BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042825
(631 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 110/251 (43%), Gaps = 53/251 (21%)
Query: 394 GISVVHSVDFGDMAIPIQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELG 453
+S + V F +P+ L ATNNF + +G G G VYKG L+DG +V +KR
Sbjct: 15 ALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE 74
Query: 454 S----------------------VTEQGIAQFESEITVLTK----GTLGRHLFNWEEEGL 487
S V+ G +E+ ++ K G L RHL+ + +
Sbjct: 75 SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTM 134
Query: 488 EPLEWNTRLNIALDVARGDDM------------------------RVADFGLVRLVPENG 523
+ W RL I + ARG ++ DFG+ + E G
Sbjct: 135 S-MSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELG 193
Query: 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIH 583
+ + V GT GY+ PEY + GR+T K DVYSFG++L +++ R + S P +++
Sbjct: 194 QTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI--VQSLPREMVN 251
Query: 584 LATWFQKMHKN 594
LA W + H N
Sbjct: 252 LAEWAVESHNN 262
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 109/251 (43%), Gaps = 53/251 (21%)
Query: 394 GISVVHSVDFGDMAIPIQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELG 453
+S + V F +P+ L ATNNF + +G G G VYKG L+DG +V +KR
Sbjct: 15 ALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE 74
Query: 454 S----------------------VTEQGIAQFESEITVLTK----GTLGRHLFNWEEEGL 487
S V+ G +E+ ++ K G L RHL+ + +
Sbjct: 75 SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTM 134
Query: 488 EPLEWNTRLNIALDVARGDDM------------------------RVADFGLVRLVPENG 523
+ W RL I + ARG ++ DFG+ + E
Sbjct: 135 S-MSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELD 193
Query: 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIH 583
+ + V GT GY+ PEY + GR+T K DVYSFG++L +++ R + S P +++
Sbjct: 194 QTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI--VQSLPREMVN 251
Query: 584 LATWFQKMHKN 594
LA W + H N
Sbjct: 252 LAEWAVESHNN 262
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 127/279 (45%), Gaps = 64/279 (22%)
Query: 410 IQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITV 469
++ L+ A++NFS +N LGRGG G VYKG L DGT V VKR++ + G QF++E+ +
Sbjct: 30 LRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLK-EERXQGGELQFQTEVEM 88
Query: 470 LTKGTLGRHLFNWE----------------------------EEGLEPLEWNTRLNIALD 501
++ + R+L E PL+W R IAL
Sbjct: 89 ISMA-VHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 147
Query: 502 VARG--------------DDMRVA-------------DFGLVRLVPENGKHSILTKVAGT 534
ARG D++ A DFGL +L+ H + V GT
Sbjct: 148 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH-VXXAVRGT 206
Query: 535 FGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKN 594
G++APEY+ TG+ + K DV+ +G++L++LITG++ D + + L W + + K
Sbjct: 207 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 266
Query: 595 HDTFQMAIDKTIQ--LDEENLANVSTVAELGDHCCANEP 631
+ +D +Q +E + + VA L C + P
Sbjct: 267 K-KLEALVDVDLQGNYKDEEVEQLIQVALL---CTQSSP 301
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 125/279 (44%), Gaps = 64/279 (22%)
Query: 410 IQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITV 469
++ L+ A++NF +N LGRGG G VYKG L DG V VKR++ T+ G QF++E+ +
Sbjct: 22 LRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLK-EERTQGGELQFQTEVEM 80
Query: 470 LTKGTLGRHLFNWE----------------------------EEGLEPLEWNTRLNIALD 501
++ + R+L E PL+W R IAL
Sbjct: 81 ISM-AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139
Query: 502 VARG--------------DDMRVA-------------DFGLVRLVPENGKHSILTKVAGT 534
ARG D++ A DFGL +L+ H + V G
Sbjct: 140 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH-VXXAVRGX 198
Query: 535 FGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKN 594
G++APEY+ TG+ + K DV+ +G++L++LITG++ D + + L W + + K
Sbjct: 199 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 258
Query: 595 HDTFQMAIDKTIQ--LDEENLANVSTVAELGDHCCANEP 631
+ +D +Q +E + + VA L C + P
Sbjct: 259 K-KLEALVDVDLQGNYKDEEVEQLIQVALL---CTQSSP 293
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 104/230 (45%), Gaps = 65/230 (28%)
Query: 413 LRNATNNFSEE------NRLGRGGVGTVYKGELKDGTEVGVKRME--LGSVTEQGIAQFE 464
L+N TNNF E N++G GG G VYKG + + T V VK++ + TE+ QF+
Sbjct: 20 LKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFD 78
Query: 465 SEITVLTK----------------------------GTLGRHLFNWEEEGLEPLEWNTRL 496
EI V+ K G+L L + G PL W+ R
Sbjct: 79 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMRC 136
Query: 497 NIALDVARGDDM------------------------RVADFGLVRLVPENGKHSILTKVA 532
IA A G + +++DFGL R + + + +++
Sbjct: 137 KIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIV 196
Query: 533 GTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYII 582
GT Y+APE + G IT K D+YSFG++L+++ITG VD H +P+ ++
Sbjct: 197 GTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVD-EHREPQLLL 244
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 103/230 (44%), Gaps = 65/230 (28%)
Query: 413 LRNATNNFSEE------NRLGRGGVGTVYKGELKDGTEVGVKRME--LGSVTEQGIAQFE 464
L+N TNNF E N++G GG G VYKG + + T V VK++ + TE+ QF+
Sbjct: 14 LKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFD 72
Query: 465 SEITVLTK----------------------------GTLGRHLFNWEEEGLEPLEWNTRL 496
EI V+ K G+L L + G PL W+ R
Sbjct: 73 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMRC 130
Query: 497 NIALDVARGDDM------------------------RVADFGLVRLVPENGKHSILTKVA 532
IA A G + +++DFGL R + + + ++
Sbjct: 131 KIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIV 190
Query: 533 GTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYII 582
GT Y+APE + G IT K D+YSFG++L+++ITG VD H +P+ ++
Sbjct: 191 GTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVD-EHREPQLLL 238
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 103/230 (44%), Gaps = 65/230 (28%)
Query: 413 LRNATNNFSEE------NRLGRGGVGTVYKGELKDGTEVGVKRME--LGSVTEQGIAQFE 464
L+N TNNF E N++G GG G VYKG + + T V VK++ + TE+ QF+
Sbjct: 20 LKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFD 78
Query: 465 SEITVLTK----------------------------GTLGRHLFNWEEEGLEPLEWNTRL 496
EI V+ K G+L L + G PL W+ R
Sbjct: 79 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMRC 136
Query: 497 NIALDVARGDDM------------------------RVADFGLVRLVPENGKHSILTKVA 532
IA A G + +++DFGL R + + + ++
Sbjct: 137 KIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIV 196
Query: 533 GTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYII 582
GT Y+APE + G IT K D+YSFG++L+++ITG VD H +P+ ++
Sbjct: 197 GTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVD-EHREPQLLL 244
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 100/230 (43%), Gaps = 65/230 (28%)
Query: 413 LRNATNNFSEE------NRLGRGGVGTVYKGELKDGTEVGVKRME--LGSVTEQGIAQFE 464
L+N TNNF E N+ G GG G VYKG + + T V VK++ + TE+ QF+
Sbjct: 11 LKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFD 69
Query: 465 SEITVLTK----------------------------GTLGRHLFNWEEEGLEPLEWNTRL 496
EI V K G+L L + G PL W+ R
Sbjct: 70 QEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLD--GTPPLSWHXRC 127
Query: 497 NIALDVARGDDM------------------------RVADFGLVRLVPENGKHSILTKVA 532
IA A G + +++DFGL R + + +++
Sbjct: 128 KIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIV 187
Query: 533 GTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYII 582
GT Y APE + G IT K D+YSFG++L+++ITG VD H +P+ ++
Sbjct: 188 GTTAYXAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVD-EHREPQLLL 235
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 91/218 (41%), Gaps = 66/218 (30%)
Query: 416 ATNNFSEENRLGRGGVGTVYKGEL-KDGTEVGVKRMELGSV---TE--QGIAQFESEITV 469
A N E ++G+GG G V+KG L KD + V +K + LG TE + +F+ E+ +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 470 LTK----------GTLGR------------HLFNWEEEGLEPLEWNTRLNIALDVARG-- 505
++ G + L++ + P++W+ +L + LD+A G
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIE 136
Query: 506 -----------DDMR------------------VADFGLVRLVPENGKHSILTKVAGTFG 536
D+R VADFGL + HS+ + + G F
Sbjct: 137 YMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL----SQQSVHSV-SGLLGNFQ 191
Query: 537 YLAPEYIVTGR--ITAKVDVYSFGMILMDLITGRKVVD 572
++APE I T K D YSF MIL ++TG D
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 88/222 (39%), Gaps = 74/222 (33%)
Query: 416 ATNNFSEENRLGRGGVGTVYKGEL-KDGTEVGVKRMELGSV---TE--QGIAQFESEITV 469
A N E ++G+GG G V+KG L KD + V +K + LG TE + +F+ E+ +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 470 LTK--------------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVA 503
++ G L L + P++W+ +L + LD+A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLD----KAHPIKWSVKLRLMLDIA 132
Query: 504 RG-------------DDMR------------------VADFGLVRLVPENGKHSILTKVA 532
G D+R VADFG + HS+ + +
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG----TSQQSVHSV-SGLL 187
Query: 533 GTFGYLAPEYIVTGR--ITAKVDVYSFGMILMDLITGRKVVD 572
G F ++APE I T K D YSF MIL ++TG D
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 88/222 (39%), Gaps = 74/222 (33%)
Query: 416 ATNNFSEENRLGRGGVGTVYKGEL-KDGTEVGVKRMELGSV---TE--QGIAQFESEITV 469
A N E ++G+GG G V+KG L KD + V +K + LG TE + +F+ E+ +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 470 LTK--------------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVA 503
++ G L L + P++W+ +L + LD+A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLD----KAHPIKWSVKLRLMLDIA 132
Query: 504 RG-------------DDMR------------------VADFGLVRLVPENGKHSILTKVA 532
G D+R VADF L + HS+ + +
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSL----SQQSVHSV-SGLL 187
Query: 533 GTFGYLAPEYIVTGR--ITAKVDVYSFGMILMDLITGRKVVD 572
G F ++APE I T K D YSF MIL ++TG D
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 46/193 (23%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQ-------------------- 462
E +LG+G G V+ G T V +K ++ G+++ + Q
Sbjct: 14 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 73
Query: 463 FESEITVLT------------KGTLGRHL-----FNWEEEGLEPLEWNTRLNI------A 499
E I ++T KG +G++L + + + + R+N A
Sbjct: 74 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 133
Query: 500 LDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSF 557
++ G+++ +VADFGL RL+ E+ +++ + APE + GR T K DV+SF
Sbjct: 134 ANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 192
Query: 558 GMILMDLITGRKV 570
G++L +L T +V
Sbjct: 193 GILLTELTTKGRV 205
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 46/193 (23%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQ-------------------- 462
E +LG+G G V+ G T V +K ++ G+++ + Q
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 463 FESEITVLT------------KGTLGRHL-----FNWEEEGLEPLEWNTRLNI------A 499
E I ++T KG +G++L + + + + R+N A
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAA 142
Query: 500 LDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSF 557
++ G+++ +VADFGL RL+ E+ +++ + APE + GR T K DV+SF
Sbjct: 143 ANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 558 GMILMDLITGRKV 570
G++L +L T +V
Sbjct: 202 GILLTELTTKGRV 214
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 46/193 (23%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQ-------------------- 462
E +LG+G G V+ G T V +K ++ G+++ + Q
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 463 FESEITVLT------------KGTLGRHL-----FNWEEEGLEPLEWNTRLNI------A 499
E I ++T KG +G++L + + + + R+N A
Sbjct: 83 SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 142
Query: 500 LDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSF 557
++ G+++ +VADFGL RL+ E+ +++ + APE + GR T K DV+SF
Sbjct: 143 ANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 558 GMILMDLITGRKV 570
G++L +L T +V
Sbjct: 202 GILLTELTTKGRV 214
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 46/193 (23%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQ-------------------- 462
E +LG+G G V+ G T V +K ++ G+++ + Q
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVV 82
Query: 463 FESEITVLT------------KGTLGRHL-----FNWEEEGLEPLEWNTRLNI------A 499
E I ++T KG +G++L + + + + R+N A
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 142
Query: 500 LDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSF 557
++ G+++ +VADFGL RL+ E+ +++ + APE + GR T K DV+SF
Sbjct: 143 ANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 558 GMILMDLITGRKV 570
G++L +L T +V
Sbjct: 202 GILLTELTTKGRV 214
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 46/193 (23%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQ-------------------- 462
E +LG+G G V+ G T V +K ++ G+++ + Q
Sbjct: 12 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 71
Query: 463 FESEITVLT------------KGTLGRHL-----FNWEEEGLEPLEWNTRLNI------A 499
E I ++T KG +G++L + + + + R+N A
Sbjct: 72 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 131
Query: 500 LDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSF 557
++ G+++ +VADFGL RL+ E+ +++ + APE + GR T K DV+SF
Sbjct: 132 ANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 190
Query: 558 GMILMDLITGRKV 570
G++L +L T +V
Sbjct: 191 GILLTELTTKGRV 203
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 46/193 (23%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQ-------------------- 462
E +LG+G G V+ G T V +K ++ G+++ + Q
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 463 FESEITVLT------------KGTLGRHL-----FNWEEEGLEPLEWNTRLNI------A 499
E I ++T KG +G++L + + + + R+N A
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 142
Query: 500 LDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSF 557
++ G+++ +VADFGL RL+ E+ +++ + APE + GR T K DV+SF
Sbjct: 143 ANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 558 GMILMDLITGRKV 570
G++L +L T +V
Sbjct: 202 GILLTELTTKGRV 214
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 46/193 (23%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQ-------------------- 462
E +LG+G G V+ G T V +K ++ G+++ + Q
Sbjct: 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 331
Query: 463 FESEITVLT------------KGTLGRHL-----FNWEEEGLEPLEWNTRLNI------A 499
E I ++T KG G++L + + + + R+N A
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 391
Query: 500 LDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSF 557
++ G+++ +VADFGL RL+ E+ +++ + APE + GR T K DV+SF
Sbjct: 392 ANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 450
Query: 558 GMILMDLITGRKV 570
G++L +L T +V
Sbjct: 451 GILLTELTTKGRV 463
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 46/193 (23%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQ-------------------- 462
E +LG+G G V+ G T V +K ++ G+++ + Q
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 463 FESEITVLT------------KGTLGRHL-----FNWEEEGLEPLEWNTRLNI------A 499
E I ++T KG G++L + + + + R+N A
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 308
Query: 500 LDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSF 557
++ G+++ +VADFGL RL+ E+ +++ + APE + GR T K DV+SF
Sbjct: 309 ANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 367
Query: 558 GMILMDLITGRKV 570
G++L +L T +V
Sbjct: 368 GILLTELTTKGRV 380
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 46/193 (23%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQ-------------------- 462
E +LG+G G V+ G T V +K ++ G+++ + Q
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 463 FESEITVLT------------KGTLGRHL-----FNWEEEGLEPLEWNTRLNI------A 499
E I ++T KG G++L + + + + R+N A
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 308
Query: 500 LDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSF 557
++ G+++ +VADFGL RL+ E+ +++ + APE + GR T K DV+SF
Sbjct: 309 ANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 367
Query: 558 GMILMDLITGRKV 570
G++L +L T +V
Sbjct: 368 GILLTELTTKGRV 380
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 83/196 (42%), Gaps = 54/196 (27%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVL------------- 470
R+G G GTVYKG+ +V VK + + + T Q + F++E+ VL
Sbjct: 18 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 471 ----------TKGTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDD------------- 507
T+ G L++ E ++IA ARG D
Sbjct: 76 YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLK 135
Query: 508 -----------MRVADFGLVRLVPE-NGKHSILTKVAGTFGYLAPEYIV---TGRITAKV 552
+++ DFGL + +G H +++G+ ++APE I + + +
Sbjct: 136 SNNIFLHEDNTVKIGDFGLATVKSRWSGSHQ-FEQLSGSILWMAPEVIRMQDSNPYSFQS 194
Query: 553 DVYSFGMILMDLITGR 568
DVY+FG++L +L+TG+
Sbjct: 195 DVYAFGIVLYELMTGQ 210
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 46/193 (23%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQ-------------------- 462
E +LG+G G V+ G T V +K ++ G+++ + Q
Sbjct: 20 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 463 FESEITVLT------------KGTLGRHL-----FNWEEEGLEPLEWNTRLNI------A 499
E I ++T KG G++L + + + + R+N A
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRA 139
Query: 500 LDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSF 557
++ G+++ +VADFGL RL+ E+ +++ + APE + GR T K DV+SF
Sbjct: 140 ANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 198
Query: 558 GMILMDLITGRKV 570
G++L +L T +V
Sbjct: 199 GILLTELTTKGRV 211
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 46/193 (23%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQ-------------------- 462
E +LG+G G V+ G T V +K ++ G+++ + Q
Sbjct: 190 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVV 249
Query: 463 FESEITVLT------------KGTLGRHL-----FNWEEEGLEPLEWNTRLNI------A 499
E I ++T KG +G++L + + + + R+N A
Sbjct: 250 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 309
Query: 500 LDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSF 557
++ G+++ +VADFGL RL+ +N +++ + APE + GR T K DV+SF
Sbjct: 310 ANILVGENLVCKVADFGLGRLIEDN-EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 368
Query: 558 GMILMDLITGRKV 570
G++L +L T +V
Sbjct: 369 GILLTELTTKGRV 381
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 46/193 (23%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQ-------------------- 462
E +LG+G G V+ G T V +K ++ G+++ + Q
Sbjct: 16 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 75
Query: 463 FESEITVLT------------KGTLGRHL-----FNWEEEGLEPLEWNTRLNI------A 499
E I ++T KG G++L + + + + R+N A
Sbjct: 76 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 135
Query: 500 LDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSF 557
++ G+++ +VADFGL RL+ E+ +++ + APE + GR T K DV+SF
Sbjct: 136 ANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 194
Query: 558 GMILMDLITGRKV 570
G++L +L T +V
Sbjct: 195 GILLTELTTKGRV 207
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 89/221 (40%), Gaps = 66/221 (29%)
Query: 400 SVDFGDMAIPIQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQG 459
++D DM IP L N E ++G G GTV++ E G++V VK + +
Sbjct: 26 AMDGDDMDIPWCDL-----NIKE--KIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAER 77
Query: 460 IAQFESEITV----------------------------LTKGTLGRHLFNWEEEGLEPLE 491
+ +F E+ + L++G+L R L + E L+
Sbjct: 78 VNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLH--KSGAREQLD 135
Query: 492 WNTRLNIALDVARGDD--------------------------MRVADFGLVRLVPENGKH 525
RL++A DVA+G + ++V DFGL RL
Sbjct: 136 ERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS 195
Query: 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
S AGT ++APE + K DVYSFG+IL +L T
Sbjct: 196 S--KSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 52/210 (24%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQG---------------IAQFESEI 467
E +LG G G V+ T+V VK M+ GS++ + + + + +
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 79
Query: 468 T---------VLTKGTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-----------DD 507
T + KG+L L + +E +PL ++ + +A G D
Sbjct: 80 TKEPIYIITEFMAKGSLLDFLKS-DEGSKQPLP--KLIDFSAQIAEGMAFIEQRNYIHRD 136
Query: 508 MR-------------VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDV 554
+R +ADFGL R++ E+ +++ + APE I G T K DV
Sbjct: 137 LRAANILVSASLVCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDV 195
Query: 555 YSFGMILMDLITGRKVVDATHSDPEYIIHL 584
+SFG++LM+++T ++ S+PE I L
Sbjct: 196 WSFGILLMEIVTYGRIPYPGMSNPEVIRAL 225
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 88/193 (45%), Gaps = 46/193 (23%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQG----------------------- 459
E +LG+G G V+ G T V +K ++ G+++ +
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 460 -------IAQFESEITVL--TKGTLGRHL-----FNWEEEGLEPLEWNTRLNI------A 499
+ ++ S+ ++L KG +G++L + + + + R+N A
Sbjct: 83 SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 142
Query: 500 LDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSF 557
++ G+++ +VADFGL RL+ E+ +++ + APE + GR T K DV+SF
Sbjct: 143 ANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 558 GMILMDLITGRKV 570
G++L +L T +V
Sbjct: 202 GILLTELTTKGRV 214
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 89/221 (40%), Gaps = 66/221 (29%)
Query: 400 SVDFGDMAIPIQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQG 459
++D DM IP L N E ++G G GTV++ E G++V VK + +
Sbjct: 26 AMDGDDMDIPWCDL-----NIKE--KIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAER 77
Query: 460 IAQFESEITV----------------------------LTKGTLGRHLFNWEEEGLEPLE 491
+ +F E+ + L++G+L R L + E L+
Sbjct: 78 VNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLH--KSGAREQLD 135
Query: 492 WNTRLNIALDVARGDD--------------------------MRVADFGLVRLVPENGKH 525
RL++A DVA+G + ++V DFGL RL
Sbjct: 136 ERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLX 195
Query: 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
S AGT ++APE + K DVYSFG+IL +L T
Sbjct: 196 S--KXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 46/206 (22%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQG-------IAQFESEITVLTKGTLG 476
RLG G G V+ G T+V VK ++ GS++ + Q + + V +
Sbjct: 29 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 88
Query: 477 RHLFNWEEEGLE--------------PLEWNTRLNIALDVARG-----------DDMR-- 509
+ E +E L N L++A +A G D+R
Sbjct: 89 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 148
Query: 510 -----------VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFG 558
+ADFGL RL+ E+ +++ + APE I G T K DV+SFG
Sbjct: 149 NILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 207
Query: 559 MILMDLITGRKVVDATHSDPEYIIHL 584
++L +++T ++ ++PE I +L
Sbjct: 208 ILLTEIVTHGRIPYPGMTNPEVIQNL 233
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 46/193 (23%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQ-------------------- 462
E +LG+G G V+ G T V +K ++ G+++ + Q
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 463 FESEITVLT------------KGTLGRHL-----FNWEEEGLEPLEWNTRLNI------A 499
E I ++ KG +G++L + + + + R+N A
Sbjct: 83 SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 142
Query: 500 LDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSF 557
++ G+++ +VADFGL RL+ E+ +++ + APE + GR T K DV+SF
Sbjct: 143 ANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 558 GMILMDLITGRKV 570
G++L +L T +V
Sbjct: 202 GILLTELTTKGRV 214
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 87/193 (45%), Gaps = 46/193 (23%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQ-------------------- 462
E +LG+G G V+ G T V +K ++ G+++ + Q
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 463 ----------FESEITVL--TKGTLGRHL-----FNWEEEGLEPLEWNTRLNI------A 499
+ S+ ++L KG +G++L + + + + R+N A
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 142
Query: 500 LDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSF 557
++ G+++ +VADFGL RL+ E+ +++ + APE + GR T K DV+SF
Sbjct: 143 ANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 558 GMILMDLITGRKV 570
G++L +L T +V
Sbjct: 202 GILLTELTTKGRV 214
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 46/205 (22%)
Query: 425 RLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQG-------IAQFESEITVLTKGTLGR 477
RLG G G V+ G T+V VK ++ GS++ + Q + + V + +
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 478 HLFNWEEEGLE--------------PLEWNTRLNIALDVARG-----------DDMR--- 509
E +E L N L++A +A G D+R
Sbjct: 86 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 145
Query: 510 ----------VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGM 559
+ADFGL RL+ E+ +++ + APE I G T K DV+SFG+
Sbjct: 146 ILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 204
Query: 560 ILMDLITGRKVVDATHSDPEYIIHL 584
+L +++T ++ ++PE I +L
Sbjct: 205 LLTEIVTHGRIPYPGMTNPEVIQNL 229
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 46/205 (22%)
Query: 425 RLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQG-------IAQFESEITVLTKGTLGR 477
RLG G G V+ G T+V VK ++ GS++ + Q + + V + +
Sbjct: 25 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 478 HLFNWEEEGLE--------------PLEWNTRLNIALDVARG-----------DDMR--- 509
E +E L N L++A +A G D+R
Sbjct: 85 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 144
Query: 510 ----------VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGM 559
+ADFGL RL+ E+ +++ + APE I G T K DV+SFG+
Sbjct: 145 ILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 203
Query: 560 ILMDLITGRKVVDATHSDPEYIIHL 584
+L +++T ++ ++PE I +L
Sbjct: 204 LLTEIVTHGRIPYPGMTNPEVIQNL 228
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 46/193 (23%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQ-------------------- 462
E +LG+G G V+ G T V +K ++ G+++ + Q
Sbjct: 13 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 72
Query: 463 FESEITVLT------------KGTLGRHL-----FNWEEEGLEPLEWNTRLNI------A 499
E I ++T KG G++L + + + + R+N A
Sbjct: 73 SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 132
Query: 500 LDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSF 557
++ G+++ +VADFGL RL+ E+ + + + APE + GR T K DV+SF
Sbjct: 133 ANILVGENLVCKVADFGLARLI-EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 191
Query: 558 GMILMDLITGRKV 570
G++L +L T +V
Sbjct: 192 GILLTELTTKGRV 204
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGR 568
++ADFGL R++ E+ +++ + APE I G T K DV+SFG++LM+++T
Sbjct: 324 KIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYG 382
Query: 569 KVVDATHSDPEYIIHL 584
++ S+PE I L
Sbjct: 383 RIPYPGMSNPEVIRAL 398
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 48/194 (24%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEIT-------------- 468
E +LG+G G V+ G T V +K ++ G+++ + Q E+++
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYAV 247
Query: 469 -----------VLTKGTL--------GRHL-----FNWEEEGLEPLEWNTRLNI------ 498
++KG+L G++L + + + + R+N
Sbjct: 248 VSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 307
Query: 499 ALDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYS 556
A ++ G+++ +VADFGL RL+ +N +++ + APE + GR T K DV+S
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 557 FGMILMDLITGRKV 570
FG++L +L T +V
Sbjct: 367 FGILLTELTTKGRV 380
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 46/205 (22%)
Query: 425 RLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQG-------IAQFESEITVLTKGTLGR 477
RLG G G V+ G T+V VK ++ GS++ + Q + + V + +
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 478 HLFNWEEEGLE--------------PLEWNTRLNIALDVARG-----------DDMR--- 509
E +E L N L++A +A G D+R
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 139
Query: 510 ----------VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGM 559
+ADFGL RL+ E+ +++ + APE I G T K DV+SFG+
Sbjct: 140 ILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 198
Query: 560 ILMDLITGRKVVDATHSDPEYIIHL 584
+L +++T ++ ++PE I +L
Sbjct: 199 LLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 46/193 (23%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQ-------------------- 462
E +LG+G G V+ G T V +K ++ G+++ + Q
Sbjct: 20 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 463 FESEITVLT------------KGTLGRHL-----FNWEEEGLEPLEWNTRLNI------A 499
E I ++T KG G++L + + + + R+N A
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRA 139
Query: 500 LDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSF 557
++ G+++ +VADFGL RL+ E+ + + + APE + GR T K DV+SF
Sbjct: 140 ANILVGENLVCKVADFGLARLI-EDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 198
Query: 558 GMILMDLITGRKV 570
G++L +L T +V
Sbjct: 199 GILLTELTTKGRV 211
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 46/205 (22%)
Query: 425 RLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQG-------IAQFESEITVLTKGTLGR 477
RLG G G V+ G T+V VK ++ GS++ + Q + + V + +
Sbjct: 15 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 478 HLFNWEEEGLE--------------PLEWNTRLNIALDVARG-----------DDMR--- 509
E +E L N L++A +A G D+R
Sbjct: 75 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 134
Query: 510 ----------VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGM 559
+ADFGL RL+ E+ +++ + APE I G T K DV+SFG+
Sbjct: 135 ILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 193
Query: 560 ILMDLITGRKVVDATHSDPEYIIHL 584
+L +++T ++ ++PE I +L
Sbjct: 194 LLTEIVTHGRIPYPGMTNPEVIQNL 218
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 54/196 (27%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVL------------- 470
R+G G GTVYKG+ +V VK + + + T Q + F++E+ VL
Sbjct: 30 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 471 ----------TKGTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDD------------- 507
T+ G L++ E ++IA ARG D
Sbjct: 88 YSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLK 147
Query: 508 -----------MRVADFGLVRLVPE-NGKHSILTKVAGTFGYLAPEYIV---TGRITAKV 552
+++ DFGL +G H +++G+ ++APE I + + +
Sbjct: 148 SNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ-FEQLSGSILWMAPEVIRMQDSNPYSFQS 206
Query: 553 DVYSFGMILMDLITGR 568
DVY+FG++L +L+TG+
Sbjct: 207 DVYAFGIVLYELMTGQ 222
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 54/196 (27%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVL------------- 470
R+G G GTVYKG+ +V VK + + + T Q + F++E+ VL
Sbjct: 30 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 471 ----------TKGTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDD------------- 507
T+ G L++ E ++IA ARG D
Sbjct: 88 YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLK 147
Query: 508 -----------MRVADFGLVRLVPE-NGKHSILTKVAGTFGYLAPEYIV---TGRITAKV 552
+++ DFGL +G H +++G+ ++APE I + + +
Sbjct: 148 SNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ-FEQLSGSILWMAPEVIRMQDSNPYSFQS 206
Query: 553 DVYSFGMILMDLITGR 568
DVY+FG++L +L+TG+
Sbjct: 207 DVYAFGIVLYELMTGQ 222
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 46/206 (22%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQG-------IAQFESEITVLTKGTLG 476
RLG G G V+ G T+V VK ++ GS++ + Q + + V +
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 477 RHLFNWEEEGLE--------------PLEWNTRLNIALDVARG-----------DDMR-- 509
+ E +E L N L++A +A G D+R
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 138
Query: 510 -----------VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFG 558
+ADFGL RL+ E+ + + + APE I G T K DV+SFG
Sbjct: 139 NILVSDTLSCKIADFGLARLI-EDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 197
Query: 559 MILMDLITGRKVVDATHSDPEYIIHL 584
++L +++T ++ ++PE I +L
Sbjct: 198 ILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 46/206 (22%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQG-------IAQFESEITVLTKGTLG 476
RLG G G V+ G T+V VK ++ GS++ + Q + + V +
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 477 RHLFNWEEEGLE--------------PLEWNTRLNIALDVARG-----------DDMR-- 509
+ E +E L N L++A +A G D+R
Sbjct: 85 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 144
Query: 510 -----------VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFG 558
+ADFGL RL+ E+ + + + APE I G T K DV+SFG
Sbjct: 145 NILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 203
Query: 559 MILMDLITGRKVVDATHSDPEYIIHL 584
++L +++T ++ ++PE I +L
Sbjct: 204 ILLTEIVTHGRIPYPGMTNPEVIQNL 229
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 46/206 (22%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQG-------IAQFESEITVLTKGTLG 476
RLG G G V+ G T+V VK ++ GS++ + Q + + V +
Sbjct: 28 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 87
Query: 477 RHLFNWEEEGLE--------------PLEWNTRLNIALDVARG-----------DDMR-- 509
+ E +E L N L++A +A G D+R
Sbjct: 88 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 147
Query: 510 -----------VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFG 558
+ADFGL RL+ E+ + + + APE I G T K DV+SFG
Sbjct: 148 NILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 206
Query: 559 MILMDLITGRKVVDATHSDPEYIIHL 584
++L +++T ++ ++PE I +L
Sbjct: 207 ILLTEIVTHGRIPYPGMTNPEVIQNL 232
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 46/206 (22%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQG-------IAQFESEITVLTKGTLG 476
RLG G G V+ G T+V VK ++ GS++ + Q + + V +
Sbjct: 27 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 86
Query: 477 RHLFNWEEEGLE--------------PLEWNTRLNIALDVARG-----------DDMR-- 509
+ E +E L N L++A +A G D+R
Sbjct: 87 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 146
Query: 510 -----------VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFG 558
+ADFGL RL+ E+ + + + APE I G T K DV+SFG
Sbjct: 147 NILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 205
Query: 559 MILMDLITGRKVVDATHSDPEYIIHL 584
++L +++T ++ ++PE I +L
Sbjct: 206 ILLTEIVTHGRIPYPGMTNPEVIQNL 231
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 86/193 (44%), Gaps = 46/193 (23%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQ-------------------- 462
E +LG+G G V+ G T V +K ++ G+++ + Q
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 463 ----------FESEITVL--TKGTLGRHL-----FNWEEEGLEPLEWNTRLNI------A 499
+ S+ ++L KG +G++L + + + + R+N A
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 142
Query: 500 LDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSF 557
++ G+++ +VADFGL RL+ E+ + + + APE + GR T K DV+SF
Sbjct: 143 ANILVGENLVCKVADFGLARLI-EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 558 GMILMDLITGRKV 570
G++L +L T +V
Sbjct: 202 GILLTELTTKGRV 214
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 46/206 (22%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQG-------IAQFESEITVLTKGTLG 476
RLG G G V+ G T+V VK ++ GS++ + Q + + V +
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 477 RHLFNWEEEGLE--------------PLEWNTRLNIALDVARG-----------DDMR-- 509
+ E +E L N L++A +A G D+R
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 138
Query: 510 -----------VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFG 558
+ADFGL RL+ E+ + + + APE I G T K DV+SFG
Sbjct: 139 NILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 197
Query: 559 MILMDLITGRKVVDATHSDPEYIIHL 584
++L +++T ++ ++PE I +L
Sbjct: 198 ILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAK-VDVY 555
N+ LD D+++++DFGL + N + +L K+ GT Y+APE + A+ VDV+
Sbjct: 134 NLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 556 SFGMILMDLITG 567
S G++L ++ G
Sbjct: 192 SCGIVLTAMLAG 203
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 46/205 (22%)
Query: 425 RLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQG-------IAQFESEITVLTKGTLGR 477
RLG G G V+ G T+V VK ++ GS++ + Q + + V + +
Sbjct: 22 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 478 HLFNWEEEGLE--------------PLEWNTRLNIALDVARG-----------DDMR--- 509
E +E L N L++A +A G D+R
Sbjct: 82 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 141
Query: 510 ----------VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGM 559
+ADFGL RL+ E+ + + + APE I G T K DV+SFG+
Sbjct: 142 ILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 200
Query: 560 ILMDLITGRKVVDATHSDPEYIIHL 584
+L +++T ++ ++PE I +L
Sbjct: 201 LLTEIVTHGRIPYPGMTNPEVIQNL 225
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 46/205 (22%)
Query: 425 RLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQG-------IAQFESEITVLTKGTLGR 477
RLG G G V+ G T+V VK ++ GS++ + Q + + V + +
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 478 HLFNWEEEGLE--------------PLEWNTRLNIALDVARG------------------ 505
E +E L N L++A +A G
Sbjct: 76 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAAN 135
Query: 506 ----DDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGM 559
D + ++ADFGL RL+ E+ +++ + APE I G T K DV+SFG+
Sbjct: 136 ILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 194
Query: 560 ILMDLITGRKVVDATHSDPEYIIHL 584
+L +++T ++ ++PE I +L
Sbjct: 195 LLTEIVTHGRIPYPGMTNPEVIQNL 219
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAK-VDVY 555
N+ LD D+++++DFGL + N + +L K+ GT Y+APE + A+ VDV+
Sbjct: 135 NLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 556 SFGMILMDLITG 567
S G++L ++ G
Sbjct: 193 SCGIVLTAMLAG 204
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAK-VDVY 555
N+ LD D+++++DFGL + N + +L K+ GT Y+APE + A+ VDV+
Sbjct: 134 NLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 556 SFGMILMDLITG 567
S G++L ++ G
Sbjct: 192 SCGIVLTAMLAG 203
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAK-VDVY 555
N+ LD D+++++DFGL + N + +L K+ GT Y+APE + A+ VDV+
Sbjct: 134 NLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 556 SFGMILMDLITG 567
S G++L ++ G
Sbjct: 192 SCGIVLTAMLAG 203
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 82/192 (42%), Gaps = 46/192 (23%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGI---AQF----------------- 463
RLG G G V+ G T+V +K ++ G+++ + AQ
Sbjct: 15 KRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 464 ESEITVLT----KGTLGRHLFNWEEEGLE-------------PLEWNTRLNIA------- 499
E I ++T KG+L L + E L+ + + R+N
Sbjct: 75 EEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSA 134
Query: 500 -LDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFG 558
+ V G ++ADFGL RL+ E+ + + + APE + GR T K DV+SFG
Sbjct: 135 NILVGNGLICKIADFGLARLI-EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 193
Query: 559 MILMDLITGRKV 570
++L +L+T +V
Sbjct: 194 ILLTELVTKGRV 205
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAK-VDVY 555
N+ LD D+++++DFGL + N + +L K+ GT Y+APE + A+ VDV+
Sbjct: 133 NLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 190
Query: 556 SFGMILMDLITG 567
S G++L ++ G
Sbjct: 191 SCGIVLTAMLAG 202
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAK-VDVY 555
N+ LD D+++++DFGL + N + +L K+ GT Y+APE + A+ VDV+
Sbjct: 134 NLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 556 SFGMILMDLITG 567
S G++L ++ G
Sbjct: 192 SCGIVLTAMLAG 203
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAK-VDVY 555
N+ LD D+++++DFGL + N + +L K+ GT Y+APE + A+ VDV+
Sbjct: 134 NLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 556 SFGMILMDLITG 567
S G++L ++ G
Sbjct: 192 SCGIVLTAMLAG 203
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAK-VDVY 555
N+ LD D+++++DFGL + N + +L K+ GT Y+APE + A+ VDV+
Sbjct: 134 NLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 556 SFGMILMDLITG 567
S G++L ++ G
Sbjct: 192 SCGIVLTAMLAG 203
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAK-VDVY 555
N+ LD D+++++DFGL + N + +L K+ GT Y+APE + A+ VDV+
Sbjct: 134 NLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 556 SFGMILMDLITG 567
S G++L ++ G
Sbjct: 192 SCGIVLTAMLAG 203
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAK-VDVY 555
N+ LD D+++++DFGL + N + +L K+ GT Y+APE + A+ VDV+
Sbjct: 135 NLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 556 SFGMILMDLITG 567
S G++L ++ G
Sbjct: 193 SCGIVLTAMLAG 204
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 46/205 (22%)
Query: 425 RLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQG-------IAQFESEITVLTKGTLGR 477
RLG G G V+ G T+V VK ++ GS++ + Q + + V + +
Sbjct: 21 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 478 HLFNWEEEGLE--------------PLEWNTRLNIALDVARG-----------DDMR--- 509
E +E L N L++A +A G D+R
Sbjct: 81 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 140
Query: 510 ----------VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGM 559
+ADFGL RL+ E+ + + + APE I G T K DV+SFG+
Sbjct: 141 ILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 199
Query: 560 ILMDLITGRKVVDATHSDPEYIIHL 584
+L +++T ++ ++PE I +L
Sbjct: 200 LLTEIVTHGRIPYPGMTNPEVIQNL 224
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAK-VDVY 555
N+ LD D+++++DFGL + N + +L K+ GT Y+APE + A+ VDV+
Sbjct: 135 NLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 556 SFGMILMDLITG 567
S G++L ++ G
Sbjct: 193 SCGIVLTAMLAG 204
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAK-VDVY 555
N+ LD D+++++DFGL + N + +L K+ GT Y+APE + A+ VDV+
Sbjct: 135 NLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 556 SFGMILMDLITG 567
S G++L ++ G
Sbjct: 193 SCGIVLTAMLAG 204
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAK-VDVY 555
N+ LD D+++++DFGL + N + +L K+ GT Y+APE + A+ VDV+
Sbjct: 135 NLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 556 SFGMILMDLITG 567
S G++L ++ G
Sbjct: 193 SCGIVLTAMLAG 204
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 46/205 (22%)
Query: 425 RLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQG-------IAQFESEITVLTKGTLGR 477
RLG G G V+ G T+V VK ++ GS++ + Q + + V + +
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 478 HLFNWEEEGLE--------------PLEWNTRLNIALDVARG-----------DDMR--- 509
E +E L N L++A +A G D+R
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 139
Query: 510 ----------VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGM 559
+ADFGL RL+ E+ + + + APE I G T K DV+SFG+
Sbjct: 140 ILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 198
Query: 560 ILMDLITGRKVVDATHSDPEYIIHL 584
+L +++T ++ ++PE I +L
Sbjct: 199 LLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAK-VDVY 555
N+ LD D+++++DFGL + N + +L K+ GT Y+APE + A+ VDV+
Sbjct: 135 NLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 556 SFGMILMDLITG 567
S G++L ++ G
Sbjct: 193 SCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAK-VDVY 555
N+ LD D+++++DFGL + N + +L K+ GT Y+APE + A+ VDV+
Sbjct: 135 NLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 556 SFGMILMDLITG 567
S G++L ++ G
Sbjct: 193 SCGIVLTAMLAG 204
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAK-VDVY 555
N+ LD D+++++DFGL + N + +L K+ GT Y+APE + A+ VDV+
Sbjct: 134 NLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 556 SFGMILMDLITG 567
S G++L ++ G
Sbjct: 192 SCGIVLTAMLAG 203
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAK-VDVY 555
N+ LD D+++++DFGL + N + +L K+ GT Y+APE + A+ VDV+
Sbjct: 134 NLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 191
Query: 556 SFGMILMDLITG 567
S G++L ++ G
Sbjct: 192 SCGIVLTAMLAG 203
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAK-VDVY 555
N+ LD D+++++DFGL + N + +L K+ GT Y+APE + A+ VDV+
Sbjct: 134 NLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 191
Query: 556 SFGMILMDLITG 567
S G++L ++ G
Sbjct: 192 SCGIVLTAMLAG 203
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAK-VDVY 555
N+ LD D+++++DFGL + N + +L K+ GT Y+APE + A+ VDV+
Sbjct: 134 NLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 191
Query: 556 SFGMILMDLITG 567
S G++L ++ G
Sbjct: 192 SCGIVLTAMLAG 203
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAK-VDVY 555
N+ LD D+++++DFGL + N + +L K+ GT Y+APE + A+ VDV+
Sbjct: 134 NLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 191
Query: 556 SFGMILMDLITG 567
S G++L ++ G
Sbjct: 192 SCGIVLTAMLAG 203
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAK-VDVY 555
N+ LD D+++++DFGL + N + +L K+ GT Y+APE + A+ VDV+
Sbjct: 135 NLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 192
Query: 556 SFGMILMDLITG 567
S G++L ++ G
Sbjct: 193 SCGIVLTAMLAG 204
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 507 DMRVADFGLVRLV-PENGKHSILTKVAGTFGYLAPEYIVTGR-ITAKVDVYSFGMILMDL 564
D+++ DFGL R+ PE+ LT+ T Y APE ++ + T +D++S G IL ++
Sbjct: 182 DLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
Query: 565 ITGRKVVDATH 575
++ R + H
Sbjct: 242 LSNRPIFPGKH 252
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 21/126 (16%)
Query: 111 GTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEF---FSAYEANISGTIPDFIGTDTF 167
G P SM + + N L G IP +GS+ + + +ISG+IPD +G
Sbjct: 619 GHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVG--DL 676
Query: 168 PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTG---------IFPVS 218
L+ LDL +N L G IP + +S L+ L ++ L +N L+G FP +
Sbjct: 677 RGLNILDLSSNKLDGRIPQA-------MSALTMLTEIDLSNNNLSGPIPEMGQFETFPPA 729
Query: 219 SFNNHP 224
F N+P
Sbjct: 730 KFLNNP 735
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 18/121 (14%)
Query: 102 IELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEF---FSAYEANISGTI 158
+ LQ+ G +PP L S + ++L N L G IPS +GSL + + G I
Sbjct: 396 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 455
Query: 159 PD---FIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIF 215
P ++ T L L L N+L G IPS +SN + L +SL +N+LTG
Sbjct: 456 PQELMYVKT-----LETLILDFNDLTGEIPSG-------LSNCTNLNWISLSNNRLTGEI 503
Query: 216 P 216
P
Sbjct: 504 P 504
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 20/143 (13%)
Query: 95 DDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSL-VGSLEFFSAYEAN 153
D + ++++ G + + + ++ + +NQ GPIP L + SL++ S E
Sbjct: 218 DCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENK 277
Query: 154 ISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFG------------------MPFADI 195
+G IPDF+ + L+ LDL N+ G +P FG +P +
Sbjct: 278 FTGEIPDFL-SGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTL 336
Query: 196 SNLSTLEDLSLGHNKLTGIFPVS 218
+ L+ L L N+ +G P S
Sbjct: 337 LKMRGLKVLDLSFNEFSGELPES 359
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 110 KGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGS---LEFFSAYEANISGTIPDFIGTDT 166
+G +P L + ++ + L+ N L G IPS + + L + S ++G IP +IG
Sbjct: 452 EGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGR-- 509
Query: 167 FPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPK 225
L+ L L NN+ G IP A++ + +L L L N G P + F K
Sbjct: 510 LENLAILKLSNNSFSGNIP-------AELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGK 561
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 12/127 (9%)
Query: 94 SDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPS---LVGSLEFFSAY 150
S+ ++ ++ L GT+P L LS + + L N L G IP V +LE
Sbjct: 412 SNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 471
Query: 151 EANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNK 210
+++G IP G L+++ L NN L G IP G L L L L +N
Sbjct: 472 FNDLTGEIPS--GLSNCTNLNWISLSNNRLTGEIPKWIG-------RLENLAILKLSNNS 522
Query: 211 LTGIFPV 217
+G P
Sbjct: 523 FSGNIPA 529
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 95 DDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEAN- 153
++G + +++ G +P + + + ++ L +N + G IP VG L + + +
Sbjct: 627 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSS 686
Query: 154 --ISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIP 185
+ G IP + T L+ +DL NNNL G IP
Sbjct: 687 NKLDGRIPQAMSALTM--LTEIDLSNNNLSGPIP 718
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 107 QNRKGTVP-PILKKLSSMAVMYLENNQLRGPIP----SLVGSLEFFSAYEANISGTIPDF 161
N G +P L K+ + V+ L N+ G +P +L SL N SG I
Sbjct: 325 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 384
Query: 162 IGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVS 218
+ + L L L NN G IP + +SN S L L L N L+G P S
Sbjct: 385 LCQNPKNTLQELYLQNNGFTGKIPPT-------LSNCSELVSLHLSFNYLSGTIPSS 434
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 102 IELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFF 147
++L G +P + L+ + + L NN L GPIP + G E F
Sbjct: 682 LDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETF 726
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Query: 81 SDPDPCQWSHVICSDDGQVTNIELQDQNRK---GTVPPILKKLSSMAVMYLENNQLRGPI 137
S+ +PC + V C DD +VT+I+L + V L L+ + ++L N+ + G +
Sbjct: 32 SNKNPCTFDGVTCRDD-KVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSV 90
Query: 138 PSL--VGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADI 195
SL ++SG + + L +L++ +N L S G+
Sbjct: 91 SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL----- 145
Query: 196 SNLSTLEDLSLGHNKLTG 213
L++LE L L N ++G
Sbjct: 146 -KLNSLEVLDLSANSISG 162
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 21/126 (16%)
Query: 111 GTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEF---FSAYEANISGTIPDFIGTDTF 167
G P SM + + N L G IP +GS+ + + +ISG+IPD +G
Sbjct: 622 GHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVG--DL 679
Query: 168 PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTG---------IFPVS 218
L+ LDL +N L G IP + +S L+ L ++ L +N L+G FP +
Sbjct: 680 RGLNILDLSSNKLDGRIPQA-------MSALTMLTEIDLSNNNLSGPIPEMGQFETFPPA 732
Query: 219 SFNNHP 224
F N+P
Sbjct: 733 KFLNNP 738
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 18/121 (14%)
Query: 102 IELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEF---FSAYEANISGTI 158
+ LQ+ G +PP L S + ++L N L G IPS +GSL + + G I
Sbjct: 399 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 458
Query: 159 PD---FIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIF 215
P ++ T L L L N+L G IPS +SN + L +SL +N+LTG
Sbjct: 459 PQELMYVKT-----LETLILDFNDLTGEIPSG-------LSNCTNLNWISLSNNRLTGEI 506
Query: 216 P 216
P
Sbjct: 507 P 507
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 20/143 (13%)
Query: 95 DDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSL-VGSLEFFSAYEAN 153
D + ++++ G + + + ++ + +NQ GPIP L + SL++ S E
Sbjct: 221 DCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENK 280
Query: 154 ISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFG------------------MPFADI 195
+G IPDF+ + L+ LDL N+ G +P FG +P +
Sbjct: 281 FTGEIPDFL-SGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTL 339
Query: 196 SNLSTLEDLSLGHNKLTGIFPVS 218
+ L+ L L N+ +G P S
Sbjct: 340 LKMRGLKVLDLSFNEFSGELPES 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 12/131 (9%)
Query: 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGS---LEFFSAYEANI 154
++ +++L +G +P L + ++ + L+ N L G IPS + + L + S +
Sbjct: 443 KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRL 502
Query: 155 SGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGI 214
+G IP +IG L+ L L NN+ G IP A++ + +L L L N G
Sbjct: 503 TGEIPKWIGR--LENLAILKLSNNSFSGNIP-------AELGDCRSLIWLDLNTNLFNGT 553
Query: 215 FPVSSFNNHPK 225
P + F K
Sbjct: 554 IPAAMFKQSGK 564
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 12/127 (9%)
Query: 94 SDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPS---LVGSLEFFSAY 150
S+ ++ ++ L GT+P L LS + + L N L G IP V +LE
Sbjct: 415 SNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 474
Query: 151 EANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNK 210
+++G IP G L+++ L NN L G IP G L L L L +N
Sbjct: 475 FNDLTGEIPS--GLSNCTNLNWISLSNNRLTGEIPKWIG-------RLENLAILKLSNNS 525
Query: 211 LTGIFPV 217
+G P
Sbjct: 526 FSGNIPA 532
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 95 DDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEAN- 153
++G + +++ G +P + + + ++ L +N + G IP VG L + + +
Sbjct: 630 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSS 689
Query: 154 --ISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIP 185
+ G IP + T L+ +DL NNNL G IP
Sbjct: 690 NKLDGRIPQAMSALTM--LTEIDLSNNNLSGPIP 721
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 107 QNRKGTVP-PILKKLSSMAVMYLENNQLRGPIP----SLVGSLEFFSAYEANISGTIPDF 161
N G +P L K+ + V+ L N+ G +P +L SL N SG I
Sbjct: 328 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 387
Query: 162 IGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVS 218
+ + L L L NN G IP + +SN S L L L N L+G P S
Sbjct: 388 LCQNPKNTLQELYLQNNGFTGKIPPT-------LSNCSELVSLHLSFNYLSGTIPSS 437
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 102 IELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFF 147
++L G +P + L+ + + L NN L GPIP + G E F
Sbjct: 685 LDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETF 729
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Query: 81 SDPDPCQWSHVICSDDGQVTNIELQDQNRK---GTVPPILKKLSSMAVMYLENNQLRGPI 137
S+ +PC + V C DD +VT+I+L + V L L+ + ++L N+ + G +
Sbjct: 35 SNKNPCTFDGVTCRDD-KVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSV 93
Query: 138 PSL--VGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADI 195
SL ++SG + + L +L++ +N L S G+
Sbjct: 94 SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL----- 148
Query: 196 SNLSTLEDLSLGHNKLTG 213
L++LE L L N ++G
Sbjct: 149 -KLNSLEVLDLSANSISG 165
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 62/200 (31%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------- 472
R+G G GTVYKG K +V VK + + + T Q + F++E+ VL K
Sbjct: 16 QRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 473 ----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDD--------- 507
+L HL E + E ++IA A+G D
Sbjct: 74 YSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKSIIH 129
Query: 508 ---------------MRVADFGLVRLVPE-NGKHSILTKVAGTFGYLAPEYIVT---GRI 548
+++ DFGL + +G H +++G+ ++APE I
Sbjct: 130 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ-FEQLSGSILWMAPEVIRMQDKNPY 188
Query: 549 TAKVDVYSFGMILMDLITGR 568
+ + DVY+FG++L +L+TG+
Sbjct: 189 SFQSDVYAFGIVLYELMTGQ 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 62/200 (31%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------- 472
R+G G GTVYKG+ +V VK + + + T Q + F++E+ VL K
Sbjct: 19 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 473 ----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDD--------- 507
+L HL E + E ++IA A+G D
Sbjct: 77 YSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKSIIH 132
Query: 508 ---------------MRVADFGLVRLVPE-NGKHSILTKVAGTFGYLAPEYIVT---GRI 548
+++ DFGL + +G H +++G+ ++APE I
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ-FEQLSGSILWMAPEVIRMQDKNPY 191
Query: 549 TAKVDVYSFGMILMDLITGR 568
+ + DVY+FG++L +L+TG+
Sbjct: 192 SFQSDVYAFGIVLYELMTGQ 211
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 62/200 (31%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------- 472
R+G G GTVYKG+ +V VK + + + T Q + F++E+ VL K
Sbjct: 19 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 473 ----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDD--------- 507
+L HL E + E ++IA A+G D
Sbjct: 77 YSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKSIIH 132
Query: 508 ---------------MRVADFGLVRLVPE-NGKHSILTKVAGTFGYLAPEYIVT---GRI 548
+++ DFGL + +G H +++G+ ++APE I
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ-FEQLSGSILWMAPEVIRMQDKNPY 191
Query: 549 TAKVDVYSFGMILMDLITGR 568
+ + DVY+FG++L +L+TG+
Sbjct: 192 SFQSDVYAFGIVLYELMTGQ 211
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 62/200 (31%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------- 472
R+G G GTVYKG K +V VK + + + T Q + F++E+ VL K
Sbjct: 14 QRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 473 ----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDD--------- 507
+L HL E + E ++IA A+G D
Sbjct: 72 YSTAPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKSIIH 127
Query: 508 ---------------MRVADFGLVRLVPE-NGKHSILTKVAGTFGYLAPEYIVT---GRI 548
+++ DFGL + +G H +++G+ ++APE I
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ-FEQLSGSILWMAPEVIRMQDKNPY 186
Query: 549 TAKVDVYSFGMILMDLITGR 568
+ + DVY+FG++L +L+TG+
Sbjct: 187 SFQSDVYAFGIVLYELMTGQ 206
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 62/200 (31%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------- 472
R+G G GTVYKG K +V VK + + + T Q + F++E+ VL K
Sbjct: 14 QRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 473 ----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDD--------- 507
+L HL E + E ++IA A+G D
Sbjct: 72 YSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKSIIH 127
Query: 508 ---------------MRVADFGLVRLVPE-NGKHSILTKVAGTFGYLAPEYIVT---GRI 548
+++ DFGL + +G H +++G+ ++APE I
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ-FEQLSGSILWMAPEVIRMQDKNPY 186
Query: 549 TAKVDVYSFGMILMDLITGR 568
+ + DVY+FG++L +L+TG+
Sbjct: 187 SFQSDVYAFGIVLYELMTGQ 206
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 62/200 (31%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------- 472
R+G G GTVYKG K +V VK + + + T Q + F++E+ VL K
Sbjct: 41 QRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 473 ----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDD--------- 507
+L HL E + E ++IA A+G D
Sbjct: 99 YSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKSIIH 154
Query: 508 ---------------MRVADFGLVRLVPE-NGKHSILTKVAGTFGYLAPEYIV---TGRI 548
+++ DFGL + +G H +++G+ ++APE I
Sbjct: 155 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ-FEQLSGSILWMAPEVIRMQDKNPY 213
Query: 549 TAKVDVYSFGMILMDLITGR 568
+ + DVY+FG++L +L+TG+
Sbjct: 214 SFQSDVYAFGIVLYELMTGQ 233
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 47/193 (24%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQG---------------------IAQ 462
RLG G G V+ G + T+V VK ++ G+++ Q +
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 463 FESEITVLT----KGTL---------GR----HLFNWEEEGLEPLEWNTRLNI------A 499
E I ++T KG+L G+ L ++ + E + + R N A
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRA 138
Query: 500 LDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSF 557
+V + + ++ADFGL R++ E+ +++ + APE I G T K DV+SF
Sbjct: 139 ANVLVSESLMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSF 197
Query: 558 GMILMDLITGRKV 570
G++L +++T K+
Sbjct: 198 GILLYEIVTYGKI 210
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 62/200 (31%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------- 472
R+G G GTVYKG+ +V VK + + + T Q + F++E+ VL K
Sbjct: 42 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 473 ----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDD--------- 507
+L HL E + E ++IA A+G D
Sbjct: 100 YSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKSIIH 155
Query: 508 ---------------MRVADFGLVRLVPE-NGKHSILTKVAGTFGYLAPEYIV---TGRI 548
+++ DFGL + +G H +++G+ ++APE I
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ-FEQLSGSILWMAPEVIRMQDKNPY 214
Query: 549 TAKVDVYSFGMILMDLITGR 568
+ + DVY+FG++L +L+TG+
Sbjct: 215 SFQSDVYAFGIVLYELMTGQ 234
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 508 MRVADFGLVRLVPENGKHSILTK-VAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
++V DFG+ R + ++G T V GT YL+PE + A+ DVYS G +L +++T
Sbjct: 155 VKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 567 G 567
G
Sbjct: 215 G 215
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 13/114 (11%)
Query: 107 QNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFS----AYEANISGTIPDFI 162
N G +PP + KL+ + +Y+ + + G IP + ++ +Y A +SGT+P I
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNA-LSGTLPPSI 145
Query: 163 GTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP 216
+ P L + N + G IP S+G S L T +++ N+LTG P
Sbjct: 146 --SSLPNLVGITFDGNRISGAIPDSYG----SFSKLFT--SMTISRNRLTGKIP 191
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 46/117 (39%), Gaps = 8/117 (6%)
Query: 100 TNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIP 159
T++ + G +PP L+ +A + L N L G L GS + +
Sbjct: 177 TSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF 235
Query: 160 DFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP 216
D L+ LDL NN + GT+P ++ L L L++ N L G P
Sbjct: 236 DLGKVGLSKNLNGLDLRNNRIYGTLPQG-------LTQLKFLHSLNVSFNNLCGEIP 285
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 508 MRVADFGLVRLVPENGKHSILTK-VAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
++V DFG+ R + ++G T V GT YL+PE + A+ DVYS G +L +++T
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 567 G 567
G
Sbjct: 215 G 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 508 MRVADFGLVRLVPENGKHSILTK-VAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
++V DFG+ R + ++G T V GT YL+PE + A+ DVYS G +L +++T
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 567 G 567
G
Sbjct: 215 G 215
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 508 MRVADFGLVRLVPENGKHSILTK-VAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
++V DFG+ R + ++G T V GT YL+PE + A+ DVYS G +L +++T
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 567 G 567
G
Sbjct: 215 G 215
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 508 MRVADFGLVRLVPENGKHSILTK-VAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
++V DFG+ R + ++G T V GT YL+PE + A+ DVYS G +L +++T
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 567 G 567
G
Sbjct: 215 G 215
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
+++ DFGLV + +GK T+ GT Y++PE I + +VD+Y+ G+IL +L+
Sbjct: 175 VKIGDFGLVTSLKNDGKR---TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 508 MRVADFGLVRLVPENGKHSILTK-VAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
++V DFG+ R + ++G T V GT YL+PE + A+ DVYS G +L +++T
Sbjct: 172 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 231
Query: 567 G 567
G
Sbjct: 232 G 232
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 82/200 (41%), Gaps = 62/200 (31%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------- 472
R+G G GTVYKG K +V VK + + + T Q + F++E+ VL K
Sbjct: 14 QRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 473 ----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDD--------- 507
+L HL E + E ++IA A+G D
Sbjct: 72 YSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKSIIH 127
Query: 508 ---------------MRVADFGLVRLVPE-NGKHSILTKVAGTFGYLAPEYIVT---GRI 548
+++ DFGL +G H +++G+ ++APE I
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ-FEQLSGSILWMAPEVIRMQDKNPY 186
Query: 549 TAKVDVYSFGMILMDLITGR 568
+ + DVY+FG++L +L+TG+
Sbjct: 187 SFQSDVYAFGIVLYELMTGQ 206
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 48/203 (23%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQG---------------IAQFESEI 467
E +LG G G V+ T+V VK M+ GS++ + + + + +
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 246
Query: 468 T---------VLTKGTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-----------DD 507
T + KG+L L + +E +PL ++ + +A G D
Sbjct: 247 TKEPIYIITEFMAKGSLLDFLKS-DEGSKQPLP--KLIDFSAQIAEGMAFIEQRNYIHRD 303
Query: 508 MRVADF----GLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYSFGMIL 561
+R A+ LV + + G L +V F + APE I G T K DV+SFG++L
Sbjct: 304 LRAANILVSASLVCKIADFG----LARVGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL 359
Query: 562 MDLITGRKVVDATHSDPEYIIHL 584
M+++T ++ S+PE I L
Sbjct: 360 MEIVTYGRIPYPGMSNPEVIRAL 382
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 82/200 (41%), Gaps = 62/200 (31%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------- 472
R+G G GTVYKG K +V VK + + + T Q + F++E+ VL K
Sbjct: 34 QRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 473 ----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDD--------- 507
+L HL E + E ++IA A+G D
Sbjct: 92 YSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKSIIH 147
Query: 508 ---------------MRVADFGLVRLVPE-NGKHSILTKVAGTFGYLAPEYIV---TGRI 548
+++ DFGL +G H +++G+ ++APE I
Sbjct: 148 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ-FEQLSGSILWMAPEVIRMQDKNPY 206
Query: 549 TAKVDVYSFGMILMDLITGR 568
+ + DVY+FG++L +L+TG+
Sbjct: 207 SFQSDVYAFGIVLYELMTGQ 226
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 62/200 (31%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------- 472
R+G G GTVYKG+ +V VK + + + T Q + F++E+ VL K
Sbjct: 42 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 473 ----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDD--------- 507
+L HL E + E ++IA A+G D
Sbjct: 100 YSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKSIIH 155
Query: 508 ---------------MRVADFGLVRLVPE-NGKHSILTKVAGTFGYLAPEYIV---TGRI 548
+++ DFGL +G H +++G+ ++APE I
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ-FEQLSGSILWMAPEVIRMQDKNPY 214
Query: 549 TAKVDVYSFGMILMDLITGR 568
+ + DVY+FG++L +L+TG+
Sbjct: 215 SFQSDVYAFGIVLYELMTGQ 234
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 500 LDVARGDDMRVADFGLVRLVPENGKHSILTKVAGT-FGYLAPEYIVTGRITAKVDVYSFG 558
L +A D +++ DFGL+R +P+N H ++ + F + APE + T + D + FG
Sbjct: 142 LLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 201
Query: 559 MILMDLIT 566
+ L ++ T
Sbjct: 202 VTLWEMFT 209
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 500 LDVARGDDMRVADFGLVRLVPENGKHSILTKVAGT-FGYLAPEYIVTGRITAKVDVYSFG 558
L +A D +++ DFGL+R +P+N H ++ + F + APE + T + D + FG
Sbjct: 146 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 205
Query: 559 MILMDLIT 566
+ L ++ T
Sbjct: 206 VTLWEMFT 213
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 500 LDVARGDDMRVADFGLVRLVPENGKHSILTKVAGT-FGYLAPEYIVTGRITAKVDVYSFG 558
L +A D +++ DFGL+R +P+N H ++ + F + APE + T + D + FG
Sbjct: 152 LLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 211
Query: 559 MILMDLIT 566
+ L ++ T
Sbjct: 212 VTLWEMFT 219
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFGL R K S AG + ++APE I + DV+S+G++L +L+TG
Sbjct: 155 LKITDFGLAREWHRTTKMS----AAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYS 556
NI LD +R++D GL VPE +I +V GT GY+APE + R T D ++
Sbjct: 316 NILLD--DHGHIRISDLGLAVHVPEG--QTIKGRV-GTVGYMAPEVVKNERYTFSPDWWA 370
Query: 557 FGMILMDLITGR 568
G +L ++I G+
Sbjct: 371 LGCLLYEMIAGQ 382
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 500 LDVARGDDMRVADFGLVRLVPENGKHSILTKVAGT-FGYLAPEYIVTGRITAKVDVYSFG 558
L +A D +++ DFGL+R +P+N H ++ + F + APE + T + D + FG
Sbjct: 146 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 205
Query: 559 MILMDLIT 566
+ L ++ T
Sbjct: 206 VTLWEMFT 213
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYS 556
NI LD +R++D GL VPE +I +V GT GY+APE + R T D ++
Sbjct: 316 NILLD--DHGHIRISDLGLAVHVPEG--QTIKGRV-GTVGYMAPEVVKNERYTFSPDWWA 370
Query: 557 FGMILMDLITGR 568
G +L ++I G+
Sbjct: 371 LGCLLYEMIAGQ 382
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 500 LDVARGDDMRVADFGLVRLVPENGKHSILTKVAGT-FGYLAPEYIVTGRITAKVDVYSFG 558
L +A D +++ DFGL+R +P+N H ++ + F + APE + T + D + FG
Sbjct: 142 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 201
Query: 559 MILMDLIT 566
+ L ++ T
Sbjct: 202 VTLWEMFT 209
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 500 LDVARGDDMRVADFGLVRLVPENGKHSILTKVAGT-FGYLAPEYIVTGRITAKVDVYSFG 558
L +A D +++ DFGL+R +P+N H ++ + F + APE + T + D + FG
Sbjct: 142 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 201
Query: 559 MILMDLIT 566
+ L ++ T
Sbjct: 202 VTLWEMFT 209
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 500 LDVARGDDMRVADFGLVRLVPENGKHSILTKVAGT-FGYLAPEYIVTGRITAKVDVYSFG 558
L +A D +++ DFGL+R +P+N H ++ + F + APE + T + D + FG
Sbjct: 152 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 211
Query: 559 MILMDLIT 566
+ L ++ T
Sbjct: 212 VTLWEMFT 219
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
+++ DFGLV + +GK + GT Y++PE I + +VD+Y+ G+IL +L+
Sbjct: 161 VKIGDFGLVTSLKNDGKRX---RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 47/193 (24%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQG---------------------IAQ 462
+LG G G V+ G + T+V VK ++ G+++ Q +
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 463 FESEITVLT----KGTL---------GR----HLFNWEEEGLEPLEWNTRLNI------A 499
E I ++T KG+L G+ L ++ + E + + R N A
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRA 137
Query: 500 LDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSF 557
+V + + ++ADFGL R++ E+ +++ + APE I G T K +V+SF
Sbjct: 138 ANVLVSESLMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSF 196
Query: 558 GMILMDLITGRKV 570
G++L +++T K+
Sbjct: 197 GILLYEIVTYGKI 209
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 23/106 (21%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
++VADFGL R + + +S+ K ++A E + T + T K DV+SFG++L +L+
Sbjct: 172 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 231
Query: 566 T--------------------GRKVVDATHS-DPEYIIHLATWFQK 590
T GR+++ + DP Y + L W K
Sbjct: 232 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPK 277
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 23/106 (21%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
++VADFGL R + + +S+ K ++A E + T + T K DV+SFG++L +L+
Sbjct: 190 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 249
Query: 566 T--------------------GRKVVDATHS-DPEYIIHLATWFQK 590
T GR+++ + DP Y + L W K
Sbjct: 250 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPK 295
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYS 556
NI LD + +++ DFG + VP+ + + GT Y+APE + T +D +S
Sbjct: 136 NILLD--KNGHIKITDFGFAKYVPD-----VTYXLCGTPDYIAPEVVSTKPYNKSIDWWS 188
Query: 557 FGMILMDLITG 567
FG+++ +++ G
Sbjct: 189 FGILIYEMLAG 199
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 23/106 (21%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
++VADFGL R + + +S+ K ++A E + T + T K DV+SFG++L +L+
Sbjct: 164 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 223
Query: 566 T--------------------GRKVVDATHS-DPEYIIHLATWFQK 590
T GR+++ + DP Y + L W K
Sbjct: 224 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPK 269
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 23/106 (21%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
++VADFGL R + + +S+ K ++A E + T + T K DV+SFG++L +L+
Sbjct: 191 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 250
Query: 566 T--------------------GRKVVDATHS-DPEYIIHLATWFQK 590
T GR+++ + DP Y + L W K
Sbjct: 251 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPK 296
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 23/106 (21%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
++VADFGL R + + +S+ K ++A E + T + T K DV+SFG++L +L+
Sbjct: 170 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 229
Query: 566 T--------------------GRKVVDATHS-DPEYIIHLATWFQK 590
T GR+++ + DP Y + L W K
Sbjct: 230 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPK 275
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 23/106 (21%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
++VADFGL R + + +S+ K ++A E + T + T K DV+SFG++L +L+
Sbjct: 169 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 228
Query: 566 T--------------------GRKVVDATHS-DPEYIIHLATWFQK 590
T GR+++ + DP Y + L W K
Sbjct: 229 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPK 274
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 23/106 (21%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
++VADFGL R + + +S+ K ++A E + T + T K DV+SFG++L +L+
Sbjct: 171 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 230
Query: 566 T--------------------GRKVVDATHS-DPEYIIHLATWFQK 590
T GR+++ + DP Y + L W K
Sbjct: 231 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPK 276
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 23/106 (21%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
++VADFGL R + + +S+ K ++A E + T + T K DV+SFG++L +L+
Sbjct: 172 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 231
Query: 566 T--------------------GRKVVDATHS-DPEYIIHLATWFQK 590
T GR+++ + DP Y + L W K
Sbjct: 232 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPK 277
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 23/106 (21%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
++VADFGL R + + +S+ K ++A E + T + T K DV+SFG++L +L+
Sbjct: 167 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 226
Query: 566 T--------------------GRKVVDATHS-DPEYIIHLATWFQK 590
T GR+++ + DP Y + L W K
Sbjct: 227 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPK 272
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 14/132 (10%)
Query: 437 GELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLGRHLFNWEEEGLEPLEWNTRL 496
GEL G E+ + ++ +E A+ I + G H N L+P
Sbjct: 100 GELYTGGELFDEIIKRKRFSEHDAARI---IKQVFSGITYMHKHNIVHRDLKPE------ 150
Query: 497 NIALDVARGD-DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVY 555
NI L+ D D+++ DFGL +N K + GT Y+APE ++ G K DV+
Sbjct: 151 NILLESKEKDCDIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPE-VLRGTYDEKCDVW 206
Query: 556 SFGMILMDLITG 567
S G+IL L++G
Sbjct: 207 SAGVILYILLSG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 14/132 (10%)
Query: 437 GELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLGRHLFNWEEEGLEPLEWNTRL 496
GEL G E+ + ++ +E A+ I + G H N L+P
Sbjct: 100 GELYTGGELFDEIIKRKRFSEHDAARI---IKQVFSGITYMHKHNIVHRDLKPE------ 150
Query: 497 NIALDVARGD-DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVY 555
NI L+ D D+++ DFGL +N K + GT Y+APE ++ G K DV+
Sbjct: 151 NILLESKEKDCDIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPE-VLRGTYDEKCDVW 206
Query: 556 SFGMILMDLITG 567
S G+IL L++G
Sbjct: 207 SAGVILYILLSG 218
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 500 LDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGM 559
L VA G +++ DFG + + +T G+ ++APE + K DV+S+G+
Sbjct: 137 LLVAGGTVLKICDFGTACDI-----QTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGI 191
Query: 560 ILMDLITGRKVVD 572
IL ++IT RK D
Sbjct: 192 ILWEVITRRKPFD 204
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 500 LDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGM 559
L VA G +++ DFG + + +T G+ ++APE + K DV+S+G+
Sbjct: 138 LLVAGGTVLKICDFGTACDI-----QTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGI 192
Query: 560 ILMDLITGRKVVD 572
IL ++IT RK D
Sbjct: 193 ILWEVITRRKPFD 205
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 9/122 (7%)
Query: 458 QGIAQFESEITVLTKGTLGRHLFNWEEEGLEPLEWNTRL-NIALDVARGDDMRVADFGLV 516
Q + +F+ V + LF + +G+ + + +L N+ LD +++ADFG+
Sbjct: 434 QQVGRFKEPHAVFYAAEIAIGLFFLQSKGI--IYRDLKLDNVMLDSE--GHIKIADFGMC 489
Query: 517 RLVPENGKHSILTK-VAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATH 575
+ EN + TK GT Y+APE I VD ++FG++L +++ G+ +
Sbjct: 490 K---ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 546
Query: 576 SD 577
D
Sbjct: 547 ED 548
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 23/106 (21%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
++VADFGL R + + S+ K ++A E + T + T K DV+SFG++L +L+
Sbjct: 171 VKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 230
Query: 566 T--------------------GRKVVDATHS-DPEYIIHLATWFQK 590
T GR+++ + DP Y + L W K
Sbjct: 231 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPK 276
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 57/113 (50%), Gaps = 13/113 (11%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGT--FGYLAPEYIVTGRITAKVDVYSFGM 559
V + +++ DFGL +++P++ ++ + + + F Y APE + + + DV+SFG+
Sbjct: 148 VENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY-APESLTESKFSVASDVWSFGV 206
Query: 560 ILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEEN 612
+L +L T ++ + S P F +M N QM + I+L + N
Sbjct: 207 VLYELFT---YIEKSKSPP-------AEFMRMIGNDKQGQMIVFHLIELLKNN 249
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 37/59 (62%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
++VADFG+ L+P + K + ++ ++A E I G+ T + DV+S+G+ + +L+T
Sbjct: 172 VQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 14/132 (10%)
Query: 437 GELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLGRHLFNWEEEGLEPLEWNTRL 496
GEL G E+ + ++ +E A+ I + G H N L+P
Sbjct: 100 GELYTGGELFDEIIKRKRFSEHDAARI---IKQVFSGITYMHKHNIVHRDLKPE------ 150
Query: 497 NIALDVARGD-DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVY 555
NI L+ D D+++ DFGL +N K + GT Y+APE ++ G K DV+
Sbjct: 151 NILLESKEKDCDIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPE-VLRGTYDEKCDVW 206
Query: 556 SFGMILMDLITG 567
S G+IL L++G
Sbjct: 207 SAGVILYILLSG 218
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++ D G + E + + T+ GT YLAPE + + T VD +SFG + + ITG
Sbjct: 165 KIIDLGYAK---ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++ D G + E + + T+ GT YLAPE + + T VD +SFG + + ITG
Sbjct: 164 KIIDLGYAK---ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
++VADFG+ L+P + K + ++ ++A E I G+ T + DV+S+G+ + +L+T
Sbjct: 153 QVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 60/197 (30%)
Query: 425 RLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------ 472
R+G G GTVYKG K +V VK +++ T + F +E+ VL K
Sbjct: 43 RIGSGSFGTVYKG--KWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 473 ---------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDD---------- 507
+L +HL E + + ++IA A+G D
Sbjct: 101 MTKDNLAIVTQWCEGSSLYKHLHVQETK----FQMFQLIDIARQTAQGMDYLHAKNIIHR 156
Query: 508 --------------MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIV---TGRITA 550
+++ DFGL + + + G+ ++APE I +
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF 216
Query: 551 KVDVYSFGMILMDLITG 567
+ DVYS+G++L +L+TG
Sbjct: 217 QSDVYSYGIVLYELMTG 233
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Query: 458 QGIAQFESEITVLTKGTLGRHLFNWEEEGLEPLEWNTRL-NIALDVARGDDMRVADFGLV 516
Q + +F+ V + LF + +G+ + + +L N+ LD + G +++ADFG+
Sbjct: 113 QQVGRFKEPHAVFYAAEIAIGLFFLQSKGI--IYRDLKLDNVMLD-SEGH-IKIADFGMC 168
Query: 517 RLVPENGKHSILTK-VAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATH 575
+ EN + TK GT Y+APE I VD ++FG++L +++ G+ +
Sbjct: 169 K---ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 225
Query: 576 SD 577
D
Sbjct: 226 ED 227
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 485 EGLEPLEWNTRLNIALD-----VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLA 539
+G+E LE+ + ++ L V G +++ DFGL R + + + + ++A
Sbjct: 183 KGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMA 242
Query: 540 PEYIVTGRITAKVDVYSFGMILMDLIT 566
PE + G T K DV+S+G++L ++ +
Sbjct: 243 PESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTK-VAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ADFGL ++V +H +L K V GT GY APE + +VD++S G+I L+
Sbjct: 190 LKIADFGLSKIV----EHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLC 245
Query: 567 G 567
G
Sbjct: 246 G 246
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 13/113 (11%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGT--FGYLAPEYIVTGRITAKVDVYSFGM 559
V + +++ DFGL +++P++ K K G + APE + + + DV+SFG+
Sbjct: 154 VENENRVKIGDFGLTKVLPQD-KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGV 212
Query: 560 ILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEEN 612
+L +L T ++ + S P F +M N QM + I+L + N
Sbjct: 213 VLYELFT---YIEKSKSPP-------AEFMRMIGNDKQGQMIVFHLIELLKNN 255
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAG---TFGYLAPEYIVTGRITAKVDVYSFG 558
V + +++ DFGL +++P++ K K G F Y APE + + + DV+SFG
Sbjct: 165 VENENRVKIGDFGLTKVLPQD-KEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFG 222
Query: 559 MILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEEN 612
++L +L T ++ + S P F +M N QM + I+L + N
Sbjct: 223 VVLYELFT---YIEKSKSPP-------AEFMRMIGNDKQGQMIVFHLIELLKNN 266
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 510 VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++DFGL ++ GK +++ GT GY+APE + + VD +S G+I L+ G
Sbjct: 164 ISDFGLSKM---EGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 13/113 (11%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGT--FGYLAPEYIVTGRITAKVDVYSFGM 559
V + +++ DFGL +++P++ K K G + APE + + + DV+SFG+
Sbjct: 147 VENENRVKIGDFGLTKVLPQD-KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGV 205
Query: 560 ILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEEN 612
+L +L T ++ + S P F +M N QM + I+L + N
Sbjct: 206 VLYELFT---YIEKSKSPP-------AEFMRMIGNDKQGQMIVFHLIELLKNN 248
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 13/113 (11%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGT--FGYLAPEYIVTGRITAKVDVYSFGM 559
V + +++ DFGL +++P++ K K G + APE + + + DV+SFG+
Sbjct: 150 VENENRVKIGDFGLTKVLPQD-KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGV 208
Query: 560 ILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEEN 612
+L +L T ++ + S P F +M N QM + I+L + N
Sbjct: 209 VLYELFT---YIEKSKSPP-------AEFMRMIGNDKQGQMIVFHLIELLKNN 251
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
++VADFGL R + + +S+ + A E + T R T K DV+SFG++L +L+
Sbjct: 163 VKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELL 222
Query: 566 TGRKVVDATHSDPEYIIHL 584
T R H DP + H
Sbjct: 223 T-RGAPPYRHIDPFDLTHF 240
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAG---TFGYLAPEYIVTGRITAKVDVYSFG 558
V + +++ DFGL +++P++ K K G F Y APE + + + DV+SFG
Sbjct: 150 VENENRVKIGDFGLTKVLPQD-KEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFG 207
Query: 559 MILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEEN 612
++L +L T ++ + S P F +M N QM + I+L + N
Sbjct: 208 VVLYELFT---YIEKSKSPP-------AEFMRMIGNDKQGQMIVFHLIELLKNN 251
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAG---TFGYLAPEYIVTGRITAKVDVYSFG 558
V + +++ DFGL +++P++ K K G F Y APE + + + DV+SFG
Sbjct: 147 VENENRVKIGDFGLTKVLPQD-KEFFKVKEPGESPIFWY-APESLTESKFSVASDVWSFG 204
Query: 559 MILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEEN 612
++L +L T ++ + S P F +M N QM + I+L + N
Sbjct: 205 VVLYELFT---YIEKSKSPP-------AEFMRMIGNDKQGQMIVFHLIELLKNN 248
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 13/113 (11%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGT--FGYLAPEYIVTGRITAKVDVYSFGM 559
V + +++ DFGL +++P++ K K G + APE + + + DV+SFG+
Sbjct: 152 VENENRVKIGDFGLTKVLPQD-KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGV 210
Query: 560 ILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEEN 612
+L +L T ++ + S P F +M N QM + I+L + N
Sbjct: 211 VLYELFT---YIEKSKSPP-------AEFMRMIGNDKQGQMIVFHLIELLKNN 253
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAG---TFGYLAPEYIVTGRITAKVDVYSFG 558
V + +++ DFGL +++P++ K K G F Y APE + + + DV+SFG
Sbjct: 165 VENENRVKIGDFGLTKVLPQD-KEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFG 222
Query: 559 MILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEEN 612
++L +L T ++ + S P F +M N QM + I+L + N
Sbjct: 223 VVLYELFT---YIEKSKSPP-------AEFMRMIGNDKQGQMIVFHLIELLKNN 266
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAG---TFGYLAPEYIVTGRITAKVDVYSFG 558
V + +++ DFGL +++P++ K K G F Y APE + + + DV+SFG
Sbjct: 178 VENENRVKIGDFGLTKVLPQD-KEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFG 235
Query: 559 MILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEEN 612
++L +L T ++ + S P F +M N QM + I+L + N
Sbjct: 236 VVLYELFT---YIEKSKSPP-------AEFMRMIGNDKQGQMIVFHLIELLKNN 279
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAG---TFGYLAPEYIVTGRITAKVDVYSFG 558
V + +++ DFGL +++P++ K K G F Y APE + + + DV+SFG
Sbjct: 147 VENENRVKIGDFGLTKVLPQD-KEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFG 204
Query: 559 MILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEEN 612
++L +L T ++ + S P F +M N QM + I+L + N
Sbjct: 205 VVLYELFT---YIEKSKSPP-------AEFMRMIGNDKQGQMIVFHLIELLKNN 248
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAG---TFGYLAPEYIVTGRITAKVDVYSFG 558
V + +++ DFGL +++P++ K K G F Y APE + + + DV+SFG
Sbjct: 145 VENENRVKIGDFGLTKVLPQD-KEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFG 202
Query: 559 MILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEEN 612
++L +L T ++ + S P F +M N QM + I+L + N
Sbjct: 203 VVLYELFT---YIEKSKSPP-------AEFMRMIGNDKQGQMIVFHLIELLKNN 246
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAG---TFGYLAPEYIVTGRITAKVDVYSFG 558
V + +++ DFGL +++P++ K K G F Y APE + + + DV+SFG
Sbjct: 151 VENENRVKIGDFGLTKVLPQD-KEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFG 208
Query: 559 MILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEEN 612
++L +L T ++ + S P F +M N QM + I+L + N
Sbjct: 209 VVLYELFT---YIEKSKSPP-------AEFMRMIGNDKQGQMIVFHLIELLKNN 252
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAG---TFGYLAPEYIVTGRITAKVDVYSFG 558
V + +++ DFGL +++P++ K K G F Y APE + + + DV+SFG
Sbjct: 146 VENENRVKIGDFGLTKVLPQD-KEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFG 203
Query: 559 MILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEEN 612
++L +L T ++ + S P F +M N QM + I+L + N
Sbjct: 204 VVLYELFT---YIEKSKSPP-------AEFMRMIGNDKQGQMIVFHLIELLKNN 247
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAG---TFGYLAPEYIVTGRITAKVDVYSFG 558
V + +++ DFGL +++P++ K K G F Y APE + + + DV+SFG
Sbjct: 150 VENENRVKIGDFGLTKVLPQD-KEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFG 207
Query: 559 MILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEEN 612
++L +L T ++ + S P F +M N QM + I+L + N
Sbjct: 208 VVLYELFT---YIEKSKSPP-------AEFMRMIGNDKQGQMIVFHLIELLKNN 251
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAG---TFGYLAPEYIVTGRITAKVDVYSFG 558
V + +++ DFGL +++P++ K K G F Y APE + + + DV+SFG
Sbjct: 153 VENENRVKIGDFGLTKVLPQD-KEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFG 210
Query: 559 MILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEEN 612
++L +L T ++ + S P F +M N QM + I+L + N
Sbjct: 211 VVLYELFT---YIEKSKSPP-------AEFMRMIGNDKQGQMIVFHLIELLKNN 254
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 23/106 (21%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
++VADFGL R + + S+ K ++A E + T + T K DV+SFG++L +L+
Sbjct: 231 VKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 290
Query: 566 T--------------------GRKVVDATHS-DPEYIIHLATWFQK 590
T GR+++ + DP Y + L W K
Sbjct: 291 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPK 336
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 23/106 (21%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
++VADFGL R + + S+ K ++A E + T + T K DV+SFG++L +L+
Sbjct: 173 VKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 232
Query: 566 T--------------------GRKVVDATHS-DPEYIIHLATWFQK 590
T GR+++ + DP Y + L W K
Sbjct: 233 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPK 278
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 23/106 (21%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
++VADFGL R + + S+ K ++A E + T + T K DV+SFG++L +L+
Sbjct: 173 VKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 232
Query: 566 T--------------------GRKVVDATHS-DPEYIIHLATWFQK 590
T GR+++ + DP Y + L W K
Sbjct: 233 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPK 278
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 23/106 (21%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
++VADFGL R + + S+ K ++A E + T + T K DV+SFG++L +L+
Sbjct: 170 VKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 229
Query: 566 T--------------------GRKVVDATHS-DPEYIIHLATWFQK 590
T GR+++ + DP Y + L W K
Sbjct: 230 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPK 275
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 23/106 (21%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
++VADFGL R + + S+ K ++A E + T + T K DV+SFG++L +L+
Sbjct: 177 VKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 236
Query: 566 T--------------------GRKVVDATHS-DPEYIIHLATWFQK 590
T GR+++ + DP Y + L W K
Sbjct: 237 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPK 282
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V ++V+DFG+ R V ++ +++ T + +PE R ++K DV+SFG+++
Sbjct: 139 VGENQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 197
Query: 562 MDLITGRKVVDATHSDPEYIIHLATWFQ 589
++ + K+ S+ E + ++T F+
Sbjct: 198 WEVFSEGKIPYENRSNSEVVEDISTGFR 225
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 23/106 (21%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
++VADFGL R + + S+ K ++A E + T + T K DV+SFG++L +L+
Sbjct: 172 VKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 231
Query: 566 T--------------------GRKVVDATHS-DPEYIIHLATWFQK 590
T GR+++ + DP Y + L W K
Sbjct: 232 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPK 277
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 23/106 (21%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
++VADFGL R + + S+ K ++A E + T + T K DV+SFG++L +L+
Sbjct: 172 VKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 231
Query: 566 T--------------------GRKVVDATHS-DPEYIIHLATWFQK 590
T GR+++ + DP Y + L W K
Sbjct: 232 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPK 277
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 501 DVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMI 560
D + +++ DFGL L ++ +HS T AGT Y+APE + +T K D++S G++
Sbjct: 159 DTSPHSPIKIIDFGLAELF-KSDEHS--TNAAGTALYMAPE-VFKRDVTFKCDIWSAGVV 214
Query: 561 LMDLITG 567
+ L+TG
Sbjct: 215 MYFLLTG 221
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V ++V+DFG+ R V ++ +++ T + +PE R ++K DV+SFG+++
Sbjct: 137 VGENQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 195
Query: 562 MDLITGRKVVDATHSDPEYIIHLATWFQ 589
++ + K+ S+ E + ++T F+
Sbjct: 196 WEVFSEGKIPYENRSNSEVVEDISTGFR 223
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V ++V+DFG+ R V ++ +++ T + +PE R ++K DV+SFG+++
Sbjct: 136 VGENQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 194
Query: 562 MDLITGRKVVDATHSDPEYIIHLATWFQ 589
++ + K+ S+ E + ++T F+
Sbjct: 195 WEVFSEGKIPYENRSNSEVVEDISTGFR 222
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V ++V+DFG+ R V ++ +++ T + +PE R ++K DV+SFG+++
Sbjct: 156 VGENQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 214
Query: 562 MDLITGRKVVDATHSDPEYIIHLATWFQ 589
++ + K+ S+ E + ++T F+
Sbjct: 215 WEVFSEGKIPYENRSNSEVVEDISTGFR 242
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V ++V+DFG+ R V ++ +++ T + +PE R ++K DV+SFG+++
Sbjct: 134 VGENQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 192
Query: 562 MDLITGRKVVDATHSDPEYIIHLATWFQ 589
++ + K+ S+ E + ++T F+
Sbjct: 193 WEVFSEGKIPYENRSNSEVVEDISTGFR 220
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V ++V+DFG+ R V ++ +++ T + +PE R ++K DV+SFG+++
Sbjct: 136 VGENQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 194
Query: 562 MDLITGRKVVDATHSDPEYIIHLATWFQ 589
++ + K+ S+ E + ++T F+
Sbjct: 195 WEVFSEGKIPYENRSNSEVVEDISTGFR 222
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + T++ GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 146 ELKIADFGWSVHAPSSRR----TELCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 200
Query: 566 TGRKVVDATHSDPEY 580
G+ +A Y
Sbjct: 201 VGKPPFEANTYQETY 215
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + T + GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 172 ELKIADFGWSVHAPSSRR----TTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 226
Query: 566 TGRKVVDA 573
G+ +A
Sbjct: 227 VGKPPFEA 234
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 476 GRHLFNWEEEGLEPLEWNTRLNIALDVAR---GDDM--RVADFGLVRLVPENGKHSILTK 530
R+ +G++ L N ++ L + DDM ++ DFGL + +G+
Sbjct: 144 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK--KX 201
Query: 531 VAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYI 581
+ GT Y+APE + + +VD++S G IL L+ G+ + + YI
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYI 252
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
D+++ DFGL + +G+ + GT Y+APE + + +VD++S G IL L+
Sbjct: 164 DVKIGDFGLATKIEFDGERK--KDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLV 221
Query: 567 GRKVVDATHSDPEYI 581
G+ + + YI
Sbjct: 222 GKPPFETSCLKETYI 236
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 44/127 (34%)
Query: 492 WNTRLNIALDVARG------------------------DDMRVADFGLVRLV------PE 521
W+ R++ A D+A G ++ VADFGL RL+ PE
Sbjct: 107 WSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166
Query: 522 NGKHSILT-------KVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDAT 574
G S+ V G ++APE I KVDV+SFG++L ++I GR
Sbjct: 167 -GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GR-----V 219
Query: 575 HSDPEYI 581
++DP+Y+
Sbjct: 220 NADPDYL 226
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 476 GRHLFNWEEEGLEPLEWNTRLNIALDVAR---GDDM--RVADFGLVRLVPENGKHSILTK 530
R+ +G++ L N ++ L + DDM ++ DFGL + +G+
Sbjct: 144 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK--KD 201
Query: 531 VAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYI 581
+ GT Y+APE + + +VD++S G IL L+ G+ + + YI
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYI 252
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 476 GRHLFNWEEEGLEPLEWNTRLNIALDVAR---GDDM--RVADFGLVRLVPENGKHSILTK 530
R+ +G++ L N ++ L + DDM ++ DFGL + +G+
Sbjct: 144 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK--KT 201
Query: 531 VAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYI 581
+ GT Y+APE + + +VD++S G IL L+ G+ + + YI
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYI 252
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 504 RGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMD 563
+G +++ADFGL + G+ AGT GYL+PE + VD+++ G+IL
Sbjct: 168 KGAAVKLADFGLA--IEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYI 225
Query: 564 LITG 567
L+ G
Sbjct: 226 LLVG 229
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + T + GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 163 ELKIADFGWSVHAPSSRR----TTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 217
Query: 566 TGRKVVDA 573
G+ +A
Sbjct: 218 VGKPPFEA 225
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT--FGYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
+++ADFGL +L+P + + ++ + + F Y APE + + + DV+SFG++L +L
Sbjct: 153 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLYELF 211
Query: 566 T 566
T
Sbjct: 212 T 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT--FGYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
+++ADFGL +L+P + + ++ + + F Y APE + + + DV+SFG++L +L
Sbjct: 154 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLYELF 212
Query: 566 T 566
T
Sbjct: 213 T 213
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 503 ARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILM 562
A+G +++ADFGL V ++ AGT GYL+PE + + VD+++ G+IL
Sbjct: 142 AKGAAVKLADFGLAIEVNDS---EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILY 198
Query: 563 DLITG 567
L+ G
Sbjct: 199 ILLVG 203
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 503 ARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILM 562
A+G +++ADFGL V ++ AGT GYL+PE + + VD+++ G+IL
Sbjct: 165 AKGAAVKLADFGLAIEVNDS---EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILY 221
Query: 563 DLITG 567
L+ G
Sbjct: 222 ILLVG 226
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
VA G M+++DFGL R V E + ++ ++A E + T + DV+SFG++L
Sbjct: 183 VAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
Query: 562 MDLIT 566
+++T
Sbjct: 243 WEIVT 247
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 503 ARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILM 562
A+G +++ADFGL V ++ AGT GYL+PE + + VD+++ G+IL
Sbjct: 141 AKGAAVKLADFGLAIEVNDS---EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILY 197
Query: 563 DLITG 567
L+ G
Sbjct: 198 ILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 503 ARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILM 562
A+G +++ADFGL V ++ AGT GYL+PE + + VD+++ G+IL
Sbjct: 142 AKGAAVKLADFGLAIEVNDS---EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILY 198
Query: 563 DLITG 567
L+ G
Sbjct: 199 ILLVG 203
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 504 RGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMD 563
+G +++ADFGL + G AGT GYL+PE + VD+++ G+IL
Sbjct: 141 KGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYI 198
Query: 564 LITG 567
L+ G
Sbjct: 199 LLVG 202
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 458 QGIAQFESEITVLTKGTLGRHLFNWEEEGLEPLEWNTRL-NIALDVARGDDMRVADFGLV 516
Q + +F+ V + LF + G+ + + +L N+ LD + G +++ADFG+
Sbjct: 112 QQVGKFKEPQAVFYAAEISIGLFFLHKRGI--IYRDLKLDNVMLD-SEGH-IKIADFGMC 167
Query: 517 RLVPENGKHSILTK-VAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATH 575
+ E+ + T+ GT Y+APE I VD +++G++L +++ G+ D
Sbjct: 168 K---EHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED 224
Query: 576 SD 577
D
Sbjct: 225 ED 226
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + T ++GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 147 ELKIADFGWSCHAPSSRR----TTLSGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 201
Query: 566 TGRKVVDATHSDPEY 580
G+ +A Y
Sbjct: 202 VGKPPFEANTYQETY 216
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
++++ADFG P + + T + GT YL PE I KVD++S G++ + +
Sbjct: 151 ELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLV 206
Query: 567 GRKVVDA 573
G+ +A
Sbjct: 207 GKPPFEA 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT--FGYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
+++ADFGL +L+P + + ++ + + F Y APE + + + DV+SFG++L +L
Sbjct: 166 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLYELF 224
Query: 566 T 566
T
Sbjct: 225 T 225
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + T + GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 151 ELKIADFGWSVHAPSSRR----TTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 205
Query: 566 TGRKVVDATHSDPEY 580
G+ +A Y
Sbjct: 206 VGKPPFEANTYQETY 220
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + T + GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 146 ELKIADFGWSVHAPSSRR----TTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 200
Query: 566 TGRKVVDATHSDPEY 580
G+ +A Y
Sbjct: 201 VGKPPFEANTYQETY 215
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + T + GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 149 ELKIADFGWSVHAPSSRR----TTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 203
Query: 566 TGRKVVDATHSDPEY 580
G+ +A Y
Sbjct: 204 VGKPPFEANTYQETY 218
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + T + GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 151 ELKIADFGWSVHAPSSRR----TTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 205
Query: 566 TGRKVVDATHSDPEY 580
G+ +A Y
Sbjct: 206 VGKPPFEANTYQETY 220
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 21/100 (21%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITA--KVDV 554
N+ LD + ++ADFGL ++ + L G+ Y APE +++GR+ A +VD+
Sbjct: 146 NVLLDAHM--NAKIADFGLSNMMSDG---EFLRXSCGSPNYAAPE-VISGRLYAGPEVDI 199
Query: 555 YSFGMILMDLITG-------------RKVVDATHSDPEYI 581
+S G+IL L+ G +K+ D P+Y+
Sbjct: 200 WSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYL 239
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + T + GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 147 ELKIADFGWSVHAPSSRR----TDLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 201
Query: 566 TGRKVVDATHSDPEY 580
G+ +A Y
Sbjct: 202 VGKPPFEANTYQETY 216
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILT-KVAGTFGYLAPEYIVTGRITAKVDVY 555
NI LD + +++ADFG+ + EN T + GT Y+APE ++ + VD +
Sbjct: 149 NILLD--KDGHIKIADFGMCK---ENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWW 203
Query: 556 SFGMILMDLITGRKVVDATHSDPEYIIH 583
SFG++L +++ G+ D E + H
Sbjct: 204 SFGVLLYEMLIGQSPFHG--QDEEELFH 229
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + T + GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 151 ELKIADFGWSVHAPSSRR----TDLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 205
Query: 566 TGRKVVDATHSDPEY 580
G+ +A Y
Sbjct: 206 VGKPPFEANTYQETY 220
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + T + GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 146 ELKIADFGWSVHAPSSRR----TDLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 200
Query: 566 TGRKVVDATHSDPEY 580
G+ +A Y
Sbjct: 201 VGKPPFEANTYQETY 215
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
D+++ DFG+ R + G L ++ GT YLAPE + IT D+++ G+I L+T
Sbjct: 172 DIKIVDFGMSRKI---GHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + T + GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 146 ELKIADFGWSVHAPSSRR----TDLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 200
Query: 566 TGRKVVDATHSDPEY 580
G+ +A Y
Sbjct: 201 VGKPPFEANTYQETY 215
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 504 RGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMD 563
+G +++ADFGL + G+ AGT GYL+PE + VD+++ G+IL
Sbjct: 159 KGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYI 216
Query: 564 LITG 567
L+ G
Sbjct: 217 LLVG 220
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 504 RGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMD 563
+G +++ADFGL + G+ AGT GYL+PE + VD+++ G+IL
Sbjct: 148 KGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYI 205
Query: 564 LITG 567
L+ G
Sbjct: 206 LLVG 209
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 10/70 (14%)
Query: 506 DDMRVADFGLVRLVPENGK-HSILTKV---------AGTFGYLAPEYIVTGRITAKVDVY 555
D ++V DFGLV + ++ + ++LT + GT Y++PE I + KVD++
Sbjct: 201 DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIF 260
Query: 556 SFGMILMDLI 565
S G+IL +L+
Sbjct: 261 SLGLILFELL 270
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + T + GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 146 ELKIADFGWSVHAPSSRR----TXLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 200
Query: 566 TGRKVVDATHSDPEY 580
G+ +A Y
Sbjct: 201 VGKPPFEANTYQETY 215
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 503 ARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILM 562
++G +++ADFGL + G AGT GYL+PE + VD+++ G+IL
Sbjct: 140 SKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILY 197
Query: 563 DLITG 567
L+ G
Sbjct: 198 ILLVG 202
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 508 MRVADFGL-VRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFG ++ PE K S ++ GT ++APE + KVD++S G++ +++I
Sbjct: 155 VKLTDFGFCAQITPEQSKRS---EMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE 211
Query: 567 G 567
G
Sbjct: 212 G 212
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 503 ARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILM 562
++G +++ADFGL + G AGT GYL+PE + VD+++ G+IL
Sbjct: 140 SKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILY 197
Query: 563 DLITG 567
L+ G
Sbjct: 198 ILLVG 202
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + T + GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 145 ELKIADFGWSVHAPSSRR----TTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 199
Query: 566 TGRKVVDATHSDPEY 580
G+ +A Y
Sbjct: 200 VGKPPFEANTYQETY 214
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + T + GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 150 ELKIADFGWSVHAPSSRR----TTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 204
Query: 566 TGRKVVDATHSDPEY 580
G+ +A Y
Sbjct: 205 VGKPPFEANTYQETY 219
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + T + GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 143 ELKIADFGWSVHAPSSRR----TTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 197
Query: 566 TGRKVVDATHSDPEY 580
G+ +A Y
Sbjct: 198 VGKPPFEANTYQETY 212
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 508 MRVADFGL-VRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFG ++ PE K S + GT ++APE + KVD++S G++ +++I
Sbjct: 155 VKLTDFGFCAQITPEQSKRSTMV---GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE 211
Query: 567 G 567
G
Sbjct: 212 G 212
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + T + GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 149 ELKIADFGWSVHAPSSRR----TTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 203
Query: 566 TGRKVVDATHSDPEY 580
G+ +A Y
Sbjct: 204 VGKPPFEANTYQETY 218
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 87/212 (41%), Gaps = 56/212 (26%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQ---------------------GIAQ 462
LG G G V G+ K +V VK ++ GS++E G+
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 463 FESEITVLTKGTLGRHLFNW---EEEGLEPLEWNTRLNIALDVARGDD------------ 507
E I ++T+ L N+ +GLEP + L + DV G
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLRSHGKGLEP---SQLLEMCYDVCEGMAFLESHQFIHRDL 130
Query: 508 ------------MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVD 553
++V+DFG+ R V ++ ++ V F + APE + ++K D
Sbjct: 131 AARNCLVDRDLCVKVSDFGMTRYVLDD---QYVSSVGTKFPVKWSAPEVFHYFKYSSKSD 187
Query: 554 VYSFGMILMDLITGRKVVDATHSDPEYIIHLA 585
V++FG+++ ++ + K+ +++ E ++ ++
Sbjct: 188 VWAFGILMWEVFSLGKMPYDLYTNSEVVLKVS 219
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 508 MRVADFGL-VRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFG ++ PE K S + GT ++APE + KVD++S G++ +++I
Sbjct: 155 VKLTDFGFCAQITPEQSKRSXMV---GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE 211
Query: 567 G 567
G
Sbjct: 212 G 212
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTK-VAGTFGYLAPEYIVTGRITAKVDVY 555
NI LD + +++ADFG+ + EN T GT Y+APE ++ + VD +
Sbjct: 148 NILLD--KDGHIKIADFGMCK---ENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWW 202
Query: 556 SFGMILMDLITGRKVVDATHSDPEYIIH 583
SFG++L +++ G+ D E + H
Sbjct: 203 SFGVLLYEMLIGQSPFHG--QDEEELFH 228
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 508 MRVADFGL-VRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFG ++ PE K S + GT ++APE + KVD++S G++ +++I
Sbjct: 156 VKLTDFGFCAQITPEQSKRSXMV---GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE 212
Query: 567 G 567
G
Sbjct: 213 G 213
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 508 MRVADFGL-VRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFG ++ PE K S + GT ++APE + KVD++S G++ +++I
Sbjct: 156 VKLTDFGFCAQITPEQSKRSTMV---GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE 212
Query: 567 G 567
G
Sbjct: 213 G 213
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT--FGYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
+++ADFGL +L+P + ++ + + F Y APE + + + DV+SFG++L +L
Sbjct: 150 VKIADFGLAKLLPLDKDXXVVREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLYELF 208
Query: 566 T 566
T
Sbjct: 209 T 209
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 10/70 (14%)
Query: 506 DDMRVADFGLVRLVPENGK-HSILTKV---------AGTFGYLAPEYIVTGRITAKVDVY 555
D ++V DFGLV + ++ + ++LT + GT Y++PE I + KVD++
Sbjct: 155 DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIF 214
Query: 556 SFGMILMDLI 565
S G+IL +L+
Sbjct: 215 SLGLILFELL 224
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGT--FGYLAPEYIVTGRITAKVDV 554
N+ LD R +++ DFGL + VPE ++ + + + F Y APE + + DV
Sbjct: 147 NVLLDNDRL--VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYKFYYASDV 203
Query: 555 YSFGMILMDLITGRKVVDATHSDPEYIIHL 584
+SFG+ L +L+T D++ S P + L
Sbjct: 204 WSFGVTLYELLTH---CDSSQSPPTKFLEL 230
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
++++ DFGL V +G+ + GT Y+APE + + +VDV+S G I+ L+
Sbjct: 159 EVKIGDFGLATKVEYDGERK--KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 216
Query: 567 GR 568
G+
Sbjct: 217 GK 218
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
++++ DFGL V +G+ + GT Y+APE + + +VDV+S G I+ L+
Sbjct: 155 EVKIGDFGLATKVEYDGERK--KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 212
Query: 567 GR 568
G+
Sbjct: 213 GK 214
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
VA G M+++DFGL R V E ++ ++A E + T + DV+SFG++L
Sbjct: 183 VAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
Query: 562 MDLIT 566
+++T
Sbjct: 243 WEIVT 247
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
++++ DFGL V +G+ + GT Y+APE + + +VDV+S G I+ L+
Sbjct: 155 EVKIGDFGLATKVEYDGERK--KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 212
Query: 567 GR 568
G+
Sbjct: 213 GK 214
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 18/139 (12%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
++++ DFGL V +G+ + + GT Y+APE + + +VDV+S G I+ L+
Sbjct: 179 EVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 236
Query: 567 GR-------------KVVDATHSDPEYIIHL-ATWFQKMHKNHDTFQMAIDKTIQLDEEN 612
G+ ++ +S P++I + A+ QKM + T + I++ L++E
Sbjct: 237 GKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINEL--LNDEF 294
Query: 613 LANVSTVAELGDHCCANEP 631
+ A L C P
Sbjct: 295 FTSGYIPARLPITCLTIPP 313
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
VA G M+++DFGL R V E ++ ++A E + T + DV+SFG++L
Sbjct: 183 VAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
Query: 562 MDLIT 566
+++T
Sbjct: 243 WEIVT 247
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGT--FGYLAPEYIVTGRITAKVDV 554
N+ LD R +++ DFGL + VPE ++ + + + F Y APE + + DV
Sbjct: 147 NVLLDNDRL--VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYKFYYASDV 203
Query: 555 YSFGMILMDLITGRKVVDATHSDPEYIIHL 584
+SFG+ L +L+T D++ S P + L
Sbjct: 204 WSFGVTLYELLTH---CDSSQSPPTKFLEL 230
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 19/125 (15%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + T + GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 150 ELKIADFGWSVHAPSSRR----TTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 204
Query: 566 TGRKVVDATHSDPEYIIHLATWFQKMHKNHDTF-----QMAIDKTIQLDEENLANVSTVA 620
G +A H+ E ++++ + TF + A D +L + N + T+A
Sbjct: 205 VGMPPFEA-HTYQET-------YRRISRVEFTFPDFVTEGARDLISRLLKHNASQRLTLA 256
Query: 621 ELGDH 625
E+ +H
Sbjct: 257 EVLEH 261
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
++++ DFGL V +G+ + + GT Y+APE + + +VDV+S G I+ L+
Sbjct: 177 EVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 234
Query: 567 GR 568
G+
Sbjct: 235 GK 236
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+ + DFGL ++ +NG I++ GT GY+APE + + VD +S G+I L+ G
Sbjct: 148 IMITDFGLSKM-EQNG---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITA--KVDV 554
N+ LD + ++ADFGL ++ + L G+ Y APE +++GR+ A +VD+
Sbjct: 141 NVLLDAHM--NAKIADFGLSNMMSDG---EFLRTSCGSPNYAAPE-VISGRLYAGPEVDI 194
Query: 555 YSFGMILMDLITGRKVVDATH 575
+S G+IL L+ G D H
Sbjct: 195 WSCGVILYALLCGTLPFDDEH 215
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITA--KVDV 554
N+ LD + ++ADFGL ++ + L G+ Y APE +++GR+ A +VD+
Sbjct: 141 NVLLDAHM--NAKIADFGLSNMMSDG---EFLRDSCGSPNYAAPE-VISGRLYAGPEVDI 194
Query: 555 YSFGMILMDLITGRKVVDATH 575
+S G+IL L+ G D H
Sbjct: 195 WSCGVILYALLCGTLPFDDEH 215
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 72/141 (51%), Gaps = 13/141 (9%)
Query: 439 LKDGTEVGVKRMELGSV---TEQGIAQFESEITVLTKGTLGRHLFNWEEEGLEPLEWNTR 495
+KD + +K + GSV + +A+ E + VL + T+ + EGLE L N +
Sbjct: 84 VKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIAT-ILREVLEGLEYLHKNGQ 142
Query: 496 LN---IALDVARGDD--MRVADFGLVRLVPENG---KHSILTKVAGTFGYLAPEYIVTGR 547
++ A ++ G+D +++ADFG+ + G ++ + GT ++APE + R
Sbjct: 143 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVR 202
Query: 548 -ITAKVDVYSFGMILMDLITG 567
K D++SFG+ ++L TG
Sbjct: 203 GYDFKADIWSFGITAIELATG 223
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + + GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 172 ELKIADFGWSVHAPSSRRDDL----CGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 226
Query: 566 TGRKVVDA 573
G+ +A
Sbjct: 227 VGKPPFEA 234
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
++++ DFGL V +G+ + + GT Y+APE + + +VDV+S G I+ L+
Sbjct: 153 EVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 210
Query: 567 GR 568
G+
Sbjct: 211 GK 212
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAG---TFGYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
+V+DFGL R + EN T G + APE I + T+ D +S+G+++ +++
Sbjct: 156 KVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 215
Query: 566 T 566
+
Sbjct: 216 S 216
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + ++ GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 147 ELKIADFGWSVHAPSSRRDTL----CGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 201
Query: 566 TGRKVVDATHSDPEY 580
G+ +A Y
Sbjct: 202 VGKPPFEANTYQETY 216
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V + MR+ADFGL R + + T ++APE + T + DV+SFG+++
Sbjct: 190 VTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 562 MDLIT 566
++ T
Sbjct: 250 WEIFT 254
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R ++T+ Y APE I+ R T VD++S G I+ ++I
Sbjct: 166 ELKILDFGLARQADSEMXGXVVTR-----WYRAPEVILNWMRYTQTVDIWSVGCIMAEMI 220
Query: 566 TGR 568
TG+
Sbjct: 221 TGK 223
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 72/141 (51%), Gaps = 13/141 (9%)
Query: 439 LKDGTEVGVKRMELGSV---TEQGIAQFESEITVLTKGTLGRHLFNWEEEGLEPLEWNTR 495
+KD + +K + GSV + +A+ E + VL + T+ + EGLE L N +
Sbjct: 79 VKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIAT-ILREVLEGLEYLHKNGQ 137
Query: 496 LN---IALDVARGDD--MRVADFGLVRLVPENG---KHSILTKVAGTFGYLAPEYIVTGR 547
++ A ++ G+D +++ADFG+ + G ++ + GT ++APE + R
Sbjct: 138 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVR 197
Query: 548 -ITAKVDVYSFGMILMDLITG 567
K D++SFG+ ++L TG
Sbjct: 198 GYDFKADIWSFGITAIELATG 218
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+ ++DFGL ++ S+L+ GT GY+APE + + VD +S G+I L+ G
Sbjct: 158 IMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + ++ GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 149 ELKIADFGWSVHAPSSRRAAL----CGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 203
Query: 566 TGRKVVDATHSDPEY 580
G+ +A Y
Sbjct: 204 VGKPPFEANTYQETY 218
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V + M++ADFGL R + + T ++APE + T + DV+SFG++L
Sbjct: 168 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 227
Query: 562 MDLIT 566
++ T
Sbjct: 228 WEIFT 232
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + ++ GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 146 ELKIADFGWSVHAPSSRRAAL----CGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 200
Query: 566 TGRKVVDA-THSD 577
G+ +A T+ D
Sbjct: 201 VGKPPFEANTYQD 213
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+ ++DFGL ++ S+L+ GT GY+APE + + VD +S G+I L+ G
Sbjct: 158 IMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
M++ADFGL R + + T ++APE + T + DV+SFG++L ++ T
Sbjct: 178 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 36/65 (55%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V +G +++ DFG+ R + + + + ++ PE I+ + T + DV+SFG++L
Sbjct: 191 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVL 250
Query: 562 MDLIT 566
++ T
Sbjct: 251 WEIFT 255
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+ ++DFGL ++ S+L+ GT GY+APE + + VD +S G+I L+ G
Sbjct: 158 IMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 15/83 (18%)
Query: 496 LNIALDVARGDDMRVADFGLVRLVPEN------------GKHSILTKVAGTFGYLAPEYI 543
+NI +D +R ++++ DFGL + V + G LT GT Y+A E +
Sbjct: 145 MNIFIDESR--NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVL 202
Query: 544 V-TGRITAKVDVYSFGMILMDLI 565
TG K+D+YS G+I ++I
Sbjct: 203 DGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V G +++ADFGL R+ LT V T Y APE ++ VD++S G I
Sbjct: 153 VTSGGTVKLADFGLARIY---SYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIF 209
Query: 562 MDLI 565
++
Sbjct: 210 AEMF 213
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 36/65 (55%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V +G +++ DFG+ R + + + + ++ PE I+ + T + DV+SFG++L
Sbjct: 168 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVL 227
Query: 562 MDLIT 566
++ T
Sbjct: 228 WEIFT 232
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
M++ADFGL R + + T ++APE + T + DV+SFG++L ++ T
Sbjct: 182 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 510 VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++DFGL ++ S+L+ GT GY+APE + + VD +S G+I L+ G
Sbjct: 160 ISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++A+FG P + + T + GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 148 ELKIANFGWSVHAPSSRR----TTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 202
Query: 566 TGRKVVDATHSDPEY 580
G+ +A Y
Sbjct: 203 VGKPPFEANTYQETY 217
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
M++ADFGL R + + T ++APE + T + DV+SFG++L ++ T
Sbjct: 181 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
M++ADFGL R + + T ++APE + T + DV+SFG++L ++ T
Sbjct: 189 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
M++ADFGL R + + T ++APE + T + DV+SFG++L ++ T
Sbjct: 189 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 36/65 (55%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V +G +++ DFG+ R + + + + ++ PE I+ + T + DV+SFG++L
Sbjct: 162 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVL 221
Query: 562 MDLIT 566
++ T
Sbjct: 222 WEIFT 226
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + + GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 148 ELKIADFGWSVHAPSSRR----XXLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 202
Query: 566 TGRKVVDATHSDPEY 580
G+ +A Y
Sbjct: 203 VGKPPFEANTYQETY 217
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 15/83 (18%)
Query: 496 LNIALDVARGDDMRVADFGLVRLVPEN------------GKHSILTKVAGTFGYLAPEYI 543
+NI +D +R ++++ DFGL + V + G LT GT Y+A E +
Sbjct: 145 MNIFIDESR--NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVL 202
Query: 544 V-TGRITAKVDVYSFGMILMDLI 565
TG K+D+YS G+I ++I
Sbjct: 203 DGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 51/202 (25%)
Query: 414 RNATNNFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMEL-------------------- 452
R + + + RLGRG G V++ E K G + VK++ L
Sbjct: 89 REEVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTSPRIV 148
Query: 453 ---GSVTEQGIAQFESEITVLTKGTLG------------RHLFNWEEEGLEPLEW-NTRL 496
G+V E E+ L G+LG R L+ + + LE LE+ ++R
Sbjct: 149 PLYGAVREGPWVNIFMEL--LEGGSLGQLVKEQGCLPEDRALY-YLGQALEGLEYLHSRR 205
Query: 497 NIALDV--------ARGDDMRVADFG-LVRLVPENGKHSILTK--VAGTFGYLAPEYIVT 545
+ DV + G + DFG V L P+ S+LT + GT ++APE ++
Sbjct: 206 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLG 265
Query: 546 GRITAKVDVYSFGMILMDLITG 567
AKVDV+S +++ ++ G
Sbjct: 266 RSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
M++ADFGL R + + T ++APE + T + DV+SFG++L ++ T
Sbjct: 189 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + ++ GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 146 ELKIADFGWSVHAPSSRRAAL----CGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 200
Query: 566 TGRKVVDATHSDPEY 580
G+ +A Y
Sbjct: 201 VGKPPFEANTYQETY 215
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V + M++ADFGL R + + T ++APE + T + DV+SFG++L
Sbjct: 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 283
Query: 562 MDLIT 566
++ T
Sbjct: 284 WEIFT 288
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + + GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 151 ELKIADFGWSVHAPSSRR----XXLXGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 205
Query: 566 TGRKVVDATHSDPEY 580
G+ +A Y
Sbjct: 206 VGKPPFEANTYQETY 220
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 35/60 (58%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++++D GL R V + +L ++APE I+ G+ + D++S+G++L ++ +
Sbjct: 166 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 35/60 (58%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++++D GL R V + +L ++APE I+ G+ + D++S+G++L ++ +
Sbjct: 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
++VADFGL RL+ + T AG + APE + + + K DV++FG++L ++
Sbjct: 396 VKVADFGLSRLMTGD----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 451
Query: 565 IT 566
T
Sbjct: 452 AT 453
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
++VADFGL RL+ + T AG + APE + + + K DV++FG++L ++
Sbjct: 357 VKVADFGLSRLMTGD----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412
Query: 565 IT 566
T
Sbjct: 413 AT 414
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGT--FGYLAPEYIVTGRITAKVDV 554
N+ LD R +++ DFGL + VPE ++ + + + F Y APE + + DV
Sbjct: 142 NVLLDNDRL--VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKECKFYYASDV 198
Query: 555 YSFGMILMDLIT 566
+SFG+ L +L+T
Sbjct: 199 WSFGVTLYELLT 210
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
++VADFGL RL+ + T AG + APE + + + K DV++FG++L ++
Sbjct: 354 VKVADFGLSRLMTGD----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 409
Query: 565 IT 566
T
Sbjct: 410 AT 411
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 508 MRVADFGLVRLVPENGKH-SILTKVAGTFGYLAPEYIVTGR-ITAKVDVYSFGMILMDLI 565
+++AD G RL K + L V TF Y APE ++ R T +D+++ G I +L+
Sbjct: 171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 230
Query: 566 TGRKVVDATHSD 577
T + D
Sbjct: 231 TSEPIFHCRQED 242
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 500 LDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFG 558
L V ++++ DFGL R + +T T Y APE ++ VD++S G
Sbjct: 162 LAVNEDSELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 216
Query: 559 MILMDLITGRKVVDAT 574
I+ +L+TGR + T
Sbjct: 217 CIMAELLTGRTLFPGT 232
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAG---TFGYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
+V+DFGL R + EN T G + APE I + T+ D +S+G+++ +++
Sbjct: 158 KVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 217
Query: 566 T 566
+
Sbjct: 218 S 218
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFGL + +G ++ GT Y+APE ++ VD +S G ++ D++TG
Sbjct: 160 VKLTDFGLCKESIHDG--TVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFGL + +G ++ GT Y+APE ++ VD +S G ++ D++TG
Sbjct: 160 VKLTDFGLCKESIHDG--TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++A+FG P + + T + GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 149 ELKIANFGWSVHAPSSRR----TTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 203
Query: 566 TGRKVVDATHSDPEY 580
G+ +A Y
Sbjct: 204 VGKPPFEANTYQETY 218
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGT--FGYLAPEYIVTGRITAKVDV 554
N+ LD R +++ DFGL + VPE ++ + + + F Y APE + + DV
Sbjct: 141 NVLLDNDRL--VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKECKFYYASDV 197
Query: 555 YSFGMILMDLIT 566
+SFG+ L +L+T
Sbjct: 198 WSFGVTLYELLT 209
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 500 LDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFG 558
L V ++++ DFGL R + +T T Y APE ++ VD++S G
Sbjct: 158 LAVNEDSELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 212
Query: 559 MILMDLITGRKVVDAT 574
I+ +L+TGR + T
Sbjct: 213 CIMAELLTGRTLFPGT 228
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + + GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 146 ELKIADFGWSVHAPSSRR----XXLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 200
Query: 566 TGRKVVDATHSDPEY 580
G+ +A Y
Sbjct: 201 VGKPPFEANTYQETY 215
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIV---TGRITAKVDVYSFGMILMDL 564
+++ DFG +++ G+ S++ + GT YLAPE +V T VD +S G+IL
Sbjct: 281 IKITDFGHSKIL---GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 337
Query: 565 ITG 567
++G
Sbjct: 338 LSG 340
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 77/205 (37%), Gaps = 54/205 (26%)
Query: 419 NFSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSVTEQGIAQF---ESEITVLTKGT 474
+F N LG+G VY+ E + G EV +K ++ ++ + G+ Q E +I K
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 475 LGRHLFNWEEEG----------------------LEPLEWNTRLNIA------------- 499
L+N+ E+ ++P N +
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH 131
Query: 500 -----------LDVARGDDMRVADFGLV-RLVPENGKHSILTKVAGTFGYLAPEYIVTGR 547
L + R ++++ADFGL +L + KH L GT Y++PE
Sbjct: 132 GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTL---CGTPNYISPEIATRSA 188
Query: 548 ITAKVDVYSFGMILMDLITGRKVVD 572
+ DV+S G + L+ GR D
Sbjct: 189 HGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + + GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 149 ELKIADFGWSVHAPSSRR----XXLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 203
Query: 566 TGRKVVDATHSDPEY 580
G+ +A Y
Sbjct: 204 VGKPPFEANTYQETY 218
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFGL R N ++T T Y APE I+ A VD++S G I+ +L+ G
Sbjct: 165 LKILDFGLARTACTNF---MMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
Query: 568 RKVVDAT 574
+ T
Sbjct: 222 CVIFQGT 228
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIV---TGRITAKVDVYSFGMILMDL 564
+++ DFG +++ G+ S++ + GT YLAPE +V T VD +S G+IL
Sbjct: 156 IKITDFGHSKIL---GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 212
Query: 565 ITG 567
++G
Sbjct: 213 LSG 215
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAG---TFGYLAPEYIVTGRITAKVD 553
N+ LD R +++ DFGL + VPE G + G F Y APE + + D
Sbjct: 164 NVLLDNDR--LVKIGDFGLAKAVPE-GHEXYRVREDGDSPVFWY-APECLKEYKFYYASD 219
Query: 554 VYSFGMILMDLITGRKVVDATHSDPEYIIHL 584
V+SFG+ L +L+T D++ S P + L
Sbjct: 220 VWSFGVTLYELLTH---CDSSQSPPTKFLEL 247
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIV---TGRITAKVDVYSFGMILMDL 564
+++ DFG +++ G+ S++ + GT YLAPE +V T VD +S G+IL
Sbjct: 295 IKITDFGHSKIL---GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 351
Query: 565 ITG 567
++G
Sbjct: 352 LSG 354
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
++VADFGL RL+ + T AG + APE + + + K DV++FG++L ++
Sbjct: 148 VKVADFGLSRLMTGD----TFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
Query: 565 IT 566
T
Sbjct: 204 AT 205
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 163 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELL 217
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 218 TGRTLFPGT 226
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIV---TGRITAKVDVYSFGMILMDL 564
+++ DFG +++ G+ S++ + GT YLAPE +V T VD +S G+IL
Sbjct: 155 IKITDFGHSKIL---GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 211
Query: 565 ITG 567
++G
Sbjct: 212 LSG 214
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 500 LDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFG 558
L V ++++ DFGL R + +T T Y APE ++ VD++S G
Sbjct: 185 LAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNMTVDIWSVG 239
Query: 559 MILMDLITGRKVVDAT 574
I+ +L+TGR + T
Sbjct: 240 CIMAELLTGRTLFPGT 255
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIV---TGRITAKVDVYSFGMILMDL 564
+++ DFG +++ G+ S++ + GT YLAPE +V T VD +S G+IL
Sbjct: 162 IKITDFGHSKIL---GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 218
Query: 565 ITG 567
++G
Sbjct: 219 LSG 221
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 500 LDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFG 558
L V ++++ DFGL R + +T T Y APE ++ VD++S G
Sbjct: 167 LAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 221
Query: 559 MILMDLITGRKVVDAT 574
I+ +L+TGR + T
Sbjct: 222 CIMAELLTGRTLFPGT 237
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 500 LDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFG 558
L V ++++ DFGL R + +T T Y APE ++ VD++S G
Sbjct: 161 LAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 215
Query: 559 MILMDLITGRKVVDAT 574
I+ +L+TGR + T
Sbjct: 216 CIMAELLTGRTLFPGT 231
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIV---TGRITAKVDVYSFGMILMDL 564
+++ DFG +++ G+ S++ + GT YLAPE +V T VD +S G+IL
Sbjct: 156 IKITDFGHSKIL---GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 212
Query: 565 ITG 567
++G
Sbjct: 213 LSG 215
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 500 LDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFG 558
L V ++++ DFGL R + +T T Y APE ++ VD++S G
Sbjct: 161 LAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 215
Query: 559 MILMDLITGRKVVDAT 574
I+ +L+TGR + T
Sbjct: 216 CIMAELLTGRTLFPGT 231
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + + GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 149 ELKIADFGWSVHAPSSRRDDL----CGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 203
Query: 566 TGRKVVDATHSDPEY 580
G+ +A Y
Sbjct: 204 VGKPPFEANTYQETY 218
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 500 LDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFG 558
L V ++++ DFGL R + +T T Y APE ++ VD++S G
Sbjct: 156 LAVNEDSELKILDFGLCRHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 559 MILMDLITGRKVVDAT 574
I+ +L+TGR + T
Sbjct: 211 CIMAELLTGRTLFPGT 226
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIV---TGRITAKVDVYSFGMILMDL 564
+++ DFG +++ G+ S++ + GT YLAPE +V T VD +S G+IL
Sbjct: 156 IKITDFGHSKIL---GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 212
Query: 565 ITG 567
++G
Sbjct: 213 LSG 215
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 497 NIALDVARGDDM-RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVY 555
N+ L+ D + ++ DFGL V EN K + + GT Y+APE ++ + K DV+
Sbjct: 166 NLLLESKEKDALIKIVDFGL-SAVFENQKK--MKERLGTAYYIAPE-VLRKKYDEKCDVW 221
Query: 556 SFGMILMDLITG 567
S G+IL L+ G
Sbjct: 222 SIGVILFILLAG 233
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V + M++ADFGL R + + T ++APE + T + DV+SFG+++
Sbjct: 177 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 236
Query: 562 MDLIT 566
++ T
Sbjct: 237 WEIFT 241
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 89/220 (40%), Gaps = 59/220 (26%)
Query: 415 NATNNFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGS------------------- 454
++++ F + +LG G TVYKG K G V +K ++L S
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 455 ----VTEQGIAQFESEITVL---------------TKGTLGRHL-------FNWEE-EGL 487
V + E+++T++ T G R L F W+ +GL
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 488 EPLEWNTRLNIALD-----VARGDDMRVADFGLVRL--VPENGKHSILTKVAGTFGYLAP 540
N L+ L + + +++ DFGL R +P N + T Y AP
Sbjct: 122 AFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN----TFSSEVVTLWYRAP 177
Query: 541 EYIVTGR-ITAKVDVYSFGMILMDLITGRKVVDATHSDPE 579
+ ++ R + +D++S G IL ++ITG+ + T+ + +
Sbjct: 178 DVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQ 217
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 63/125 (50%), Gaps = 19/125 (15%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLI 565
++++ADFG P + + ++ GT YL PE ++ GR+ KVD++S G++ + +
Sbjct: 150 ELKIADFGWSVHAPSSRRDTL----CGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFL 204
Query: 566 TGRKVVDATHSDPEYIIHLATWFQKMHKNHDTF-----QMAIDKTIQLDEENLANVSTVA 620
G +A H+ E ++++ + TF + A D +L + N + T+A
Sbjct: 205 VGMPPFEA-HTYQET-------YRRISRVEFTFPDFVTEGARDLISRLLKHNASQRLTLA 256
Query: 621 ELGDH 625
E+ +H
Sbjct: 257 EVLEH 261
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V + M++ADFGL R + + T ++APE + T + DV+SFG+++
Sbjct: 179 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 238
Query: 562 MDLIT 566
++ T
Sbjct: 239 WEIFT 243
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
M++ADFGL R + T ++APE + T + DV+SFG++L ++ T
Sbjct: 189 MKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V + M++ADFGL R + + T ++APE + T + DV+SFG+++
Sbjct: 182 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 241
Query: 562 MDLIT 566
++ T
Sbjct: 242 WEIFT 246
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V + M++ADFGL R + + T ++APE + T + DV+SFG+++
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 562 MDLIT 566
++ T
Sbjct: 250 WEIFT 254
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAG---TFGYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
+V+DFGL R + ++ T G + APE I + T+ DV+S+G+++ +++
Sbjct: 149 KVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 208
Query: 566 T--GRKVVDATHSD 577
+ R D T+ D
Sbjct: 209 SYGERPYWDMTNQD 222
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 500 LDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFG 558
L V ++++ DFGL R + +T T Y APE ++ VD++S G
Sbjct: 156 LAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 559 MILMDLITGRKVVDAT 574
I+ +L+TGR + T
Sbjct: 211 CIMAELLTGRTLFPGT 226
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+V+DFGL R++ E+ ++ T G + APE I + T+ DV+S+G+++ ++++
Sbjct: 185 KVSDFGLSRVI-EDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V + M++ADFGL R + + T ++APE + T + DV+SFG+++
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 562 MDLIT 566
++ T
Sbjct: 250 WEIFT 254
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 170 ELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 224
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 225 TGRTLFPGT 233
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 170 ELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 224
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 225 TGRTLFPGT 233
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAG---TFGYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
+V+DFGL R + ++ T G + APE I + T+ DV+S+G+++ +++
Sbjct: 175 KVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 234
Query: 566 T--GRKVVDATHSD 577
+ R D T+ D
Sbjct: 235 SYGERPYWDMTNQD 248
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V + M++ADFGL R + + T ++APE + T + DV+SFG+++
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 562 MDLIT 566
++ T
Sbjct: 250 WEIFT 254
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V + M++ADFGL R + + T ++APE + T + DV+SFG+++
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 562 MDLIT 566
++ T
Sbjct: 250 WEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V + M++ADFGL R + + T ++APE + T + DV+SFG+++
Sbjct: 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 295
Query: 562 MDLIT 566
++ T
Sbjct: 296 WEIFT 300
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 170 ELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 224
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 225 TGRTLFPGT 233
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+V+DFGL R++ E+ + T G + APE I + T+ DV+SFG+++ +++T
Sbjct: 187 KVSDFGLSRVL-EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 169 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 224 TGRTLFPGT 232
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V + M++ADFGL R + + T ++APE + T + DV+SFG+++
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 562 MDLIT 566
++ T
Sbjct: 250 WEIFT 254
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
++VADFGL RL+ + T AG + APE + + + K DV++FG++L ++
Sbjct: 155 VKVADFGLSRLMTGD----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 565 IT 566
T
Sbjct: 211 AT 212
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 169 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 224 TGRTLFPGT 232
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
++VADFGL RL+ + T AG + APE + + + K DV++FG++L ++
Sbjct: 155 VKVADFGLSRLMTGD----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 565 IT 566
T
Sbjct: 211 AT 212
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
++VADFGL RL+ + T AG + APE + + + K DV++FG++L ++
Sbjct: 150 VKVADFGLSRLMTGD----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 565 IT 566
T
Sbjct: 206 AT 207
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
++VADFGL RL+ + T AG + APE + + + K DV++FG++L ++
Sbjct: 163 VKVADFGLSRLMTGD----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 218
Query: 565 IT 566
T
Sbjct: 219 AT 220
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
++VADFGL RL+ + T AG + APE + + + K DV++FG++L ++
Sbjct: 152 VKVADFGLSRLMTGD----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
Query: 565 IT 566
T
Sbjct: 208 AT 209
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
++VADFGL RL+ + T AG + APE + + + K DV++FG++L ++
Sbjct: 150 VKVADFGLSRLMTGD----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 565 IT 566
T
Sbjct: 206 AT 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
++VADFGL RL+ + T AG + APE + + + K DV++FG++L ++
Sbjct: 150 VKVADFGLSRLMTGD----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 565 IT 566
T
Sbjct: 206 AT 207
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
++VADFGL RL+ + T AG + APE + + + K DV++FG++L ++
Sbjct: 151 VKVADFGLSRLMTGD----TYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
Query: 565 IT 566
T
Sbjct: 207 AT 208
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
++VADFGL RL+ + T AG + APE + + + K DV++FG++L ++
Sbjct: 150 VKVADFGLSRLMTGD----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 565 IT 566
T
Sbjct: 206 AT 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
++VADFGL RL+ + T AG + APE + + + K DV++FG++L ++
Sbjct: 152 VKVADFGLSRLMTGD----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
Query: 565 IT 566
T
Sbjct: 208 AT 209
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
++VADFGL RL+ + T AG + APE + + + K DV++FG++L ++
Sbjct: 152 VKVADFGLSRLMTGD----TYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
Query: 565 IT 566
T
Sbjct: 208 AT 209
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 165 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 219
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 220 TGRTLFPGT 228
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 182 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 236
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 237 TGRTLFPGT 245
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
++VADFGL RL+ + T AG + APE + + + K DV++FG++L ++
Sbjct: 154 VKVADFGLSRLMTGD----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 209
Query: 565 IT 566
T
Sbjct: 210 AT 211
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
++VADFGL RL+ + T AG + APE + + + K DV++FG++L ++
Sbjct: 155 VKVADFGLSRLMTGD----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 565 IT 566
T
Sbjct: 211 AT 212
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 173 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 227
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 228 TGRTLFPGT 236
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 183 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 237
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 238 TGRTLFPGT 246
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 32/65 (49%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
+ G ++ DFGL R + + + + ++APE I T + DV+S+G+ L
Sbjct: 201 LTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFL 260
Query: 562 MDLIT 566
+L +
Sbjct: 261 WELFS 265
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V + M++ADFGL R + + T ++APE + T + DV+SFG+++
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 562 MDLIT 566
++ T
Sbjct: 250 WEIFT 254
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 175 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 229
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 230 TGRTLFPGT 238
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 163 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 218 TGRTLFPGT 226
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 175 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 229
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 230 TGRTLFPGT 238
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 168 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 222
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 223 TGRTLFPGT 231
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 162 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 216
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 217 TGRTLFPGT 225
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
++VADFGL RL+ + T AG + APE + + + K DV++FG++L ++
Sbjct: 155 VKVADFGLSRLMTGD----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 565 IT 566
T
Sbjct: 211 AT 212
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 163 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 218 TGRTLFPGT 226
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 40/64 (62%), Gaps = 6/64 (9%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITA--KVDVYSFGMILMDL 564
++++ADFGL ++ + + L G+ Y APE ++ G++ A +VDV+S G++L +
Sbjct: 146 NVKIADFGLSNIMTDG---NFLKTSCGSPNYAAPE-VINGKLYAGPEVDVWSCGIVLYVM 201
Query: 565 ITGR 568
+ GR
Sbjct: 202 LVGR 205
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
++VADFGL RL+ + T AG + APE + + + K DV++FG++L ++
Sbjct: 148 VKVADFGLSRLMTGD----TXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
Query: 565 IT 566
T
Sbjct: 204 AT 205
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 163 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 218 TGRTLFPGT 226
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 175 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 229
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 230 TGRTLFPGT 238
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 163 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 218 TGRTLFPGT 226
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 169 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 224 TGRTLFPGT 232
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 182 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 236
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 237 TGRTLFPGT 245
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 163 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 218 TGRTLFPGT 226
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 170 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 224
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 225 TGRTLFPGT 233
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 163 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 218 TGRTLFPGT 226
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 165 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 219
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 220 TGRTLFPGT 228
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 165 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 219
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 220 TGRTLFPGT 228
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 183 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 237
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 238 TGRTLFPGT 246
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 174 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 228
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 229 TGRTLFPGT 237
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
++VADFGL RL+ + T AG + APE + + + K DV++FG++L ++
Sbjct: 148 VKVADFGLSRLMTGD----TXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
Query: 565 IT 566
T
Sbjct: 204 AT 205
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 163 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 218 TGRTLFPGT 226
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
++VADFGL RL+ + T AG + APE + + + K DV++FG++L ++
Sbjct: 150 VKVADFGLSRLMTGD----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 565 IT 566
T
Sbjct: 206 AT 207
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V+ D +++ DFGL R + E+ + +K ++APE I R T+ DV+ FG+ +
Sbjct: 141 VSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 199
Query: 562 MDLI 565
+++
Sbjct: 200 WEIL 203
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
++VADFGL RL+ + T AG + APE + + + K DV++FG++L ++
Sbjct: 151 VKVADFGLSRLMTGD----TXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
Query: 565 IT 566
T
Sbjct: 207 AT 208
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 160 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 214
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 215 TGRTLFPGT 223
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
++++ DFG RL P + + L T Y APE + D++S G+IL +++
Sbjct: 147 EIKIIDFGFARLKPPDNQ--PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLS 204
Query: 567 GR 568
G+
Sbjct: 205 GQ 206
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 186 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 240
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 241 TGRTLFPGT 249
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 159 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 213
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 214 TGRTLFPGT 222
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGT-FGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+V+DFGL R++ ++ + + T+ + +PE I + T+ DV+S+G++L ++++
Sbjct: 187 KVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
++VADFGL RL+ + T AG + APE + + + K DV++FG++L ++
Sbjct: 155 VKVADFGLSRLMTGD----TXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 565 IT 566
T
Sbjct: 211 AT 212
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 168 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 222
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 223 TGRTLFPGT 231
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 163 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 218 TGRTLFPGT 226
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 161 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 215
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 216 TGRTLFPGT 224
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
++VADFGL RL+ + T AG + APE + + + K DV++FG++L ++
Sbjct: 150 VKVADFGLSRLMTGD----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 565 IT 566
T
Sbjct: 206 AT 207
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 163 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 218 TGRTLFPGT 226
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V+ D +++ DFGL R + E+ + +K ++APE I R T+ DV+ FG+ +
Sbjct: 146 VSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 204
Query: 562 MDLI 565
+++
Sbjct: 205 WEIL 208
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V +++ADFGL R+ LT V T Y APE ++ VD++S G I
Sbjct: 153 VTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIF 209
Query: 562 MDLI 565
++
Sbjct: 210 AEMF 213
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 160 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 214
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 215 TGRTLFPGT 223
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGR---ITAKVD 553
NI LD + + DF + ++P + + +T +AGT Y+APE + + + VD
Sbjct: 145 NILLD--EHGHVHITDFNIAAMLP---RETQITTMAGTKPYMAPEMFSSRKGAGYSFAVD 199
Query: 554 VYSFGMILMDLITGRK 569
+S G+ +L+ GR+
Sbjct: 200 WWSLGVTAYELLRGRR 215
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V+ D +++ DFGL R + E+ + +K ++APE I R T+ DV+ FG+ +
Sbjct: 147 VSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 205
Query: 562 MDLI 565
+++
Sbjct: 206 WEIL 209
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V G +++ADFGL R+ L V T Y APE ++ VD++S G I
Sbjct: 145 VTSGGTVKLADFGLARIY---SYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIF 201
Query: 562 MDLI 565
++
Sbjct: 202 AEMF 205
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 163 ELKILDFGLARHTDDE-----MTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 218 TGRTLFPGT 226
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGT-FGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+V+DFGL R++ ++ + + T+ + APE I + T+ DV+S+G+++ ++++
Sbjct: 164 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 159 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 213
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 214 TGRTLFPGT 222
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFGL R N ++T T Y APE I+ VD++S G I+ +L+ G
Sbjct: 163 LKILDFGLARTASTNF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
Query: 568 RKVVDAT 574
+ T
Sbjct: 220 SVIFQGT 226
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V+ D +++ DFGL R + E+ + +K ++APE I R T+ DV+ FG+ +
Sbjct: 144 VSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 202
Query: 562 MDLI 565
+++
Sbjct: 203 WEIL 206
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 159 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 213
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 214 TGRTLFPGT 222
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG +++ K + GT Y++PE + + D+++ G I+ L+ G
Sbjct: 171 IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
Query: 568 RKVVDATHSDPEYIIHLATWFQKMHK 593
A + EY+I FQK+ K
Sbjct: 231 LPPFRAGN---EYLI-----FQKIIK 248
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V+ D +++ DFGL R + E+ + +K ++APE I R T+ DV+ FG+ +
Sbjct: 144 VSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 202
Query: 562 MDLI 565
+++
Sbjct: 203 WEIL 206
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V+ D +++ DFGL R + E+ + +K ++APE I R T+ DV+ FG+ +
Sbjct: 172 VSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 230
Query: 562 MDLI 565
+++
Sbjct: 231 WEIL 234
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 32/65 (49%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
+ G ++ DFGL R + + + + ++APE I T + DV+S+G+ L
Sbjct: 194 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFL 253
Query: 562 MDLIT 566
+L +
Sbjct: 254 WELFS 258
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V+ D +++ DFGL R + E+ + +K ++APE I R T+ DV+ FG+ +
Sbjct: 149 VSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 207
Query: 562 MDLI 565
+++
Sbjct: 208 WEIL 211
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 40/209 (19%), Positives = 82/209 (39%), Gaps = 50/209 (23%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQ---------------------GIAQ 462
LG G G V G+ + +V +K ++ GS++E G+
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 463 FESEITVLTKGTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDD--------------- 507
+ I ++T+ L N+ E + L + DV +
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 149
Query: 508 ---------MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYS 556
++V+DFGL R V ++ + S V F + PE ++ + ++K D+++
Sbjct: 150 NCLVNDQGVVKVSDFGLSRYVLDDEETS---SVGSKFPVRWSPPEVLMYSKFSSKSDIWA 206
Query: 557 FGMILMDLITGRKVVDATHSDPEYIIHLA 585
FG+++ ++ + K+ ++ E H+A
Sbjct: 207 FGVLMWEIYSLGKMPYERFTNSETAEHIA 235
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V + M++ADFGL R + T ++APE + T + DV+SFG+++
Sbjct: 190 VTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 562 MDLIT 566
++ T
Sbjct: 250 WEIFT 254
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V+ D +++ DFGL R + E+ + +K ++APE I R T+ DV+ FG+ +
Sbjct: 524 VSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 582
Query: 562 MDLI 565
+++
Sbjct: 583 WEIL 586
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V + M++ADFGL R + T ++APE + T + DV+SFG+++
Sbjct: 190 VTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 562 MDLIT 566
++ T
Sbjct: 250 WEIFT 254
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
VA +++ DFG+ R + E + K ++APE + G T D++SFG++L
Sbjct: 163 VAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 222
Query: 562 MDLIT 566
++ +
Sbjct: 223 WEITS 227
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 35.4 bits (80), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYS 556
NI LD +++ DFGL + ++ K + GT Y+APE + T D +S
Sbjct: 156 NILLD--EEGHIKLTDFGLSKESIDHEKKAY--SFCGTVEYMAPEVVNRRGHTQSADWWS 211
Query: 557 FGMILMDLITG 567
FG+++ +++TG
Sbjct: 212 FGVLMFEMLTG 222
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 32/65 (49%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
+ G ++ DFGL R + + + + ++APE I T + DV+S+G+ L
Sbjct: 196 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFL 255
Query: 562 MDLIT 566
+L +
Sbjct: 256 WELFS 260
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 15/82 (18%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPEN------------GKHSILTKVAGTFGYLAPEYIV 544
NI +D +R ++++ DFGL + V + G LT GT Y+A E +
Sbjct: 146 NIFIDESR--NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLD 203
Query: 545 -TGRITAKVDVYSFGMILMDLI 565
TG K+D YS G+I + I
Sbjct: 204 GTGHYNEKIDXYSLGIIFFEXI 225
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 85/202 (42%), Gaps = 51/202 (25%)
Query: 414 RNATNNFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMEL-------------------- 452
R + + + RLGRG G V++ E K G + VK++ L
Sbjct: 70 REEVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTSPRIV 129
Query: 453 ---GSVTEQGIAQFESEITVLTKGTLG------------RHLFNWEEEGLEPLEW-NTRL 496
G+V E E+ L G+LG R L+ + + LE LE+ ++R
Sbjct: 130 PLYGAVREGPWVNIFMEL--LEGGSLGQLVKEQGCLPEDRALY-YLGQALEGLEYLHSRR 186
Query: 497 NIALDV--------ARGDDMRVADFG-LVRLVPENGKHSILTK--VAGTFGYLAPEYIVT 545
+ DV + G + DFG V L P+ +LT + GT ++APE ++
Sbjct: 187 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLG 246
Query: 546 GRITAKVDVYSFGMILMDLITG 567
AKVDV+S +++ ++ G
Sbjct: 247 RSCDAKVDVWSSCCMMLHMLNG 268
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 506 DDMRVADFGLVR-LVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
+ +R+ DFG + L ENG +L T ++APE + A D++S G++L +
Sbjct: 157 ESIRICDFGFAKQLRAENG---LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTM 213
Query: 565 ITG 567
+TG
Sbjct: 214 LTG 216
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFG+ R V + + ++ PE I+ + T + DV+SFG+IL ++ T
Sbjct: 172 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG +++ K + GT Y++PE + D+++ G I+ L+ G
Sbjct: 174 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
Query: 568 RKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAI 602
A + EY+I FQK+ K F A
Sbjct: 234 LPPFRAGN---EYLI-----FQKIIKLEYDFPAAF 260
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 33/129 (25%)
Query: 467 ITVLTKGTLGRHLFNWEEE------------------GLEPLEWNTRL-------NIALD 501
+T++ G + H++N +E+ GLE L + N+ LD
Sbjct: 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLD 323
Query: 502 VARGDD--MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGM 559
DD +R++D GL V + AGT G++APE ++ VD ++ G+
Sbjct: 324 ----DDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGV 377
Query: 560 ILMDLITGR 568
L ++I R
Sbjct: 378 TLYEMIAAR 386
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 32/65 (49%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
+ G ++ DFGL R + + + + ++APE I T + DV+S+G+ L
Sbjct: 201 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFL 260
Query: 562 MDLIT 566
+L +
Sbjct: 261 WELFS 265
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 33/65 (50%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
+ G ++ DFGL R + + + + ++APE I T + DV+S+G++L
Sbjct: 199 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 258
Query: 562 MDLIT 566
++ +
Sbjct: 259 WEIFS 263
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 33/129 (25%)
Query: 467 ITVLTKGTLGRHLFNWEEE------------------GLEPLEWNTRL-------NIALD 501
+T++ G + H++N +E+ GLE L + N+ LD
Sbjct: 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLD 323
Query: 502 VARGDD--MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGM 559
DD +R++D GL V + AGT G++APE ++ VD ++ G+
Sbjct: 324 ----DDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGV 377
Query: 560 ILMDLITGR 568
L ++I R
Sbjct: 378 TLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 33/129 (25%)
Query: 467 ITVLTKGTLGRHLFNWEEE------------------GLEPLEWNTRL-------NIALD 501
+T++ G + H++N +E+ GLE L + N+ LD
Sbjct: 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLD 323
Query: 502 VARGDD--MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGM 559
DD +R++D GL V + AGT G++APE ++ VD ++ G+
Sbjct: 324 ----DDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGV 377
Query: 560 ILMDLITGR 568
L ++I R
Sbjct: 378 TLYEMIAAR 386
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFGL R G ++T T Y APE I+ VD++S G+I+ ++I G
Sbjct: 165 LKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYS 556
NI LD +++ DFGL + ++ K + GT Y+APE + T D +S
Sbjct: 157 NILLD--EEGHIKLTDFGLSKESIDHEKKAY--SFCGTVEYMAPEVVNRRGHTQSADWWS 212
Query: 557 FGMILMDLITG 567
FG+++ +++TG
Sbjct: 213 FGVLMFEMLTG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYS 556
NI LD +++ DFGL + ++ K + GT Y+APE + T D +S
Sbjct: 156 NILLD--EEGHIKLTDFGLSKESIDHEKKAY--SFCGTVEYMAPEVVNRRGHTQSADWWS 211
Query: 557 FGMILMDLITG 567
FG+++ +++TG
Sbjct: 212 FGVLMFEMLTG 222
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V +++ADFGL R+ LT V T Y APE ++ VD++S G I
Sbjct: 153 VTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIF 209
Query: 562 MDLI 565
++
Sbjct: 210 AEMF 213
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 497 NIALDVARGD-DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVY 555
N+ L+ D ++R+ DFGL + K + GT Y+APE ++ G K DV+
Sbjct: 162 NLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPE-VLHGTYDEKCDVW 217
Query: 556 SFGMILMDLITG 567
S G+IL L++G
Sbjct: 218 STGVILYILLSG 229
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 33/129 (25%)
Query: 467 ITVLTKGTLGRHLFNWEEE------------------GLEPLEWNTRL-------NIALD 501
+T++ G + H++N +E+ GLE L + N+ LD
Sbjct: 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLD 323
Query: 502 VARGDD--MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGM 559
DD +R++D GL V + AGT G++APE ++ VD ++ G+
Sbjct: 324 ----DDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGV 377
Query: 560 ILMDLITGR 568
L ++I R
Sbjct: 378 TLYEMIAAR 386
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGT-FGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+V+DFGL R++ ++ + + T+ + +PE I + T+ DV+S+G++L ++++
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGT-FGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+V+DFGL R++ ++ + + T+ + +PE I + T+ DV+S+G++L ++++
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 32/65 (49%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
+ G ++ DFGL R + + + + ++APE I T + DV+S+G+ L
Sbjct: 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFL 237
Query: 562 MDLIT 566
+L +
Sbjct: 238 WELFS 242
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGT-FGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+V+DFGL R++ ++ + + T+ + +PE I + T+ DV+S+G++L ++++
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGT-FGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+V+DFGL R++ ++ + + T+ + +PE I + T+ DV+S+G++L ++++
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGT-FGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+V+DFGL R++ ++ + + T+ + +PE I + T+ DV+S+G++L ++++
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGT-FGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+V+DFGL R++ ++ + + T+ + +PE I + T+ DV+S+G++L ++++
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGT-FGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+V+DFGL R++ ++ + + T+ + +PE I + T+ DV+S+G++L ++++
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
VA +++ DFG+ R + E + K +++PE + G T DV+SFG++L
Sbjct: 158 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 217
Query: 562 MDLIT 566
++ T
Sbjct: 218 WEIAT 222
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V G +++ADFGL R+ L V T Y APE ++ VD++S G I
Sbjct: 145 VTSGGTVKLADFGLARIY---SYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIF 201
Query: 562 MDLI 565
++
Sbjct: 202 AEMF 205
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
VA +++ DFG+ R + E + K +++PE + G T DV+SFG++L
Sbjct: 171 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 230
Query: 562 MDLIT 566
++ T
Sbjct: 231 WEIAT 235
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGT-FGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+V+DFGL R++ ++ + + T+ + +PE I + T+ DV+S+G++L ++++
Sbjct: 158 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFGL R G ++T T Y APE I+ VD++S G+I+ ++I G
Sbjct: 165 LKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
VA +++ DFG+ R + E + K +++PE + G T DV+SFG++L
Sbjct: 158 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 217
Query: 562 MDLIT 566
++ T
Sbjct: 218 WEIAT 222
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYS 556
N+ LD + +++ DFGL + ++G + + GT YLAPE + VD +
Sbjct: 282 NLMLD--KDGHIKITDFGLCKEGIKDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG 337
Query: 557 FGMILMDLITGR 568
G+++ +++ GR
Sbjct: 338 LGVVMYEMMCGR 349
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 33/65 (50%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
+ G ++ DFGL R + + + + ++APE I T + DV+S+G++L
Sbjct: 191 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 250
Query: 562 MDLIT 566
++ +
Sbjct: 251 WEIFS 255
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGT-FGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+V+DFGL R++ ++ + + T+ + +PE I + T+ DV+S+G++L ++++
Sbjct: 158 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
VA +++ DFG+ R + E + K +++PE + G T DV+SFG++L
Sbjct: 162 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 221
Query: 562 MDLIT 566
++ T
Sbjct: 222 WEIAT 226
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGT-FGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+V+DFGL R++ ++ + + T+ + +PE I + T+ DV+S+G++L ++++
Sbjct: 185 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGT-FGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+V+DFGL R++ ++ + + T+ + +PE I + T+ DV+S+G++L ++++
Sbjct: 175 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 33/65 (50%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
+ G ++ DFGL R + + + + ++APE I T + DV+S+G++L
Sbjct: 185 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 244
Query: 562 MDLIT 566
++ +
Sbjct: 245 WEIFS 249
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 414 RNATNNFSEENRLGRGGVGTVYKGELKD---GTEVGVKRMEL------------------ 452
R + + + RLGRG G V++ +KD G + VK++ L
Sbjct: 68 REEVHWMTHQPRLGRGSFGEVHR--MKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPR 125
Query: 453 -----GSVTEQGIAQFESEITVLTKGTLG------------RHLFNWEEEGLEPLEW-NT 494
G+V E E+ L G+LG R L+ + + LE LE+ +T
Sbjct: 126 IVPLYGAVREGPWVNIFMEL--LEGGSLGQLIKQMGCLPEDRALY-YLGQALEGLEYLHT 182
Query: 495 RLNIALDV--------ARGDDMRVADFG-LVRLVPENGKHSILTK--VAGTFGYLAPEYI 543
R + DV + G + DFG + L P+ S+LT + GT ++APE +
Sbjct: 183 RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV 242
Query: 544 VTGRITAKVDVYSFGMILMDLITG 567
+ AKVD++S +++ ++ G
Sbjct: 243 MGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V +++ADFGL R+ LT V T Y APE ++ VD++S G I
Sbjct: 153 VTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIF 209
Query: 562 MDLI 565
++
Sbjct: 210 AEMF 213
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
VA +++ DFG+ R + E + K +++PE + G T DV+SFG++L
Sbjct: 165 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 224
Query: 562 MDLIT 566
++ T
Sbjct: 225 WEIAT 229
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
VA +++ DFG+ R + E + K +++PE + G T DV+SFG++L
Sbjct: 164 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 223
Query: 562 MDLIT 566
++ T
Sbjct: 224 WEIAT 228
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V+ D +++ DFGL R + E+ + +K ++APE I R T+ DV+ FG+ +
Sbjct: 144 VSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 202
Query: 562 MDLI 565
+++
Sbjct: 203 WEIL 206
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
VA +++ DFG+ R + E + K +++PE + G T DV+SFG++L
Sbjct: 171 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 230
Query: 562 MDLIT 566
++ T
Sbjct: 231 WEIAT 235
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYS 556
N+ LD + +++ DFGL + ++G + + GT YLAPE + VD +
Sbjct: 279 NLMLD--KDGHIKITDFGLCKEGIKDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG 334
Query: 557 FGMILMDLITGR 568
G+++ +++ GR
Sbjct: 335 LGVVMYEMMCGR 346
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
VA +++ DFG+ R + E + K +++PE + G T DV+SFG++L
Sbjct: 164 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 223
Query: 562 MDLIT 566
++ T
Sbjct: 224 WEIAT 228
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGT-FGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+V+DFG+ R++ ++ + + T+ + APE I + T+ DV+S+G+++ ++++
Sbjct: 171 KVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V G +++ADFGL R+ L V T Y APE ++ VD++S G I
Sbjct: 145 VTSGGTVKLADFGLARIY---SYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIF 201
Query: 562 MDLI 565
++
Sbjct: 202 AEMF 205
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V+ D +++ DFGL R + E+ + +K ++APE I R T+ DV+ FG+ +
Sbjct: 524 VSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 582
Query: 562 MDLI 565
+++
Sbjct: 583 WEIL 586
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 32/62 (51%)
Query: 505 GDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
G ++ DFGL R + + + + ++APE I T + DV+S+G++L ++
Sbjct: 200 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 259
Query: 565 IT 566
+
Sbjct: 260 FS 261
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/209 (18%), Positives = 81/209 (38%), Gaps = 50/209 (23%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQ---------------------GIAQ 462
LG G G V G+ + +V +K ++ GS++E G+
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 463 FESEITVLTKGTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDD--------------- 507
+ I ++T+ L N+ E + L + DV +
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 149
Query: 508 ---------MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYS 556
++V+DFGL R V ++ + V F + PE ++ + ++K D+++
Sbjct: 150 NCLVNDQGVVKVSDFGLSRYVLDD---EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 206
Query: 557 FGMILMDLITGRKVVDATHSDPEYIIHLA 585
FG+++ ++ + K+ ++ E H+A
Sbjct: 207 FGVLMWEIYSLGKMPYERFTNSETAEHIA 235
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 33/65 (50%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
+ G ++ DFGL R + + + + ++APE I T + DV+S+G++L
Sbjct: 197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 256
Query: 562 MDLIT 566
++ +
Sbjct: 257 WEIFS 261
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 33/65 (50%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
+ G ++ DFGL R + + + + ++APE I T + DV+S+G++L
Sbjct: 193 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 252
Query: 562 MDLIT 566
++ +
Sbjct: 253 WEIFS 257
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGT-FGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+V+DFG+ R++ ++ + + T+ + APE I + T+ DV+S+G+++ ++++
Sbjct: 156 KVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 15/107 (14%)
Query: 472 KGTLG-RHLFNW---EEEGLEPLEWNTRLNIALDVARG------DDMRVADFGLVRL--V 519
+G LG + L NW +G+ LE + RL AR + +++ DFGL RL +
Sbjct: 113 RGRLGSQDLLNWCMQIAKGMSYLE-DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDI 171
Query: 520 PENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
E H+ KV ++A E I+ R T + DV+S+G+ + +L+T
Sbjct: 172 DETEYHADGGKVP--IKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/209 (18%), Positives = 81/209 (38%), Gaps = 50/209 (23%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQ---------------------GIAQ 462
LG G G V G+ + +V +K ++ GS++E G+
Sbjct: 14 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 463 FESEITVLTKGTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDD--------------- 507
+ I ++T+ L N+ E + L + DV +
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 133
Query: 508 ---------MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYS 556
++V+DFGL R V ++ + V F + PE ++ + ++K D+++
Sbjct: 134 NCLVNDQGVVKVSDFGLSRYVLDD---EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 190
Query: 557 FGMILMDLITGRKVVDATHSDPEYIIHLA 585
FG+++ ++ + K+ ++ E H+A
Sbjct: 191 FGVLMWEIYSLGKMPYERFTNSETAEHIA 219
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
VA +++ DFG+ R + E + K +++PE + G T DV+SFG++L
Sbjct: 161 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 220
Query: 562 MDLIT 566
++ T
Sbjct: 221 WEIAT 225
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 11/77 (14%)
Query: 497 NIALDVARGDDMRVADFGLV-RLVPENGKHSILTKVAGTFGYLAPEYIVTGR----ITAK 551
NI LD R ++++ DFG+ +LV K T+ AG Y+APE I +
Sbjct: 156 NILLD--RSGNIKLCDFGISGQLVDSIAK----TRDAGCRPYMAPERIDPSASRQGYDVR 209
Query: 552 VDVYSFGMILMDLITGR 568
DV+S G+ L +L TGR
Sbjct: 210 SDVWSLGITLYELATGR 226
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFGL R G ++T T Y APE I+ VD++S G I+ ++I G
Sbjct: 165 LKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFGL R G ++T T Y APE I+ VD++S G I+ ++I G
Sbjct: 166 LKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
VA +++ DFG+ R + E + K ++APE + G T D++SFG++L
Sbjct: 164 VAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 223
Query: 562 MDLIT 566
++ +
Sbjct: 224 WEITS 228
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFGL R G ++T T Y APE I+ VD++S G I+ ++I G
Sbjct: 165 LKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
VA +++ DFG+ R + E + K ++APE + G T D++SFG++L
Sbjct: 163 VAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 222
Query: 562 MDLIT 566
++ +
Sbjct: 223 WEITS 227
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFGL R G ++T T Y APE I+ VD++S G I+ ++I G
Sbjct: 165 LKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG +++ K + GT Y++PE + D+++ G I+ L+ G
Sbjct: 172 IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
Query: 568 RKVVDATHSDPEYIIHLATWFQKMHK 593
A + EY+I FQK+ K
Sbjct: 232 LPPFRAGN---EYLI-----FQKIIK 249
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/209 (18%), Positives = 81/209 (38%), Gaps = 50/209 (23%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQ---------------------GIAQ 462
LG G G V G+ + +V +K ++ GS++E G+
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 463 FESEITVLTKGTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDD--------------- 507
+ I ++T+ L N+ E + L + DV +
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 134
Query: 508 ---------MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYS 556
++V+DFGL R V ++ + V F + PE ++ + ++K D+++
Sbjct: 135 NCLVNDQGVVKVSDFGLSRYVLDD---EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 191
Query: 557 FGMILMDLITGRKVVDATHSDPEYIIHLA 585
FG+++ ++ + K+ ++ E H+A
Sbjct: 192 FGVLMWEIYSLGKMPYERFTNSETAEHIA 220
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ D+GL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 163 ELKILDYGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 218 TGRTLFPGT 226
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 497 NIALDVARGD-DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVY 555
N+ L+ D ++R+ DFGL + K + GT Y+APE ++ G K DV+
Sbjct: 156 NLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPE-VLHGTYDEKCDVW 211
Query: 556 SFGMILMDLITG 567
S G+IL L++G
Sbjct: 212 STGVILYILLSG 223
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
VA +++ DFG+ R + E + K +++PE + G T DV+SFG++L
Sbjct: 193 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 252
Query: 562 MDLIT 566
++ T
Sbjct: 253 WEIAT 257
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG +++ K + GT Y++PE + D+++ G I+ L+ G
Sbjct: 176 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
Query: 568 RKVVDATHSDPEYIIHLATWFQKMHK 593
A + EY+I FQK+ K
Sbjct: 236 LPPFRAGN---EYLI-----FQKIIK 253
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFGL R + +N + ++APE I + K DV+S+G++L ++ +
Sbjct: 238 VKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 497 NIALDVARGD-DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVY 555
N+ L+ D ++R+ DFGL + K + GT Y+APE ++ G K DV+
Sbjct: 179 NLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPE-VLHGTYDEKCDVW 234
Query: 556 SFGMILMDLITG 567
S G+IL L++G
Sbjct: 235 STGVILYILLSG 246
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 31/62 (50%)
Query: 505 GDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
G ++ DFG+ R + G + ++ PE + G T+K D +SFG++L ++
Sbjct: 197 GRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 256
Query: 565 IT 566
+
Sbjct: 257 FS 258
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/209 (18%), Positives = 81/209 (38%), Gaps = 50/209 (23%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQ---------------------GIAQ 462
LG G G V G+ + +V +K ++ GS++E G+
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 463 FESEITVLTKGTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDD--------------- 507
+ I ++T+ L N+ E + L + DV +
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 129
Query: 508 ---------MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYS 556
++V+DFGL R V ++ + V F + PE ++ + ++K D+++
Sbjct: 130 NCLVNDQGVVKVSDFGLSRYVLDD---EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 186
Query: 557 FGMILMDLITGRKVVDATHSDPEYIIHLA 585
FG+++ ++ + K+ ++ E H+A
Sbjct: 187 FGVLMWEIYSLGKMPYERFTNSETAEHIA 215
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
VA +++ DFG+ R + E + K ++APE + G T D++SFG++L
Sbjct: 163 VAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 222
Query: 562 MDLIT 566
++ +
Sbjct: 223 WEITS 227
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFGL R G ++T T Y APE I+ VD++S G I+ ++I G
Sbjct: 165 LKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG +++ K + GT Y++PE + D+++ G I+ L+ G
Sbjct: 149 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
Query: 568 RKVVDATHSDPEYIIHLATWFQKMHK 593
A + EY+I FQK+ K
Sbjct: 209 LPPFRAGN---EYLI-----FQKIIK 226
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGT-FGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+V+DFG+ R++ ++ + + T+ + APE I + T+ DV+S+G+++ ++++
Sbjct: 150 KVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG +++ K + GT Y++PE + D+++ G I+ L+ G
Sbjct: 172 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
Query: 568 RKVVDATHSDPEYIIHLATWFQKMHK 593
A + EY+I FQK+ K
Sbjct: 232 LPPFRAGN---EYLI-----FQKIIK 249
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG +++ K + GT Y++PE + D+++ G I+ L+ G
Sbjct: 171 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
Query: 568 RKVVDATHSDPEYIIHLATWFQKMHK 593
A + EY+I FQK+ K
Sbjct: 231 LPPFRAGN---EYLI-----FQKIIK 248
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 31/62 (50%)
Query: 505 GDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
G ++ DFG+ R + G + ++ PE + G T+K D +SFG++L ++
Sbjct: 220 GRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 279
Query: 565 IT 566
+
Sbjct: 280 FS 281
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 497 NIALDVARGD-DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVY 555
N+ L+ D ++R+ DFGL + K + GT Y+APE ++ G K DV+
Sbjct: 180 NLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPE-VLHGTYDEKCDVW 235
Query: 556 SFGMILMDLITG 567
S G+IL L++G
Sbjct: 236 STGVILYILLSG 247
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG +++ K + GT Y++PE + D+++ G I+ L+ G
Sbjct: 169 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
Query: 568 RKVVDATHSDPEYIIHLATWFQKMHK 593
A + EY+I FQK+ K
Sbjct: 229 LPPFRAGN---EYLI-----FQKIIK 246
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYS 556
NI L ++V DFG + + T + F Y APE I+ R +D++S
Sbjct: 230 NILLKQQGRSGIKVIDFGSSCYEHQR----VYTXIQSRF-YRAPEVILGARYGMPIDMWS 284
Query: 557 FGMILMDLITG 567
G IL +L+TG
Sbjct: 285 LGCILAELLTG 295
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V+ D +++ DFGL R + E+ +K ++APE I R T+ DV+ FG+ +
Sbjct: 144 VSSNDCVKLGDFGLSRYM-EDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 202
Query: 562 MDLI 565
+++
Sbjct: 203 WEIL 206
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG +++ K + GT Y++PE + D+++ G I+ L+ G
Sbjct: 148 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
Query: 568 RKVVDATHSDPEYIIHLATWFQKMHK 593
A + EY+I FQK+ K
Sbjct: 208 LPPFRAGN---EYLI-----FQKIIK 225
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 6/80 (7%)
Query: 503 ARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILM 562
+ +RVADFG H T + T Y PE I+ DV+S G IL
Sbjct: 176 VKNTSIRVADFGSATF-----DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILF 230
Query: 563 DLITGRKVVDATHSDPEYII 582
+ G + TH + E+++
Sbjct: 231 EYYRGFTLFQ-THENREHLV 249
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 508 MRVADFGLVRL--VPENGKHSILTKVAGTFGYLAPEYIV-TGRITAKVDVYSFGMILMDL 564
+++ADFGL R +P T T Y AP+ ++ + + + VD++S G I ++
Sbjct: 158 LKLADFGLARAFGIPVRS----YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEM 213
Query: 565 ITGRKVVDATHSD 577
ITG+ + D
Sbjct: 214 ITGKPLFPGVTDD 226
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG +++ K + GT Y++PE + D+++ G I+ L+ G
Sbjct: 171 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
Query: 568 RKVVDATHSDPEYIIHLATWFQKMHK 593
A + EY+I FQK+ K
Sbjct: 231 LPPFRAGN---EYLI-----FQKIIK 248
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFGL R G ++T T Y APE I+ VD++S G I+ ++I G
Sbjct: 165 LKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG +++ K + GT Y++PE + D+++ G I+ L+ G
Sbjct: 169 IQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
Query: 568 RKVVDATHSDPEYIIHLATWFQKMHK 593
A + EY+I FQK+ K
Sbjct: 229 LPPFRAGN---EYLI-----FQKIIK 246
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGT-FGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+V+DFGL R++ ++ + + T+ + +PE I + T+ DV+S+G++L ++++
Sbjct: 187 KVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
VA +++ DFG+ R + E + K ++APE + G T D++SFG++L
Sbjct: 162 VAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 221
Query: 562 MDLIT 566
++ +
Sbjct: 222 WEITS 226
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
VA +++ DFG+ R + E K +++PE + G T DV+SFG++L
Sbjct: 156 VAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 215
Query: 562 MDLIT 566
++ T
Sbjct: 216 WEIAT 220
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG +++ K + GT Y++PE + D+++ G I+ L+ G
Sbjct: 169 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
Query: 568 RKVVDATHSDPEYIIHLATWFQKMHK 593
A + EY+I FQK+ K
Sbjct: 229 LPPFRAGN---EYLI-----FQKIIK 246
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 6/80 (7%)
Query: 503 ARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILM 562
+ +RVADFG H T + T Y PE I+ DV+S G IL
Sbjct: 185 VKNTSIRVADFGSATF-----DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILF 239
Query: 563 DLITGRKVVDATHSDPEYII 582
+ G + TH + E+++
Sbjct: 240 EYYRGFTLFQ-THENREHLV 258
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG +++ K + GT Y++PE + D+++ G I+ L+ G
Sbjct: 169 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
Query: 568 RKVVDATHSDPEYIIHLATWFQKMHK 593
A + EY+I FQK+ K
Sbjct: 229 LPPFRAGN---EYLI-----FQKIIK 246
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG +++ K + GT Y++PE + D+++ G I+ L+ G
Sbjct: 171 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
Query: 568 RKVVDATHSDPEYIIHLATWFQKMHK 593
A + EY+I FQK+ K
Sbjct: 231 LPPFRAGN---EYLI-----FQKIIK 248
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
VA +++ DFG+ R + E K +++PE + G T DV+SFG++L
Sbjct: 165 VAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 224
Query: 562 MDLIT 566
++ T
Sbjct: 225 WEIAT 229
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYS 556
N+ LD + +++ DFGL + ++G + + GT YLAPE + VD +
Sbjct: 141 NLMLD--KDGHIKITDFGLCKEGIKDG--ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 196
Query: 557 FGMILMDLITGR 568
G+++ +++ GR
Sbjct: 197 LGVVMYEMMCGR 208
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYS 556
NI L ++V DFG + + T + F Y APE I+ R +D++S
Sbjct: 230 NILLKQQGRSGIKVIDFGSSCYEHQR----VYTXIQSRF-YRAPEVILGARYGMPIDMWS 284
Query: 557 FGMILMDLITG 567
G IL +L+TG
Sbjct: 285 LGCILAELLTG 295
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 415 NATNNFSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSVTE-QGIAQFESEITVLTK 472
N NF E ++GRG VY+ L DG V +K++++ + + + A EI +L K
Sbjct: 29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLL-K 87
Query: 473 GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDDMR--VADF-GLVRLVPENGKHSILT 529
++ + +E + LNI L++A D+ + F RL+PE
Sbjct: 88 QLNHPNVIKYYASFIE----DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFV 143
Query: 530 KVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMI-LMDLITGR 568
++ ++ ++ I A V + + G++ L DL GR
Sbjct: 144 QLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGR 184
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 508 MRVADFGLVRL--VPENGKHSILTKVAGTFGYLAPEYIV-TGRITAKVDVYSFGMILMDL 564
+++ADFGL R +P T T Y AP+ ++ + + + VD++S G I ++
Sbjct: 158 LKLADFGLARAFGIPVRS----YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEM 213
Query: 565 ITGRKVVDATHSD 577
ITG+ + D
Sbjct: 214 ITGKPLFPGVTDD 226
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG + E H+ LT+ T Y+APE + + D++S G+I+ L+ G
Sbjct: 157 LKLTDFGFAK---ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYS 556
N+ LD + +++ DFGL + ++G + + GT YLAPE + VD +
Sbjct: 139 NLMLD--KDGHIKITDFGLCKEGIKDG--ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 194
Query: 557 FGMILMDLITGR 568
G+++ +++ GR
Sbjct: 195 LGVVMYEMMCGR 206
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 506 DDMRVADFGLVR-LVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
+ +R+ DFG + L ENG +L T ++APE + A D++S G++L
Sbjct: 157 ESIRICDFGFAKQLRAENG---LLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTX 213
Query: 565 ITG 567
+TG
Sbjct: 214 LTG 216
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG +++ K + GT Y++PE + D+++ G I+ L+ G
Sbjct: 147 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
Query: 568 RKVVDATHSDPEYIIHLATWFQKMHK 593
A + EY+I FQK+ K
Sbjct: 207 LPPFRAGN---EYLI-----FQKIIK 224
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYS 556
N+ LD + +++ DFGL + ++G + + GT YLAPE + VD +
Sbjct: 140 NLMLD--KDGHIKITDFGLCKEGIKDG--ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 195
Query: 557 FGMILMDLITGR 568
G+++ +++ GR
Sbjct: 196 LGVVMYEMMCGR 207
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 6/80 (7%)
Query: 503 ARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILM 562
+ +RVADFG H T + T Y PE I+ DV+S G IL
Sbjct: 208 VKNTSIRVADFGSATF-----DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILF 262
Query: 563 DLITGRKVVDATHSDPEYII 582
+ G + TH + E+++
Sbjct: 263 EYYRGFTLFQ-THENREHLV 281
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFGL R G ++T T Y APE I+ VD++S G I+ ++I G
Sbjct: 165 LKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG +++ K + GT Y++PE + D+++ G I+ L+ G
Sbjct: 146 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
Query: 568 RKVVDATHSDPEYIIHLATWFQKMHK 593
A + EY+I FQK+ K
Sbjct: 206 LPPFRAGN---EYLI-----FQKIIK 223
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 12/78 (15%)
Query: 497 NIALDVARGDDMRVADFGLV-RLVPENGKHSILTKVAGTFGYLAPEYIVTGRITA----- 550
NI LD RG +++ DFG+ RLV + K + AG Y+APE I T
Sbjct: 155 NILLD-ERGQ-IKLCDFGISGRLVDDKAK----DRSAGCAAYMAPERIDPPDPTKPDYDI 208
Query: 551 KVDVYSFGMILMDLITGR 568
+ DV+S G+ L++L TG+
Sbjct: 209 RADVWSLGISLVELATGQ 226
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/209 (18%), Positives = 81/209 (38%), Gaps = 50/209 (23%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQ---------------------GIAQ 462
LG G G V G+ + +V +K ++ GS++E G+
Sbjct: 21 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 463 FESEITVLTKGTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDD--------------- 507
+ I ++T+ L N+ E + L + DV +
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 140
Query: 508 ---------MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYS 556
++V+DFGL R V ++ + V F + PE ++ + ++K D+++
Sbjct: 141 NCLVNDQGVVKVSDFGLSRYVLDD---EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 197
Query: 557 FGMILMDLITGRKVVDATHSDPEYIIHLA 585
FG+++ ++ + K+ ++ E H+A
Sbjct: 198 FGVLMWEIYSLGKMPYERFTNSETAEHIA 226
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + + T Y APE ++ VD++S G I+ +L+
Sbjct: 163 ELKILDFGLARHTDDE-----MAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 218 TGRTLFPGT 226
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
VA +++ DFG+ R + E K ++APE + G T D++SFG++L
Sbjct: 163 VAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 222
Query: 562 MDLIT 566
++ +
Sbjct: 223 WEITS 227
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
VA +++ DFG+ R + E K ++APE + G T D++SFG++L
Sbjct: 160 VAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 219
Query: 562 MDLIT 566
++ +
Sbjct: 220 WEITS 224
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKV-DVY 555
N LD + +++ADFG + + HS GT Y+APE ++ KV DV+
Sbjct: 145 NTLLDGSPAPRLKIADFGYSK---ASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVW 201
Query: 556 SFGMILMDLITG 567
S G+ L ++ G
Sbjct: 202 SCGVTLYVMLVG 213
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
VA +++ DFG+ R + E K ++APE + G T D++SFG++L
Sbjct: 163 VAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 222
Query: 562 MDLIT 566
++ +
Sbjct: 223 WEITS 227
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + + T Y APE ++ VD++S G I+ +L+
Sbjct: 163 ELKILDFGLARHTDDE-----MAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 218 TGRTLFPGT 226
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFGL R G ++T T Y APE I+ VD++S G I+ ++I G
Sbjct: 165 LKILDFGLARTA---GTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++VADFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 181 IKVADFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + + T Y APE ++ VD++S G I+ +L+
Sbjct: 159 ELKILDFGLARHTDDE-----MAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 213
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 214 TGRTLFPGT 222
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
++VADFGL RL+ + T AG + APE + + K DV++FG++L ++
Sbjct: 169 VKVADFGLSRLMTGD----TYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEI 224
Query: 565 IT 566
T
Sbjct: 225 AT 226
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + + T Y APE ++ VD++S G I+ +L+
Sbjct: 186 ELKILDFGLARHTDDE-----MXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 240
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 241 TGRTLFPGT 249
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG +++ K + GT Y++PE + D+++ G I+ L+ G
Sbjct: 171 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG +++ K + GT Y++PE + D+++ G I+ L+ G
Sbjct: 153 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
Query: 568 RKVVDATHSDPEYIIHLATWFQKMHK 593
A + EY+I FQK+ K
Sbjct: 213 LPPFRAGN---EYLI-----FQKIIK 230
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG +++ K + GT Y++PE + D+++ G I+ L+ G
Sbjct: 171 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++VADFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IKVADFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 505 GDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILM 562
G++M ++ADFGL R + + A ++ PE I R T + DV+++G++L
Sbjct: 208 GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLW 267
Query: 563 DLIT 566
++ +
Sbjct: 268 EIFS 271
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R + + T+ Y APE ++ VD++S G I+ +L+
Sbjct: 183 ELKILDFGLARHTDDEMXGXVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 237
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 238 TGRTLFPGT 246
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++VADFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IKVADFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++VADFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IKVADFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG +++ K + GT Y++PE + D+++ G I+ L+ G
Sbjct: 168 IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
Query: 568 RKVVDATHSDPEYIIHLATWFQKMHK 593
A + EY+I FQK+ K
Sbjct: 228 LPPFRAGN---EYLI-----FQKIIK 245
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 497 NIALDVARGD-DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVY 555
N+ L+ D ++R+ DFGL + K K+ GT Y+APE ++ G K DV+
Sbjct: 156 NLLLESKSKDANIRIIDFGLSTHFEASKKXK--DKI-GTAYYIAPE-VLHGTYDEKCDVW 211
Query: 556 SFGMILMDLITG 567
S G+IL L++G
Sbjct: 212 STGVILYILLSG 223
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG + E H+ LT T Y+APE + + D++S G+I+ L+ G
Sbjct: 163 LKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 219
Query: 568 RKVVDATH 575
+ H
Sbjct: 220 YPPFYSNH 227
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG + E H+ LT T Y+APE + + D++S G+I+ L+ G
Sbjct: 165 LKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 221
Query: 568 RKVVDATH 575
+ H
Sbjct: 222 YPPFYSNH 229
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG +++ K + GT Y++PE + D+++ G I+ L+ G
Sbjct: 168 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
Query: 568 RKVVDATHSDPEYIIHLATWFQKMHK 593
A + EY+I FQK+ K
Sbjct: 228 LPPFRAGN---EYLI-----FQKIIK 245
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYS 556
NI L ++V DFG +H + + Y APE I+ R +D++S
Sbjct: 230 NILLKQQGRSGIKVIDFG-----SSCYEHQRVYXXIQSRFYRAPEVILGARYGMPIDMWS 284
Query: 557 FGMILMDLITG 567
G IL +L+TG
Sbjct: 285 LGCILAELLTG 295
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 51/202 (25%)
Query: 414 RNATNNFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMEL-------------------- 452
R + + + R+GRG G V++ + K G + VK++ L
Sbjct: 54 REEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIV 113
Query: 453 ---GSVTEQGIAQFESEITVLTKGTLG------------RHLFNWEEEGLEPLEW-NTRL 496
G+V E E+ L G+LG R L+ + + LE LE+ +TR
Sbjct: 114 PLYGAVREGPWVNIFMEL--LEGGSLGQLIKQMGCLPEDRALY-YLGQALEGLEYLHTRR 170
Query: 497 NIALDV--------ARGDDMRVADFG-LVRLVPENGKHSILTK--VAGTFGYLAPEYIVT 545
+ DV + G + DFG + L P+ S+LT + GT ++APE ++
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 230
Query: 546 GRITAKVDVYSFGMILMDLITG 567
AKVD++S +++ ++ G
Sbjct: 231 KPCDAKVDIWSSCCMMLHMLNG 252
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG + E H+ LT T Y+APE + + D++S G+I+ L+ G
Sbjct: 164 LKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 220
Query: 568 RKVVDATH 575
+ H
Sbjct: 221 YPPFYSNH 228
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG + E H+ LT T Y+APE + + D++S G+I+ L+ G
Sbjct: 203 LKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFGL GK + + GT Y+APE ++ + K DV+S G+IL L+ G
Sbjct: 146 IKIVDFGLSAHFEVGGK---MKERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L AGT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IQVTDFGFAKRV--KGRTWXL---AGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG + E H+ LT T Y+APE + + D++S G+I+ L+ G
Sbjct: 157 LKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 21/127 (16%)
Query: 93 CSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLR----GPIPSLVGSLEFFS 148
CS G + R +VP + ++ ++YL +NQ+ G SL+ E +
Sbjct: 17 CSCSGTTVDCR---SKRHASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELY- 70
Query: 149 AYEANISGTIPDFIGT-DTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLG 207
+N G +P +G D+ QL+ LDLG N L +P A L L++L +
Sbjct: 71 -LGSNQLGALP--VGVFDSLTQLTVLDLGTNQLT-------VLPSAVFDRLVHLKELFMC 120
Query: 208 HNKLTGI 214
NKLT +
Sbjct: 121 CNKLTEL 127
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYS 556
N+ LD + ++++ DFGL R++ N S GT Y++PE + K D++S
Sbjct: 146 NVFLDGKQ--NVKLGDFGLARIL--NHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 557 FGMILMDL 564
G +L +L
Sbjct: 202 LGCLLYEL 209
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG + E H+ LT T Y+APE + + D++S G+I+ L+ G
Sbjct: 158 LKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 214
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 49/201 (24%)
Query: 414 RNATNNFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMEL-------------------- 452
R + + + R+GRG G V++ + K G + VK++ L
Sbjct: 70 REEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIV 129
Query: 453 ---GSVTEQGIAQFESEITVLTKGTLGRHL-----------FNWEEEGLEPLEW-NTRLN 497
G+V E E+ L G+LG+ + + + LE LE+ +TR
Sbjct: 130 PLYGAVREGPWVNIFMEL--LEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRI 187
Query: 498 IALDV--------ARGDDMRVADFG-LVRLVPENGKHSILTK--VAGTFGYLAPEYIVTG 546
+ DV + G + DFG + L P+ S+LT + GT ++APE ++
Sbjct: 188 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 247
Query: 547 RITAKVDVYSFGMILMDLITG 567
AKVD++S +++ ++ G
Sbjct: 248 PCDAKVDIWSSCCMMLHMLNG 268
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 503 ARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILM 562
+RG+ +++ DFG+ + + S+ GT Y+APE + + + D++S G+ L+
Sbjct: 150 SRGE-IKLCDFGVSGQLID----SMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLV 204
Query: 563 DLITGR 568
+L GR
Sbjct: 205 ELAVGR 210
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYS 556
N+ LD + ++++ DFGL R++ N S GT Y++PE + K D++S
Sbjct: 146 NVFLDGKQ--NVKLGDFGLARIL--NHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 557 FGMILMDL 564
G +L +L
Sbjct: 202 LGCLLYEL 209
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG + E H+ LT T Y+APE + + D++S G+I+ L+ G
Sbjct: 159 LKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG + E H+ LT T Y+APE + + D++S G+I+ L+ G
Sbjct: 173 LKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 229
Query: 568 RKVVDATH 575
+ H
Sbjct: 230 YPPFYSNH 237
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG + E H+ LT T Y+APE + + D++S G+I+ L+ G
Sbjct: 209 LKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 265
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG + E H+ LT T Y+APE + + D++S G+I+ L+ G
Sbjct: 159 LKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFGL + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IKVTDFGLAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 503 ARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILM 562
+R +++ DFGL GK + + GT Y+APE ++ + K DV+S G+IL
Sbjct: 158 SRDALIKIVDFGLSAHFEVGGK---MKERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILY 213
Query: 563 DLITG 567
L+ G
Sbjct: 214 ILLCG 218
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYS 556
N+ LD + ++++ DFGL R++ N + GT Y++PE + K D++S
Sbjct: 146 NVFLDGKQ--NVKLGDFGLARIL--NHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 557 FGMILMDL 564
G +L +L
Sbjct: 202 LGCLLYEL 209
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 9/70 (12%)
Query: 510 VADFGL-VRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT------AKVDVYSFGMILM 562
+ADFGL VR P +V GT Y+APE ++ G I ++D+Y+ G++L
Sbjct: 164 LADFGLAVRFEPGKPPGDTHGQV-GTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLW 221
Query: 563 DLITGRKVVD 572
+L++ K D
Sbjct: 222 ELVSRCKAAD 231
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFGL R + ++ + ++APE I T + DV+SFG++L ++ +
Sbjct: 237 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTK---VAGTFGYLAPEYIVTGRITAKVD 553
NI +D + +++ DFG+ + + E LT+ V GT Y +PE D
Sbjct: 141 NILIDSNKT--LKIFDFGIAKALSETS----LTQTNHVLGTVQYFSPEQAKGEATDECTD 194
Query: 554 VYSFGMILMDLITGR 568
+YS G++L +++ G
Sbjct: 195 IYSIGIVLYEMLVGE 209
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFGL R + ++ + ++APE I T + DV+SFG++L ++ +
Sbjct: 189 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFGL R + ++ + ++APE I T + DV+SFG++L ++ +
Sbjct: 239 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 39/96 (40%), Gaps = 26/96 (27%)
Query: 508 MRVADFGLVRLV--PENGKHSI-----------------------LTKVAGTFGYLAPEY 542
++V DFGL R V PENG + LT T Y APE
Sbjct: 195 VKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPEL 254
Query: 543 IVTGR-ITAKVDVYSFGMILMDLITGRKVVDATHSD 577
I+ T +DV+S G I +L+ K A H+D
Sbjct: 255 ILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHAD 290
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYS 556
NI LD +++ DFGL + ++ K + GT Y+APE + + D +S
Sbjct: 160 NILLD--EEGHIKLTDFGLSKEAIDHEKKAY--SFCGTVEYMAPEVVNRQGHSHSADWWS 215
Query: 557 FGMILMDLITG 567
+G+++ +++TG
Sbjct: 216 YGVLMFEMLTG 226
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFGL R + ++ + ++APE I T + DV+SFG++L ++ +
Sbjct: 187 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 90/218 (41%), Gaps = 25/218 (11%)
Query: 357 IGDFCGLFVVGLGVF---LYIRNKKSSETVPIQVLRPR--ICGISVVHSVDFGDMAIPIQ 411
+ DF L ++G G F + +R K + +++LR I V H+V +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV------TESR 57
Query: 412 VLRNATNNFSEENRLG-RGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVL 470
VL+N + F + + + E +G E+ TE+ + +EI
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA 117
Query: 471 TKGTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDDMRVADFGLVRLVPENGKHSILTK 530
+ R + + + LE N+ LD + +++ DFGL + +G + +
Sbjct: 118 LEYLHSRDVV-YRDIKLE--------NLMLD--KDGHIKITDFGLCKEGISDG--ATMKX 164
Query: 531 VAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGR 568
GT YLAPE + VD + G+++ +++ GR
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 90/218 (41%), Gaps = 25/218 (11%)
Query: 357 IGDFCGLFVVGLGVF---LYIRNKKSSETVPIQVLRPR--ICGISVVHSVDFGDMAIPIQ 411
+ DF L ++G G F + +R K + +++LR I V H+V +
Sbjct: 9 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV------TESR 62
Query: 412 VLRNATNNFSEENRLG-RGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVL 470
VL+N + F + + + E +G E+ TE+ + +EI
Sbjct: 63 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA 122
Query: 471 TKGTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDDMRVADFGLVRLVPENGKHSILTK 530
+ R + + + LE N+ LD + +++ DFGL + +G + +
Sbjct: 123 LEYLHSRDVV-YRDIKLE--------NLMLD--KDGHIKITDFGLCKEGISDG--ATMKX 169
Query: 531 VAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGR 568
GT YLAPE + VD + G+++ +++ GR
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 90/218 (41%), Gaps = 25/218 (11%)
Query: 357 IGDFCGLFVVGLGVF---LYIRNKKSSETVPIQVLRPR--ICGISVVHSVDFGDMAIPIQ 411
+ DF L ++G G F + +R K + +++LR I V H+V +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV------TESR 57
Query: 412 VLRNATNNFSEENRLG-RGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVL 470
VL+N + F + + + E +G E+ TE+ + +EI
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA 117
Query: 471 TKGTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDDMRVADFGLVRLVPENGKHSILTK 530
+ R + + + LE N+ LD + +++ DFGL + +G + +
Sbjct: 118 LEYLHSRDVV-YRDIKLE--------NLMLD--KDGHIKITDFGLCKEGISDG--ATMKX 164
Query: 531 VAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGR 568
GT YLAPE + VD + G+++ +++ GR
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFGL R G ++ T Y APE I+ VD++S G I+ ++I G
Sbjct: 167 LKILDFGLARTA---GTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFGL R + ++ + ++APE I T + DV+SFG++L ++ +
Sbjct: 178 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVY 555
NI LD +R++D GL + H+ + GT GY+APE + G + D +
Sbjct: 321 NILLD--EHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVLQKGVAYDSSADWF 374
Query: 556 SFGMILMDLITG 567
S G +L L+ G
Sbjct: 375 SLGCMLFKLLRG 386
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVY 555
NI LD +R++D GL + H+ + GT GY+APE + G + D +
Sbjct: 322 NILLD--EHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVLQKGVAYDSSADWF 375
Query: 556 SFGMILMDLITG 567
S G +L L+ G
Sbjct: 376 SLGCMLFKLLRG 387
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVY 555
NI LD +R++D GL + H+ GT GY+APE + G + D +
Sbjct: 322 NILLD--EHGHVRISDLGLACDFSKKKPHA----SVGTHGYMAPEVLQKGVAYDSSADWF 375
Query: 556 SFGMILMDLITG 567
S G +L L+ G
Sbjct: 376 SLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVY 555
NI LD +R++D GL + H+ GT GY+APE + G + D +
Sbjct: 322 NILLD--EHGHVRISDLGLACDFSKKKPHA----SVGTHGYMAPEVLQKGVAYDSSADWF 375
Query: 556 SFGMILMDLITG 567
S G +L L+ G
Sbjct: 376 SLGCMLFKLLRG 387
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFGL R + ++ + ++APE I T + DV+SFG++L ++ +
Sbjct: 232 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFGL R + ++ + ++APE I T + DV+SFG++L ++ +
Sbjct: 230 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFGL R + ++ + ++APE I T + DV+SFG++L ++ +
Sbjct: 178 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
D++V DFG E+ HS L T Y APE I+ + DV+S G IL++
Sbjct: 175 DIKVVDFGSATYDDEH--HSTL---VSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYL 229
Query: 567 GRKVVDATHSDPEYI 581
G V TH E++
Sbjct: 230 GFTVF-PTHDSKEHL 243
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFGL R + ++ + ++APE I T + DV+SFG++L ++ +
Sbjct: 183 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFGL + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IQVTDFGLAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 90/218 (41%), Gaps = 25/218 (11%)
Query: 357 IGDFCGLFVVGLGVF---LYIRNKKSSETVPIQVLRPR--ICGISVVHSVDFGDMAIPIQ 411
+ DF L ++G G F + +R K + +++LR I V H+V +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV------TESR 57
Query: 412 VLRNATNNFSEENRLG-RGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVL 470
VL+N + F + + + E +G E+ TE+ + +EI
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA 117
Query: 471 TKGTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDDMRVADFGLVRLVPENGKHSILTK 530
+ R + + + LE N+ LD + +++ DFGL + +G + +
Sbjct: 118 LEYLHSRDVV-YRDIKLE--------NLMLD--KDGHIKITDFGLCKEGISDG--ATMKT 164
Query: 531 VAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGR 568
GT YLAPE + VD + G+++ +++ GR
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 90/218 (41%), Gaps = 25/218 (11%)
Query: 357 IGDFCGLFVVGLGVF---LYIRNKKSSETVPIQVLRPR--ICGISVVHSVDFGDMAIPIQ 411
+ DF L ++G G F + +R K + +++LR I V H+V +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV------TESR 57
Query: 412 VLRNATNNFSEENRLG-RGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVL 470
VL+N + F + + + E +G E+ TE+ + +EI
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA 117
Query: 471 TKGTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDDMRVADFGLVRLVPENGKHSILTK 530
+ R + + + LE N+ LD + +++ DFGL + +G + +
Sbjct: 118 LEYLHSRDVV-YRDIKLE--------NLMLD--KDGHIKITDFGLCKEGISDG--ATMKX 164
Query: 531 VAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGR 568
GT YLAPE + VD + G+++ +++ GR
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 90/218 (41%), Gaps = 25/218 (11%)
Query: 357 IGDFCGLFVVGLGVF---LYIRNKKSSETVPIQVLRPR--ICGISVVHSVDFGDMAIPIQ 411
+ DF L ++G G F + +R K + +++LR I V H+V +
Sbjct: 7 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV------TESR 60
Query: 412 VLRNATNNFSEENRLG-RGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVL 470
VL+N + F + + + E +G E+ TE+ + +EI
Sbjct: 61 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA 120
Query: 471 TKGTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDDMRVADFGLVRLVPENGKHSILTK 530
+ R + + + LE N+ LD + +++ DFGL + +G + +
Sbjct: 121 LEYLHSRDVV-YRDIKLE--------NLMLD--KDGHIKITDFGLCKEGISDG--ATMKT 167
Query: 531 VAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGR 568
GT YLAPE + VD + G+++ +++ GR
Sbjct: 168 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFGL R + ++ + ++APE I T + DV+SFG++L ++ +
Sbjct: 224 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKV-DVY 555
N LD + +++ DFG + + HS GT Y+APE ++ KV DV+
Sbjct: 145 NTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVW 201
Query: 556 SFGMILMDLITG 567
S G+ L ++ G
Sbjct: 202 SCGVTLYVMLVG 213
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R ++T+ Y APE I++ VD++S G I+ +++
Sbjct: 164 ELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSWMHYNQTVDIWSVGCIMAEML 218
Query: 566 TGR 568
TG+
Sbjct: 219 TGK 221
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 91/225 (40%), Gaps = 39/225 (17%)
Query: 357 IGDFCGLFVVGLGVF---LYIRNKKSSETVPIQVLRPR--ICGISVVHSVDFGDMAIPIQ 411
+ DF L ++G G F + +R K + +++LR I V H+V +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV------TESR 57
Query: 412 VLRNATN--------NFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQF 463
VL+N + F +RL + E +G E+ TE+ +
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRL-------CFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 464 ESEITVLTKGTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDDMRVADFGLVRLVPENG 523
+EI + R + + + LE N+ LD + +++ DFGL + +G
Sbjct: 111 GAEIVSALEYLHSRDVV-YRDIKLE--------NLMLD--KDGHIKITDFGLCKEGISDG 159
Query: 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGR 568
+ + GT YLAPE + VD + G+++ +++ GR
Sbjct: 160 --ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKV-DVY 555
N LD + +++ DFG + + HS GT Y+APE ++ KV DV+
Sbjct: 144 NTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVW 200
Query: 556 SFGMILMDLITG 567
S G+ L ++ G
Sbjct: 201 SCGVTLYVMLVG 212
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DF L R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 163 ELKILDFYLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 218 TGRTLFPGT 226
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ FGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 163 ELKILGFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 218 TGRTLFPGT 226
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ DFGL R ++T+ Y APE I++ VD++S G I+ +++
Sbjct: 182 ELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSWMHYNQTVDIWSVGCIMAEML 236
Query: 566 TGR 568
TG+
Sbjct: 237 TGK 239
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 500 LDVARGDDMRVADFGLVRL--VP-ENGKHSILTKVAGTFGYLAPEYIV-TGRITAKVDVY 555
L + R ++++ADFGL R +P H I+ T Y AP+ ++ + + + +D++
Sbjct: 131 LLINREGELKIADFGLARAFGIPVRKYTHEIV-----TLWYRAPDVLMGSKKYSTTIDIW 185
Query: 556 SFGMILMDLITG 567
S G I +++ G
Sbjct: 186 SVGCIFAEMVNG 197
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGR 568
++ADFG+ + NG + GT Y+APE + VD ++ G++L +++ G
Sbjct: 164 KLADFGMCKEGICNGVTT--ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGH 221
Query: 569 KVVDATHSD 577
+A + D
Sbjct: 222 APFEAENED 230
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFGL R + ++ + ++APE I T + DV+SFG++L ++ +
Sbjct: 183 VKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFG+ R V + + ++ PE I+ + T + DV+S G++L ++ T
Sbjct: 167 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFGL R + ++ ++APE I T + DV+SFG++L ++ +
Sbjct: 187 VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V+ D + DFG+ + K + L GT Y APE T + D+Y+ +L
Sbjct: 167 VSADDFAYLVDFGIASATTDE-KLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVL 225
Query: 562 MDLITG 567
+ +TG
Sbjct: 226 YECLTG 231
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT- 566
+++ DFGL R G ++T T Y APE I+ VD++S G I+ +++
Sbjct: 203 LKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 259
Query: 567 -----GRKVVD 572
GR +D
Sbjct: 260 KILFPGRDYID 270
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 39/210 (18%), Positives = 81/210 (38%), Gaps = 52/210 (24%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQ---------------------GIAQ 462
LG G G V G+ + +V +K ++ GS++E G+
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 463 FESEITVLTKGTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDD--------------- 507
+ I ++T+ L N+ E + L + DV +
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 134
Query: 508 ---------MRVADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTGRITAKVDVY 555
++V+DFGL R V ++ T G+ + PE ++ + ++K D++
Sbjct: 135 NCLVNDQGVVKVSDFGLSRYVLDDE----YTSSRGSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 556 SFGMILMDLITGRKVVDATHSDPEYIIHLA 585
+FG+++ ++ + K+ ++ E H+A
Sbjct: 191 AFGVLMWEIYSLGKMPYERFTNSETAEHIA 220
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKV-DVY 555
N LD + +++ DFG + + HS GT Y+APE ++ K+ DV+
Sbjct: 146 NTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVW 202
Query: 556 SFGMILMDLITG 567
S G+ L ++ G
Sbjct: 203 SCGVTLYVMLVG 214
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFGL R + ++ ++APE I T + DV+SFG++L ++ +
Sbjct: 187 VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG+ R++ N + GT YL+PE K D+++ G +L +L T
Sbjct: 164 VQLGDFGIARVL--NSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTL 221
Query: 568 RKVVDA 573
+ +A
Sbjct: 222 KHAFEA 227
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ D GL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 163 ELKILDAGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 218 TGRTLFPGT 226
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 505 GDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
G ++ DFG+ R + + ++ PE + G T+K D +SFG++L ++
Sbjct: 171 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 230
Query: 565 IT 566
+
Sbjct: 231 FS 232
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 508 MRVADFGLVRLVPENGKHSILT--KVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
+++ DFGL + + + + + + + F Y APE ++ + DV+SFG+ L +L+
Sbjct: 165 VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELL 223
Query: 566 T 566
T
Sbjct: 224 T 224
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFGL R + ++ ++APE I T + DV+SFG++L ++ +
Sbjct: 187 VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPE--NGKHSILTKVAGTFGYLAPEYIVTGRITA--KV 552
N + ++++ DFGL + + NG++ +T AGT ++APE + T + K
Sbjct: 198 NFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257
Query: 553 DVYSFGMILMDLITG 567
D +S G++L L+ G
Sbjct: 258 DAWSAGVLLHLLLMG 272
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFGL R + ++ ++APE I T + DV+SFG++L ++ +
Sbjct: 178 VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFGL R + ++ ++APE I T + DV+SFG++L ++ +
Sbjct: 178 VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 505 GDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
G ++ DFG+ R + + ++ PE + G T+K D +SFG++L ++
Sbjct: 179 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
Query: 565 IT 566
+
Sbjct: 239 FS 240
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 505 GDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
G ++ DFG+ R + + ++ PE + G T+K D +SFG++L ++
Sbjct: 180 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
Query: 565 IT 566
+
Sbjct: 240 FS 241
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 505 GDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
G ++ DFG+ R + + ++ PE + G T+K D +SFG++L ++
Sbjct: 179 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
Query: 565 IT 566
+
Sbjct: 239 FS 240
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 505 GDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
G ++ DFG+ R + + ++ PE + G T+K D +SFG++L ++
Sbjct: 194 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
Query: 565 IT 566
+
Sbjct: 254 FS 255
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 505 GDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
G ++ DFG+ R + + ++ PE + G T+K D +SFG++L ++
Sbjct: 206 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 265
Query: 565 IT 566
+
Sbjct: 266 FS 267
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 508 MRVADFGLVRLVPENGKHSILT--KVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
+++ DFGL + + + + + + + F Y APE ++ + DV+SFG+ L +L+
Sbjct: 153 VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELL 211
Query: 566 T 566
T
Sbjct: 212 T 212
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IKVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 505 GDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
G ++ DFG+ R + + ++ PE + G T+K D +SFG++L ++
Sbjct: 194 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
Query: 565 IT 566
+
Sbjct: 254 FS 255
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 505 GDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
G ++ DFG+ R + + ++ PE + G T+K D +SFG++L ++
Sbjct: 196 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 255
Query: 565 IT 566
+
Sbjct: 256 FS 257
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT- 566
+++ DFGL R G ++T T Y APE I+ VD++S G I+ +++
Sbjct: 203 LKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 259
Query: 567 -----GRKVVD 572
GR +D
Sbjct: 260 KILFPGRDYID 270
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IKVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 505 GDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
G ++ DFG+ R + + ++ PE + G T+K D +SFG++L ++
Sbjct: 180 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
Query: 565 IT 566
+
Sbjct: 240 FS 241
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V + +++ DFGL RL+ + K ++A E I + T + DV+S+G+ +
Sbjct: 150 VKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTI 209
Query: 562 MDLIT 566
+L+T
Sbjct: 210 WELMT 214
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT- 566
+++ DFGL R G ++T T Y APE I+ VD++S G I+ +++
Sbjct: 166 LKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 222
Query: 567 -----GRKVVD 572
GR +D
Sbjct: 223 KILFPGRDYID 233
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 181 IKVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT- 566
+++ DFGL R G ++T T Y APE I+ VD++S G I+ +++
Sbjct: 165 LKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 567 -----GRKVVD 572
GR +D
Sbjct: 222 KILFPGRDYID 232
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 505 GDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
G ++ DFG+ R + + ++ PE + G T+K D +SFG++L ++
Sbjct: 194 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
Query: 565 IT 566
+
Sbjct: 254 FS 255
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 181 IKVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 181 IKVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 181 IKVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 505 GDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
G ++ DFG+ R + + ++ PE + G T+K D +SFG++L ++
Sbjct: 186 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 245
Query: 565 IT 566
+
Sbjct: 246 FS 247
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+V+DFGL R++ E+ + T G + APE I ++ DV+SFG+++ +++
Sbjct: 191 KVSDFGLSRVL-EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKH-SILTKVAGTFGYLAPEYIVTGRITAKVDVY 555
NI LD ++G + + DFGL + EN +H S + GT YLAPE + VD +
Sbjct: 169 NILLD-SQGH-IVLTDFGLCK---ENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWW 223
Query: 556 SFGMILMDLITG 567
G +L +++ G
Sbjct: 224 CLGAVLYEMLYG 235
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT- 566
+++ DFGL R G ++T T Y APE I+ VD++S G I+ +++
Sbjct: 164 LKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 220
Query: 567 -----GRKVVD 572
GR +D
Sbjct: 221 KILFPGRDYID 231
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT- 566
+++ DFGL R G ++T T Y APE I+ VD++S G I+ +++
Sbjct: 165 LKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 567 -----GRKVVD 572
GR +D
Sbjct: 222 KILFPGRDYID 232
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ D GL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 163 ELKILDRGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 218 TGRTLFPGT 226
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFG + E H+ LT T Y+APE + + D +S G+I L+ G
Sbjct: 203 LKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCG 259
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT- 566
+++ DFGL R G ++T T Y APE I+ VD++S G I+ +++
Sbjct: 159 LKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 215
Query: 567 -----GRKVVD 572
GR +D
Sbjct: 216 KILFPGRDYID 226
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 500 LDVARGDDMRVADFGLVRL--VP-ENGKHSILTKVAGTFGYLAPEYIV-TGRITAKVDVY 555
L + R ++++ADFGL R +P H ++ T Y AP+ ++ + + + +D++
Sbjct: 131 LLINREGELKIADFGLARAFGIPVRKYTHEVV-----TLWYRAPDVLMGSKKYSTTIDIW 185
Query: 556 SFGMILMDLITG 567
S G I +++ G
Sbjct: 186 SVGCIFAEMVNG 197
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 503 ARGDDMRVADFGLV-RLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
+RG+ +++ DFG+ +L+ S+ GT Y++PE + + + D++S G+ L
Sbjct: 202 SRGE-IKLCDFGVSGQLI-----DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 255
Query: 562 MDLITGR 568
+++ GR
Sbjct: 256 VEMAVGR 262
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT- 566
+++ DFGL R G ++T T Y APE I+ VD++S G I+ +++
Sbjct: 158 LKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 214
Query: 567 -----GRKVVD 572
GR +D
Sbjct: 215 KILFPGRDYID 225
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT- 566
+++ DFGL R G ++T T Y APE I+ VD++S G I+ +++
Sbjct: 159 LKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 215
Query: 567 -----GRKVVD 572
GR +D
Sbjct: 216 KILFPGRDYID 226
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT- 566
+++ DFGL R G ++T T Y APE I+ VD++S G I+ +++
Sbjct: 166 LKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 222
Query: 567 -----GRKVVD 572
GR +D
Sbjct: 223 KILFPGRDYID 233
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 500 LDVARGDDMRVADFGLVRL--VP-ENGKHSILTKVAGTFGYLAPEYIV-TGRITAKVDVY 555
L + R ++++ADFGL R +P H ++ T Y AP+ ++ + + + +D++
Sbjct: 131 LLINREGELKIADFGLARAFGIPVRKYTHEVV-----TLWYRAPDVLMGSKKYSTTIDIW 185
Query: 556 SFGMILMDLITG 567
S G I +++ G
Sbjct: 186 SVGCIFAEMVNG 197
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 15/79 (18%)
Query: 497 NIALDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGR------I 548
NI LD D+M R++DFG + K L ++ GT GYLAPE +
Sbjct: 230 NILLD----DNMQIRLSDFGFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGY 282
Query: 549 TAKVDVYSFGMILMDLITG 567
+VD+++ G+IL L+ G
Sbjct: 283 GKEVDLWACGVILFTLLAG 301
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFGL R + ++ ++APE I T + DV+SFG++L ++ +
Sbjct: 187 VKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
V + +++ DFGL RL+ + K ++A E I + T + DV+S+G+ +
Sbjct: 173 VKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTI 232
Query: 562 MDLIT 566
+L+T
Sbjct: 233 WELMT 237
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT- 566
+++ DFGL R G ++T T Y APE I+ VD++S G I+ +++
Sbjct: 165 LKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 567 -----GRKVVD 572
GR +D
Sbjct: 222 KILFPGRDYID 232
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+V+DFGL R++ E+ + T G + APE I ++ DV+SFG+++ +++
Sbjct: 191 KVSDFGLSRVL-EDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 531 VAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK 590
+ T Y APE I+ D++SFG +L +L TG ++ TH E++ + + Q
Sbjct: 219 IINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG-SLLFRTHEHMEHLAMMESIIQP 277
Query: 591 MHKN--HDTFQMAIDKTIQLDEENLA 614
+ KN ++ + K + DE LA
Sbjct: 278 IPKNMLYEATKTNGSKYVNKDELKLA 303
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 510 VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRI-TAKVDVYSFGMILMDLITGR 568
+ADFG P + ++ GT YL PE ++ GR+ KVD++ G++ +L+ G
Sbjct: 164 IADFGWSVHAPSLRRKTM----CGTLDYLPPE-MIEGRMHNEKVDLWCIGVLCYELLVGN 218
Query: 569 KVVDATHSDPEY 580
++ + Y
Sbjct: 219 PPFESASHNETY 230
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT- 566
+++ DFGL R G ++T T Y APE I+ VD++S G I+ +++
Sbjct: 165 LKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 567 -----GRKVVD 572
GR +D
Sbjct: 222 KILFPGRDYID 232
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 503 ARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILM 562
+RG+ +++ DFG+ + + S+ GT Y++PE + + + D++S G+ L+
Sbjct: 167 SRGE-IKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 221
Query: 563 DLITGR 568
++ GR
Sbjct: 222 EMAVGR 227
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 181 IQVTDFGFAKRV--KGRTWTL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Query: 503 ARGDDMRVADFGLV-RLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
+RG+ +++ DFG+ +L+ E + + GT Y++PE + + + D++S G+ L
Sbjct: 143 SRGE-IKLCDFGVSGQLIDE-----MANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 196
Query: 562 MDLITGR 568
+++ GR
Sbjct: 197 VEMAVGR 203
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V K + T + GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 201 IQVTDFGFAKRV----KGATWT-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT- 566
+++ DFGL R G ++T T Y APE I+ VD++S G I+ +++
Sbjct: 170 LKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCH 226
Query: 567 -----GRKVVD 572
GR +D
Sbjct: 227 KILFPGRDYID 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT- 566
+++ DFGL R G ++T T Y APE I+ VD++S G I+ +++
Sbjct: 158 LKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 214
Query: 567 -----GRKVVD 572
GR +D
Sbjct: 215 KILFPGRDYID 225
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IQVTDFGFAKRV--KGRTWXLX---GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 507 DMRVADFGLV-RLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
D+++ADFG+ +L K + GT ++APE I +K D++S G+ ++L
Sbjct: 158 DVKLADFGVAGQLTDTQIKRNTFV---GTPFWMAPEVIQQSAYDSKADIWSLGITAIELA 214
Query: 566 TG 567
G
Sbjct: 215 KG 216
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 181 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT- 566
+++ DFGL R G ++T T Y APE I+ VD++S G I+ +++
Sbjct: 165 LKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 567 -----GRKVVD 572
GR +D
Sbjct: 222 KILFPGRDYID 232
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT- 566
+++ DFGL R G ++T T Y APE I+ VD++S G I+ +++
Sbjct: 159 LKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCH 215
Query: 567 -----GRKVVD 572
GR +D
Sbjct: 216 KILFPGRDYID 226
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 508 MRVADFGLVR-LVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+R+ DFG + L ENG +L T ++APE + D++S G++L ++
Sbjct: 164 LRICDFGFAKQLRAENG---LLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLA 220
Query: 567 G 567
G
Sbjct: 221 G 221
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLI 565
++++ D GL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 163 ELKILDGGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 566 TGRKVVDAT 574
TGR + T
Sbjct: 218 TGRTLFPGT 226
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 181 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT- 566
+++ DFGL R G ++T T Y APE I+ VD++S G I+ +++
Sbjct: 165 LKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 567 -----GRKVVD 572
GR +D
Sbjct: 222 KILFPGRDYID 232
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 173 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 175 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 181 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 181 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 201 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 173 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 181 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 166 IQVTDFGFAKRV--KGRTWTL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 181 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 508 MRVADFGLVR-LVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+R+ DFG + L ENG +L T ++APE + D++S G++L ++
Sbjct: 164 LRICDFGFAKQLRAENG---LLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLA 220
Query: 567 G 567
G
Sbjct: 221 G 221
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 167 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
++++ADFG P + + GT YL PE I KVD++ G++ + +
Sbjct: 153 ELKIADFGWSVHAPSLRRRXM----CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLV 208
Query: 567 GRKVVDA-THSD 577
G D+ +H++
Sbjct: 209 GMPPFDSPSHTE 220
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 180 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ ++ G
Sbjct: 201 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 503 ARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILM 562
+RG+ +++ DFG+ + + S+ GT Y++PE + + + D++S G+ L+
Sbjct: 140 SRGE-IKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 194
Query: 563 DLITGR 568
++ GR
Sbjct: 195 EMAVGR 200
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 503 ARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILM 562
+RG+ +++ DFG+ + + S+ GT Y++PE + + + D++S G+ L+
Sbjct: 140 SRGE-IKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 194
Query: 563 DLITGR 568
++ GR
Sbjct: 195 EMAVGR 200
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 503 ARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILM 562
+RG+ +++ DFG+ + + S+ GT Y++PE + + + D++S G+ L+
Sbjct: 140 SRGE-IKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 194
Query: 563 DLITGR 568
++ GR
Sbjct: 195 EMAVGR 200
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
++++ADFG P + + GT YL PE I KVD++ G++ + +
Sbjct: 152 ELKIADFGWSVHAPSLRRRXM----CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLV 207
Query: 567 GRKVVDA-THSD 577
G D+ +H++
Sbjct: 208 GMPPFDSPSHTE 219
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 503 ARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILM 562
+RG+ +++ DFG+ + + S+ GT Y++PE + + + D++S G+ L+
Sbjct: 159 SRGE-IKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 213
Query: 563 DLITGR 568
++ GR
Sbjct: 214 EMAVGR 219
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
++++ADFG P + + GT YL PE I KVD++ G++ + +
Sbjct: 152 ELKIADFGWSVHAPSLRRRXM----CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLV 207
Query: 567 GRKVVDA-THSD 577
G D+ +H++
Sbjct: 208 GMPPFDSPSHTE 219
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 503 ARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILM 562
+RG+ +++ DFG+ + + S+ GT Y++PE + + + D++S G+ L+
Sbjct: 140 SRGE-IKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 194
Query: 563 DLITGR 568
++ GR
Sbjct: 195 EMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 503 ARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILM 562
+RG+ +++ DFG+ + + S+ GT Y++PE + + + D++S G+ L+
Sbjct: 140 SRGE-IKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 194
Query: 563 DLITGR 568
++ GR
Sbjct: 195 EMAVGR 200
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITA-KVDVY 555
N+ LD ++++ADFG GK L G+ Y APE + +VDV+
Sbjct: 141 NLLLDADM--NIKIADFGFSNEFTVGGK---LDTFCGSPPYAAPELFQGKKYDGPEVDVW 195
Query: 556 SFGMILMDLITG 567
S G+IL L++G
Sbjct: 196 SLGVILYTLVSG 207
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
D++V DFG E+ HS L Y APE I+ + DV+S G IL++
Sbjct: 175 DIKVVDFGSATYDDEH--HSTLVXXRH---YRAPEVILALGWSQPCDVWSIGCILIEYYL 229
Query: 567 GRKVVDATHSDPEYI 581
G V TH E++
Sbjct: 230 GFTVF-PTHDSKEHL 243
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++V DFG + V G+ L GT YLAPE I++ VD ++ G+++ + G
Sbjct: 180 IQVTDFGFAKRV--KGRTWXL---CGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEA 152
Q T ++L+ + K + +L+S+ +YL N+L+ +P+ V SL + +
Sbjct: 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQS-LPNGVFNKLTSLTYLN-LST 85
Query: 153 NISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLT 212
N ++P+ + D QL L L N LQ +P L+ L+DL L N+L
Sbjct: 86 NQLQSLPNGV-FDKLTQLKELALNTNQLQ-------SLPDGVFDKLTQLKDLRLYQNQLK 137
Query: 213 GI 214
+
Sbjct: 138 SV 139
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 485 EGLEPLEWNTRLNIALD-----VARGDDMRVADFGLVRLVPENGKHSILTKVAGTF--GY 537
E +E LE N ++ L V+ + +V+DFGL K + T+ G +
Sbjct: 300 EAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT-------KEASSTQDTGKLPVKW 352
Query: 538 LAPEYIVTGRITAKVDVYSFGMILMDLITGRKV 570
APE + + + K DV+SFG++L ++ + +V
Sbjct: 353 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 385
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+RV DFG H + + T Y APE I+ + DV+S G I+ + G
Sbjct: 195 VRVVDFGSATF-----DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVG 249
Query: 568 RKVVDATHSDPEYI 581
+ TH + E++
Sbjct: 250 FTLF-QTHDNREHL 262
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITA-KVDVYSFGMILMDLI 565
++++ADFG GK L G Y APE + +VDV+S G+IL L+
Sbjct: 152 NIKIADFGFSNEFTVGGK---LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 208
Query: 566 TG 567
+G
Sbjct: 209 SG 210
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 18/121 (14%)
Query: 116 ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGT-DTFPQLSYLD 174
+L KL+++ + NNQ+ P +G L E +++G IGT + L+ LD
Sbjct: 189 VLAKLTNLESLIATNNQISDITP--LGILTNLD--ELSLNGNQLKDIGTLASLTNLTDLD 244
Query: 175 LGNNNLQGTIPSS-------FGMPFADISN------LSTLEDLSLGHNKLTGIFPVSSFN 221
L NN + P S + ISN L+ L +L L N+L I P+S+
Sbjct: 245 LANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLK 304
Query: 222 N 222
N
Sbjct: 305 N 305
Score = 28.9 bits (63), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 17/115 (14%)
Query: 108 NRKGTVPPILKKLSSMAVMYLENNQLR--GPIPSLVGSLEFFSAYEANISGTIPDFIGTD 165
N+ + P L L+++ + L NQL PI +L +L + + Y NIS P
Sbjct: 270 NQISNISP-LAGLTALTNLELNENQLEDISPISNL-KNLTYLTLYFNNISDISP----VS 323
Query: 166 TFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSF 220
+ +L L NN + + ++NL+ + LS GHN+++ + P+++
Sbjct: 324 SLTKLQRLFFYNNKVSD---------VSSLANLTNINWLSAGHNQISDLTPLANL 369
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 18/121 (14%)
Query: 116 ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGT-DTFPQLSYLD 174
+L KL+++ + NNQ+ P +G L E +++G IGT + L+ LD
Sbjct: 189 VLAKLTNLESLIATNNQISDITP--LGILTNLD--ELSLNGNQLKDIGTLASLTNLTDLD 244
Query: 175 LGNNNLQGTIPSS-------FGMPFADISN------LSTLEDLSLGHNKLTGIFPVSSFN 221
L NN + P S + ISN L+ L +L L N+L I P+S+
Sbjct: 245 LANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLK 304
Query: 222 N 222
N
Sbjct: 305 N 305
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 17/115 (14%)
Query: 108 NRKGTVPPILKKLSSMAVMYLENNQLR--GPIPSLVGSLEFFSAYEANISGTIPDFIGTD 165
N+ + P L L+++ + L NQL PI +L +L + + Y NIS P
Sbjct: 270 NQISNISP-LAGLTALTNLELNENQLEDISPISNL-KNLTYLTLYFNNISDISP----VS 323
Query: 166 TFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSF 220
+ +L L NN + + ++NL+ + LS GHN+++ + P+++
Sbjct: 324 SLTKLQRLFFSNNKVSD---------VSSLANLTNINWLSAGHNQISDLTPLANL 369
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 408 IPIQVLRNATNNFSEENRLGRGGVGTVYKG-ELKDGTEVGVKRMELGSVTEQGIAQFESE 466
I + LR+ F +G G G VYKG +K G +K M++ E+ I Q E
Sbjct: 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQ---E 70
Query: 467 ITVLTKGTLGRHLFNW 482
I +L K + R++ +
Sbjct: 71 INMLKKYSHHRNIATY 86
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 18/121 (14%)
Query: 116 ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGT-DTFPQLSYLD 174
+L KL+++ + NNQ+ P +G L E +++G IGT + L+ LD
Sbjct: 190 VLAKLTNLESLIATNNQISDITP--LGILTNLD--ELSLNGNQLKDIGTLASLTNLTDLD 245
Query: 175 LGNNNLQGTIPSS-------FGMPFADISN------LSTLEDLSLGHNKLTGIFPVSSFN 221
L NN + P S + ISN L+ L +L L N+L I P+S+
Sbjct: 246 LANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLK 305
Query: 222 N 222
N
Sbjct: 306 N 306
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 17/115 (14%)
Query: 108 NRKGTVPPILKKLSSMAVMYLENNQLR--GPIPSLVGSLEFFSAYEANISGTIPDFIGTD 165
N+ + P L L+++ + L NQL PI +L +L + + Y NIS P
Sbjct: 271 NQISNISP-LAGLTALTNLELNENQLEDISPISNL-KNLTYLTLYFNNISDISP----VS 324
Query: 166 TFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSF 220
+ +L L NN + + ++NL+ + LS GHN+++ + P+++
Sbjct: 325 SLTKLQRLFFSNNKVSD---------VSSLANLTNINWLSAGHNQISDLTPLANL 370
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
++++DFG + ++ + GT ++APE I +VD++S G+++++++ G
Sbjct: 180 VKLSDFGFCAQISKDVPKR--KXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDG 237
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 15/79 (18%)
Query: 497 NIALDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGR------I 548
NI LD DDM ++ DFG + K L +V GT YLAPE I
Sbjct: 154 NILLD----DDMNIKLTDFGFSCQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGY 206
Query: 549 TAKVDVYSFGMILMDLITG 567
+VD++S G+I+ L+ G
Sbjct: 207 GKEVDMWSTGVIMYTLLAG 225
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 18/121 (14%)
Query: 116 ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGT-DTFPQLSYLD 174
+L KL+++ + NNQ+ P +G L E +++G IGT + L+ LD
Sbjct: 190 VLAKLTNLESLIATNNQISDITP--LGILTNLD--ELSLNGNQLKDIGTLASLTNLTDLD 245
Query: 175 LGNNNLQGTIPSS-------FGMPFADISN------LSTLEDLSLGHNKLTGIFPVSSFN 221
L NN + P S + ISN L+ L +L L N+L I P+S+
Sbjct: 246 LANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLK 305
Query: 222 N 222
N
Sbjct: 306 N 306
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 17/115 (14%)
Query: 108 NRKGTVPPILKKLSSMAVMYLENNQLR--GPIPSLVGSLEFFSAYEANISGTIPDFIGTD 165
N+ + P L L+++ + L NQL PI +L +L + + Y NIS P
Sbjct: 271 NQISNISP-LAGLTALTNLELNENQLEDISPISNL-KNLTYLTLYFNNISDISP----VS 324
Query: 166 TFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSF 220
+ +L L NN + + ++NL+ + LS GHN+++ + P+++
Sbjct: 325 SLTKLQRLFFYNNKVSD---------VSSLANLTNINWLSAGHNQISDLTPLANL 370
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 12/71 (16%)
Query: 502 VARGDDMRVADFGLVR------LVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVY 555
V + ++++DFG+ R G + K + APE + GR +++ DV+
Sbjct: 246 VTEKNVLKISDFGMSREEADGVYAASGGLRQVPVK------WTAPEALNYGRYSSESDVW 299
Query: 556 SFGMILMDLIT 566
SFG++L + +
Sbjct: 300 SFGILLWETFS 310
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 18/121 (14%)
Query: 116 ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGT-DTFPQLSYLD 174
+L KL+++ + NNQ+ P +G L E +++G IGT + L+ LD
Sbjct: 193 VLAKLTNLESLIATNNQISDITP--LGILTNLD--ELSLNGNQLKDIGTLASLTNLTDLD 248
Query: 175 LGNNNLQGTIPSS-------FGMPFADISN------LSTLEDLSLGHNKLTGIFPVSSFN 221
L NN + P S + ISN L+ L +L L N+L I P+S+
Sbjct: 249 LANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLK 308
Query: 222 N 222
N
Sbjct: 309 N 309
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 17/115 (14%)
Query: 108 NRKGTVPPILKKLSSMAVMYLENNQLR--GPIPSLVGSLEFFSAYEANISGTIPDFIGTD 165
N+ + P L L+++ + L NQL PI +L +L + + Y NIS P
Sbjct: 274 NQISNISP-LAGLTALTNLELNENQLEDISPISNL-KNLTYLTLYFNNISDISP----VS 327
Query: 166 TFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSF 220
+ +L L NN + + ++NL+ + LS GHN+++ + P+++
Sbjct: 328 SLTKLQRLFFANNKVSD---------VSSLANLTNINWLSAGHNQISDLTPLANL 373
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 18/121 (14%)
Query: 116 ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGT-DTFPQLSYLD 174
+L KL+++ + NNQ+ P +G L E +++G IGT + L+ LD
Sbjct: 190 VLAKLTNLESLIATNNQISDITP--LGILTNLD--ELSLNGNQLKDIGTLASLTNLTDLD 245
Query: 175 LGNNNLQGTIPSS-------FGMPFADISN------LSTLEDLSLGHNKLTGIFPVSSFN 221
L NN + P S + ISN L+ L +L L N+L I P+S+
Sbjct: 246 LANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLK 305
Query: 222 N 222
N
Sbjct: 306 N 306
Score = 28.9 bits (63), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 17/115 (14%)
Query: 108 NRKGTVPPILKKLSSMAVMYLENNQLR--GPIPSLVGSLEFFSAYEANISGTIPDFIGTD 165
N+ + P L L+++ + L NQL PI +L +L + + Y NIS P
Sbjct: 271 NQISNISP-LAGLTALTNLELNENQLEDISPISNL-KNLTYLTLYFNNISDISP----VS 324
Query: 166 TFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSF 220
+ +L L NN + + ++NL+ + LS GHN+++ + P+++
Sbjct: 325 SLTKLQRLFFYNNKVSD---------VSSLANLTNINWLSAGHNQISDLTPLANL 370
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 18/121 (14%)
Query: 116 ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGT-DTFPQLSYLD 174
+L KL+++ + NNQ+ P +G L E +++G IGT + L+ LD
Sbjct: 194 VLAKLTNLESLIATNNQISDITP--LGILTNLD--ELSLNGNQLKDIGTLASLTNLTDLD 249
Query: 175 LGNNNLQGTIPSS-------FGMPFADISN------LSTLEDLSLGHNKLTGIFPVSSFN 221
L NN + P S + ISN L+ L +L L N+L I P+S+
Sbjct: 250 LANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLK 309
Query: 222 N 222
N
Sbjct: 310 N 310
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 15/79 (18%)
Query: 497 NIALDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGR------I 548
NI LD DDM ++ DFG + K L +V GT YLAPE I
Sbjct: 141 NILLD----DDMNIKLTDFGFSCQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGY 193
Query: 549 TAKVDVYSFGMILMDLITG 567
+VD++S G+I+ L+ G
Sbjct: 194 GKEVDMWSTGVIMYTLLAG 212
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 12/71 (16%)
Query: 502 VARGDDMRVADFGLVR------LVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVY 555
V + ++++DFG+ R G + K + APE + GR +++ DV+
Sbjct: 246 VTEKNVLKISDFGMSREEADGVXAASGGLRQVPVK------WTAPEALNYGRYSSESDVW 299
Query: 556 SFGMILMDLIT 566
SFG++L + +
Sbjct: 300 SFGILLWETFS 310
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 532 AGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGR 568
AGT G+ APE + T +D++S G+I + L++GR
Sbjct: 207 AGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 485 EGLEPLEWNTRLNIALD-----VARGDDMRVADFGLVRLVPENGKHSILTKVAGTF--GY 537
E +E LE N ++ L V+ + +V+DFGL K + T+ G +
Sbjct: 128 EAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT-------KEASSTQDTGKLPVKW 180
Query: 538 LAPEYIVTGRITAKVDVYSFGMILMDLITGRKV 570
APE + + + K DV+SFG++L ++ + +V
Sbjct: 181 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 213
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 485 EGLEPLEWNTRLNIALD-----VARGDDMRVADFGLVRLVPENGKHSILTKVAGTF--GY 537
E +E LE N ++ L V+ + +V+DFGL K + T+ G +
Sbjct: 113 EAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT-------KEASSTQDTGKLPVKW 165
Query: 538 LAPEYIVTGRITAKVDVYSFGMILMDLITGRKV 570
APE + + + K DV+SFG++L ++ + +V
Sbjct: 166 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 198
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFGL R K L GT +LAPE + ++ D++S G+I L++G
Sbjct: 228 IKIIDFGLARRYKPREK---LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 507 DMRVADFGLV-RLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
D+++ADFG+ +L K + GT ++APE I K D++S G+ ++L
Sbjct: 154 DVKLADFGVAGQLTDTQIKRNXF---VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELA 210
Query: 566 TG 567
G
Sbjct: 211 KG 212
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
Query: 497 NIALDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGR------I 548
NI LD DDM ++ DFG + K L V GT YLAPE I
Sbjct: 154 NILLD----DDMNIKLTDFGFSCQLDPGEK---LRSVCGTPSYLAPEIIECSMNDNHPGY 206
Query: 549 TAKVDVYSFGMILMDLITG 567
+VD++S G+I+ L+ G
Sbjct: 207 GKEVDMWSTGVIMYTLLAG 225
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 507 DMRVADFGLV-RLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
++++ADFG+ +L K + GT ++APE I +K D++S G+ ++L
Sbjct: 157 EVKLADFGVAGQLTDTQIKRNXFV---GTPFWMAPEVIKQSAYDSKADIWSLGITAIELA 213
Query: 566 TG 567
G
Sbjct: 214 RG 215
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKV-DVY 555
N LD + +++ FG + + HS GT Y+APE ++ KV DV+
Sbjct: 145 NTLLDGSPAPRLKICAFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVW 201
Query: 556 SFGMILMDLITG 567
S G+ L ++ G
Sbjct: 202 SCGVTLYVMLVG 213
>pdb|1M9S|A Chain A, Crystal Structure Of Internalin B (Inlb), A Listeria
Monocytogenes Virulence Protein Containing Sh3-Like
Domains
Length = 605
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 12/104 (11%)
Query: 117 LKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLG 176
L L ++ ++L+ N+++ + E N I D G PQL L LG
Sbjct: 83 LTNLKNLGWLFLDENKIKDLSSLKDLKKLKSLSLEHN---GISDINGLVHLPQLESLYLG 139
Query: 177 NNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSF 220
NN + +S L+ L+ LSL N+++ I P++
Sbjct: 140 NNKI---------TDITVLSRLTKLDTLSLEDNQISDIVPLAGL 174
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 507 DMRVADFGLV-RLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
++++ADFG+ +L K + GT ++APE I +K D++S G+ ++L
Sbjct: 142 EVKLADFGVAGQLTDTQIKRNTF---VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELA 198
Query: 566 TG 567
G
Sbjct: 199 RG 200
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 497 NIALDVARGD-DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITA-KVDV 554
N+ LD GD ++++ADFG K L G+ Y APE + +VDV
Sbjct: 144 NLLLD---GDMNIKIADFGFSNEFTVGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDV 197
Query: 555 YSFGMILMDLITG 567
+S G+IL L++G
Sbjct: 198 WSLGVILYTLVSG 210
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 507 DMRVADFGLV-RLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
++++ADFG+ +L K + GT ++APE I +K D++S G+ ++L
Sbjct: 142 EVKLADFGVAGQLTDTQIKRNXFV---GTPFWMAPEVIKQSAYDSKADIWSLGITAIELA 198
Query: 566 TG 567
G
Sbjct: 199 RG 200
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK 472
+ NF + ++G G G VYK K G V +K++ L + TE + EI++L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 58
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
+ NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 59
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 9/71 (12%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT- 566
+++ DFGL R G ++ T Y APE I+ VD++S G I+ +++
Sbjct: 165 LKILDFGLARTA---GTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCH 221
Query: 567 -----GRKVVD 572
GR +D
Sbjct: 222 KILFPGRDYID 232
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
+ NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 59
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
+ NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 58
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
+ NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 56
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
+ NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 58
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
+ NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 56
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKV-DVY 555
N LD + +++ FG + + HS GT Y+APE ++ KV DV+
Sbjct: 145 NTLLDGSPAPRLKICAFGYSK---SSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVW 201
Query: 556 SFGMILMDLITG 567
S G+ L ++ G
Sbjct: 202 SCGVTLYVMLVG 213
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 485 EGLEPLEWNTRLNIALD-----VARGDDMRVADFGLVRLVPENGKHSILTKVAGTF--GY 537
E +E LE N ++ L V+ + +V+DFGL K + T+ G +
Sbjct: 119 EAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT-------KEASSTQDTGKLPVKW 171
Query: 538 LAPEYIVTGRITAKVDVYSFGMILMDLITGRKV 570
APE + + K DV+SFG++L ++ + +V
Sbjct: 172 TAPEALREAAFSTKSDVWSFGILLWEIYSFGRV 204
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
+ NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 56
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
+ NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 58
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
+ NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 58
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
+ NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 57
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
+ NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 59
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
+ NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 59
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
+ NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 60
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 507 DMRVADFGLV-RLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
++++ADFG+ +L K + GT ++APE I +K D++S G+ ++L
Sbjct: 162 EVKLADFGVAGQLTDTQIKRNTF---VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELA 218
Query: 566 TGR 568
G
Sbjct: 219 RGE 221
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
+ NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 59
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
+ NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 57
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
+ NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 57
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
+ NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 56
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
+ NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 59
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
+ NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 57
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 55
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 56
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 60
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 55
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 55
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 121 SSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTF---PQLSYLDLGN 177
+S+ + L NNQL S L++ + + ++S +G +F P L YL L
Sbjct: 222 TSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEY 281
Query: 178 NNLQGTIPSSF 188
NN+Q P SF
Sbjct: 282 NNIQRLSPRSF 292
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 55
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 56
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 57
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 55
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 56
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 56
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 63
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITA-KVDVY 555
N+ LD ++++ADFG K L + G+ Y APE + +VDV+
Sbjct: 143 NLLLDADM--NIKIADFGFSNEFTFGNK---LDEFCGSPPYAAPELFQGKKYDGPEVDVW 197
Query: 556 SFGMILMDLITG 567
S G+IL L++G
Sbjct: 198 SLGVILYTLVSG 209
>pdb|1QY6|A Chain A, Structue Of V8 Protease From Staphylococcus Aureus
pdb|2O8L|A Chain A, Structure Of V8 Protease From Staphylococcus Aureus
Length = 274
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 518 LVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMD-LITGRKVVDATHS 576
++P N +H I T G+ AP + + S ++ D L+T + VVDATH
Sbjct: 2 ILPNNDRHQITDT---TNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATHG 58
Query: 577 DPE 579
DP
Sbjct: 59 DPH 61
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL 470
NF + ++G G G VYK K G V +K++ L + TE + EI++L
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 63
>pdb|1WCZ|A Chain A, Crystal Structure Of An Alkaline Form Of V8 Protease From
Staphylococcus Aureus
Length = 268
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 518 LVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMD-LITGRKVVDATHS 576
++P N +H I T G+ AP + + S ++ D L+T + VVDATH
Sbjct: 2 ILPNNDRHQITDT---TNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATHG 58
Query: 577 DPE 579
DP
Sbjct: 59 DPH 61
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 42/106 (39%), Gaps = 34/106 (32%)
Query: 117 LKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLG 176
L LS++ V+YL+ NQ+ I L G L YL +G
Sbjct: 131 LAGLSNLQVLYLDLNQITN-ISPLAG------------------------LTNLQYLSIG 165
Query: 177 NNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNN 222
NN + P ++NLS L L NK++ I P++S N
Sbjct: 166 NNQVNDLTP---------LANLSKLTTLRADDNKISDISPLASLPN 202
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITA-KVDVY 555
N+ LD ++++ADFG K L G Y APE + +VDV+
Sbjct: 143 NLLLDA--DXNIKIADFGFSNEFTFGNK---LDAFCGAPPYAAPELFQGKKYDGPEVDVW 197
Query: 556 SFGMILMDLITG 567
S G+IL L++G
Sbjct: 198 SLGVILYTLVSG 209
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 19/105 (18%)
Query: 118 KKLSSMAVMYLENNQLRGPIPSL-------VGSLEFFSAYEANISGTIPDFIGTDTFPQL 170
+ LS ++ + L N PI SL + SL+ A E N++ + FP
Sbjct: 75 QSLSHLSTLILTGN----PIQSLALGAFSGLSSLQKLVAVETNLASL-------ENFPIG 123
Query: 171 SYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIF 215
L N+ + SF +P SNL+ LE L L NK+ I+
Sbjct: 124 HLKTLKELNVAHNLIQSFKLP-EYFSNLTNLEHLDLSSNKIQSIY 167
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 19/105 (18%)
Query: 118 KKLSSMAVMYLENNQLRGPIPSL-------VGSLEFFSAYEANISGTIPDFIGTDTFPQL 170
+ LS ++ + L N PI SL + SL+ A E N++ + FP
Sbjct: 73 QSLSHLSTLILTGN----PIQSLALGAFSGLSSLQKLVAVETNLASL-------ENFPIG 121
Query: 171 SYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIF 215
L N+ + SF +P SNL+ LE L L NK+ I+
Sbjct: 122 HLKTLKELNVAHNLIQSFKLP-EYFSNLTNLEHLDLSSNKIQSIY 165
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 19/105 (18%)
Query: 118 KKLSSMAVMYLENNQLRGPIPSL-------VGSLEFFSAYEANISGTIPDFIGTDTFPQL 170
+ LS ++ + L N PI SL + SL+ A E N++ + FP
Sbjct: 74 QSLSHLSTLILTGN----PIQSLALGAFSGLSSLQKLVAVETNLASL-------ENFPIG 122
Query: 171 SYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIF 215
L N+ + SF +P SNL+ LE L L NK+ I+
Sbjct: 123 HLKTLKELNVAHNLIQSFKLP-EYFSNLTNLEHLDLSSNKIQSIY 166
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 19/105 (18%)
Query: 118 KKLSSMAVMYLENNQLRGPIPSL-------VGSLEFFSAYEANISGTIPDFIGTDTFPQL 170
+ LS ++ + L N PI SL + SL+ A E N++ + FP
Sbjct: 74 QSLSHLSTLILTGN----PIQSLALGAFSGLSSLQKLVAVETNLASL-------ENFPIG 122
Query: 171 SYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIF 215
L N+ + SF +P SNL+ LE L L NK+ I+
Sbjct: 123 HLKTLKELNVAHNLIQSFKLP-EYFSNLTNLEHLDLSSNKIQSIY 166
>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
Length = 279
Score = 28.9 bits (63), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 19/105 (18%)
Query: 118 KKLSSMAVMYLENNQLRGPIPSL-------VGSLEFFSAYEANISGTIPDFIGTDTFPQL 170
+ LS ++ + L N PI SL + SL+ A E N++ + FP
Sbjct: 75 QSLSHLSTLILTGN----PIQSLALGAFSGLSSLQKLVALETNLASL-------ENFPIG 123
Query: 171 SYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIF 215
L N+ + SF +P SNL+ LE L L NK+ I+
Sbjct: 124 HLKTLKELNVAHNLIQSFKLP-EYFSNLTNLEHLDLSSNKIQSIY 167
>pdb|2PZK|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme
Wbmg In Complex With Nad
pdb|2PZK|B Chain B, Crystal Structure Of The Bordetella Bronchiseptica Enzyme
Wbmg In Complex With Nad
pdb|2PZL|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme
Wbmg In Complex With Nad And Udp
pdb|2PZL|B Chain B, Crystal Structure Of The Bordetella Bronchiseptica Enzyme
Wbmg In Complex With Nad And Udp
pdb|2PZM|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme
Wbmg In Complex With Nad And Udp
pdb|2PZM|B Chain B, Crystal Structure Of The Bordetella Bronchiseptica Enzyme
Wbmg In Complex With Nad And Udp
Length = 330
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 192 FADISNLSTLEDLSLGHNKLTGIFPVSSFNNH 223
F D+S+ + DLSL + TG+F VS+ H
Sbjct: 218 FLDMSDFLAIADLSLQEGRPTGVFNVSTGEGH 249
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITA-KVDVY 555
N+ LD ++++ADFG K L G+ Y APE + +VDV+
Sbjct: 143 NLLLDADM--NIKIADFGFSNEFTFGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVW 197
Query: 556 SFGMILMDLITG 567
S G+IL L++G
Sbjct: 198 SLGVILYTLVSG 209
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITA-KVDVY 555
N+ LD ++++ADFG K L G+ Y APE + +VDV+
Sbjct: 143 NLLLDADM--NIKIADFGFSNEFTFGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVW 197
Query: 556 SFGMILMDLITG 567
S G+IL L++G
Sbjct: 198 SLGVILYTLVSG 209
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITA-KVDVY 555
N+ LD ++++ADFG K L G+ Y APE + +VDV+
Sbjct: 143 NLLLDADM--NIKIADFGFSNEFTFGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVW 197
Query: 556 SFGMILMDLITG 567
S G+IL L++G
Sbjct: 198 SLGVILYTLVSG 209
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.137 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,576,015
Number of Sequences: 62578
Number of extensions: 789546
Number of successful extensions: 3165
Number of sequences better than 100.0: 820
Number of HSP's better than 100.0 without gapping: 261
Number of HSP's successfully gapped in prelim test: 559
Number of HSP's that attempted gapping in prelim test: 2493
Number of HSP's gapped (non-prelim): 1071
length of query: 631
length of database: 14,973,337
effective HSP length: 105
effective length of query: 526
effective length of database: 8,402,647
effective search space: 4419792322
effective search space used: 4419792322
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)