
Query: 431 YMEAGDIDGNGNIDSIEFVNLMT 453
+ DIDG+G ++ EFV +MT
Sbjct: 426 MIREADIDGDGQVNYEEFVQMMT 448
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 89/224 (39%), Gaps = 30/224 (13%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM---RLAENDM--IRREIQIRLYLS 81
G+ LG G FG + ++ +++ KM E D+ + E+++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-------GYNSER---------D 125
N++ + ++V++E G+L + + A+ Y+ R D
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD 185
+ + + S +HRDL N + +N ++K+ DFG A Y+
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARN---VLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 186 IVGSGF---YIAPEVL-RRRYGKEIDIWSAGVILY--ILLSGVP 223
++APE L R Y + D+WS GV+++ L G P
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 9/143 (6%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST--- 376
L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 377 -----LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQ 430
L + + T ++++ E FR D D + ++ + EV++
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 390
Query: 431 YMEAGDIDGNGNIDSIEFVNLMT 453
+ DIDG+G ++ EFV +MT
Sbjct: 391 MIREADIDGDGQVNYEEFVQMMT 413
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 9/143 (6%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST--- 376
L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 377 -----LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQ 430
L + + T ++++ E FR D D + ++ + EV++
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 431 YMEAGDIDGNGNIDSIEFVNLMT 453
+ DIDG+G ++ EFV +MT
Sbjct: 425 MIREADIDGDGQVNYEEFVQMMT 447
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 9/143 (6%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST--- 376
L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 268 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 327
Query: 377 -----LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQ 430
L + + T ++++ E FR D D + ++ + EV++
Sbjct: 328 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 387
Query: 431 YMEAGDIDGNGNIDSIEFVNLMT 453
+ DIDG+G ++ EFV +MT
Sbjct: 388 MIREADIDGDGQVNYEEFVQMMT 410
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 34/265 (12%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ +G+G+FG L C + LAE ++ Q+R N+V+
Sbjct: 199 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVM---TQLR-----HSNLVQ 250
Query: 89 FKST-YEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM---- 143
E++ +++V E G L D + ++G S +L+ +++VC +M
Sbjct: 251 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKF---SLDVCEAMEYLE 306
Query: 144 --GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF-YIAPEVLR- 199
+HRDL N +S D+ A KV+DFG L +E +D + APE LR
Sbjct: 307 GNNFVHRDLAARNV-LVSEDNVA--KVSDFG---LTKEASSTQDTGKLPVKWTAPEALRE 360
Query: 200 RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
+++ + D+WS G++L+ + S G P+ + D + + E + D D
Sbjct: 361 KKFSTKSDVWSFGILLWEIYSFGRVPY---PRIPLKDVVPRVEKGYKMDAPDGCPPAVYD 417
Query: 259 LVRRMLTKDPKRRITAAQV---LEH 280
+++ D R T Q+ LEH
Sbjct: 418 VMKNCWHLDAATRPTFLQLREQLEH 442
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 96/231 (41%), Gaps = 38/231 (16%)
Query: 73 EIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA 132
E+++ L PN++ E +++ +E G+L D + K E D A A
Sbjct: 75 ELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD-FLRKSRVLETDPAF---A 130
Query: 133 IVN--------------AVNVCHSMGVM------HRDLKPENFSFISRDDNALLKVTDFG 172
I N A +V M + HRDL N I +N + K+ DFG
Sbjct: 131 IANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARN---ILVGENYVAKIADFG 187
Query: 173 SALLFEEGQVY-RDIVG--SGFYIAPEVLRRR-YGKEIDIWSAGVILYILLS-GVPPFWA 227
L +VY + +G ++A E L Y D+WS GV+L+ ++S G P+
Sbjct: 188 ---LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG 244
Query: 228 ETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVL 278
T Y+ + QG + + + DL+R+ + P R + AQ+L
Sbjct: 245 MTCAELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 292
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 90/226 (39%), Gaps = 34/226 (15%)
Query: 27 FGRMLGRGQFGVSYLCT-----ENSTNRPYACKSIAKKPKMRLAENDM--IRREIQIRLY 79
G+ LG G FG L ++ NR K K K E D+ + E+++
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNR--VTKVAVKMLKSDATEKDLSDLISEMEMMKM 89
Query: 80 LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-------GYN---------SE 123
+ N++ + ++V++E G+L + + A+ +N S
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSS 149
Query: 124 RDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY 183
+D + + + S +HRDL N + +DN ++K+ DFG A
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNV--LVTEDN-VMKIADFGLARDIHHIDXX 206
Query: 184 RDIVGSGF---YIAPEVLRRR-YGKEIDIWSAGVILY--ILLSGVP 223
+ ++APE L R Y + D+WS GV+L+ L G P
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 99/220 (45%), Gaps = 16/220 (7%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
F + LG GQFGV + R +I + ++E++ I E ++ + LS + +
Sbjct: 13 FLKELGTGQFGV----VKYGKWRGQYDVAIKMIKEGSMSEDEFIE-EAKVMMNLSHE-KL 66
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSE-RDAATVLRAIVNAVNVCHSMGV 145
V+ + + ++ E G L + + + + + + + + A+ S
Sbjct: 67 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF 126
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPEVL-RRR 201
+HRDL N +D ++KV+DFG + + + Y GS F + PEVL +
Sbjct: 127 LHRDLAARN---CLVNDQGVVKVSDFGLSRYVLDDE-YTSSRGSKFPVRWSPPEVLMYSK 182
Query: 202 YGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
+ + DIW+ GV+++ + S G P+ T T + I QG
Sbjct: 183 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 222
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 96/231 (41%), Gaps = 38/231 (16%)
Query: 73 EIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA 132
E+++ L PN++ E +++ +E G+L D + K E D A A
Sbjct: 65 ELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD-FLRKSRVLETDPAF---A 120
Query: 133 IVN--------------AVNVCHSMGVM------HRDLKPENFSFISRDDNALLKVTDFG 172
I N A +V M + HRDL N I +N + K+ DFG
Sbjct: 121 IANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARN---ILVGENYVAKIADFG 177
Query: 173 SALLFEEGQVY-RDIVG--SGFYIAPEVLRRR-YGKEIDIWSAGVILYILLS-GVPPFWA 227
L +VY + +G ++A E L Y D+WS GV+L+ ++S G P+
Sbjct: 178 ---LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG 234
Query: 228 ETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVL 278
T Y+ + QG + + + DL+R+ + P R + AQ+L
Sbjct: 235 MTCAELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 282
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 9/143 (6%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST--- 376
L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 364
Query: 377 -----LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQ 430
L + + T ++++ E FR D D + ++ + EV++
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 431 YMEAGDIDGNGNIDSIEFVNLMT 453
+ DIDG+G ++ EFV +MT
Sbjct: 425 MIREADIDGDGQVNYEEFVQMMT 447
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 89/224 (39%), Gaps = 30/224 (13%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM---RLAENDM--IRREIQIRLYLS 81
G+ LG G FG + ++ +++ KM E D+ + E+++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-------GYNSER---------D 125
N++ + ++V++E G+L + + A+ Y+ R D
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD 185
+ + + S +HRDL N + +N ++K+ DFG A Y+
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARN---VLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 186 IVGSGF---YIAPEVL-RRRYGKEIDIWSAGVILY--ILLSGVP 223
++APE L R Y + D+WS GV+++ L G P
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 89/224 (39%), Gaps = 30/224 (13%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM---RLAENDM--IRREIQIRLYLS 81
G+ LG G FG + ++ +++ KM E D+ + E+++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIG 98
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-------GYNSER---------D 125
N++ + ++V++E G+L + + A+ Y+ R D
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD 185
+ + + S +HRDL N + +N ++K+ DFG A Y+
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARN---VLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 186 IVGSGF---YIAPEVL-RRRYGKEIDIWSAGVILY--ILLSGVP 223
++APE L R Y + D+WS GV+++ L G P
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 9/143 (6%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST--- 376
L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 377 -----LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQ 430
L + + T ++++ E FR D D + ++ + EV++
Sbjct: 364 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 423
Query: 431 YMEAGDIDGNGNIDSIEFVNLMT 453
+ DIDG+G ++ EFV +MT
Sbjct: 424 MIREADIDGDGQVNYEEFVQMMT 446
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 9/143 (6%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST--- 376
L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 377 -----LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQ 430
L + + T ++++ E FR D D + ++ + EV++
Sbjct: 364 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 423
Query: 431 YMEAGDIDGNGNIDSIEFVNLMT 453
+ DIDG+G ++ EFV +MT
Sbjct: 424 MIREADIDGDGQVNYEEFVQMMT 446
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 101/221 (45%), Gaps = 18/221 (8%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
F + LG GQFGV + R +I + ++E++ I E ++ + LS + +
Sbjct: 28 FLKELGTGQFGV----VKYGKWRGQYDVAIKMIKEGSMSEDEFIE-EAKVMMNLSHE-KL 81
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSE-RDAATVLRAIVNAVNVCHSMGV 145
V+ + + ++ E G L + + + + + + + + A+ S
Sbjct: 82 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF 141
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGF---YIAPEVLR-R 200
+HRDL N +D ++KV+DFG S + ++ + VGS F + PEVL
Sbjct: 142 LHRDLAARN---CLVNDQGVVKVSDFGLSRYVLDDEET--SSVGSKFPVRWSPPEVLMYS 196
Query: 201 RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
++ + DIW+ GV+++ + S G P+ T T + I QG
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 23/226 (10%)
Query: 29 RMLGRGQFGVSY----LCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYL---S 81
++LG G FG Y + + P A K +R + +EI Y+
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKV------LRENTSPKANKEILDEAYVMAGV 76
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVC 140
G P V T V +V +L G L D + +G +D I ++
Sbjct: 77 GSPYVSRLLGICLTST-VQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYL 135
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE--EGQVYRD--IVGSGFYIAPE 196
+ ++HRDL N S + +K+TDFG A L + E + + D V +
Sbjct: 136 EDVRLVHRDLAARNVLVKSPNH---VKITDFGLARLLDIDETEYHADGGKVPIKWMALES 192
Query: 197 VLRRRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGE 241
+LRRR+ + D+WS GV ++ L++ G P+ + D + +GE
Sbjct: 193 ILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGE 238
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 9/143 (6%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST--- 376
L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 377 -----LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQ 430
L + + T ++++ E FR D D + ++ + EV++
Sbjct: 364 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 423
Query: 431 YMEAGDIDGNGNIDSIEFVNLMT 453
+ DIDG+G ++ EFV +MT
Sbjct: 424 MIREADIDGDGQVNYEEFVQMMT 446
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 103/232 (44%), Gaps = 43/232 (18%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKP-----KMRLAENDMIR---REIQIRLYL 80
+ LG GQFG ++ N++ + A K++ KP + L E ++++ + +RLY
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTK-VAVKTL--KPGTMSVQAFLEEANLMKTLQHDKLVRLY- 74
Query: 81 SGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN-AVNV 139
+ E ++++ E G L D + S+ +L +++ + +
Sbjct: 75 ----------AVVTREEPIYIITEYMAKGSLLDFL-----KSDEGGKVLLPKLIDFSAQI 119
Query: 140 CHSMGVM------HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF-- 191
M + HRDL+ N + ++ + K+ DFG A + E+ + Y G+ F
Sbjct: 120 AEGMAYIERKNYIHRDLRAAN---VLVSESLMCKIADFGLARVIEDNE-YTAREGAKFPI 175
Query: 192 -YIAPEVLRRR-YGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQG 240
+ APE + + + D+WS G++LY I+ G P+ T A+ QG
Sbjct: 176 KWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQG 227
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 9/147 (6%)
Query: 316 IVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS 375
+ + L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 376 T--------LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXS 426
L + + T ++++ E FR D D + ++ +
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 427 EVNQYMEAGDIDGNGNIDSIEFVNLMT 453
EV+Q + DIDG+G ++ EFV +MT
Sbjct: 121 EVDQMIREADIDGDGQVNYEEFVQMMT 147
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 44/244 (18%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM---IRREIQIRLYLSGQPN 85
R LG G FG +L E P K + ++ A ++ RE ++ L + +
Sbjct: 19 RELGEGAFGKVFL-AECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHE-H 76
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNS-------------ERDAATVLRA 132
+V+F + + +V E + GDL + A G ++ + + +
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 133 IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY 192
I + S +HRDL N +N L+K+ DFG + RD+ + +Y
Sbjct: 137 IAAGMVYLASQHFVHRDLATRNCLV---GENLLVKIGDFGMS---------RDVYSTDYY 184
Query: 193 ------------IAPE-VLRRRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAIL 238
+ PE ++ R++ E D+WS GV+L+ I G P++ + + I
Sbjct: 185 RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECIT 244
Query: 239 QGEI 242
QG +
Sbjct: 245 QGRV 248
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 9/143 (6%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAV-KNSSTLE 378
L +E+ KE F D D +GT++ EL + +G TE +++ ++ V + +
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 379 SLCENLP--------TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQ 430
E L T ++++ E FR D D + ++ + EV++
Sbjct: 365 DFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 431 YMEAGDIDGNGNIDSIEFVNLMT 453
+ DIDG+G ++ EFV +MT
Sbjct: 425 MIREADIDGDGQVNYEEFVQMMT 447
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 89/224 (39%), Gaps = 30/224 (13%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM---RLAENDM--IRREIQIRLYLS 81
G+ LG G FG + ++ +++ KM E D+ + E+++ +
Sbjct: 31 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 90
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-------GYNSER---------D 125
N++ + ++V++E G+L + + A+ Y+ R D
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD 185
+ + + S +HRDL N + +N ++K+ DFG A Y+
Sbjct: 151 LVSCTYQLARGMEYLASQKCIHRDLAARN---VLVTENNVMKIADFGLARDINNIDYYKK 207
Query: 186 IVGSGF---YIAPEVL-RRRYGKEIDIWSAGVILY--ILLSGVP 223
++APE L R Y + D+WS GV+++ L G P
Sbjct: 208 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 251
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 9/143 (6%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST--- 376
L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 296 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 355
Query: 377 -----LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQ 430
L + + T ++++ E FR D D + ++ + EV++
Sbjct: 356 DFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 415
Query: 431 YMEAGDIDGNGNIDSIEFVNLMT 453
+ DIDG+G ++ EFV +MT
Sbjct: 416 MIREADIDGDGQVNYEEFVQMMT 438
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 27 FGRMLGRGQFGVSYLCTE-NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
F ++GRG FG Y T ++ + C + + E E I S PN
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 93
Query: 86 VVEFKS-TYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSM 143
V+ E + VV+ + GDL + I + +N + +D + + S
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 153
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSA--LLFEEGQVYRDIVGSGF---YIAPEVL 198
+HRDL N D+ +KV DFG A +L +E + G+ ++A E L
Sbjct: 154 KFVHRDLAARNCML---DEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 199 R-RRYGKEIDIWSAGVILYILLS-GVPPF 225
+ +++ + D+WS GV+L+ L++ G PP+
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMTRGAPPY 239
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 89/224 (39%), Gaps = 30/224 (13%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM---RLAENDM--IRREIQIRLYLS 81
G+ LG G FG + ++ +++ KM E D+ + E+++ +
Sbjct: 28 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 87
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-------GYNSER---------D 125
N++ + ++V++E G+L + + A+ Y+ R D
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD 185
+ + + S +HRDL N + +N ++K+ DFG A Y+
Sbjct: 148 LVSCTYQLARGMEYLASQKCIHRDLAARN---VLVTENNVMKIADFGLARDINNIDYYKK 204
Query: 186 IVGSGF---YIAPEVL-RRRYGKEIDIWSAGVILY--ILLSGVP 223
++APE L R Y + D+WS GV+++ L G P
Sbjct: 205 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 248
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 89/224 (39%), Gaps = 30/224 (13%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM---RLAENDM--IRREIQIRLYLS 81
G+ LG G FG + ++ +++ KM E D+ + E+++ +
Sbjct: 26 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 85
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-------GYNSER---------D 125
N++ + ++V++E G+L + + A+ Y+ R D
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD 185
+ + + S +HRDL N + +N ++K+ DFG A Y+
Sbjct: 146 LVSCTYQLARGMEYLASQKCIHRDLTARN---VLVTENNVMKIADFGLARDINNIDYYKK 202
Query: 186 IVGSGF---YIAPEVL-RRRYGKEIDIWSAGVILY--ILLSGVP 223
++APE L R Y + D+WS GV+++ L G P
Sbjct: 203 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 246
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 107/263 (40%), Gaps = 29/263 (11%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
Y GR +G G FG YL T+ + A K K K + + E +I + G
Sbjct: 9 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGV 63
Query: 85 NVVEFKSTYEDETAVHVVMELCEGG--DLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS 142
+ + + +VMEL DLF+ K S + + +++ + HS
Sbjct: 64 GIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYIHS 121
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY--------RDIVGSGFYIA 194
+HRD+KP+NF L+ + DFG A + + + + +++ G+ Y +
Sbjct: 122 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 181
Query: 195 PEV-LRRRYGKEIDIWSAG-VILYILLSGVPPFW----AETKKGTYDAI----LQGEIDF 244
L + D+ S G V++Y L +P W A TK+ Y+ I + I+
Sbjct: 182 INTHLGIEQSRRDDLESLGYVLMYFNLGSLP--WQGLKAATKRQKYERISEKKMSTPIEV 239
Query: 245 DTDPWPSISSTAKDLVRRMLTKD 267
+PS +T + R + D
Sbjct: 240 LCKGYPSEFATYLNFCRSLRFDD 262
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 107/263 (40%), Gaps = 29/263 (11%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
Y GR +G G FG YL T+ + A K K K + + E +I + G
Sbjct: 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGV 65
Query: 85 NVVEFKSTYEDETAVHVVMELCEGG--DLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS 142
+ + + +VMEL DLF+ K S + + +++ + HS
Sbjct: 66 GIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYIHS 123
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY--------RDIVGSGFYIA 194
+HRD+KP+NF L+ + DFG A + + + + +++ G+ Y +
Sbjct: 124 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 183
Query: 195 PEV-LRRRYGKEIDIWSAG-VILYILLSGVPPFW----AETKKGTYDAI----LQGEIDF 244
L + D+ S G V++Y L +P W A TK+ Y+ I + I+
Sbjct: 184 INTHLGIEQSRRDDLESLGYVLMYFNLGSLP--WQGLKAATKRQKYERISEKKMSTPIEV 241
Query: 245 DTDPWPSISSTAKDLVRRMLTKD 267
+PS +T + R + D
Sbjct: 242 LCKGYPSEFATYLNFCRSLRFDD 264
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 9/147 (6%)
Query: 316 IVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS 375
+ + L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 376 T--------LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXS 426
L + + T ++++ E FR D D + ++ +
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 427 EVNQYMEAGDIDGNGNIDSIEFVNLMT 453
EV++ + DIDG+G ++ EFV +MT
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMT 147
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 89/224 (39%), Gaps = 30/224 (13%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM---RLAENDM--IRREIQIRLYLS 81
G+ LG G FG + ++ +++ KM E D+ + E+++ +
Sbjct: 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 144
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-------GYNSER---------D 125
N++ + ++V++E G+L + + A+ Y+ R D
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD 185
+ + + S +HRDL N + +N ++K+ DFG A Y+
Sbjct: 205 LVSCTYQLARGMEYLASQKCIHRDLAARN---VLVTENNVMKIADFGLARDINNIDYYKK 261
Query: 186 IVGSGF---YIAPEVL-RRRYGKEIDIWSAGVILY--ILLSGVP 223
++APE L R Y + D+WS GV+++ L G P
Sbjct: 262 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 305
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 89/224 (39%), Gaps = 30/224 (13%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM---RLAENDM--IRREIQIRLYLS 81
G+ LG G FG + ++ +++ KM E D+ + E+++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-------GYNSER---------D 125
N++ + ++V++E G+L + + A+ Y+ R D
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD 185
+ + + S +HRDL N + +N ++++ DFG A Y+
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARN---VLVTENNVMRIADFGLARDINNIDYYKK 215
Query: 186 IVGSGF---YIAPEVL-RRRYGKEIDIWSAGVILY--ILLSGVP 223
++APE L R Y + D+WS GV+++ L G P
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 9/145 (6%)
Query: 317 VEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST 376
+ L DE+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 377 --------LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSE 427
L + + T ++KL E FR D D + ++ + E
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 428 VNQYMEAGDIDGNGNIDSIEFVNLM 452
V++ + D+DG+G ++ EFV +M
Sbjct: 121 VDEMIREADVDGDGQVNYEEFVQVM 145
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Query: 317 VEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST 376
E L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 377 --------LESLCENLPTKE-KQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSE 427
L + + ++ +++L+E F+ D D + ++ + E
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE 120
Query: 428 VNQYMEAGDIDGNGNIDSIEFVNLM 452
V++ + DIDG+G+I+ EFV +M
Sbjct: 121 VDEMIREADIDGDGHINYEEFVRMM 145
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Query: 381 CENLPTKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQYMEAGDIDGN 440
E L ++ + E F D D T+T +E+ + D DGN
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 441 GNIDSIEFVNLMT-DIYKLETPELLEKAFQYLDKNSD 476
G ID EF++LM + + ++ E L +AF+ D++ +
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGN 97
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 96/231 (41%), Gaps = 38/231 (16%)
Query: 73 EIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA 132
E+++ L PN++ E +++ +E G+L D + K E D A A
Sbjct: 72 ELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD-FLRKSRVLETDPAF---A 127
Query: 133 IVN--------------AVNVCHSMGVM------HRDLKPENFSFISRDDNALLKVTDFG 172
I N A +V M + HR+L N I +N + K+ DFG
Sbjct: 128 IANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARN---ILVGENYVAKIADFG 184
Query: 173 SALLFEEGQVY-RDIVG--SGFYIAPEVLRRR-YGKEIDIWSAGVILYILLS-GVPPFWA 227
L +VY + +G ++A E L Y D+WS GV+L+ ++S G P+
Sbjct: 185 ---LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG 241
Query: 228 ETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVL 278
T Y+ + QG + + + DL+R+ + P R + AQ+L
Sbjct: 242 MTCAELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 289
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 105/263 (39%), Gaps = 29/263 (11%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
Y GR +G G FG YL ++ A K K K + + E + + G
Sbjct: 11 YRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTK-----HPQLHIESKFYKMMQGGV 65
Query: 85 NVVEFKSTYEDETAVHVVMELCEGG--DLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS 142
+ K + +VMEL DLF+ K S + + +++ + HS
Sbjct: 66 GIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYIHS 123
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY--------RDIVGSGFYIA 194
+HRD+KP+NF L+ + DFG A + + + + +++ G+ Y +
Sbjct: 124 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 183
Query: 195 PEV-LRRRYGKEIDIWSAG-VILYILLSGVPPFW----AETKKGTYDAI----LQGEIDF 244
L + D+ S G V++Y L +P W A TK+ Y+ I + I+
Sbjct: 184 INTHLGIEQSRRDDLESLGYVLMYFNLGSLP--WQGLKAATKRQKYERISEKKMSTPIEV 241
Query: 245 DTDPWPSISSTAKDLVRRMLTKD 267
+PS ST + R + D
Sbjct: 242 LCKGYPSEFSTYLNFCRSLRFDD 264
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 27/216 (12%)
Query: 14 LGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRRE 73
LG + M + +G+G+FG L C + LAE ++
Sbjct: 3 LGSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVM--- 59
Query: 74 IQIRLYLSGQPNVVEFKST-YEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA 132
Q+R N+V+ E++ +++V E G L D + ++G S +L+
Sbjct: 60 TQLR-----HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKF 113
Query: 133 IVNAVNVCHSM------GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI 186
+++VC +M +HRDL N +S D+ A KV+DFG L +E +D
Sbjct: 114 ---SLDVCEAMEYLEGNNFVHRDLAARNV-LVSEDNVA--KVSDFG---LTKEASSTQDT 164
Query: 187 VGSGF-YIAPEVLRRR-YGKEIDIWSAGVILYILLS 220
+ APE LR + + D+WS G++L+ + S
Sbjct: 165 GKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Query: 315 VIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNS 374
+ + L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 3 AMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 62
Query: 375 ST--------LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXX 425
L + + T ++++ E FR D D + ++ +
Sbjct: 63 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 122
Query: 426 SEVNQYMEAGDIDGNGNIDSIEFVNLMT 453
EV++ + DIDG+G ++ EFV +MT
Sbjct: 123 EEVDEMIREADIDGDGQVNYEEFVQMMT 150
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 9/147 (6%)
Query: 316 IVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS 375
+ + L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 376 T--------LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXS 426
L + + T ++++ E FR D D + ++ +
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 427 EVNQYMEAGDIDGNGNIDSIEFVNLMT 453
EV++ + DIDG+G ++ EFV +MT
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMT 147
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 9/147 (6%)
Query: 316 IVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS 375
+ + L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 376 T--------LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXS 426
L + + T ++++ E FR D D + ++ +
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 427 EVNQYMEAGDIDGNGNIDSIEFVNLMT 453
EV++ + DIDG+G ++ EFV +MT
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMT 147
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 9/147 (6%)
Query: 316 IVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS 375
+ + L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 376 T--------LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXS 426
L + + T ++++ E FR D D + ++ +
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 427 EVNQYMEAGDIDGNGNIDSIEFVNLMT 453
EV++ + DIDG+G ++ EFV +MT
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMT 147
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 27 FGRMLGRGQFGVSYLCTE-NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
F ++GRG FG Y T ++ + C + + E E I S PN
Sbjct: 52 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 110
Query: 86 VVEFKS-TYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSM 143
V+ E + VV+ + GDL + I + +N + +D + + S
Sbjct: 111 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 170
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY--RDIVGSGF---YIAPEVL 198
+HRDL N D+ +KV DFG A + + Y + G+ ++A E L
Sbjct: 171 KFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 227
Query: 199 R-RRYGKEIDIWSAGVILYILLS-GVPPF 225
+ +++ + D+WS GV+L+ L++ G PP+
Sbjct: 228 QTQKFTTKSDVWSFGVLLWELMTRGAPPY 256
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 9/147 (6%)
Query: 316 IVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS 375
+ + L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 2 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 61
Query: 376 T--------LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXS 426
L + + T ++++ E FR D D + ++ +
Sbjct: 62 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 121
Query: 427 EVNQYMEAGDIDGNGNIDSIEFVNLMT 453
EV++ + DIDG+G ++ EFV +MT
Sbjct: 122 EVDEMIREADIDGDGQVNYEEFVQMMT 148
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 27 FGRMLGRGQFGVSYLCTE-NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
F ++GRG FG Y T ++ + C + + E E I S PN
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 92
Query: 86 VVEFKS-TYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSM 143
V+ E + VV+ + GDL + I + +N + +D + + S
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 152
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY--RDIVGSGF---YIAPEVL 198
+HRDL N D+ +KV DFG A + + Y + G+ ++A E L
Sbjct: 153 KFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 199 R-RRYGKEIDIWSAGVILYILLS-GVPPF 225
+ +++ + D+WS GV+L+ L++ G PP+
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 27 FGRMLGRGQFGVSYLCTE-NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
F ++GRG FG Y T ++ + C + + E E I S PN
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 91
Query: 86 VVEFKS-TYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSM 143
V+ E + VV+ + GDL + I + +N + +D + + S
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 151
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSA--LLFEEGQVYRDIVGSGF---YIAPEVL 198
+HRDL N D+ +KV DFG A + +E + G+ ++A E L
Sbjct: 152 KFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESL 208
Query: 199 R-RRYGKEIDIWSAGVILYILLS-GVPPF 225
+ +++ + D+WS GV+L+ L++ G PP+
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMTRGAPPY 237
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 88/224 (39%), Gaps = 30/224 (13%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM---RLAENDM--IRREIQIRLYLS 81
G+ LG G FG + ++ +++ KM E D+ + E+++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-------GYNSER---------D 125
N++ + ++V++ G+L + + A+ Y+ R D
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD 185
+ + + S +HRDL N + +N ++K+ DFG A Y+
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARN---VLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 186 IVGSGF---YIAPEVL-RRRYGKEIDIWSAGVILY--ILLSGVP 223
++APE L R Y + D+WS GV+++ L G P
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 27 FGRMLGRGQFGVSYLCTE-NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
F ++GRG FG Y T ++ + C + + E E I S PN
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 92
Query: 86 VVEFKS-TYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSM 143
V+ E + VV+ + GDL + I + +N + +D + + S
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 152
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY--RDIVGSGF---YIAPEVL 198
+HRDL N D+ +KV DFG A + + Y + G+ ++A E L
Sbjct: 153 KFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 199 R-RRYGKEIDIWSAGVILYILLS-GVPPF 225
+ +++ + D+WS GV+L+ L++ G PP+
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 27 FGRMLGRGQFGVSYLCTE-NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
F ++GRG FG Y T ++ + C + + E E I S PN
Sbjct: 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 89
Query: 86 VVEFKS-TYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSM 143
V+ E + VV+ + GDL + I + +N + +D + + S
Sbjct: 90 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 149
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY--RDIVGSGF---YIAPEVL 198
+HRDL N D+ +KV DFG A + + Y + G+ ++A E L
Sbjct: 150 KFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 206
Query: 199 R-RRYGKEIDIWSAGVILYILLS-GVPPF 225
+ +++ + D+WS GV+L+ L++ G PP+
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMTRGAPPY 235
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 27 FGRMLGRGQFGVSYLCTE-NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
F ++GRG FG Y T ++ + C + + E E I S PN
Sbjct: 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 87
Query: 86 VVEFKS-TYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSM 143
V+ E + VV+ + GDL + I + +N + +D + + S
Sbjct: 88 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 147
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY--RDIVGSGF---YIAPEVL 198
+HRDL N D+ +KV DFG A + + Y + G+ ++A E L
Sbjct: 148 KFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 204
Query: 199 R-RRYGKEIDIWSAGVILYILLS-GVPPF 225
+ +++ + D+WS GV+L+ L++ G PP+
Sbjct: 205 QTQKFTTKSDVWSFGVLLWELMTRGAPPY 233
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 27 FGRMLGRGQFGVSYLCTE-NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS--GQ 83
F ++GRG FG Y T ++ + C A K R+ + + + + + +
Sbjct: 53 FNEVIGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSH 109
Query: 84 PNVVEFKS-TYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCH 141
PNV+ E + VV+ + GDL + I + +N + +D + +
Sbjct: 110 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 169
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY--RDIVGSGF---YIAPE 196
S +HRDL N D+ +KV DFG A + + Y + G+ ++A E
Sbjct: 170 SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 226
Query: 197 VLR-RRYGKEIDIWSAGVILYILLS-GVPPF 225
L+ +++ + D+WS GV+L+ L++ G PP+
Sbjct: 227 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 257
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 27 FGRMLGRGQFGVSYLCTE-NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
F ++GRG FG Y T ++ + C + + E E I S PN
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 91
Query: 86 VVEFKS-TYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSM 143
V+ E + VV+ + GDL + I + +N + +D + + S
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 151
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY--RDIVGSGF---YIAPEVL 198
+HRDL N D+ +KV DFG A + + Y + G+ ++A E L
Sbjct: 152 KFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 208
Query: 199 R-RRYGKEIDIWSAGVILYILLS-GVPPF 225
+ +++ + D+WS GV+L+ L++ G PP+
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMTRGAPPY 237
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 27 FGRMLGRGQFGVSYLCTE-NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
F ++GRG FG Y T ++ + C + + E E I S PN
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 90
Query: 86 VVEFKS-TYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSM 143
V+ E + VV+ + GDL + I + +N + +D + + S
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 150
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY--RDIVGSGF---YIAPEVL 198
+HRDL N D+ +KV DFG A + + Y + G+ ++A E L
Sbjct: 151 KFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 207
Query: 199 R-RRYGKEIDIWSAGVILYILLS-GVPPF 225
+ +++ + D+WS GV+L+ L++ G PP+
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMTRGAPPY 236
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 27 FGRMLGRGQFGVSYLCTE-NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
F ++GRG FG Y T ++ + C + + E E I S PN
Sbjct: 26 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 84
Query: 86 VVEFKS-TYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSM 143
V+ E + VV+ + GDL + I + +N + +D + + S
Sbjct: 85 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 144
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY--RDIVGSGF---YIAPEVL 198
+HRDL N D+ +KV DFG A + + Y + G+ ++A E L
Sbjct: 145 KFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 201
Query: 199 R-RRYGKEIDIWSAGVILYILLS-GVPPF 225
+ +++ + D+WS GV+L+ L++ G PP+
Sbjct: 202 QTQKFTTKSDVWSFGVLLWELMTRGAPPY 230
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 317 VEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST 376
+ L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 7 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 66
Query: 377 --------LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSE 427
L + + T ++++ E FR D D + ++ + E
Sbjct: 67 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 126
Query: 428 VNQYMEAGDIDGNGNIDSIEFVNLMT 453
V++ + DIDG+G ++ EFV +MT
Sbjct: 127 VDEMIREADIDGDGQVNYEEFVQMMT 152
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 317 VEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST 376
+ L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 377 --------LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSE 427
L + + T ++++ E FR D D + ++ + E
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 428 VNQYMEAGDIDGNGNIDSIEFVNLMT 453
V++ + DIDG+G ++ EFV +MT
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMMT 146
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 9/147 (6%)
Query: 316 IVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS 375
+ + L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 376 T--------LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXS 426
L + + T ++++ E FR D D + ++ +
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 427 EVNQYMEAGDIDGNGNIDSIEFVNLMT 453
EV++ + DIDG+G ++ EFV +MT
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVTMMT 147
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 317 VEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST 376
+ L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 377 --------LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSE 427
L + + T ++++ E FR D D + ++ + E
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 428 VNQYMEAGDIDGNGNIDSIEFVNLMT 453
V++ + DIDG+G ++ EFV +MT
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMMT 146
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 9/143 (6%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST--- 376
L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 377 -----LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQ 430
L + + T ++++ E FR D D + ++ + EV++
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 121
Query: 431 YMEAGDIDGNGNIDSIEFVNLMT 453
+ DIDG+G ++ EFV +MT
Sbjct: 122 MIREADIDGDGQVNYEEFVQMMT 144
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 9/143 (6%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST--- 376
L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 377 -----LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQ 430
L + + T ++++ E FR D D + ++ + EV++
Sbjct: 61 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 120
Query: 431 YMEAGDIDGNGNIDSIEFVNLMT 453
+ DIDG+G ++ EFV +MT
Sbjct: 121 MIREADIDGDGQVNYEEFVQMMT 143
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 88/224 (39%), Gaps = 30/224 (13%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM---RLAENDM--IRREIQIRLYLS 81
G+ LG G FG + ++ +++ KM E D+ + E+++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-------GYNSER---------D 125
N++ + ++V++ G+L + + A+ Y+ R D
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD 185
+ + + S +HRDL N + +N ++K+ DFG A Y+
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARN---VLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 186 IVGSGF---YIAPEVL-RRRYGKEIDIWSAGVILY--ILLSGVP 223
++APE L R Y + D+WS GV+++ L G P
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 9/143 (6%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST--- 376
L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 377 -----LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQ 430
L + + T ++++ E FR D D + ++ + EV++
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 121
Query: 431 YMEAGDIDGNGNIDSIEFVNLMT 453
+ DIDG+G ++ EFV +MT
Sbjct: 122 MIREADIDGDGQVNYEEFVQMMT 144
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 317 VEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST 376
+ L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 377 --------LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSE 427
L + + T ++++ E FR D D + ++ + E
Sbjct: 62 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEE 121
Query: 428 VNQYMEAGDIDGNGNIDSIEFVNLMT 453
V++ + DIDG+G ++ EFV +MT
Sbjct: 122 VDEMIREADIDGDGQVNYEEFVQMMT 147
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 317 VEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST 376
+ L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 377 --------LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSE 427
L + + T ++++ E FR D D + ++ + E
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEE 120
Query: 428 VNQYMEAGDIDGNGNIDSIEFVNLMT 453
V++ + DIDG+G ++ EFV +MT
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMMT 146
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 27 FGRMLGRGQFGVSYLCTE-NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
F ++GRG FG Y T ++ + C + + E E I S PN
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 93
Query: 86 VVEFKS-TYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSM 143
V+ E + VV+ + GDL + I + +N + +D + + S
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 153
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSA--LLFEEGQVYRDIVGSGF---YIAPEVL 198
+HRDL N D+ +KV DFG A + +E + G+ ++A E L
Sbjct: 154 KFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 199 R-RRYGKEIDIWSAGVILYILLS-GVPPF 225
+ +++ + D+WS GV+L+ L++ G PP+
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMTRGAPPY 239
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 9/147 (6%)
Query: 316 IVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS 375
+ + L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 376 T--------LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXS 426
L + + T ++++ E FR D D + ++ +
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 427 EVNQYMEAGDIDGNGNIDSIEFVNLMT 453
EV++ + DIDG+G ++ EFV +MT
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVTMMT 147
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 88/224 (39%), Gaps = 30/224 (13%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM---RLAENDM--IRREIQIRLYLS 81
G+ LG G FG + ++ +++ KM E D+ + E+++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-------GYNSER---------D 125
N++ + ++V++E G+L + + A+ Y+ R D
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD 185
+ + + S +HRDL N + +N ++K+ DFG A +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARN---VLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 186 IVGSGF---YIAPEVL-RRRYGKEIDIWSAGVILY--ILLSGVP 223
++APE L R Y + D+WS GV+++ L G P
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 88/224 (39%), Gaps = 30/224 (13%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM---RLAENDM--IRREIQIRLYLS 81
G+ LG G FG + ++ +++ KM E D+ + E+++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-------GYNSER---------D 125
N++ + ++V++E G+L + + A+ Y+ R D
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD 185
+ + + S +HRDL N + +N ++K+ DFG A +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARN---VLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 186 IVGSGF---YIAPEVL-RRRYGKEIDIWSAGVILY--ILLSGVP 223
++APE L R Y + D+WS GV+++ L G P
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 9/142 (6%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST--- 376
L +E+ Q ++E F DTD +GT+ EL+ + +G + ++K ++ + +
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 377 -LESLCENLPTK-----EKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQ 430
E + K ++++++ FR D DNS T+T+ E+ +
Sbjct: 82 DFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQE 141
Query: 431 YMEAGDIDGNGNIDSIEFVNLM 452
+ D + + ID EF+ +M
Sbjct: 142 MIAEADRNDDNEIDEDEFIRIM 163
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 384 LPTKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQYMEAGDIDGNGNI 443
L ++KQ++ E F DTD S T+ E+ + + D DG+G I
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 444 DSIEFVNLMT-DIYKLETPELLEKAFQYLDKNS 475
D EF+ +MT + + ++ E + KAF+ D ++
Sbjct: 82 DFEEFLTMMTAKMGERDSREEILKAFRLFDDDN 114
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 317 VEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST 376
+ L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 377 --------LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSE 427
L + + T ++++ E FR D D + ++ + E
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 428 VNQYMEAGDIDGNGNIDSIEFVNLMT 453
V++ + DIDG+G ++ EFV +MT
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVTMMT 146
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 9/143 (6%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST--- 376
L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 3 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 62
Query: 377 -----LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQ 430
L + + T ++++ E FR D D + ++ + EV++
Sbjct: 63 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 122
Query: 431 YMEAGDIDGNGNIDSIEFVNLMT 453
+ DIDG+G ++ EFV +MT
Sbjct: 123 MIREADIDGDGQVNYEEFVQMMT 145
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 9/147 (6%)
Query: 316 IVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS 375
+ + L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 376 T--------LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXS 426
L + + T ++++ E FR D D + ++ +
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 427 EVNQYMEAGDIDGNGNIDSIEFVNLMT 453
EV++ + DIDG+G ++ EFV +MT
Sbjct: 121 EVDEMIRESDIDGDGQVNYEEFVTMMT 147
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 9/142 (6%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST--- 376
L DE+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 377 -----LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQ 430
L + + T +++L E FR D D + ++ + EV++
Sbjct: 61 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 120
Query: 431 YMEAGDIDGNGNIDSIEFVNLM 452
+ D+DG+G ++ EFV +M
Sbjct: 121 MIREADVDGDGQVNYEEFVQVM 142
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 27 FGRMLGRGQFGVSYLCTE-NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
F ++GRG FG Y T ++ + C + + E E I S PN
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 90
Query: 86 VVEFKS-TYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSM 143
V+ E + VV+ + GDL + I + +N + +D + + S
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 150
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSA--LLFEEGQVYRDIVGSGF---YIAPEVL 198
+HRDL N D+ +KV DFG A + +E + G+ ++A E L
Sbjct: 151 KFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 207
Query: 199 R-RRYGKEIDIWSAGVILYILLS-GVPPF 225
+ +++ + D+WS GV+L+ L++ G PP+
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMTRGAPPY 236
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 63/145 (43%), Gaps = 9/145 (6%)
Query: 317 VEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST 376
+ L DE+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 377 --------LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSE 427
L + + T +++L E FR D D + ++ + E
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 428 VNQYMEAGDIDGNGNIDSIEFVNLM 452
V++ + D+DG+G ++ EFV +M
Sbjct: 121 VDEMIREADVDGDGQVNYEEFVQVM 145
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQYMEAGDIDGNGN 442
NL ++ + E F D DN+ +++ S +EVN M D+DGN
Sbjct: 4 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 63
Query: 443 IDSIEFVNLMTDIYKLETP--ELLEKAFQYLDKNSD 476
I+ EF+ LM+ K ELLE AF+ DKN D
Sbjct: 64 IEFSEFLALMSRQLKSNDSEQELLE-AFKVFDKNGD 98
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 62/143 (43%), Gaps = 10/143 (6%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLM--------EAV 371
L +E+ KE F D D NG++S EL + +G +E +V LM +
Sbjct: 5 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 64
Query: 372 KNSSTLESLCENLPTKE-KQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQ 430
+ S L + L + + +Q+L+E F+ D + ++ + +EV+
Sbjct: 65 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDD 124
Query: 431 YMEAGDIDGNGNIDSIEFVNLMT 453
+ DG+G I+ +F L++
Sbjct: 125 MLREVS-DGSGEINIQQFAALLS 146
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST--- 376
L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 377 -----LESLCENLPTKE-KQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQ 430
L + + ++ +++L+E F+ D D + ++ + EV++
Sbjct: 64 DFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDE 123
Query: 431 YMEAGDIDGNGNIDSIEFVNLM 452
+ DIDG+G+I+ EFV +M
Sbjct: 124 MIREADIDGDGHINYEEFVRMM 145
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Query: 381 CENLPTKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQYMEAGDIDGN 440
+ L ++ + E F D D T+T +E+ + D DGN
Sbjct: 1 AQELTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 441 GNIDSIEFVNLMT-DIYKLETPELLEKAFQYLDKNSD 476
G ID EF++LM + + ++ E L +AF+ D++ +
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGN 97
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 27 FGRMLGRGQFGVSYLCTE-NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
F ++GRG FG Y T ++ + C + + E E I S PN
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 92
Query: 86 VVEFKS-TYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSM 143
V+ E + VV+ + GDL + I + +N + +D + + S
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 152
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSA--LLFEEGQVYRDIVGSGF---YIAPEVL 198
+HRDL N D+ +KV DFG A + +E + G+ ++A E L
Sbjct: 153 KFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 199 R-RRYGKEIDIWSAGVILYILLS-GVPPF 225
+ +++ + D+WS GV+L+ L++ G PP+
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 317 VEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST 376
+ L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 377 --------LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSE 427
L + + T ++++ E FR D D + ++ + E
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 428 VNQYMEAGDIDGNGNIDSIEFVNLMT 453
V++ + DIDG+G ++ EFV +MT
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVTMMT 146
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 63/145 (43%), Gaps = 9/145 (6%)
Query: 317 VEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST 376
+ L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 377 --------LESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEV 428
L + + E++ + E FR D D + ++ + EV
Sbjct: 61 GTIDFPEFLTMMARKMKDSEEE-IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 119
Query: 429 NQYMEAGDIDGNGNIDSIEFVNLMT 453
++ + DIDG+G ++ EFV +MT
Sbjct: 120 DEMIREADIDGDGQVNYEEFVTMMT 144
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 380 LCENLPTKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQYMEAGDIDG 439
+ +NL ++ + E F D DNS +++ S +EV M D+DG
Sbjct: 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDG 60
Query: 440 NGNIDSIEFVNLMTDIYKLETP--ELLEKAFQYLDKNSD 476
N I+ EF+ LM+ K ELLE AF+ DKN D
Sbjct: 61 NHAIEFSEFLALMSRQLKCNDSEQELLE-AFKVFDKNGD 98
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 326 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS 375
Q L E F D + +G +S EL+ LT +G LT+ +V ++ V + S
Sbjct: 84 QELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVSDGS 133
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 317 VEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST 376
+ L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 377 --------LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSE 427
L + + T ++++ E FR D D + ++ + E
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 428 VNQYMEAGDIDGNGNIDSIEFVNLMT 453
V++ + DIDG+G ++ EFV +MT
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMMT 146
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 27 FGRMLGRGQFGVSYLCTE-NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
F ++GRG FG Y T ++ + C + + E E I S PN
Sbjct: 39 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 97
Query: 86 VVEFKS-TYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSM 143
V+ E + VV+ + GDL + I + +N + +D + + S
Sbjct: 98 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 157
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSA--LLFEEGQVYRDIVGSGF---YIAPEVL 198
+HRDL N D+ +KV DFG A + +E + G+ ++A E L
Sbjct: 158 KFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 214
Query: 199 R-RRYGKEIDIWSAGVILYILLS-GVPPF 225
+ +++ + D+WS GV+L+ L++ G PP+
Sbjct: 215 QTQKFTTKSDVWSFGVLLWELMTRGAPPY 243
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 27 FGRMLGRGQFGVSYLCTE-NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
F ++GRG FG Y T ++ + C + + E E I S PN
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 92
Query: 86 VVEFKS-TYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSM 143
V+ E + VV+ + GDL + I + +N + +D + + S
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 152
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSA--LLFEEGQVYRDIVGSGF---YIAPEVL 198
+HRDL N D+ +KV DFG A + +E + G+ ++A E L
Sbjct: 153 KFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 199 R-RRYGKEIDIWSAGVILYILLS-GVPPF 225
+ +++ + D+WS GV+L+ L++ G PP+
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 7/88 (7%)
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIV--GSGFY 192
++ H+ ++HRD+K N I D+N + K+TDFG S E GQ + V G+ Y
Sbjct: 151 GLHYLHTRAIIHRDVKSIN---ILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGY 207
Query: 193 IAPE-VLRRRYGKEIDIWSAGVILYILL 219
I PE ++ R ++ D++S GV+L+ +L
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 85/211 (40%), Gaps = 18/211 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTN-RPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
+LG G F Y T+ N K + K K I ++ RL S Q +
Sbjct: 71 HLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFM 130
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVL-----RAIVNAVNVCHS 142
+F S + + +V EL G L + I E+ L ++ + H
Sbjct: 131 KFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD 190
Query: 143 MGVMHRDLKPENF----SFISRDD----NALLKVTDFGSAL---LFEEGQVYR-DIVGSG 190
++H D+KP+NF F+ +DD +A L + D G ++ LF +G ++ SG
Sbjct: 191 CEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSG 250
Query: 191 FYIAPEVLRRRYGKEIDIWSAGVILYILLSG 221
F + + + +ID + +Y +L G
Sbjct: 251 FQCVEMLSNKPWNYQIDYFGVAATVYCMLFG 281
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 27 FGRMLGRGQFGVSYLCTE-NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
F ++GRG FG Y T ++ + C + + E E I S PN
Sbjct: 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 151
Query: 86 VVEFKS-TYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSM 143
V+ E + VV+ + GDL + I + +N + +D + + S
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 211
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSA--LLFEEGQVYRDIVGSGF---YIAPEVL 198
+HRDL N D+ +KV DFG A + +E + G+ ++A E L
Sbjct: 212 KFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 268
Query: 199 R-RRYGKEIDIWSAGVILYILLS-GVPPF 225
+ +++ + D+WS GV+L+ L++ G PP+
Sbjct: 269 QTQKFTTKSDVWSFGVLLWELMTRGAPPY 297
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 8/140 (5%)
Query: 322 DEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST----- 376
+E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Query: 377 ---LESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQYME 433
L + + + +++ E FR D D + ++ + EV++ +
Sbjct: 62 PEFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 121
Query: 434 AGDIDGNGNIDSIEFVNLMT 453
+IDG+G ++ EFV +MT
Sbjct: 122 EANIDGDGQVNYEEFVQMMT 141
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 34/83 (40%)
Query: 394 EKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQYMEAGDIDGNGNIDSIEFVNLMT 453
E F D D T+T +E+ + D DGNG ID EF+ +M
Sbjct: 10 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 69
Query: 454 DIYKLETPELLEKAFQYLDKNSD 476
K E + +AF+ DK+ +
Sbjct: 70 RKMKDTDSEEIREAFRVFDKDGN 92
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 32/56 (57%)
Query: 313 IKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLM 368
+ ++ + D +++ ++E F D D NG +S ELR +T +G LT+ +V ++
Sbjct: 65 LTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 120
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 9/141 (6%)
Query: 322 DEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST----- 376
+E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
Query: 377 ---LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQYM 432
L + + T ++++ E FR D D + ++ + EV++ +
Sbjct: 64 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 123
Query: 433 EAGDIDGNGNIDSIEFVNLMT 453
DIDG+G ++ EFV +MT
Sbjct: 124 READIDGDGQVNYEEFVQMMT 144
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 9/141 (6%)
Query: 322 DEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST----- 376
+E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Query: 377 ---LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQYM 432
L + + T ++++ E FR D D + ++ + EV++ +
Sbjct: 62 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 121
Query: 433 EAGDIDGNGNIDSIEFVNLMT 453
DIDG+G ++ EFV +MT
Sbjct: 122 READIDGDGQVNYEEFVQMMT 142
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQYMEAGDIDGNGN 442
NL ++ + E F D DN+ +++ S +EVN M D+DGN
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 443 IDSIEFVNLMTDIYKLETP--ELLEKAFQYLDKNSD 476
I+ EF+ LM+ K ELLE AF+ DKN D
Sbjct: 63 IEFSEFLALMSRQLKSNDSEQELLE-AFKVFDKNGD 97
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 62/143 (43%), Gaps = 10/143 (6%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLM--------EAV 371
L +E+ KE F D D NG++S EL + +G +E +V LM +
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 372 KNSSTLESLCENLPTKE-KQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQ 430
+ S L + L + + +Q+L+E F+ D + ++ + +EV+
Sbjct: 64 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDD 123
Query: 431 YMEAGDIDGNGNIDSIEFVNLMT 453
+ DG+G I+ +F L++
Sbjct: 124 MLREVS-DGSGEINIQQFAALLS 145
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 63/142 (44%), Gaps = 9/142 (6%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST--- 376
L +E+ Q ++E F DTD +GT+ EL+ + +G + ++K ++ + +
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTI 61
Query: 377 -LESLCENLPTK-----EKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQ 430
E + + K ++++M+ FR D D + ++ E+ +
Sbjct: 62 DFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQE 121
Query: 431 YMEAGDIDGNGNIDSIEFVNLM 452
++ D DG+G ++ EF +M
Sbjct: 122 MIDEADRDGDGEVNEEEFFRIM 143
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQYMEAGDIDGNGN 442
L ++KQ++ E F DTD S T+ E+ + + D DG+G
Sbjct: 1 GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGT 60
Query: 443 IDSIEFVNLMT-DIYKLETPELLEKAFQYLDKN 474
ID EF+ +MT + + ++ E + KAF+ D +
Sbjct: 61 IDFEEFLQMMTAKMGERDSREEIMKAFRLFDDD 93
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSEVNQYMEAGDIDGNGN 442
NL ++ + E F D DN+ +++ S +EVN M D+DGN
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 443 IDSIEFVNLMTDIYKLETP--ELLEKAFQYLDKNSD 476
I+ EF+ LM+ K ELLE AF+ DKN D
Sbjct: 63 IEFSEFLALMSRQLKSNDSEQELLE-AFKVFDKNGD 97
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLM--------EAV 371
L +E+ KE F D D NG++S EL + +G +E +V LM +
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 372 KNSSTLESLCENLPTKE-KQKLMEKFREMDTDNSDTL 407
+ S L + L + + +Q+L+E F+ D N D L
Sbjct: 64 EFSEFLALMSRQLKSNDSEQELLEAFKVFDK-NGDGL 99
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 317 VEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST 376
+ L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 377 --------LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSE 427
L + + T ++++ E FR D D + ++ + E
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 428 VNQYMEAGDIDGNGNIDSIEFVNLMT 453
V++ + +IDG+G ++ EFV +MT
Sbjct: 121 VDEMIREANIDGDGQVNYEEFVQMMT 146
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG---SALLFEEGQVYRDIVGSGFY 192
++ H+ ++HRD+K N I D+N + K+TDFG ++ + + G+ Y
Sbjct: 151 GLHYLHTRAIIHRDVKSIN---ILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGY 207
Query: 193 IAPE-VLRRRYGKEIDIWSAGVILYILLSG 221
I PE ++ R ++ D++S GV+L+ +L
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCA 237
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 63/146 (43%), Gaps = 9/146 (6%)
Query: 316 IVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS 375
+ + L D++ KE F D D +G ++ EL + +G TE +++ ++ V
Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 376 T--------LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXS 426
L + + T +++L E FR D D + ++ +
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 427 EVNQYMEAGDIDGNGNIDSIEFVNLM 452
EV++ + D+DG+G I+ EFV +M
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVM 146
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 103/271 (38%), Gaps = 31/271 (11%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP---- 84
R LG+G FG+ Y + A +A K + E+ +R I+ S
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVK---TVNESASLRERIEFLNEASVMKGFTC 78
Query: 85 -NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIA----KGYNSERDAATVLRAIVNAVNV 139
+VV VVMEL GDL + + N R T+ I A +
Sbjct: 79 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 138
Query: 140 CHSMGVM------HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF-- 191
M + HRDL N ++ D +K+ DFG E YR G G
Sbjct: 139 ADGMAYLNAKKFVHRDLAARN-CMVAHDFT--VKIGDFGMTRDIYETDYYRK-GGKGLLP 194
Query: 192 --YIAPEVLRRR-YGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTD 247
++APE L+ + D+WS GV+L+ + S P+ + + ++ G D
Sbjct: 195 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 254
Query: 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVL 278
P DL+R +PK R T +++
Sbjct: 255 NCP---ERVTDLMRMCWQFNPKMRPTFLEIV 282
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 109/274 (39%), Gaps = 51/274 (18%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM---IRREIQIRLYLSGQPNVV 87
LG G FG +L E P K + ++ A +RE ++ L Q ++V
Sbjct: 26 LGEGAFGKVFL-AECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQ-HIV 83
Query: 88 EFKSTYEDETAVHVVMELCEGGDL--FDR-------IIAKGYNSERDAATVLRAIVNAVN 138
F + + +V E GDL F R ++A G + + + + A
Sbjct: 84 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 139 VCHSM------GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY 192
V M +HRDL N ++K+ DFG + RDI + +Y
Sbjct: 144 VAAGMVYLAGLHFVHRDLATRNCLV---GQGLVVKIGDFGMS---------RDIYSTDYY 191
Query: 193 ------------IAPE-VLRRRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAIL 238
+ PE +L R++ E D+WS GV+L+ I G P++ + D I
Sbjct: 192 RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT 251
Query: 239 QG-EIDFDTDPWPSISSTAKDLVRRMLTKDPKRR 271
QG E++ P + + ++R ++P++R
Sbjct: 252 QGRELERPRACPPEVYA----IMRGCWQREPQQR 281
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 103/271 (38%), Gaps = 31/271 (11%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP---- 84
R LG+G FG+ Y + A +A K + E+ +R I+ S
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVK---TVNESASLRERIEFLNEASVMKGFTC 79
Query: 85 -NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIA----KGYNSERDAATVLRAIVNAVNV 139
+VV VVMEL GDL + + N R T+ I A +
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 140 CHSMGVM------HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF-- 191
M + HRDL N ++ D +K+ DFG E YR G G
Sbjct: 140 ADGMAYLNAKKFVHRDLAARN-CMVAHDFT--VKIGDFGMTRDIYETDYYRK-GGKGLLP 195
Query: 192 --YIAPEVLRRR-YGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTD 247
++APE L+ + D+WS GV+L+ + S P+ + + ++ G D
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 255
Query: 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVL 278
P DL+R +PK R T +++
Sbjct: 256 NCP---ERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 109/274 (39%), Gaps = 51/274 (18%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM---IRREIQIRLYLSGQPNVV 87
LG G FG +L E P K + ++ A +RE ++ L Q ++V
Sbjct: 20 LGEGAFGKVFL-AECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQ-HIV 77
Query: 88 EFKSTYEDETAVHVVMELCEGGDL--FDR-------IIAKGYNSERDAATVLRAIVNAVN 138
F + + +V E GDL F R ++A G + + + + A
Sbjct: 78 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 139 VCHSM------GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY 192
V M +HRDL N ++K+ DFG + RDI + +Y
Sbjct: 138 VAAGMVYLAGLHFVHRDLATRNCLV---GQGLVVKIGDFGMS---------RDIYSTDYY 185
Query: 193 ------------IAPE-VLRRRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAIL 238
+ PE +L R++ E D+WS GV+L+ I G P++ + D I
Sbjct: 186 RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT 245
Query: 239 QG-EIDFDTDPWPSISSTAKDLVRRMLTKDPKRR 271
QG E++ P + + ++R ++P++R
Sbjct: 246 QGRELERPRACPPEVYA----IMRGCWQREPQQR 275
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 103/271 (38%), Gaps = 31/271 (11%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP---- 84
R LG+G FG+ Y + A +A K + E+ +R I+ S
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVK---TVNESASLRERIEFLNEASVMKGFTC 79
Query: 85 -NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIA----KGYNSERDAATVLRAIVNAVNV 139
+VV VVMEL GDL + + N R T+ I A +
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 140 CHSMGVM------HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF-- 191
M + HRDL N ++ D +K+ DFG E YR G G
Sbjct: 140 ADGMAYLNAKKFVHRDLAARN-CMVAHDFT--VKIGDFGMTRDIYETAYYRK-GGKGLLP 195
Query: 192 --YIAPEVLRRR-YGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTD 247
++APE L+ + D+WS GV+L+ + S P+ + + ++ G D
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 255
Query: 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVL 278
P DL+R +PK R T +++
Sbjct: 256 NCP---ERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 109/274 (39%), Gaps = 51/274 (18%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM---IRREIQIRLYLSGQPNVV 87
LG G FG +L E P K + ++ A +RE ++ L Q ++V
Sbjct: 49 LGEGAFGKVFL-AECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQ-HIV 106
Query: 88 EFKSTYEDETAVHVVMELCEGGDL--FDR-------IIAKGYNSERDAATVLRAIVNAVN 138
F + + +V E GDL F R ++A G + + + + A
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 139 VCHSM------GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY 192
V M +HRDL N ++K+ DFG + RDI + +Y
Sbjct: 167 VAAGMVYLAGLHFVHRDLATRNCLV---GQGLVVKIGDFGMS---------RDIYSTDYY 214
Query: 193 ------------IAPE-VLRRRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAIL 238
+ PE +L R++ E D+WS GV+L+ I G P++ + D I
Sbjct: 215 RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT 274
Query: 239 QG-EIDFDTDPWPSISSTAKDLVRRMLTKDPKRR 271
QG E++ P + + ++R ++P++R
Sbjct: 275 QGRELERPRACPPEVYA----IMRGCWQREPQQR 304
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 99/235 (42%), Gaps = 29/235 (12%)
Query: 3 CSVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM 62
C SK Q+ P A+E + LG GQFG ++ T N + A K++ KP
Sbjct: 169 CMSSKPQK-PWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTK-VAVKTM--KPGS 224
Query: 63 RLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNS 122
E + + L +V+ + E ++++ E G L D + S
Sbjct: 225 MSVEAFLAEANVMKTLQ---HDKLVKLHAVVTKE-PIYIITEFMAKGSLLDFL-----KS 275
Query: 123 ERDAATVLRAIVN-AVNVCHSMGV------MHRDLKPENFSFISRDDNALLKVTDFGSAL 175
+ + L +++ + + M +HRDL+ N I + + K+ DFG A
Sbjct: 276 DEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAAN---ILVSASLVCKIADFGLAR 332
Query: 176 LFEEGQVYRDIVGSGF---YIAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPF 225
+ E+ + Y G+ F + APE + + + D+WS G++L I+ G P+
Sbjct: 333 VIEDNE-YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY 386
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 62/145 (42%), Gaps = 9/145 (6%)
Query: 317 VEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST 376
+ L +E+ KE F D D +G ++ EL + +G TE +++ +M +
Sbjct: 1 ADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGN 60
Query: 377 --------LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSE 427
L + + T ++++ E FR D D + ++ + E
Sbjct: 61 GTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEE 120
Query: 428 VNQYMEAGDIDGNGNIDSIEFVNLM 452
V++ + A D DG+G ++ EFV ++
Sbjct: 121 VDEMIRAADTDGDGQVNYEEFVRVL 145
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 57/141 (40%), Gaps = 11/141 (7%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
Y R LG G F +LC + R A K + D I+ +R P
Sbjct: 33 YHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESDPSDP 92
Query: 85 N-------VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNS--ERDAATVLRAIVN 135
N + +FK + + V +V E+ G L II Y R +++R ++
Sbjct: 93 NKDMVVQLIDDFKISGMNGIHVCMVFEVL-GHHLLKWIIKSNYQGLPVRCVKSIIRQVLQ 151
Query: 136 AVNVCHS-MGVMHRDLKPENF 155
++ HS ++H D+KPEN
Sbjct: 152 GLDYLHSKCKIIHTDIKPENI 172
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 11/147 (7%)
Query: 317 VEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS- 375
+ L +E+ KE F D D +GT++ EL +G TE +++ + V
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGN 60
Query: 376 ---------TLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXS 426
T + C T ++++ E FR D D + ++ +
Sbjct: 61 GTINFPEFLTXXARCXK-DTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDE 119
Query: 427 EVNQYMEAGDIDGNGNIDSIEFVNLMT 453
EV++ + DIDG+G ++ EFV T
Sbjct: 120 EVDEXIREADIDGDGQVNYEEFVQXXT 146
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 63/146 (43%), Gaps = 9/146 (6%)
Query: 316 IVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS 375
+ + L +++ KE F D D +G ++ EL + +G TE +++ ++ V
Sbjct: 1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 376 T--------LESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXS 426
L + + T +++L E FR D D + ++ +
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 427 EVNQYMEAGDIDGNGNIDSIEFVNLM 452
EV++ + D+DG+G I+ EFV +M
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVM 146
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 73/200 (36%), Gaps = 33/200 (16%)
Query: 101 VVMELCEGGDLFD-------RIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPE 153
+++EL GGDL R + D V R I +HRD+
Sbjct: 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 210
Query: 154 NFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY------------IAPEVLRRR 201
N + K+ DFG A RDI +G+Y + PE
Sbjct: 211 NCLLTCPGPGRVAKIGDFGMA---------RDIYRAGYYRKGGCAMLPVKWMPPEAFMEG 261
Query: 202 -YGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259
+ + D WS GV+L+ + S G P+ +++ + + + G DP + +
Sbjct: 262 IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG---RMDPPKNCPGPVYRI 318
Query: 260 VRRMLTKDPKRRITAAQVLE 279
+ + P+ R A +LE
Sbjct: 319 MTQCWQHQPEDRPNFAIILE 338
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 15/147 (10%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG---------SMLTEFDV--KHLM 368
L +E+ Q + E F D + +G L Y EL+ + +G ++ E+D +HLM
Sbjct: 17 LLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLM 76
Query: 369 EAVKNSSTL-ESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXXXXXXSE 427
+ + E + + P E ++ + F D D++ +++ E
Sbjct: 77 KYDDFYIVMGEKILKRDPLDEIKRAFQLF---DDDHTGKISIKNLRRVAKELGETLTDEE 133
Query: 428 VNQYMEAGDIDGNGNIDSIEFVNLMTD 454
+ +E D+DG+G I+ EF+ + TD
Sbjct: 134 LRAMIEEFDLDGDGEINENEFIAICTD 160
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 27/198 (13%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG GQFG ++ T N + A K++ KP E + + L +V+
Sbjct: 21 KKLGAGQFGEVWMATYNKHTK-VAVKTM--KPGSMSVEAFLAEANVMKTL---QHDKLVK 74
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN-AVNVCHSMGV-- 145
+ E ++++ E G L D + S+ + L +++ + + M
Sbjct: 75 LHAVVTKE-PIYIITEFMAKGSLLDFL-----KSDEGSKQPLPKLIDFSAQIAEGMAFIE 128
Query: 146 ----MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPEVL 198
+HRDL+ N I + + K+ DFG A + E+ + Y G+ F + APE +
Sbjct: 129 QRNYIHRDLRAAN---ILVSASLVCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAI 184
Query: 199 R-RRYGKEIDIWSAGVIL 215
+ + D+WS G++L
Sbjct: 185 NFGSFTIKSDVWSFGILL 202
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 73/200 (36%), Gaps = 33/200 (16%)
Query: 101 VVMELCEGGDLFD-------RIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPE 153
+++EL GGDL R + D V R I +HRD+
Sbjct: 128 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 187
Query: 154 NFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY------------IAPEVLRRR 201
N + K+ DFG A RDI +G+Y + PE
Sbjct: 188 NCLLTCPGPGRVAKIGDFGMA---------RDIYRAGYYRKGGCAMLPVKWMPPEAFMEG 238
Query: 202 -YGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259
+ + D WS GV+L+ + S G P+ +++ + + + G DP + +
Sbjct: 239 IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG---RMDPPKNCPGPVYRI 295
Query: 260 VRRMLTKDPKRRITAAQVLE 279
+ + P+ R A +LE
Sbjct: 296 MTQCWQHQPEDRPNFAIILE 315
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 64/148 (43%), Gaps = 10/148 (6%)
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
P +V E E+ + +VME+ E G L + + +++ ++ + +
Sbjct: 86 PYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 144
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY----IAPEVLR 199
+HRDL N +++ K++DFG + + Y G + APE +
Sbjct: 145 NFVHRDLAARNVLLVTQH---YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 201
Query: 200 R-RYGKEIDIWSAGVILYILLS-GVPPF 225
++ + D+WS GV+++ S G P+
Sbjct: 202 YYKFSSKSDVWSFGVLMWEAFSYGQKPY 229
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 64/148 (43%), Gaps = 10/148 (6%)
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
P +V E E+ + +VME+ E G L + + +++ ++ + +
Sbjct: 66 PYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 124
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY----IAPEVLR 199
+HRDL N +++ K++DFG + + Y G + APE +
Sbjct: 125 NFVHRDLAARNVLLVTQH---YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 181
Query: 200 R-RYGKEIDIWSAGVILYILLS-GVPPF 225
++ + D+WS GV+++ S G P+
Sbjct: 182 YYKFSSKSDVWSFGVLMWEAFSYGQKPY 209
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 64/148 (43%), Gaps = 10/148 (6%)
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
P +V E E+ + +VME+ E G L + + +++ ++ + +
Sbjct: 78 PYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 136
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY----IAPEVLR 199
+HRDL N +++ K++DFG + + Y G + APE +
Sbjct: 137 NFVHRDLAARNVLLVTQH---YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 193
Query: 200 R-RYGKEIDIWSAGVILYILLS-GVPPF 225
++ + D+WS GV+++ S G P+
Sbjct: 194 YYKFSSKSDVWSFGVLMWEAFSYGQKPY 221
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 64/148 (43%), Gaps = 10/148 (6%)
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
P +V E E+ + +VME+ E G L + + +++ ++ + +
Sbjct: 88 PYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 146
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY----IAPEVLR 199
+HRDL N +++ K++DFG + + Y G + APE +
Sbjct: 147 NFVHRDLAARNVLLVTQH---YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 203
Query: 200 R-RYGKEIDIWSAGVILYILLS-GVPPF 225
++ + D+WS GV+++ S G P+
Sbjct: 204 YYKFSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 64/148 (43%), Gaps = 10/148 (6%)
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
P +V E E+ + +VME+ E G L + + +++ ++ + +
Sbjct: 88 PYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 146
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY----IAPEVLR 199
+HRDL N +++ K++DFG + + Y G + APE +
Sbjct: 147 NFVHRDLAARNVLLVTQH---YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 203
Query: 200 R-RYGKEIDIWSAGVILYILLS-GVPPF 225
++ + D+WS GV+++ S G P+
Sbjct: 204 YYKFSSKSDVWSFGVLMWEAFSYGQKPY 231
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,535,872
Number of Sequences: 62578
Number of extensions: 561815
Number of successful extensions: 5123
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 335
Number of HSP's that attempted gapping in prelim test: 1805
Number of HSP's gapped (non-prelim): 1628
length of query: 477
length of database: 14,973,337
effective HSP length: 102
effective length of query: 375
effective length of database: 8,590,381
effective search space: 3221392875
effective search space used: 3221392875
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)